BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781094|ref|YP_003065507.1| glycyl-tRNA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] (702 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|241203330|ref|YP_002974426.1| glycyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857220|gb|ACS54887.1| glycyl-tRNA synthetase, beta subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 704 Score = 728 bits (1879), Expect = 0.0, Method: Composition-based stats. Identities = 378/702 (53%), Positives = 493/702 (70%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVSDVMPGIIRDFPWPKSMRWGKASSKPGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ D Y +LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEAITVRRFDDYAANLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV-L 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + G L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRPQGGETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQASDGG IV GN +VV ARL DALHFWKRDQ NLP+L +L+ SA KF L Sbjct: 301 SNKFILVSNIQASDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLEASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L K++A + AD AL+DRA VL+K Sbjct: 361 DLKKPLDQRMAKLDALDVTFHAKLGTQGARVARIRTLAKELADITGADAALIDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YAVLQ E+ S AIE+H KP+GP + VP ++++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAVLQGEDASVAAAIEDHYKPQGPSDRVPEDRVAITIAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTLI FWAI+EKP+GSKDP+ALRRA LG++RI+LE +I +PL +D +L+ FFH Sbjct: 481 ADKLDTLIGFWAIDEKPTGSKDPFALRRAALGVVRILLERRIRLPLLATTKDGDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ RHDLI+A+L + D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARHDLIDAVLTSDADDLLMVARRVEALTAFITSEDGKNLLSGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +SP L L+AEK L+A IS +++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSPALLTLDAEKELFAAISGASKDASDAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEDVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|327190722|gb|EGE57803.1| glycyl-tRNA synthetase protein, beta subunit [Rhizobium etli CNPAF512] Length = 704 Score = 728 bits (1879), Expect = 0.0, Method: Composition-based stats. Identities = 376/702 (53%), Positives = 490/702 (69%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVAEVMPGIIRDFPWPKSMRWGKASSKSGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ D Y LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGIIASNITYGHRFHAPEAITVRRFDDYAASLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + EG L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRRQGEGTL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQA DGG IV GN +VV ARL DALHFWKRDQ NLP+L +L SA KF L Sbjct: 301 SNRFILVSNIQAHDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLGASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L K++A + AD AL DRA VL+K Sbjct: 361 DLKKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAKELAAITGADPALTDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YAVLQ EN S A+E+H KP+GP + VP +K++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAVLQGENASVAAAVEDHYKPQGPSDRVPEDKVAITLAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL FWAI+EKP+GSKDP+ALRRA LG++RI+LE ++ +PL D +L+ FFH Sbjct: 481 ADKLDTLTGFWAIDEKPTGSKDPFALRRAALGVVRILLERRVRLPLLATTRDGDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ R+DLI+A+L P+ D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARYDLIDAVLTPDADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +SP L L+AEK L++ IS +++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSPALLKLDAEKELFSAISSASKDAADAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF++VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEEVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|86356536|ref|YP_468428.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli CFN 42] gi|123512853|sp|Q2KBT5|SYGB_RHIEC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|86280638|gb|ABC89701.1| glycyl-tRNA synthetase, beta subunit protein [Rhizobium etli CFN 42] Length = 704 Score = 727 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 379/702 (53%), Positives = 484/702 (68%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL +IS+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSISEAQVVNDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVAEVMPGIIRDFPWPKSMRWGKASSAPGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ D Y LE A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEAIMVRRFDDYAASLERAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + E L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRKQGEDTL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNI+ASDGG IV GN +VV ARL DALHFWKRDQ NLP+L +L SA KF L Sbjct: 301 SNRFILVSNIEASDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLAASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L +K+A + AD AL DRA VL+K Sbjct: 361 DLQKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAQKLAAVTGADAALTDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YA LQ EN S AIE+H KP+GP + VP +K++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAALQGENASVAAAIEDHYKPQGPSDRVPEDKVAITLAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL FWAI+EKP+GSKDP+ALRRA LG++RI+LE I +PL D +L+ FFH Sbjct: 481 ADKLDTLTGFWAIDEKPTGSKDPFALRRAALGVVRILLERGIRLPLLATTRDGDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ RHDLI+A+L PE D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARHDLIDAVLTPEADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +SP L+AEK L+A IS ++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSPALFKLDAEKELFAAISSASKDAANAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEDVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|116250725|ref|YP_766563.1| glycyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. viciae 3841] gi|229558570|sp|Q1MKQ6|SYGB_RHIL3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|115255373|emb|CAK06448.1| putative glycyl-tRNA synthetase beta chain [Rhizobium leguminosarum bv. viciae 3841] Length = 704 Score = 726 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 376/702 (53%), Positives = 492/702 (70%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVTDVMPGIIRDFPWPKSMRWGKASSKPGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP PI V+ D Y +LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEPITVRRFDDYAANLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV-L 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + G L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRPQGGETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQASDGG IV GN +VV ARL DALHFWKRDQ NLP+L +L SA KF L Sbjct: 301 SNKFILVSNIQASDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLTASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 D++KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L K++A + AD AL+DRA VL+K Sbjct: 361 DINKPLDQRMAKLDALDVTFHAKLGTQGARVARIRTLAKQLADITGADAALIDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YA LQ E+ S A+E+H KP+GP + VP ++++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAALQGEDASVAAALEDHYKPQGPSDRVPEDRVAITIAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTLI FWAI+EKP+GSKDP+ALRRA LG++RI+LE K+ +PL D +L+ FFH Sbjct: 481 ADKLDTLIGFWAIDEKPTGSKDPFALRRAALGVVRILLERKVRLPLLTTTRDIDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ RHDLI+A+L P+ D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARHDLIDAVLTPDADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +S L L+AEK L+A IS +++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSQALLKLDAEKELFAAISGASKDASDAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEDVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|190890601|ref|YP_001977143.1| glycyl-tRNA synthetase, beta subunit [Rhizobium etli CIAT 652] gi|238692499|sp|B3PRI2|SYGB_RHIE6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|190695880|gb|ACE89965.1| glycyl-tRNA synthetase protein, beta subunit [Rhizobium etli CIAT 652] Length = 704 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 376/702 (53%), Positives = 489/702 (69%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVAEVMPGIIRDFPWPKSMRWGKASSKSGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ D Y LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEAITVRRFDDYAASLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + E L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRKQGEDTL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQA DGG IV GN +VV ARL DALHFWKRDQ NLP+L +L SA KF L Sbjct: 301 SNRFILVSNIQAHDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLAASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L K++A + AD AL DRA VL+K Sbjct: 361 DLQKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAKELAAITGADPALTDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YAVLQ EN S A+E+H KP+GP + VP +K++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAVLQGENASVAAAVEDHYKPQGPSDRVPEDKVAITLAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL FWAI+EKP+GSKDP+ALRRA LG++RI+LE ++ +PL D +L+ FFH Sbjct: 481 ADKLDTLTGFWAIDEKPTGSKDPFALRRAALGVVRILLERRVRLPLLATTRDGDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ R+DLI+A+L P+ D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARYDLIDAVLTPDADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +SP L L+AEK L+A IS +++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSPALLKLDAEKELFAAISSASKDAADAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF++VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEEVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|319784744|ref|YP_004144220.1| glycyl-tRNA synthetase subunit beta [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170632|gb|ADV14170.1| glycyl-tRNA synthetase, beta subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 706 Score = 719 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 351/704 (49%), Positives = 473/704 (67%), Gaps = 3/704 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL +L L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLRKMLTDSLVEAGLTYEAAREYWTPRRLTLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++A+ GFLR GL +I++ + DPKKGD Y+A + KP R Sbjct: 61 ARSKDINEEIKGPSTSAPEQAVQGFLRKAGLSSIAEAHVHSDPKKGDFYVAHISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ +VP I+ PWPKSMRW + + + W+RPL+SILC E + +ID ++ Sbjct: 121 EQIIAELVPGIIRNFPWPKSMRWGPSSAKPGSLRWVRPLQSILCTFGPETEEPVVIDFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GNITYGHRFHAP I V+ D Y+ LE A V+LD + R+ IL DA LA A G Sbjct: 181 DGIRSGNITYGHRFHAPDAITVRRFDDYVSKLEAAKVVLDADRRKEIILADARNLAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EGV 298 L+LVED+ LLEE+ GLVEW V MG F++ +L +P E+IRLTI+ NQKCFVTR + + Sbjct: 241 LDLVEDEGLLEEVSGLVEWPVVLMGEFEEAFLAIPAEVIRLTIRANQKCFVTRPQGVDDA 300 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N FIL +NI+A DGG I GN +VV ARL DAL+FW DQ +LP+L+ L+ SA KF Sbjct: 301 LSNRFILTANIEARDGGKEIAHGNGKVVRARLSDALYFWTTDQGDLPDLAELEASAEKFG 360 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 LDL KPLDQRMARLD L V FHAK+GTQGERV RI+ L +++A ++ AD AL RA VL+ Sbjct: 361 LDLKKPLDQRMARLDHLGVTFHAKLGTQGERVERIKRLAEELAPIVGADPALARRAAVLA 420 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G++YA+LQ E+ S A EEH KP+GP + V ++ +SITV+ Sbjct: 421 KADLTTEVVGEFPELQGAMGRKYALLQGEHASVAAAAEEHYKPQGPSDRVSSDPVSITVA 480 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-EDQNLILF 537 LADKLD L+ FWAI+EKP+GSKDPYALRRA LG++RI++EN I + L+ + + +L+ F Sbjct: 481 LADKLDMLVGFWAIDEKPTGSKDPYALRRAALGVVRILVENDIRLALAAIVGKASDLLSF 540 Query: 538 FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 FHDRLK+YL D+ RHDLI+A++ P++D+LL IV ++ L F + G+ L KR Sbjct: 541 FHDRLKVYLRDQGARHDLIDAVITPQSDDLLQIVRRVEALGAFLDTEDGKNLLAGTKRAA 600 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 ILA EEKK ++ + P + EK L+A ++ E++ + + L + Sbjct: 601 NILAAEEKKKTAVAETVEPALFRADTEKSLFAAVNQAEKQAGEAIQNDDFSGALLALSVL 660 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 EP++ FF+ VLVN +D+ VR NRL+LL I+ V + +I Sbjct: 661 REPVDSFFEHVLVNDEDQAVRANRLALLARIRAATGQVADFSRI 704 >gi|13476182|ref|NP_107752.1| glycyl-tRNA synthetase subunit beta [Mesorhizobium loti MAFF303099] gi|25009337|sp|Q986B5|SYGB_RHILO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|14026942|dbj|BAB53538.1| glycyl-tRNA synthetase, beta chain [Mesorhizobium loti MAFF303099] Length = 718 Score = 719 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 353/716 (49%), Positives = 475/716 (66%), Gaps = 15/716 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL +L L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKMLTDGLVEAGLTYEAAREYWTPRRLTLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++A+ GFLR GL +++D + DPKKGD Y+A + KP R Sbjct: 61 ARSKDIREEIKGPSTTAPEQAVQGFLRKAGLSSVADAHVHSDPKKGDFYVAHISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ +VP I+ PWPKSMRW + + W+RPL+S+LC E + ++D ++ Sbjct: 121 EEIIAQLVPGIIRNFPWPKSMRWGPASAKPGSLRWVRPLQSVLCTFGPETEEPVVVDFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GNITYGHRF AP I V+ D Y+ LE A V+LD + R+ IL DA LA A G Sbjct: 181 DGIRSGNITYGHRFLAPGEITVRRFDDYVSKLEAAKVVLDADRRKEIILADARNLAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV-- 298 L+LVED+ LLEE+ GLVEW V MG F++ +L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 LDLVEDEGLLEEVSGLVEWPVVLMGEFEEAFLAIPAEVIRLTIRANQKCFVTRPQGEGEA 300 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N FIL SNI+A DGG I GN +VV ARL DAL+FW DQ +LP+L L+ SA KF Sbjct: 301 LSNRFILTSNIEARDGGKEIAHGNGKVVRARLSDALYFWTTDQGDLPDLGQLEASAEKFG 360 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 LDL+KPLDQRMARLD L+V FHAK+GTQGERV RIR L +++A + AD L RA VL+ Sbjct: 361 LDLNKPLDQRMARLDHLNVTFHAKLGTQGERVERIRRLAEELAPTVGADPVLAARAAVLA 420 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G++YA+LQ E+ S AIEEH KP+GP + VP++ +S+ V+ Sbjct: 421 KADLQTEVVGEFPELQGAMGRKYALLQGEHPSVAAAIEEHYKPQGPSDYVPSDPVSVAVA 480 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--------- 529 LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG++RI++E++I + LS Sbjct: 481 LADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVVRILVEDRIQLRLSSIFASAGACYAG 540 Query: 530 ----EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + ++L+ FFHDRLK+YL D+ RHDLI+A++ P++D+LL IV ++ L F + Sbjct: 541 SGADQTRDLLAFFHDRLKVYLRDQGARHDLIDAVITPQSDDLLQIVRRVEALGSFLDTED 600 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L KR ILA EEKK ++ + P AEK L+A ++ E++ ++ Sbjct: 601 GKNLLAGTKRAANILAAEEKKKTAVAKTVEPALFKENAEKSLFAAVNQAEKQAGEAIQNE 660 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ EP++ FF+ VLVN +D EVR NRL+LL I+ V + KI Sbjct: 661 DFSAAMLALSALREPVDSFFEGVLVNDEDLEVRANRLALLTRIRAATGQVADFSKI 716 >gi|222085067|ref|YP_002543597.1| glycyl-tRNA synthetase [Agrobacterium radiobacter K84] gi|221722515|gb|ACM25671.1| glycyl-tRNA synthetase [Agrobacterium radiobacter K84] Length = 742 Score = 717 bits (1852), Expect = 0.0, Method: Composition-based stats. Identities = 366/740 (49%), Positives = 494/740 (66%), Gaps = 39/740 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ +R+YWTP RL L ++G++ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGVREYWTPRRLTLDIRGVT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q++ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVQSDPKKGDFYVAVISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW + + W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVADVMPWIIRDFPWPKSMRWGKASAKPGSLRWVRPLQSIVCTFGTEHEETVVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N+TYGHRFHAP PI V+ D Y+ L++A V+LD E R++ IL+DA +A A G Sbjct: 181 DGIVASNVTYGHRFHAPGPITVKRFDDYVSSLDKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE---- 296 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR ++ Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRRQDSHLP 300 Query: 297 -----------------------------------GVLANCFILVSNIQASDGGAAIVQG 321 G L+N FILVSNIQA+DGG I+ G Sbjct: 301 LNGGGRSEAAGGGDPLLQQNHPTPALRANPPPQGEGALSNRFILVSNIQATDGGKEIIHG 360 Query: 322 NSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHA 381 N +VV ARL DALHFWKRDQ +LP+L +L+ SA KF LDL KPLDQRMA+LD L+V FHA Sbjct: 361 NGKVVRARLSDALHFWKRDQGDLPDLETLEASAAKFGLDLKKPLDQRMAKLDALNVTFHA 420 Query: 382 KIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEY 441 K+G+QGERV+RIR L ++A++ AD VDRA VL+KADL TE V EFPELQG +G++Y Sbjct: 421 KLGSQGERVARIRTLAAELAKITGADPLKVDRAAVLAKADLRTEAVGEFPELQGLMGRKY 480 Query: 442 AVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKD 501 A LQ E+ S AIE+H KP+GP + VP +K++ITV+LADKLDTL+ FWAI+EKP+GSKD Sbjct: 481 AALQGEDASVAAAIEDHYKPQGPSDRVPDDKVAITVALADKLDTLMGFWAIDEKPTGSKD 540 Query: 502 PYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 PYALRRA LG++RI+LE K+ +PL +D +L+ FFHDRLK+YL D+ R+DLI+++L Sbjct: 541 PYALRRAALGVVRILLERKVRLPLLAVTKDADLLAFFHDRLKVYLRDQGARYDLIDSVLT 600 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 PE D+LL + ++ L F +S G+ L KR Q+LA EEKK ++ +S L L Sbjct: 601 PEADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQLLAAEEKKGTAVADGVSESLLTL 660 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 +AEK L+A ++ ++ + + L ++ P++ FF VLVN +D +R NR Sbjct: 661 DAEKDLFAAVTKASAEAANAIVGEDFRSAMAALSTLRAPVDRFFGDVLVNDEDAAIRANR 720 Query: 682 LSLLQYIKNIILIVINVQKI 701 L+LL+ I+ V + KI Sbjct: 721 LALLRLIREATGTVADFSKI 740 >gi|325292025|ref|YP_004277889.1| glycyl-tRNA synthetase beta chain [Agrobacterium sp. H13-3] gi|325059878|gb|ADY63569.1| glycyl-tRNA synthetase beta chain [Agrobacterium sp. H13-3] Length = 717 Score = 716 bits (1848), Expect = 0.0, Method: Composition-based stats. Identities = 369/715 (51%), Positives = 494/715 (69%), Gaps = 14/715 (1%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVERGLTYEGAREYWTPRRLTLDIRGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE+ GPR A +KAI+GFLR GL +S+ Q+ DPKKGD Y+A++ KP R Sbjct: 61 ARSADVREEKKGPRTDANEKAIEGFLRGAGLNDVSEAQVVSDPKKGDFYIAIINKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA------------FSWIRPLKSILCILVA 168 E+++ ++P I+ PWPKSMR P + W+RPL+SI+C+ Sbjct: 121 EEIIAEVMPGIIRSFPWPKSMRSGPASMPKGSSYAGIEGKGSESLRWVRPLQSIVCLFGP 180 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E + ++I + I GN+TYGHRFHAP PI V+ + Y+ LE+A V+LD + R++ I Sbjct: 181 EHDETQVIPFVIDGIVAGNVTYGHRFHAPGPITVRRFEDYVSSLEKAKVILDADRRKDII 240 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L+DA LA A GLELVED+ LLEE+ GLVEW QV MG+F++ YL +P E+IRLTIKTNQK Sbjct: 241 LHDAKDLAFANGLELVEDEGLLEEVSGLVEWPQVLMGTFEEDYLQIPAEIIRLTIKTNQK 300 Query: 289 CFVTRTR--EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 CFVTR + E L+N FIL+SNI+ASDGG I+ GN +VV ARL DA HFW RDQ +LP+ Sbjct: 301 CFVTRNQGAEEGLSNRFILISNIEASDGGKEIIHGNGKVVRARLSDARHFWNRDQGDLPD 360 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 L +LK+SA KF LDL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR L K +A ++ A Sbjct: 361 LETLKDSAAKFGLDLKKPLDQRMAKLDALNVTFHAKLGTQGERVARIRELAKALAAVVGA 420 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 D ALVDRA+VL+KADL TE V EFPELQG +G++YA LQ EN S AIE+H KP+GP + Sbjct: 421 DAALVDRAVVLAKADLRTEAVGEFPELQGLMGRKYATLQGENESVAAAIEDHYKPQGPSD 480 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P +K++ITV+LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG++RI+LE + +PL Sbjct: 481 RLPADKVAITVALADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVVRILLEKNVRLPLL 540 Query: 527 QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 +D +L+ FFHDRLK+YL D R+DLI+A+L PE+D+LL I ++ L F + G Sbjct: 541 SVAKDTDLLSFFHDRLKVYLRDLGARYDLIDAVLTPESDDLLMIARRVEALTAFITGEDG 600 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 L AKR Q+LA EEKK ++ +S + L L+AEK LYA I ++++ + Sbjct: 601 RNLLAGAKRATQLLAAEEKKGTVVANSVSEELLKLDAEKALYAAIKTASADAAKAVETED 660 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 FRSAMQALSTLRAPVDKFFEDVLVNDEDAAIRANRLALLKAIREATGTVADFSKI 715 >gi|15887985|ref|NP_353666.1| glycyl-tRNA synthetase subunit beta [Agrobacterium tumefaciens str. C58] gi|229470693|sp|A9CK39|SYGB_AGRT5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|15155593|gb|AAK86451.1| glycyl-tRNA synthetase, beta chain [Agrobacterium tumefaciens str. C58] Length = 717 Score = 715 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 372/715 (52%), Positives = 496/715 (69%), Gaps = 14/715 (1%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVERGLTYEGAREYWTPRRLTLDIRGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE+ GPR A +KAI+GFLR GL IS+ Q+ DPKKGD Y+A++ KP R Sbjct: 61 ARSADVREEKKGPRTDANEKAIEGFLRGAGLNDISEAQVVSDPKKGDFYIAIINKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA------------FSWIRPLKSILCILVA 168 E+++ ++P I+ PWPKSMR P + W+RPL+SI+C+ Sbjct: 121 EEIIAEVMPGIIRSFPWPKSMRSGPASMPKGSSYAGIEGKGSESLRWVRPLQSIVCLFGP 180 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E + ++I + I GNITYGHRFHAP PI V+ + Y+ +LE+A V+LD + R++ I Sbjct: 181 EHDETQVIPFVIDGIVAGNITYGHRFHAPGPITVRRFEDYVSNLEKAKVILDADRRKDII 240 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L+DA LA A GLELVED+ LLEE+ GLVEW QV MG+F++ YL +P E+IRLTIKTNQK Sbjct: 241 LHDAKDLAFANGLELVEDEGLLEEVSGLVEWPQVLMGTFEEDYLQIPAEIIRLTIKTNQK 300 Query: 289 CFVTRTR--EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 CFVTR + E L+N FIL+SNI+ASDGG I+ GN +VV ARL DA HFW RDQ +LP+ Sbjct: 301 CFVTRNQGAEEGLSNRFILISNIEASDGGKEIIHGNGKVVRARLSDARHFWNRDQGDLPD 360 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 L +LK+SA KF+LDL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR L K +A ++ A Sbjct: 361 LETLKDSAAKFDLDLKKPLDQRMAKLDALNVTFHAKLGTQGERVARIRELAKALAPVVGA 420 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 D ALVDRA+VL+KADL TE V EFPELQG +G++YAVLQ EN S AIE+H KP+GP + Sbjct: 421 DGALVDRAVVLAKADLRTEAVGEFPELQGLMGRKYAVLQGENESVAAAIEDHYKPQGPSD 480 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P +K++ITV+LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG++RI+LE + +PL Sbjct: 481 RLPADKVAITVALADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVVRILLEKNVRLPLL 540 Query: 527 QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 D +L+ FFHDRLK+YL D R+DLI+A+L PE+D+LL I ++ L F + G Sbjct: 541 SVARDSDLLSFFHDRLKVYLRDLGARYDLIDAVLTPESDDLLMIARRVEALTAFITGEDG 600 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 L AKR Q+LA EEKK ++ +S + L L+AEK LYA I ++++ + Sbjct: 601 RNLLAGAKRATQLLAAEEKKGTVVADGVSEELLKLDAEKALYAAIKTASADAAKAVEGED 660 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 FRSAMQALSTLRAPVDKFFEDVLVNDEDAAIRANRLALLKAIREATGTVADFSKI 715 >gi|209548144|ref|YP_002280061.1| glycyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533900|gb|ACI53835.1| glycyl-tRNA synthetase, beta subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 727 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 374/725 (51%), Positives = 483/725 (66%), Gaps = 24/725 (3%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVAEVMPGIIRDFPWPKSMRWGKASSRPGAMRWVRPLQSIVCTFGPEHEETVVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N TYGHRFHAP I V+ D Y LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNTTYGHRFHAPEAITVRRFDDYAASLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + E L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRKQGEETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQA DGG IV GN +VV ARL DALHFWKRDQ +LP+L +L SA KF L Sbjct: 301 SNKFILVSNIQAHDGGKEIVHGNGKVVRARLSDALHFWKRDQGDLPDLETLTASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L +++A++ AD AL DRA VL+K Sbjct: 361 DLKKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAEELAKITGADAALTDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YA LQ EN S AIE+H KP+GP + VP +K++ITV+L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAGLQGENGSVAAAIEDHYKPQGPSDRVPADKVAITVAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-------------- 525 ADKLDTLI FWAI EKP+GSKDP+ALRRA LG++RI+LE + +PL Sbjct: 481 ADKLDTLIGFWAIGEKPTGSKDPFALRRAALGVVRILLERNVRLPLLTIMSQTSLLAKTG 540 Query: 526 ---------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +L+ FFHDRLK+YL D+ RHDLI+A+L + D+LL + ++ Sbjct: 541 GDTVFAFAGDPAETFFDLLSFFHDRLKVYLRDQGARHDLIDAVLTSDADDLLMVARRVEA 600 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L F +S G+ L KR Q+LA EEKK I+ +SP L L+AEK L+A IS Sbjct: 601 LTAFITSEDGKNLLAGTKRATQLLAAEEKKGTVIADAVSPALLKLDAEKELFAAISGASK 660 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +++ + + L + P++ FF+ VLVN +D +R NRL+LL+ I+ V Sbjct: 661 EAADAVASEDFRSAMAALSKLRGPVDRFFEDVLVNDEDAAIRANRLALLRLIREATGTVA 720 Query: 697 NVQKI 701 + KI Sbjct: 721 DFSKI 725 >gi|110633071|ref|YP_673279.1| glycyl-tRNA synthetase subunit beta [Mesorhizobium sp. BNC1] gi|110284055|gb|ABG62114.1| glycyl-tRNA synthetase beta chain [Chelativorans sp. BNC1] Length = 789 Score = 711 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 348/759 (45%), Positives = 473/759 (62%), Gaps = 58/759 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ +YWTP RL L ++G++ Sbjct: 29 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDGLVEAGLTYEAATEYWTPRRLALDIRGVT 88 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++AI GFLR GL I+ + DPKKG Y+AV+ K R Sbjct: 89 ARSRDVREEIKGPSTSAPEQAIQGFLRKAGLTDIAQAHVHTDPKKGGFYVAVIEKNGRPA 148 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW + W+RPL+SI+C E + ++D ++ Sbjct: 149 EEIIAELMPAVIRNFPWPKSMRWGKASRNPGSLRWVRPLQSIVCTFGPETEEPVVVDFEI 208 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN+TYGHRFHAP I V+ D Y+ LE+A V+LD E R+ IL+DA LA A G Sbjct: 209 DGIRAGNVTYGHRFHAPEAITVRRFDDYVEKLEQAKVVLDAERRKRIILDDAKNLAFANG 268 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--GV 298 LELVED+ LLEE+ GLVE+ V MG F++ YL +P E++RLTI+ NQKCFVTR + Sbjct: 269 LELVEDEGLLEEVSGLVEYPVVLMGEFEEAYLEIPAEVVRLTIRANQKCFVTRPQGELEK 328 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N FI+ +NI+A+DGG I GN +VV ARL DAL+FWK DQ +LP++ LK SA KF Sbjct: 329 LSNRFIITANIEATDGGKEIAYGNGKVVRARLSDALYFWKTDQADLPDIDRLKGSAEKFG 388 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 LDL+KPLDQRMARL+ L+V FHAK+GTQGERV RIR L +++A ++ AD L +RA VL+ Sbjct: 389 LDLNKPLDQRMARLEHLNVTFHAKLGTQGERVERIRRLARELAPIVGADPDLAERAAVLA 448 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G++YA LQ E+ S A+EEH KP GP + VPT+ +S+ V+ Sbjct: 449 KADLTTEVVGEFPELQGAMGRKYAELQGEHPSVARALEEHYKPLGPSDIVPTDPVSVAVA 508 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--------- 529 LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRI++EN + + L + Sbjct: 509 LADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIVVENGVRLALLKAFRKARNVSAE 568 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-------------------------- 563 ++L+ FFHDRLK+YL D+ RHDLI+A+L Sbjct: 569 NTEDLLSFFHDRLKVYLRDQGARHDLIDAVLASGRPISPLEGEMSPKATEGGAVPPTSQS 628 Query: 564 ---------------------NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 ND+LL IV ++ L++ + G+ L KR ILA Sbjct: 629 VTPPSALPGISPSRGEITPSSNDDLLLIVRRVEALSDLLGTETGQNLLAGTKRAANILAA 688 Query: 603 EEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIE 662 EEKK I+ + P L E E RL++ ++ E++ + + L ++ EPI+ Sbjct: 689 EEKKGTRIAEAVDPALLKEEQEIRLFSAVNQAEKEAGEAIQKQDFSAAMTALAALREPID 748 Query: 663 IFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FF++VLVN ++ +R NRL+LLQ I+ V + KI Sbjct: 749 SFFEKVLVNDENDSIRANRLALLQRIREATGRVADFSKI 787 >gi|114705267|ref|ZP_01438175.1| glycyl-tRNA synthetase beta subunit [Fulvimarina pelagi HTCC2506] gi|114540052|gb|EAU43172.1| glycyl-tRNA synthetase beta subunit [Fulvimarina pelagi HTCC2506] Length = 759 Score = 701 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 347/757 (45%), Positives = 453/757 (59%), Gaps = 56/757 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++G+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLTYEGAREYWTPRRLTLDVRGVD 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPR A +KAI GFLR GL +I + + + DPKKGD Y+AV+RKP R Sbjct: 61 ASSKNVNEERKGPRTDAPEKAIQGFLRGAGLSSIEEAETRSDPKKGDFYVAVIRKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ ++P I+ PWPKSMRW + W+RPL+SILC E + ++D ++ Sbjct: 121 EQIIAEVMPGIIRNFPWPKSMRWGPASREPGSMRWVRPLQSILCTFGPETEEPVVVDFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRFHAP V+ D Y+ LE+A V+LD E R+ I DA A A+G Sbjct: 181 SGIRSGNTTVGHRFHAPESFMVRRFDDYVDKLEKAHVILDAERRKEMIRTDAENRAFALG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT------ 294 LE+V D+ LLEE+ GLVEW V MGSFD+ +L +P E+I+LTIK NQKCFVTR Sbjct: 241 LEVVPDEGLLEEVSGLVEWPVVLMGSFDEAFLAIPPEVIQLTIKVNQKCFVTRPVGSEPQ 300 Query: 295 -------------------------REGVLANCFILVSNIQASDGGAAIVQGNSRVVAAR 329 L+N F+L+SNI+ASDGG I +GN +VV AR Sbjct: 301 ARKAERPSPGQGAPAEPSAQQTGVSENNRLSNHFVLISNIEASDGGEEIARGNGKVVRAR 360 Query: 330 LEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGER 389 L DAL+FWK DQ +LP+L SL+ SA KF LDL+KPLDQRMA+LD V FHAK+GTQGER Sbjct: 361 LSDALYFWKTDQADLPDLKSLEPSAEKFGLDLTKPLDQRMAKLDAQGVTFHAKLGTQGER 420 Query: 390 VSRIR------------------VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 V RI V + A + V RA VLSKADL TE V EFP Sbjct: 421 VQRIAALAEAIAGEIAAQVTGNGVATSEDAFAAGELRSTVRRAAVLSKADLPTEAVGEFP 480 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 ELQG +G+ YA LQ E+ S AIEEH KP GP + VP + ++I V+LADKLD L+ FWA Sbjct: 481 ELQGLMGRYYAKLQGEHPSVQAAIEEHYKPLGPGDQVPRDPVAICVALADKLDMLVGFWA 540 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDI 551 I+EKP+GSKDPYALRRA LG+IRI+++N++ + F +L+ FFHDRL + L D Sbjct: 541 IDEKPTGSKDPYALRRAALGVIRILVDNRLVLKFGNFDVSSDLLAFFHDRLMVQLRDSGA 600 Query: 552 RHDLIEAILRP----ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN 607 RHDL++A+L ND+LL I ++ L +F + G+ L +R ILA EEKK Sbjct: 601 RHDLVDAVLSGSGEQSNDDLLDITRRVEALGQFLGAEDGQNLLAGYRRAANILAAEEKKG 660 Query: 608 REISLEISPQYLL---LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIF 664 I+ + ++ EK L I + E+++ + Y Q L + P++ F Sbjct: 661 TTIAASVDADWIAAKGEHEEKVLAGAIDRAEIEVAEALETRDYGQAMAGLSKLRAPVDSF 720 Query: 665 FDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FDKVLVNAEDETVRANRLALLARIRAACEKVADFSKI 757 >gi|222147719|ref|YP_002548676.1| glycyl-tRNA synthetase subunit beta [Agrobacterium vitis S4] gi|221734707|gb|ACM35670.1| glycyl-tRNA synthetase beta chain [Agrobacterium vitis S4] Length = 764 Score = 701 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 367/762 (48%), Positives = 481/762 (63%), Gaps = 61/762 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L + G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVDAGLTYEGAREYWTPRRLVLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE+ GP V A +KAI+GFLR GL +I +K DPKKGD Y+A++ KP R Sbjct: 61 ARSADVKEEKKGPSVSAPEKAIEGFLRGAGLASIDQAVVKTDPKKGDFYVAMIDKPGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA------------FSWIRPLKSILCILVA 168 E+++ +P I+ PWPKSMR P + W+RPL+SILC + Sbjct: 121 EEIITEAMPGIIRSFPWPKSMRSGAASMPKGSRYGGIEGKGSESLRWVRPLQSILCTFGS 180 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E + II D+ I NITYGHRFHAP I V+ D Y+ LE+A V+LD E R++ I Sbjct: 181 EHDEVAIIPFDIDGITASNITYGHRFHAPEAITVRRFDDYVSSLEKAKVILDAERRKDII 240 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L+DA +A A GL+LVED+ LLEE+ GLVE+ QV +G+F+ YL +P E+IRLTIKTNQK Sbjct: 241 LHDARDVAFANGLDLVEDEGLLEEVSGLVEYPQVLLGTFEADYLSIPSEIIRLTIKTNQK 300 Query: 289 CFVTRT--REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 CFVTR L+N FIL+SNI A DGGA I+ GN +VV ARL DALHFWKRDQ NLP+ Sbjct: 301 CFVTRPIGESEKLSNHFILISNIAAHDGGAEIIHGNGKVVRARLSDALHFWKRDQGNLPD 360 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 L +L+ SA KF LDL KPLDQRMA+LD L+V FHAK+G+QGERV+RIR L K +A ++ A Sbjct: 361 LETLEASAAKFGLDLKKPLDQRMAKLDALNVTFHAKLGSQGERVARIRDLAKVLAPVVGA 420 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 D ALVDRA+VL+KADL TE V EFPELQG +G++YA LQ E+ S AIE+H KP+GP + Sbjct: 421 DEALVDRAVVLAKADLRTEAVGEFPELQGLMGRKYATLQGEHESVAAAIEDHYKPQGPSD 480 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P +K++ITV+LADKLDTL+ FWAINEKP+GSKDP+ALRRA LG +RI+LE I + L Sbjct: 481 RLPEDKVAITVALADKLDTLVWFWAINEKPTGSKDPFALRRAALGDVRILLEKNIRLSLL 540 Query: 527 QFIEDQ-----------------------------------------------NLILFFH 539 +L+ FFH Sbjct: 541 DVFAHSLLGRSLTSEEIERIIDAAIYESVAGGAPKDSTSSKYSQEFASVFLGGSLLSFFH 600 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ RHD+I+A+L PE D+LL + + L F +S G+ L KR Q+ Sbjct: 601 DRLKVYLRDQGARHDIIDAVLTPEADDLLMVARRAEALTAFITSEDGKNLLAGTKRATQL 660 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK ++ +S L L+AEK LYA I E++ + + L ++ Sbjct: 661 LAAEEKKGTVVADGVSEALLTLDAEKALYAAIVQATQSAAEAVAKEDFRSAMQALSTLRA 720 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 721 PVDTFFEDVLVNDEDAAIRANRLALLKAIREATGTVADFSKI 762 >gi|150395691|ref|YP_001326158.1| glycyl-tRNA synthetase subunit beta [Sinorhizobium medicae WSM419] gi|229558576|sp|A6U6P3|SYGB_SINMW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|150027206|gb|ABR59323.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium medicae WSM419] Length = 721 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 360/719 (50%), Positives = 480/719 (66%), Gaps = 18/719 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLIELRSEEIPARMQRKAAGDLKKLVTDALVEAGLTYEGAREYWTPRRLTLDIRGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR+ A KAI+GFLR+ GL +IS+ + DPKKGD Y+A + + R Sbjct: 61 ARSADMREERKGPRIDANDKAIEGFLRAAGLSSISEAHVHNDPKKGDFYVAHIVRRGREA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMR + + W+RPL+SI+C AE + K+I ++ Sbjct: 121 EEIVADVMPAIIRDFPWPKSMRSGAASAIPGSLRWVRPLQSIVCTFGAEHDETKVIPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ Y L +A V++D E R+ I DAH +A A G Sbjct: 181 DGIVASNITYGHRFHAPEAIAVRRFADYAEKLGKAKVVIDAERRKEIISADAHNIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV-L 299 LELVED+ LLEE+ GLVEW +V MGSF++ YL +P E+IRLTIKTNQKCFVTR L Sbjct: 241 LELVEDEGLLEEVAGLVEWPKVLMGSFEESYLAIPSEIIRLTIKTNQKCFVTRKPGAETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNI+A DGG IV GN +VV ARL DA HFWKRDQ +LP+L +L SA KF L Sbjct: 301 SNRFILVSNIEAKDGGKEIVHGNGKVVRARLSDAAHFWKRDQGDLPDLETLAASAGKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR L +A++ AD A V RA VL+K Sbjct: 361 DLKKPLDQRMAKLDALNVTFHAKLGTQGERVARIRSLAAALAKITGADPASVARAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G +YAVLQ E+ + +AIE+H KP+GP ++VPT+ +S++V+L Sbjct: 421 ADLRTEAVGEFPELQGIMGHKYAVLQGESAAVANAIEDHYKPQGPSDHVPTDPVSVSVAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLDTL+ FWAI+E+P+GSKDPYALRRA LG+IR+ILE + +PL + Sbjct: 481 ADKLDTLVGFWAIDERPTGSKDPYALRRAALGVIRLILEGRARLPLLPCFDVALASLKLQ 540 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 +L+ FFHDRLK+YL D RHDLI+A+L P+ D+LL I ++ L F + Sbjct: 541 RPAMAADVSGDLLAFFHDRLKVYLRDLGARHDLIDAVLAPDADDLLMIARRVEALTAFIT 600 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + +G L KR QILA EEKK E++ + + L+AE+ LYA I + ++ Sbjct: 601 AEEGRNLLAGTKRATQILAAEEKKGTEVAASVDEELFRLDAERLLYASIKVASDGARAAI 660 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + L + EP++ FF+ VLVN +D+ +R NRL+LL I++ V + KI Sbjct: 661 AKEDFRSAMEALSKLREPVDAFFNDVLVNDEDKAIRANRLALLGLIRSATGEVADFSKI 719 >gi|15964608|ref|NP_384961.1| glycyl-tRNA synthetase subunit beta [Sinorhizobium meliloti 1021] gi|307309354|ref|ZP_07589017.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti BL225C] gi|307320090|ref|ZP_07599511.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti AK83] gi|81854356|sp|Q92RL2|SYGB_RHIME RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|15073786|emb|CAC45427.1| Probable glycyl-tRNA synthetase beta chain [Sinorhizobium meliloti 1021] gi|306894305|gb|EFN25070.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti AK83] gi|306900223|gb|EFN30841.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti BL225C] Length = 721 Score = 699 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 363/719 (50%), Positives = 479/719 (66%), Gaps = 18/719 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLIELRSEEIPARMQRKAAGDLKKLVTDALVEAGLTYEGAREYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR+ A +KAI+GFLR+ GL ++S+ + DPKKGD Y+A + KP R Sbjct: 61 ARSADLREERKGPRIDANEKAIEGFLRAAGLSSLSEAHVHNDPKKGDFYVAHIVKPGREA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMR + + W+RPL+SI+C AE + K+I ++ Sbjct: 121 EEIIADVMPAIIRDFPWPKSMRSGAASAKPGSLRWVRPLQSIVCTFGAEHDETKVIPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ Y LE+A V++D E R+ I DAH +A A G Sbjct: 181 DGIVASNITYGHRFHAPEAITVRRFADYAEKLEKAKVVIDAERRKEIISADAHNVAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV-L 299 LELVED+ LLEE+ GLVEW +V MGSF++ YL +P E+IRLTIKTNQKCFVTR L Sbjct: 241 LELVEDEGLLEEVAGLVEWPRVLMGSFEESYLEIPSEIIRLTIKTNQKCFVTRKPGAETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNI+A DGG I GN +VV ARL DA HFWKRDQ++LP+L +L SA KF L Sbjct: 301 SNRFILVSNIEAKDGGKEIAHGNGKVVRARLSDAAHFWKRDQSDLPDLETLTASAEKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR L +A+L AD A VDRA+VL+K Sbjct: 361 DLKKPLDQRMAKLDALNVTFHAKLGTQGERVARIRSLAAALARLTGADAASVDRAVVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G +YAVLQ E + DAIE+H KP+GP + VPT+ +S TV+L Sbjct: 421 ADLRTEAVGEFPELQGIMGHKYAVLQGEAAAVADAIEDHYKPQGPSDRVPTDPVSATVAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR+ILE +PL + Sbjct: 481 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLILEGSARLPLLPCFDVALAALKAQ 540 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 +L+ FFHDRLK+YL D R+DLI+A+L P+ D+LL I ++ L F + Sbjct: 541 RPDIRAEISADLLAFFHDRLKVYLRDLGARYDLIDAVLAPDADDLLMIARRVEALTAFIT 600 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + +G L KR QILA EEKK E++ + L+AE+ L+A I ++++ Sbjct: 601 AEEGRNLLTGTKRATQILAAEEKKGTEVAESVDEALFRLDAERTLHASIKVASDDARDAI 660 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L + P++ FF+ VLVN +D+ +R NRL+LL I++ V + KI Sbjct: 661 VKEDFRSAMQALSKLRAPVDDFFNDVLVNDEDKAIRANRLALLGLIRSATGEVADFSKI 719 >gi|298293954|ref|YP_003695893.1| glycyl-tRNA synthetase subunit beta [Starkeya novella DSM 506] gi|296930465|gb|ADH91274.1| glycyl-tRNA synthetase, beta subunit [Starkeya novella DSM 506] Length = 687 Score = 698 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 311/704 (44%), Positives = 443/704 (62%), Gaps = 22/704 (3%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ AAE+L ++ L E G++Y+ + + TP RL L + GL Sbjct: 1 MPDLLLELFSEEIPARMQAGAAENLRKLVTDALVERGLLYEGAKAFVTPRRLALAIHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 H P+ EER GPRVGA + AI GFL++ GL ++ + +I DPKKGD Y+A + + R Sbjct: 61 AHQPDTHEERKGPRVGAPEAAIQGFLKAAGLSSLDEAKIVSDPKKGDSYVAHIHRHGRPT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ IVP ++ PWPKSMRW + + W+RPL+SILC E + +++ ++ Sbjct: 121 PDVVAEIVPEIVRGFPWPKSMRWGKASAETGSLRWVRPLQSILCTFGPETEEPEVVRFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G+ T GHRF + I+V+ LD ++ LE A V+ D + R++ ILNDA LA A G Sbjct: 181 DGLESGDTTRGHRFLSEGAIRVRRLDDWMAKLEAAFVVADRDRRKDIILNDAKDLALAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LL+EI GLVEW V MG+F++ +L +P+E+IR TI+ NQKCFV + G L Sbjct: 241 LELVEDEGLLDEIAGLVEWPVVLMGAFEEGFLDVPDEVIRATIRINQKCFVLKDPATGRL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FILVSN++ASDGG AIV GN RV+ ARL DA FW+ D+ Sbjct: 301 ANRFILVSNLKASDGGKAIVAGNERVIRARLSDAKFFWETDKKTNA-------------- 346 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + PL++R+A+ +V FH K+G+Q ER+ RI L K +A L+ AD L +RA + +K Sbjct: 347 --AVPLEERLAK--FGNVTFHEKLGSQLERIQRIAALAKALAPLVGADPELAERAALYAK 402 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 +DL TE+V EFPE+QG +GK YA L+ A EEH KP+GP + VPT +S+ V+L Sbjct: 403 SDLRTEVVGEFPEVQGLMGKYYARLEGLPEEIALAAEEHYKPQGPTDRVPTAPVSVAVAL 462 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG++R++LEN + + L++F+E +L+ FF Sbjct: 463 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVVRLVLENGLRLKLTEFVE-PDLLAFFA 521 Query: 540 DRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DRLK++L ++ RHDL++A+ P+ D+LL IV ++ L F SS G L KR Sbjct: 522 DRLKVHLREQGARHDLVDAVFALPDQDDLLLIVKRVEALGRFLSSEDGRNLLAGTKRAAN 581 Query: 599 ILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL IEEKK+ + E+ L I+D I+ ++ + + L+ + Sbjct: 582 ILRIEEKKDGIAYEGGVDTALFAEPEERALADAIADLRPQIEAALASEDFEGAMALIARL 641 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FFD+V VN +D+ +R NRL LL I+ + + +I Sbjct: 642 RAPVDAFFDKVTVNAEDKALRANRLRLLADIRTATRAIADFDRI 685 >gi|90420145|ref|ZP_01228053.1| glycyl-tRNA synthetase, beta chain [Aurantimonas manganoxydans SI85-9A1] gi|90335479|gb|EAS49229.1| glycyl-tRNA synthetase, beta chain [Aurantimonas manganoxydans SI85-9A1] Length = 724 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 339/722 (46%), Positives = 459/722 (63%), Gaps = 21/722 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++G+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLRKLVTDALVEAGLTYEGCREYWTPRRLTLDVRGVD 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + ++ER GPR A +KAI GFLR GL +I + I+ DPKKGD Y+A +RKP R Sbjct: 61 ARSRDVVDERKGPRTDAPEKAIQGFLRGAGLASIDEATIQSDPKKGDFYVATIRKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P ++ PWPKSMRW + W+RPL+SILC E + ++D ++ Sbjct: 121 EEIIAEVMPGIVRGFPWPKSMRWGPASREPGSLRWVRPLQSILCTFGPETEEPVVVDFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN+T GHRFHA +V+ D Y+ LE+A V+LD E R++ I +DA LA A G Sbjct: 181 DGIRAGNVTRGHRFHAAEEFRVRRFDDYVAGLEKAFVVLDAERRKDMIRHDAENLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EGV 298 LE+V D+ LLEE+ GLVEW MG F++ +L +P E+I+LTIK NQKCFVTR + +G Sbjct: 241 LEVVPDEALLEEVSGLVEWPVTLMGEFEETFLQIPPEVIQLTIKVNQKCFVTRRQGGDGT 300 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N F+LVSNI ASDGGA I +GN +VV ARL DAL+FW+ DQ +LP +L +A KF Sbjct: 301 LSNQFVLVSNIAASDGGAEIARGNGKVVRARLSDALYFWQTDQADLPGRDALAPAAEKFR 360 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD----------- 407 LDL+KPLDQRMA+LD L V FHA++GTQGERV RI L ++IA + D Sbjct: 361 LDLAKPLDQRMAKLDALGVTFHARLGTQGERVGRIAALAREIAATVYPDGATLGGASVSA 420 Query: 408 ---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 LV RA VL+KADL TE V EFPELQG +G+ YA LQ E+ S A+EEH KP GP Sbjct: 421 DELKPLVTRAAVLAKADLTTEAVGEFPELQGLMGRYYAALQGEHPSVQAALEEHYKPLGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 ++VPT+ ++I V+LADKLD L+ FWAI+EKP+GSKDPYALRRA LG+IR++L+N++ + Sbjct: 481 TDSVPTDPVAICVALADKLDMLVGFWAIDEKPTGSKDPYALRRAALGVIRLVLDNELVMA 540 Query: 525 LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAIL-----RPENDNLLTIVDLIKHLNE 579 L F+ +L+ FFHDRLK+ L + RHDL++A+L D+LL + + L Sbjct: 541 LGGFMPASDLLAFFHDRLKVQLRESGARHDLVDAVLSGGSGGDRGDDLLDVTRRVTALGA 600 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + G+ L +R ILA EEKK ++ +S L EK L I + Sbjct: 601 FLDTEDGQNLLAGTRRAANILAAEEKKGTRVADAVSLDLLSEHEEKVLAGAIDRAEIELD 660 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + Y L + P++ FF+ VLVN +D VR NRL+LL I+ V + Sbjct: 661 AALAVENYAHAMTALAELRIPVDAFFETVLVNAEDEAVRANRLALLDRIRAATRRVADFS 720 Query: 700 KI 701 +I Sbjct: 721 RI 722 >gi|227821046|ref|YP_002825016.1| glycyl-tRNA synthetase subunit beta [Sinorhizobium fredii NGR234] gi|254781859|sp|C3MHD5|SYGB_RHISN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|227340045|gb|ACP24263.1| glycyl-tRNA synthetase beta chain [Sinorhizobium fredii NGR234] Length = 721 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 365/719 (50%), Positives = 482/719 (67%), Gaps = 18/719 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLIELRSEEIPARMQRKAAGDLKKLVTDALVEAGLTYEGAREYWTPRRLTLDIRGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR+ GL +I D + DPKKGD Y+A + KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRAAGLSSIGDAHVHSDPKKGDFYVAHIVKPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ ++P I+ PWPKSMR + + W+RPL+SI+C AE + ++I + Sbjct: 121 EDIVAEVMPAIIRDFPWPKSMRSGAASAKPGSLRWVRPLQSIVCTFGAETEETRVIPFAV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ Y LE+A V+LD E R+ I DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEAIMVRRFADYADKLEKAKVVLDAERRKEIIGADARNIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV-L 299 LELVED+ LLEE+ GLVEW +V MGSF++ YL +P E+IRLTIKTNQKCFVTR L Sbjct: 241 LELVEDEGLLEEVTGLVEWPRVLMGSFEESYLEIPSEIIRLTIKTNQKCFVTRQPGAETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNI+A DGG IV GN +VV ARL DA HFWKRDQ +LP+L +LK SA KF L Sbjct: 301 SNRFILVSNIEAKDGGKEIVHGNGKVVRARLSDAAHFWKRDQGDLPDLETLKPSAEKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR + +A++ AD ALV+R++VL+K Sbjct: 361 DLGKPLDQRMAKLDALNVTFHAKLGTQGERVARIRSIALALAEVTGADQALVERSVVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G +YAVLQ E+ + +AIE+H KP+GP + VPT+ +S V+L Sbjct: 421 ADLRTEAVGEFPELQGIMGHKYAVLQGEDAAVANAIEDHYKPQGPSDRVPTDAVSAAVAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLDTL FWAI+EKP+GSKDPYALRRA LG+IR+ILE + +PL F + Sbjct: 481 ADKLDTLAGFWAIDEKPTGSKDPYALRRAALGVIRLILEGRTRLPLLPFFDVALKALRTQ 540 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 +L+ FFHDRLK+YL D R+DLI+A+L E D+LL I ++ L F + Sbjct: 541 RPDLTGDIAADLLAFFHDRLKVYLRDLGARYDLIDAVLTSEADDLLMIARRVEALTAFIT 600 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + +G+ L KR QILA EEKK E++ ++ + L+AE+ L+A I +E++ Sbjct: 601 AEEGKNLLAGTKRATQILAAEEKKGTEVADQVDERLFRLDAERTLHASIKLASDDAREAI 660 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L + EP+++FF+ VLVN +DR +R NRL+LL I++ V + KI Sbjct: 661 GKEDFRSAMAALSKLREPVDVFFNDVLVNDEDRAIRANRLALLGLIRSATGEVADFSKI 719 >gi|299134688|ref|ZP_07027880.1| glycyl-tRNA synthetase, beta subunit [Afipia sp. 1NLS2] gi|298590498|gb|EFI50701.1| glycyl-tRNA synthetase, beta subunit [Afipia sp. 1NLS2] Length = 691 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 314/711 (44%), Positives = 435/711 (61%), Gaps = 32/711 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L E++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + GL Sbjct: 1 MPDLLFELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EER GP+VGA A+ GFL++TGL+++ + +I+KDPKKGD Y+A++ KP R Sbjct: 61 GRQPDLKEERKGPKVGAPDAAVQGFLKATGLKSLDEAKIQKDPKKGDFYIALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ I+PV ++ PWPK MRW + A +W+RPL SI+ E ++ D+ Sbjct: 121 IDVIAEILPVIVRTFPWPKQMRWGAGSATRGALTWVRPLHSIIATFGLETEDPDVVKFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP V+ + Y+ LE A V+LDP+ RR+ IL DA +LA A G Sbjct: 181 GGIEAGQVTRGHRFMAPAEFSVRRFEDYVAKLEAAKVVLDPQRRRDIILADAKQLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 ELVED+ LLEE+ GLVEW MGSFD+ +L +P E+IR TI+ NQKCFV R + G L Sbjct: 241 YELVEDEALLEEVAGLVEWPVALMGSFDQDFLSIPGEVIRATIRNNQKCFVVRDPKTGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FILVSNI+A+DGG AIV GN RV+ ARL DA F++ D Sbjct: 301 APKFILVSNIEATDGGKAIVAGNERVIRARLSDAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + + ++VFH K+GTQ ER++RI L +IA L+ ADV RA L+K Sbjct: 342 -LKTKLEARLPKFE--NIVFHEKLGTQAERIARIERLAAEIAPLVGADVEKTKRAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPE+QG +GK YA+ Q E+ S AIE+H KP+GP + VP + ++I V+L Sbjct: 399 ADLLTEVVGEFPEVQGLMGKYYALAQGEDASVAAAIEDHYKPQGPNDRVPNDPVAIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------EDQ 532 ADK+D L FWAI+EKP+GSKDP+ALRRA LG IR+I +N I +PL + + Sbjct: 459 ADKIDILTGFWAIDEKPTGSKDPFALRRAALGAIRLIADNGIRLPLLATFAKAAKPHDGK 518 Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FF DRLK+ L ++ RHDL++A+ D+LL +V ++ L +F + G+ L Sbjct: 519 DLLSFFADRLKVQLREQGARHDLVDAVFALGGQDDLLMVVRRVEALGKFLDTDDGKNLLA 578 Query: 592 SAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR ILAIEEKK++ + L+ EK L A I ++ + + Sbjct: 579 GTKRASNILAIEEKKDKRNFTGAPEASLYKLDEEKNLAAAIEQVKAEAGTAVAKEDFAGA 638 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + ++ FFD+V VN DD+ VR+NRL LL I+ V + KI Sbjct: 639 MGALAKLRPVVDAFFDKVKVNDDDKAVRENRLKLLNEIREATRAVADFSKI 689 >gi|148253849|ref|YP_001238434.1| glycyl-tRNA synthetase subunit beta [Bradyrhizobium sp. BTAi1] gi|229470695|sp|A5EED4|SYGB_BRASB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|146406022|gb|ABQ34528.1| glycyl-tRNA synthetase beta chain [Bradyrhizobium sp. BTAi1] Length = 701 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 311/721 (43%), Positives = 431/721 (59%), Gaps = 42/721 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAAEDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVG AI GFL++TGL ++ + I++DPKKGD Y+A++ KP R Sbjct: 61 ARQADLKEERKGPRVGGPDAAIQGFLKATGLSSLEEATIQRDPKKGDFYVALIEKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL ++PV ++ PWPKSMRW A +W+RPL +I E + ++ + Sbjct: 121 LDVLAEMLPVIVRTFPWPKSMRWGKRSEKPGALNWVRPLHAITATFGLETEEPDVVSFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP I V+ + Y L +A V+LDP+ R++ I+ DA +LA A G Sbjct: 181 DGIEAGQTTYGHRFMAPAAISVRRFEDYEAKLLDAKVVLDPQRRKDTIVTDAKQLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 ELVED LL+E+ GLVEW V MGSFD +YL +P E+IR TI+ NQKCFV R + G L Sbjct: 241 YELVEDPVLLDEVSGLVEWPVVLMGSFDPEYLKVPAEVIRATIRNNQKCFVVRDPKTGGL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FIL +NI+A+DGG I+ GN RV+ ARL DA F++ D Sbjct: 301 APKFILTANIEATDGGKTIIAGNERVIRARLSDAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + + +VFH K+GTQ R++RI L +IA L+ AD A RA L+K Sbjct: 342 -LKTRLEDRLPKFEQ--IVFHEKLGTQAARIARIEKLAAEIAPLVGADAAKTARAAKLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPE+QG +GK YA+ Q E++S A EEH KP+GP + VPT+ +S+ V+L Sbjct: 399 ADLLTEVVGEFPEVQGLMGKYYALAQGEDVSVAAACEEHYKPQGPGDRVPTDPVSVAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----------- 528 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR+I EN + + L Q Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLITENSLRLSLLQVAGSALAGLHVK 518 Query: 529 ------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFF 581 +L+ FF DRLK+ L ++ RHDL++A+ D+LL +V ++ L +F Sbjct: 519 SELDAGKLSADLLSFFADRLKVQLREQGARHDLVDAVFALGGQDDLLMVVRRVEALGKFL 578 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + G+ L KR ILAIEEKK++ + L+ EK L I + G+ Sbjct: 579 ETDDGKNLLAGTKRASNILAIEEKKDKRKFDGAPDAALYRLDEEKALAKAIGEVGSEAGT 638 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + + + + ++ FFD+V VN DD +R+NRL LL I+N V + K Sbjct: 639 AVAKEDFAAAMHAMAKLRPAVDAFFDKVKVNDDDAAIRENRLKLLNEIRNATRAVADFSK 698 Query: 701 I 701 I Sbjct: 699 I 699 >gi|90425820|ref|YP_534190.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris BisB18] gi|90107834|gb|ABD89871.1| Glycine--tRNA ligase [Rhodopseudomonas palustris BisB18] Length = 728 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 314/748 (41%), Positives = 420/748 (56%), Gaps = 69/748 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L EG++Y + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAAEDLRRMVTDKLVAEGLVYDGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVG AI GFL++TGL ++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 ARQSDLKEERKGPRVGGPDAAIQGFLKATGLASLDEAKIQRDPKKGDFYIALIEKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV ++ PWPKSMRW + A W+RPL SI+ + ++ D+ Sbjct: 121 LDVLADILPVIVRTFPWPKSMRWGERSAKPGALQWVRPLHSIVATFGIDTEDPDVVAFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP I V+ + Y L +A V+LDP+ R++ IL+DA LA A Sbjct: 181 SGIKAGQVTRGHRFMAPGEISVRRFEDYDAKLFDAKVVLDPQRRKDIILHDARTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 ELVED LL+E+ GLVEW MGSFD +L +P E+IR TI+ NQKCFV G L Sbjct: 241 FELVEDPVLLDEVSGLVEWPVALMGSFDPAFLAIPGEVIRATIRNNQKCFVVSDPATGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 N FIL +NI+ASDGG AIV GN RV+ ARL DA F++ D Sbjct: 301 TNKFILTANIEASDGGKAIVAGNERVIRARLSDAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 342 -LKTKLEDRLPK--FAQIVFHEKLGTQAERIARIERLAAEIAPLVGADVEKARRAAQLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VP++ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPNDRVPSDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------- 532 ADK+DTL+ FWAI+EKP+GSKDPYALRRA LG+IR+ILEN I L E Sbjct: 459 ADKIDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLILENNIRPNLISAFEGHSSAVDQT 518 Query: 533 -------------------------------------NLILFFHDRLKLYLHDRDIRHDL 555 +L+ FF DRLK+ L ++ RHDL Sbjct: 519 TMRIAQTKAKSSGGFSLVLNAHSTQSWNDRQTRTTSVDLLSFFADRLKVQLREQGARHDL 578 Query: 556 IEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLE 613 ++A+ D++L IV ++ L F ++ G+ L KR IL IEEKK+ R Sbjct: 579 VDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLLAGVKRAANILRIEEKKDARAFDGA 638 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 + + EK L I ++ + + + + ++ FFD+V VN D Sbjct: 639 PDASLYVADEEKTLATAIDQVKLEASSAVAREDFAAAMSAMAKLRPAVDAFFDKVKVNDD 698 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKI 701 D VRDNRL LL I+ V + KI Sbjct: 699 DARVRDNRLKLLNEIRAATRAVADFSKI 726 >gi|254781094|ref|YP_003065507.1| glycyl-tRNA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254040771|gb|ACT57567.1| glycyl-tRNA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] Length = 702 Score = 683 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 702/702 (100%), Positives = 702/702 (100%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS Sbjct: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI Sbjct: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL Sbjct: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG Sbjct: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA Sbjct: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD Sbjct: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA Sbjct: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA Sbjct: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD Sbjct: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 Query: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL Sbjct: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP Sbjct: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 Query: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV Sbjct: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 >gi|220924241|ref|YP_002499543.1| glycyl-tRNA synthetase subunit beta [Methylobacterium nodulans ORS 2060] gi|254781857|sp|B8IBI6|SYGB_METNO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219948848|gb|ACL59240.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium nodulans ORS 2060] Length = 701 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 321/721 (44%), Positives = 427/721 (59%), Gaps = 42/721 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRRAAEDLRKLVTDALVERGFLYEGAKAFATPRRLALHIAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVGA + AI GFL+S GL +++D + DPKKG+ Y+AV+ +P R Sbjct: 61 TRGKDVREERKGPRVGAPEAAIQGFLKSAGLTSLADATVVADPKKGEFYVAVIERPGRDT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL SI+ E + + + Sbjct: 121 IDVLAEILPAVIRNFPWPKSMRWGAASTEPGSLRWVRPLHSIVASFGPETETPERVPFAI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP PI+V+ Y+ LE A V+LD + RR+ IL+DA LA A G Sbjct: 181 DGIEAGFTTYGHRFLAPGPIEVRRFADYLPALERARVVLDADRRRDIILHDARDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE---- 296 L+LVED+ LLEE+ GLVEW MGSFD+ +L +P E+IR TI+ NQKCFV R Sbjct: 241 LDLVEDEGLLEEVAGLVEWPVTLMGSFDESFLDIPPEVIRATIRANQKCFVLRAPSQDGR 300 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 LAN FILVSN+ ASDGGAAIV GN RVV ARL DA FW+ D+ Sbjct: 301 ERLANAFILVSNLAASDGGAAIVAGNERVVRARLSDAKFFWETDK--------------- 345 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 PL+ R+ +L D+VFH K+GTQG RV RI L + +A L+ AD L RA Sbjct: 346 -----KVPLESRLPKLK--DIVFHEKLGTQGARVERIAALARNLAPLVGADAGLAGRAAR 398 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL TE+V EFPELQG +G+ YA LQ E + AIEEH KP GP + VPT +S+ Sbjct: 399 LAKADLVTEMVGEFPELQGLMGRYYAELQGEPAAIATAIEEHYKPLGPSDRVPTEPVSVA 458 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 V+LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG+IR++L + +PL Sbjct: 459 VALADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVIRLVLAGDVRLPLLGAFAQAVAGH 518 Query: 532 ---------QNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFF 581 +L+ FF DRLK++L D+ RHDLI+A+ P D+LL IV ++ L F Sbjct: 519 AAVGPESFAADLLGFFADRLKVHLRDQGARHDLIDAVFAIPGQDDLLMIVRRVEALGRFL 578 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + G L +R IL IEEK++ R P L E L + E Sbjct: 579 DTEDGRNLLAGFRRAANILRIEEKRDGRAYDAAPDPALFSLPEESALANALDAARARAAE 638 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + + L ++ P++ FFD+V VN +D +R NRL+LL ++ V + + Sbjct: 639 AVAAEDFEGAMRALATLRPPVDAFFDKVTVNAEDAALRANRLALLNALREATRAVADFAR 698 Query: 701 I 701 I Sbjct: 699 I 699 >gi|27377647|ref|NP_769176.1| glycyl-tRNA synthetase subunit beta [Bradyrhizobium japonicum USDA 110] gi|81841876|sp|Q89S69|SYGB_BRAJA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|27350792|dbj|BAC47801.1| glycyl-tRNA synthetase beta chain [Bradyrhizobium japonicum USDA 110] Length = 699 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 311/720 (43%), Positives = 435/720 (60%), Gaps = 42/720 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ ER GP++GA A+ GFL++TGL+++ + +I++DP KGD Y+A++ KP R Sbjct: 61 ARQPDLKTERRGPKMGAPDAAVQGFLKATGLKSLDEAKIQRDP-KGDFYIALIEKPGRDA 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV I+ PWPKSMRW + +W+RPL +I E + ++ + Sbjct: 120 IDVLAEILPVIIRTFPWPKSMRWGARSGKPGSLNWVRPLHAITATFGLETEEPDVVKFAV 179 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP I V+ + Y L +A V+LDPE R++AIL DA +LA A G Sbjct: 180 DGIEAGQTTYGHRFLAPAAINVRRFEDYEAKLLDAKVVLDPERRKDAILTDAKQLAFAQG 239 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 +LVED++LL+E+ GLVEW V MGSF++++L P E+IR TI+ NQKCFV + G L Sbjct: 240 FDLVEDQNLLDEVAGLVEWPVVLMGSFEEEFLATPAEVIRATIRNNQKCFVVSDAKTGKL 299 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FILV+NI+A+DGG I+ GN RV+ ARL DA F++ D Sbjct: 300 ANKFILVANIEATDGGKTIIAGNERVIRARLSDAKFFYETD------------------- 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + + +VFH ++GTQ R++RI L +IA L+ ADVA RA L+K Sbjct: 341 -LKTKLEDRLPKFEQ--IVFHEELGTQAARITRIERLAAEIAPLVGADVAKTARAAHLAK 397 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPE+QG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +S+ V+L Sbjct: 398 ADLLTEVVGEFPEVQGLMGKYYALAQGEDASVAAACEEHYKPQGPADRVPTDPVSVAVAL 457 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR+I EN + + L + Sbjct: 458 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLIAENTLRLSLMKVAASALAGLSVK 517 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFS 582 +L+ FF DRLK+ L ++ RHDL++A+ D+LL IV + L +F Sbjct: 518 PADVQKLPGDLLTFFADRLKVQLREQGARHDLVDAVFALGGQDDLLMIVRRVDALGKFLE 577 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S G+ L KR IL+IEEKK++ L EK L IS+ S Sbjct: 578 SDDGKNLLAGTKRASNILSIEEKKDKRTFDGAPDAALYSLGEEKALAKAISEVQAEASAS 637 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + + P++ FFD+V VN DD +VR+NRL LL I++ V + KI Sbjct: 638 VAKEDFAAAMSAMAKLRPPVDAFFDKVRVNDDDPKVRENRLKLLNEIRSATRAVADFSKI 697 >gi|328544957|ref|YP_004305066.1| glycyl-tRNA synthetase beta subunit [polymorphum gilvum SL003B-26A1] gi|326414699|gb|ADZ71762.1| Glycyl-tRNA synthetase beta subunit [Polymorphum gilvum SL003B-26A1] Length = 695 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 309/720 (42%), Positives = 432/720 (60%), Gaps = 46/720 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL ++ L E G+ Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRRAAEDLKSLVTNALVEAGLTYEGAKAFSTPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA KA++GFLR GL +I + I+ DPKKGD Y+AV+ +P R Sbjct: 61 VASSATREERKGPRVGAPDKALEGFLRGAGLSSIDEATIQTDPKKGDFYVAVIERPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ +P ++ PWPKSMRW W+RPL+SIL E + +I+ ++ Sbjct: 121 IDIIAEAMPGIVRAFPWPKSMRWGAGQ-----LRWVRPLQSILATFGPETEEPEIVRFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF A I+V+ D Y+ LE+ V+LD + R++ IL+DA A A+G Sbjct: 176 DGIVSGDTTRGHRFLADAEIRVRRFDDYMPKLEKHKVVLDADRRKDMILHDARDRALALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 LELVED+ LLEE+ GLVEW V GSF++ +L +P+E IRLTI+ NQKCFV R + G L Sbjct: 236 LELVEDEGLLEEVAGLVEWPVVLTGSFEEAFLAIPDECIRLTIRANQKCFVLRDPKTGRL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+L SNI +DGG +V GN +V+ ARL DA FW+ D Sbjct: 296 ANRFVLTSNIVPADGGKVVVAGNEKVIRARLSDARFFWETD------------------- 336 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L + +LD +VFH K+G+QGERV R+ L ++A L+ AD R L+K Sbjct: 337 -LKTKLADTLPKLD--GIVFHDKLGSQGERVKRLEALAVELAPLVGADTDKARRGAELAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G+ YA Q E+ S AIE+H KP+GP + VPT+ ++I V+L Sbjct: 394 ADLVSAMVYEFPELQGLMGRYYATAQGEDASVATAIEDHYKPQGPSDRVPTDPVAIAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 +DKLD L FWAI+EKP+GSKDPYALRRA LG+IRI+LEN + +PL++ I Sbjct: 454 SDKLDLLAGFWAIDEKPTGSKDPYALRRAALGVIRIVLENGLRLPLARLIGAAQSNLGIG 513 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFS 582 ++L+ FF DRLK++L D RHDLI+A+ D+LL IV ++ L F S Sbjct: 514 LSDPDALVEDLLAFFADRLKVHLKDEGARHDLIDAVFALGGQDDLLMIVRRVEALGTFLS 573 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + G L +R IL IEEKK+ + +L+ AE +L A I + E+ Sbjct: 574 TDDGANLLAGYRRAVNILRIEEKKDGAPVEGRPHADHLVEPAEIQLAAAIDAARAEVGEA 633 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + L + P++ FF+++LVN +D VR NRL LL I+++ V + ++ Sbjct: 634 LAGEDFEAAMTALAHLRAPVDRFFEEILVNAEDAGVRANRLRLLAEIRDVAGTVADFSRV 693 >gi|49473963|ref|YP_032005.1| glycyl-tRNA synthetase subunit beta [Bartonella quintana str. Toulouse] gi|49239466|emb|CAF25817.1| Glycyl-tRNA synthetase beta chain [Bartonella quintana str. Toulouse] Length = 740 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 339/739 (45%), Positives = 460/739 (62%), Gaps = 37/739 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA DL +I L G+ Y+ R+YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAADLKKCVIDQLVNAGLTYKAAREYWTPRRLTLDVRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + IDGFLR+TGL IS+ I DPKKGD Y+A + K R Sbjct: 61 IRSKDIHEERRGPSTKSPQHVIDGFLRTTGLNNISEAPIVHDPKKGDFYIAKIIKKGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PWPKSMRW + A WIRPL++ILC+ E + ++I + Sbjct: 121 EEIIADILPGIIRNFPWPKSMRWGKDSAKSGALKWIRPLQNILCVFGPEIGETRVIPFTI 180 Query: 181 KEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + P++++ D YI LE V+LD E R+N IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSNGKPLQIRRFDDYITQLEAHKVILDAERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG+FDK +L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDSALLEEVAGLVEWPVVLMGNFDKSFLDIPPEIIRLTIQANQKCFVTRKQGEKI 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ FILVSNI ASD G I +GNS+VV ARL DAL+FW+ DQ++LP++ L+ SA K Sbjct: 301 KLSHNFILVSNILASDEGKEISKGNSKVVCARLSDALYFWQTDQHDLPDIKYLQSSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 LDL KPLDQRMARLD L+V FH K+GTQG RV RI L +KIA + AD L RA +L Sbjct: 361 ALDLKKPLDQRMARLDHLNVTFHEKLGTQGARVERIATLAQKIAPSVQADPLLAKRAAIL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TE+V EFPELQG +G++YA+LQ E+ +AIE+H KP+GP + +P ++I V Sbjct: 421 AKADLQTEVVGEFPELQGFMGRKYALLQEEDPRVAEAIEDHYKPQGPKDRIPQEPLAIAV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 +LADK+D L+ FW INEKP+GSKDPYALRRA LGIIR++L I L Sbjct: 481 ALADKIDMLVGFWLINEKPTGSKDPYALRRAALGIIRLVLLRDWKINLMPLFHLATNLFL 540 Query: 531 ---------------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +L+ FFH+RLK+YL + +R+D +EA+L + Sbjct: 541 QQKNKDETSRTKTTQSQNLVLEKTEYILSDLLFFFHERLKIYLKEEGVRYDALEAVLNKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D+ L + ++ L F +++ G FL + KRI IL E +K I EI+P+ Sbjct: 601 ADDFLLVARRVEALIAFINTSDGGSFLAAVKRIVNILENEIQKGSTIVNEINPELFSETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY VI + +++ ++ + + L + + I+ FF++VLVN + +R NRL+ Sbjct: 661 EKQLYQVIIEAEKKVRDHINAINLSRALNTLAPLRKFIDAFFEKVLVNDKNPNIRTNRLA 720 Query: 684 LLQYIKNIILIVINVQKIV 702 LL+ I N V + K+V Sbjct: 721 LLKRIHNTTQAVADFSKLV 739 >gi|254504740|ref|ZP_05116891.1| glycyl-tRNA synthetase, beta subunit [Labrenzia alexandrii DFL-11] gi|222440811|gb|EEE47490.1| glycyl-tRNA synthetase, beta subunit [Labrenzia alexandrii DFL-11] Length = 695 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 304/720 (42%), Positives = 421/720 (58%), Gaps = 46/720 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L + G+ Y+ + + TP RL L++ G+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAEDLKTLVTNALVDAGLPYEGAKAFATPRRLALHVAGVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA +KA++GFLR GL +I D I+ DPKKGD Y+AV+ KP R Sbjct: 61 AGSAATREERKGPRVGAPEKAVEGFLRGAGLASIDDATIQTDPKKGDFYVAVIEKPGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ +P ++ PWPKSM+W ++ W+RPL SI+ E + ++ + Sbjct: 121 IDIIAEFMPGILRNFPWPKSMKWG-----TTSTRWVRPLHSIIATFGPETEEPDVVPFEF 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF A V+ D Y LE+ V+LD + R++ IL DA A A+G Sbjct: 176 DGIKSGKTTRGHRFLADVAFDVRRFDDYAPALEKHKVVLDADRRKDIILADAKDRALALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 LELVED LLEE+ GLVEW V GSFD+ +L +P+E I+LTIK NQKCFV + + G L Sbjct: 236 LELVEDPGLLEEVAGLVEWPVVLTGSFDEAFLEIPDECIQLTIKVNQKCFVLKDPKTGKL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+L+SNI A D G I+ GN +V+ ARL DA FW D Sbjct: 296 ANKFVLISNIVAPDDGKLIIAGNEKVIRARLSDAQFFWTSD------------------- 336 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L + +L+ DV FH K+G+ GERV R+ L ++A L+ AD A R L+K Sbjct: 337 -LKTNLTDNLPKLN--DVKFHEKLGSVGERVQRLIALSAELAPLVGADEAKAKRGAELAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G+ YA Q E+ S AIEEH KP+GP ++VP + ++I V+L Sbjct: 394 ADLVSAMVFEFPELQGLMGRYYATAQGEDASVATAIEEHYKPQGPSDSVPADPVAIAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 A+KLD L FWAI+EKP+GSKDPYALRRA LG+IRI+LEN + + L + I Sbjct: 454 AEKLDLLTGFWAIDEKPTGSKDPYALRRAALGVIRIVLENNLRLKLGELILSALKAQSAI 513 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFS 582 +L+ FF DRLK++L D +RHDLI+A+ D+LL +V ++ L +F S Sbjct: 514 ADDEAALVADLLSFFADRLKVHLKDEGMRHDLIDAVFALDGQDDLLMVVKRVEALQKFVS 573 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S G KR IL EEKK+ ++ + +L +AE L I E+ Sbjct: 574 SDDGTNLAAGYKRAVNILKAEEKKDGTPVTGKPHADHLSEQAEIDLAVAIDTARAEAAEA 633 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + L + P++ FF+ +LVN DD +R NRL LL I++ +V + K+ Sbjct: 634 VKSENFEGAMEALSKLRAPVDRFFEDILVNADDPALRMNRLQLLAEIRDATHVVADFSKV 693 >gi|254465195|ref|ZP_05078606.1| glycyl-tRNA synthetase, beta subunit [Rhodobacterales bacterium Y4I] gi|206686103|gb|EDZ46585.1| glycyl-tRNA synthetase, beta subunit [Rhodobacterales bacterium Y4I] Length = 699 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 286/722 (39%), Positives = 412/722 (57%), Gaps = 46/722 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y TP RL L + GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRVTDGLVEAGLTYAGAAALSTPRRLTLAVDGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR GL D +++ KG VY A++ KP R Sbjct: 61 AESPTVREERKGPKVGAPDKAIEGFLRGAGLT--RDQLEERETPKGAVYFALIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW A W+RPL SILCIL E+ ++DLD+ Sbjct: 119 AEIIAEVLEDTIRNFPWPKSMRWGAG-----ALRWVRPLHSILCILSDEN-GTSVVDLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP I V D Y L+ A V+LD R AI +A A A G Sbjct: 173 DGIKSGNTTRGHRFMAPEKITVTGFDDYAAKLKRAFVVLDARERAEAIWQEATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L++VEDK LL E+ GLVEW V MGS D ++L LP E+++ ++K +QK F + + Sbjct: 233 LDVVEDKGLLAEVAGLVEWPVVLMGSIDAEFLELPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D + + + Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFWENDLRTAKSEAGMGV-------- 344 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + L +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 345 -------WVENLS--NVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA + +A E+H P GP ++VP+ +S+ V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAEAAGLPQAVANACEQHYSPLGPGDDVPSEPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-------------- 526 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++LEN + +PL+ Sbjct: 456 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLENDVRMPLNMVFGKAAEITGKRE 515 Query: 527 -----QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEF 580 F + +L FFHDRLK++L D+ IRHD+I+A + +D+L +V + L +F Sbjct: 516 GASGEAFADVNDLRGFFHDRLKVFLRDQGIRHDVIDACIAMDGSDDLTLLVKRARALEDF 575 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + GE L KR IL+ E+K+ E S ++ E EK L+ + G I Sbjct: 576 LKTEDGENLLQGFKRANNILSQAEEKDGVEYSYGADRKFAEDETEKALFDALEAGGAAIS 635 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +++ + + + ++ P++ FF+ V VN ++ +R NRL+LL I+ + V ++ Sbjct: 636 PAIEAEDFAAAMRGMAALRAPVDAFFEAVQVNAENEVLRRNRLNLLSQIRQVCGQVADLT 695 Query: 700 KI 701 K+ Sbjct: 696 KV 697 >gi|75676770|ref|YP_319191.1| glycyl-tRNA synthetase subunit beta [Nitrobacter winogradskyi Nb-255] gi|74421640|gb|ABA05839.1| glycyl-tRNA synthetase beta chain [Nitrobacter winogradskyi Nb-255] Length = 727 Score = 674 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 304/747 (40%), Positives = 433/747 (57%), Gaps = 68/747 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFVTPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++ GL ++ + +I++DPKKGD Y+A++ +P R Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKAAGLTSLDEAKIQRDPKKGDFYVALIERPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL ++PV ++ PWPK MRW + A +W+RPL SI+ E + +++ D+ Sbjct: 121 IDVLAELLPVIVRTFPWPKQMRWGERSAKPGALTWVRPLHSIIATFGMETEEPEVVPFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 +I G T GHRF AP V+ + Y L +A V+LDP+ R++ IL DA LA A G Sbjct: 181 ADITAGQATRGHRFMAPGEFSVRRFEDYEAKLHDAKVVLDPQRRKDIILADAKELAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 ELVED+ LL+E+ GLVEW V MGSFDK++L +P E+IR TI+ NQKCFV + G L Sbjct: 241 YELVEDQALLDEVSGLVEWPVVLMGSFDKEFLSIPGEVIRATIRNNQKCFVVNDPKSGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+LV+N++ASDGG AI+ GN RV+ ARL DA F++ D Sbjct: 301 ANRFLLVANLEASDGGEAIIAGNERVIRARLADAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + + +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 342 -LKTKLEARLPKFEQ--IVFHEKLGTQAERIARIERLAAEIAPLVGADVEKAKRAARLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VP++ +SI V+L Sbjct: 399 TDLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPNDRVPSDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADK+DTL+ FWAI+EKP+GSKDPYALRRA LG+IR+++ N + + L + Sbjct: 459 ADKIDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLVVNNGLQLKLRHITAEALNLLEEQ 518 Query: 532 -----------------------------------QNLILFFHDRLKLYLHDRDIRHDLI 556 ++L++FF DRLK+ L ++ RHDL+ Sbjct: 519 KPDLVGEARQRWLNQYGGSHSIEAALESAVAAVFVKDLLIFFADRLKVQLREQGARHDLV 578 Query: 557 EAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEI 614 +A+ D+LL IV ++ L +F + G+ L KR ILAIEEKK++ Sbjct: 579 DAVFALEGQDDLLMIVRRVEALGKFLDTDDGKNLLSGTKRASNILAIEEKKDKRSFDGAP 638 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 L EK L A I ++ + + + + ++ FF+QV VN D Sbjct: 639 DASLYTLGEEKALGAAIDQVKREASAAVATEDFAAAMSAMAKLRPAVDAFFEQVKVNDAD 698 Query: 675 REVRDNRLSLLQYIKNIILIVINVQKI 701 ++R+NRL LL I+ V + KI Sbjct: 699 PKIRENRLRLLNEIRAATRTVADFSKI 725 >gi|115526402|ref|YP_783313.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris BisA53] gi|115520349|gb|ABJ08333.1| Glycine--tRNA ligase [Rhodopseudomonas palustris BisA53] Length = 744 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 317/764 (41%), Positives = 426/764 (55%), Gaps = 85/764 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L EG++Y+ + + TP RL L + GL Sbjct: 1 MPDLLLELFSEEIPARMQAKAAEDLKRLVTDRLVAEGLVYEGAKAFATPRRLALTIHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++S+ +I+ DPKKGD Y+A++ KP R Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLSEAKIQSDPKKGDFYIALIEKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV ++ PWPKSMRW + A W+RPL SI+ E ++ D+ Sbjct: 121 LDVLAEILPVIVRTFPWPKSMRWGERSAKPGALQWVRPLHSIIATFGLETEDPDVVAFDI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP V+ Y L +A V+LDP+ R++ IL DA LA A Sbjct: 181 SGIKAGQVTRGHRFMAPQDFSVRRFADYEAKLYDAKVVLDPQRRKDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 ELVED LL+E+ GLVEW MGSFDK++L +P E+IR TI+ NQKCFV R G L Sbjct: 241 YELVEDPVLLDEVSGLVEWPVALMGSFDKEFLSIPGEVIRATIRNNQKCFVVRDPATGNL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FIL +NI+ASDGGAAI GN RV+ ARL DA F++ D Sbjct: 301 APKFILTANIEASDGGAAITAGNERVIRARLSDAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + D +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 342 -LKTSLESRLPKFDQ--IVFHEKLGTQAERIARIERLAAEIAPLVGADVEKTKRAARLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VP++ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPTDRVPSDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID----------------- 522 ADK+DTL+ FWAI+EKP+GSKDPYALRRA LG+IR+ILEN I Sbjct: 459 ADKIDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLILENGIRTTLSKCMMFGHKQVSTK 518 Query: 523 ----------------------------IPLSQFIEDQNLILFFH--------------- 539 + + D ++ LF H Sbjct: 519 LFRFSSANFRAHIATILGVLSPDATERVLAAREIDFDTSVALFHHEKGSADTEQLLSFVV 578 Query: 540 DRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DRLK+ L D+ RHDL++A+ D+LL +V ++ L F ++ G+ L KR Sbjct: 579 DRLKVQLRDQGARHDLVDAVFALGGQDDLLMVVRRVEALAAFLATDDGKNLLAGVKRAAN 638 Query: 599 ILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL IEEKK+ R + EK L A I ++ + + + + Sbjct: 639 ILRIEEKKDSRAFDGAPDAALYASDEEKALAAAIDQAKVEASSAVAKEDFSAAMSAMAKL 698 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ FF++V VN DD+ VR+NRL LL I+ V + KI Sbjct: 699 RPAVDAFFEKVKVNDDDKAVRENRLKLLNEIRAATRAVADFSKI 742 >gi|315122428|ref|YP_004062917.1| glycyl-tRNA synthetase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495830|gb|ADR52429.1| glycyl-tRNA synthetase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 700 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 543/702 (77%), Positives = 609/702 (86%), Gaps = 3/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEIYSEEIPARMQ KA EDL + LLKE G+ Y+++RQYWTP RLF+YLKGL+ Sbjct: 2 MLGFLLEIYSEEIPARMQRKATEDLGKNVTRLLKEYGLSYESIRQYWTPRRLFVYLKGLT 61 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P SPEKIEERLGPRVGA +KAI+GFL STGL+ ISDC+IKKDPKKGD+YLAV++KPKRL Sbjct: 62 PSSPEKIEERLGPRVGASQKAIEGFLHSTGLKKISDCKIKKDPKKGDLYLAVIKKPKRLA 121 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++K IVP+AIQ VPWPKSMRWST +SP+S FSWIRPL+SILC+L +++ K IIDL+L Sbjct: 122 EDIIKEIVPIAIQNVPWPKSMRWSTNNSPVSDFSWIRPLQSILCVLFSKEGKSTIIDLNL 181 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 K IPCGNITYGHRFHAP PIKV+ LD YI LE+A VLLDPE RRN IL DA L+S G Sbjct: 182 KGIPCGNITYGHRFHAPQPIKVKCLDSYISGLEKAKVLLDPEHRRNTILRDARLLSSVNG 241 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 +ELVED LLEEI+GLVEWVQV +GSFD+KYLCLPEELIRLTIKTNQKCFVTRTR+G LA Sbjct: 242 VELVEDDGLLEEIVGLVEWVQVLIGSFDEKYLCLPEELIRLTIKTNQKCFVTRTRQGKLA 301 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILVSNIQASDGG AIVQGNS+VVAARLEDALHFWKRDQ NLP++ SLKESALKFNLD Sbjct: 302 NRFILVSNIQASDGGIAIVQGNSKVVAARLEDALHFWKRDQENLPDIDSLKESALKFNLD 361 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 LSKPLDQRMA+LD L+VVFHAKIGTQGERVSRIR+LGKKIAQLI D+ALVDRA VL KA Sbjct: 362 LSKPLDQRMAKLDALNVVFHAKIGTQGERVSRIRLLGKKIAQLIGVDIALVDRAAVLLKA 421 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DLCT+IVREFPELQGKIGKEYA LQ N + AIEEHLKPRGPLE VPT+KISIT+SLA Sbjct: 422 DLCTDIVREFPELQGKIGKEYANLQ--NETIVLAIEEHLKPRGPLETVPTDKISITLSLA 479 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DKLDTLINFWAINEKPSGS+DPYALRRA LGIIRIILENKI IPLSQF+EDQNLILFFH Sbjct: 480 DKLDTLINFWAINEKPSGSQDPYALRRAALGIIRIILENKIHIPLSQFVEDQNLILFFHV 539 Query: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 RLKLYL + IRHDLIEAIL+PENDNLL IVDLIK+LNEFF+S KG+ FL SAKRI QIL Sbjct: 540 RLKLYLREIGIRHDLIEAILQPENDNLLVIVDLIKYLNEFFNSEKGKNFLFSAKRILQIL 599 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 AIEEKK REI L I+PQ LEAEK+LY VISD HI++SM + YH+IGDLL S+ EP Sbjct: 600 AIEEKKGREI-LPIAPQKFSLEAEKKLYTVISDLDLHIKDSMHNNAYHRIGDLLFSLHEP 658 Query: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 IE FFD V+VNV+D+EVR+NRL+LLQ K II+ V ++QKIV Sbjct: 659 IESFFDNVMVNVEDQEVRNNRLALLQCTKKIIMKVFDIQKIV 700 >gi|306842309|ref|ZP_07474969.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. BO2] gi|306287566|gb|EFM59022.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. BO2] Length = 777 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 346/775 (44%), Positives = 457/775 (58%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EEIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDEAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FW I+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWGIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLATENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEEDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ ++P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADWVNPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDVNVRANRLALLDQIRAATGKVADFSKI 775 >gi|306845032|ref|ZP_07477613.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. BO1] gi|306274664|gb|EFM56453.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. BO1] Length = 777 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 348/775 (44%), Positives = 456/775 (58%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQVHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQSDAS 300 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQREEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAQKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDEAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLATENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEEDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREAGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDVNVRANRLALLDQIRAATGKVADFSKI 775 >gi|259416308|ref|ZP_05740228.1| glycyl-tRNA synthetase, beta subunit [Silicibacter sp. TrichCH4B] gi|259347747|gb|EEW59524.1| glycyl-tRNA synthetase, beta subunit [Silicibacter sp. TrichCH4B] Length = 687 Score = 670 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 285/710 (40%), Positives = 417/710 (58%), Gaps = 34/710 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ +A EDL + L E G+ Y TP RL L ++GL Sbjct: 1 MADLLIELFSEEIPARMQARAGEDLKKRMTDGLVEAGLTYAGAHALTTPRRLTLAIEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA +KAI+GFLR GL D ++D KG VY A++ KP R Sbjct: 61 DHSPTVREERKGPKVGAPEKAIEGFLRGAGLS--RDQLEERDTPKGAVYFAIIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL SILC+L ED +++ LD+ Sbjct: 119 AEIIAEVLEDTIRNFPWPKSMRWGAG-----SLRWVRPLHSILCVLTRED-GSEVVSLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T+GHRF AP I V S + Y L+ A V+LDP+ R AI DA A A G Sbjct: 173 DGITSGDATWGHRFMAPARISVTSFEDYAAKLKRAFVVLDPKEREAAIWQDATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V+DK LL E+ GLVEW V MGS D ++L LP E+++ ++K +QK F + + Sbjct: 233 LEVVDDKGLLAEVAGLVEWPVVLMGSIDAEFLDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D + Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFWENDLRIAKSEVG----------- 341 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 ++ + L +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 342 ----MEGWLESLG--NVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAAKVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA +A ++H P GP + VPT +S+ V++A Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAQAAGLPQEVANACQQHYSPLGPSDEVPTEPVSVAVAMA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-------QFIEDQN 533 DK+DTL FWAI+EKP+GSKDPYALRRA LG+IR++LEN + + LS + ++ + Sbjct: 456 DKIDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLENGVRVALSGVFTQGYEGADESD 515 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ FFHDRLK++L D+ IRHD+I+A + ND+L +V + L F SS GE L Sbjct: 516 LLSFFHDRLKVFLRDQGIRHDVIDACIAMEGNDDLTLLVKRARALEAFMSSEDGENLLQG 575 Query: 593 AKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR IL+ E+K+ E S +++ AE L+ ++ I +++ + + Sbjct: 576 FKRANNILSQAEEKDGVEYSYGADKKFIEDAAEAALFDALAANEGAISSAIEAEDFAAAM 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ P++ FF+ V VN D++ VR NRL+LL I+ + V ++ +I Sbjct: 636 GGMAALRAPVDAFFEAVQVNSDNQVVRRNRLNLLSQIRKVCGQVADLSRI 685 >gi|23501308|ref|NP_697435.1| glycyl-tRNA synthetase subunit beta [Brucella suis 1330] gi|161618379|ref|YP_001592266.1| glycyl-tRNA synthetase subunit beta [Brucella canis ATCC 23365] gi|254703758|ref|ZP_05165586.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] gi|260566988|ref|ZP_05837458.1| glycyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261754404|ref|ZP_05998113.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] gi|23347197|gb|AAN29350.1| glycyl-tRNA synthetase, beta subunit [Brucella suis 1330] gi|161335190|gb|ABX61495.1| glycyl-tRNA synthetase, beta subunit [Brucella canis ATCC 23365] gi|260156506|gb|EEW91586.1| glycyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261744157|gb|EEY32083.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] Length = 777 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 348/775 (44%), Positives = 456/775 (58%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNEFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR +L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRPLLSQEWKFP 540 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 775 >gi|163842686|ref|YP_001627090.1| glycyl-tRNA synthetase subunit beta [Brucella suis ATCC 23445] gi|163673409|gb|ABY37520.1| glycyl-tRNA synthetase, beta subunit [Brucella suis ATCC 23445] Length = 777 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 348/775 (44%), Positives = 457/775 (58%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLATENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 775 >gi|254701212|ref|ZP_05163040.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] gi|261751750|ref|ZP_05995459.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] gi|261741503|gb|EEY29429.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] Length = 777 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 349/775 (45%), Positives = 458/775 (59%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ IL DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIILQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 775 >gi|225851940|ref|YP_002732173.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis ATCC 23457] gi|254693188|ref|ZP_05155016.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|254707863|ref|ZP_05169691.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|254709553|ref|ZP_05171364.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|254716617|ref|ZP_05178428.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|256031047|ref|ZP_05444661.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] gi|256044124|ref|ZP_05447031.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|256060541|ref|ZP_05450709.1| glycyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] gi|261213429|ref|ZP_05927710.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|261218417|ref|ZP_05932698.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|261315353|ref|ZP_05954550.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|261317081|ref|ZP_05956278.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|261324535|ref|ZP_05963732.1| glycyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] gi|265988118|ref|ZP_06100675.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] gi|225640305|gb|ACO00219.1| glycyl-tRNA synthetase, beta subunit [Brucella melitensis ATCC 23457] gi|260915036|gb|EEX81897.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|260923506|gb|EEX90074.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|261296304|gb|EEX99800.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|261300515|gb|EEY04012.1| glycyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] gi|261304379|gb|EEY07876.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|264660315|gb|EEZ30576.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] Length = 777 Score = 669 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 348/775 (44%), Positives = 457/775 (58%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 775 >gi|17987812|ref|NP_540446.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. 16M] gi|17983538|gb|AAL52710.1| glycyl-tRNA synthetase beta chain [Brucella melitensis bv. 1 str. 16M] Length = 780 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 348/775 (44%), Positives = 457/775 (58%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 4 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 63 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 64 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 123 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 124 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 183 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 184 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 243 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 244 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 303 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 304 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 363 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 364 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 423 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 424 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 483 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 484 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 543 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 544 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 603 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 604 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 663 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 664 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 723 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 724 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 778 >gi|260168178|ref|ZP_05754989.1| glycyl-tRNA synthetase subunit beta [Brucella sp. F5/99] Length = 777 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 349/775 (45%), Positives = 458/775 (59%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGGVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 775 >gi|294851785|ref|ZP_06792458.1| glycyl-tRNA synthetase beta subunit [Brucella sp. NVSL 07-0026] gi|294820374|gb|EFG37373.1| glycyl-tRNA synthetase beta subunit [Brucella sp. NVSL 07-0026] Length = 777 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 347/775 (44%), Positives = 456/775 (58%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATTYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I AH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQYAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 775 >gi|225626913|ref|ZP_03784952.1| glycyl-tRNA synthetase, beta subunit [Brucella ceti str. Cudo] gi|225618570|gb|EEH15613.1| glycyl-tRNA synthetase, beta subunit [Brucella ceti str. Cudo] Length = 780 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 349/775 (45%), Positives = 458/775 (59%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ Sbjct: 4 MPDLLLELFSEEIPARMQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLALDIRGLT 63 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 64 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 123 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 124 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 183 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 184 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 243 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 244 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 303 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 304 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 363 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 364 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 423 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 424 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 483 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 484 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 543 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 544 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGGVDGEQDVDNALANYEKEIRAEAEAS 603 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 604 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 663 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 664 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 723 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 724 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 778 >gi|121602631|ref|YP_988699.1| glycyl-tRNA synthetase subunit beta [Bartonella bacilliformis KC583] gi|120614808|gb|ABM45409.1| glycyl-tRNA synthetase, beta subunit [Bartonella bacilliformis KC583] Length = 740 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 336/739 (45%), Positives = 460/739 (62%), Gaps = 37/739 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA DL + L + G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAADLKKCVTNKLVDAGLTYKAACEYWTPRRLTLDIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + ++ IDGFLR+TGL IS+ I D KKGD Y+A + K R+ Sbjct: 61 TKSQDIYEERKGPSTQSPQQVIDGFLRATGLNNISEAHIAHDNKKGDFYIAKIIKKGRIA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ I+P ++ PWPKSMRW + A WIR L++ILC+ + + II + Sbjct: 121 EDIIAEILPDILRNFPWPKSMRWGEDSAKSGALRWIRSLQNILCVFGPQCGETHIIPFTI 180 Query: 181 KEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + PI ++ D YI LE V+LD E R+N IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSDGKPIPIRRFDDYIAQLEAHKVILDAERRKNIILVDAKNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELVED L+EE+ GLVEW V MG+FDK +L +P E+IRLTI+ NQKCFVTR + + Sbjct: 241 GLELVEDDPLIEEVAGLVEWPVVLMGNFDKAFLDIPPEIIRLTIRANQKCFVTRKQGEKT 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ F+LVSNI ASD G I++GNS+VV ARL DAL+FW++DQ +L N++ LK SA KF Sbjct: 301 KLSSHFVLVSNILASDEGKEIIKGNSKVVHARLSDALYFWQKDQCDLFNIADLKSSAEKF 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A LD L+V FHAK+GTQGE+V RI L +KIA ++ AD L RA VL Sbjct: 361 DLDLNKPLDQRIANLDRLNVTFHAKLGTQGEKVERISALVQKIAPIVQADSTLAKRAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEIV EFPELQG +GK YA+LQ E+ +AIE+H +P GP + +P ++I V Sbjct: 421 AKADLQTEIVNEFPELQGFMGKTYALLQGEDPRVAEAIEDHYRPLGPTDRIPQEPVTIAV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------ 531 +LADK+DTL+ FW INEKP+ SKDPYALRRA LG+I+++L + I L+ Sbjct: 481 ALADKIDTLVGFWLINEKPTSSKDPYALRRAALGVIKLVLSHNCKINLTSLFHQAINIFL 540 Query: 532 ----------------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +L+ F H+RLK++L D +RHD+IEA+L Sbjct: 541 QQKTEYAAYLKESKQTQDTLVKEIDDILSDLLSFLHERLKIHLKDEGVRHDIIEAVLTKN 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D+ IV I+ L F ++ G L + KR IL E KK E + I+ + + Sbjct: 601 ADDFSLIVHRIEVLTSFINTNNGNNLLAAIKRAVNILENESKKGNEFASTINLELFIENE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY I + + ++ + + L S+ EPI+ FF++VLVN + +R NRL+ Sbjct: 661 EKQLYQAIIAAEKKVNDHINTTDWLSALNALASLKEPIDKFFEKVLVNDKNAAIRANRLA 720 Query: 684 LLQYIKNIILIVINVQKIV 702 LL++I I + + KI+ Sbjct: 721 LLEFIHTITQDIADFSKII 739 >gi|148560042|ref|YP_001258428.1| glycyl-tRNA synthetase subunit beta [Brucella ovis ATCC 25840] gi|148371299|gb|ABQ61278.1| glycyl-tRNA synthetase, beta subunit [Brucella ovis ATCC 25840] Length = 777 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 347/775 (44%), Positives = 456/775 (58%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPY LRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYVLRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 775 >gi|126728902|ref|ZP_01744717.1| glycyl-tRNA synthetase subunit beta [Sagittula stellata E-37] gi|126710832|gb|EBA09883.1| glycyl-tRNA synthetase subunit beta [Sagittula stellata E-37] Length = 703 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 276/727 (37%), Positives = 397/727 (54%), Gaps = 52/727 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA DL ++ L E G+ Y + + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQARAAGDLKKMMTDGLVEAGLTYASAAAFHTPRRLCLTVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KA++GF+R G+ D +++ KKG Y A + P R Sbjct: 61 AESPTLKEERRGPKVGAPDKALEGFMRGAGVT--RDQLEEREDKKGAFYYATVTTPGRKA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ + ++ PWPKSMRW + W+RPL ILC++ E E ++DL++ Sbjct: 119 EAIVAEQLEKTVRGFPWPKSMRWG-----TGSLRWVRPLHRILCLMRDE-GGEHVVDLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF P +V S + Y L+ A V+L E R I NDA +A A G Sbjct: 173 DGIRAGRTTEGHRFMGGAPFEVTSFEDYAAKLKRAHVILSAEERAEHIWNDATNMAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L++VEDK LL E+ GLVEW V MG + +L LP E+++ ++K +QK F R + Sbjct: 233 LDVVEDKGLLAEVAGLVEWPVVLMGDIEDTFLGLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+NI+ +D GA I+ GN +V+AARL DA FW+ D + Sbjct: 293 EKFVTVANIETADNGATILAGNQKVLAARLSDAKFFWENDLRVAKDAG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L RL+ DV FH K+G+Q R+ RI L + +A + AD +A ++KA Sbjct: 341 ----LTAWTDRLE--DVTFHNKLGSQKARIERIAALARDLAPKVGADTDRAAQAAEVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A +EH P GP ++VPT S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPADVAAACQEHYSPLGPSDDVPTAPTSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ------------- 527 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++L N + I LS Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLGNGLRISLSDVISEALENVGAAR 514 Query: 528 -----------FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIK 575 +D +L+ FFHDRLK+YL D+ + HD+I+A L ND+L +V + Sbjct: 515 PNPQDEDDYTGLDKDLDLLAFFHDRLKVYLRDQGVSHDVIDASLAMDGNDDLTLLVKRAE 574 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDF 634 L + G + KR IL E+K+ E S ++ + E+ L+ + Sbjct: 575 ALAAVMQTEDGRNLVQGFKRANNILTQAEEKDGVEYSFGADVKFAETDEERALFEALDAA 634 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I +M + + + + ++ PI+ FFD V VN ++ VR NRL+LL I+ L Sbjct: 635 DKKIAPAMQAEDFTAAMEAMATLRAPIDAFFDAVQVNSENSVVRRNRLNLLSRIRQTCLQ 694 Query: 695 VINVQKI 701 + ++ KI Sbjct: 695 IADLTKI 701 >gi|256368860|ref|YP_003106366.1| glycyl-tRNA synthetase, beta subunit [Brucella microti CCM 4915] gi|255999018|gb|ACU47417.1| glycyl-tRNA synthetase, beta subunit [Brucella microti CCM 4915] Length = 777 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 348/775 (44%), Positives = 457/775 (58%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDMHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 775 >gi|256159111|ref|ZP_05456932.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] gi|256254450|ref|ZP_05459986.1| glycyl-tRNA synthetase subunit beta [Brucella ceti B1/94] gi|265997583|ref|ZP_06110140.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] gi|262552051|gb|EEZ08041.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] Length = 777 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 349/775 (45%), Positives = 458/775 (59%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLVLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 775 >gi|254718585|ref|ZP_05180396.1| glycyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|265983560|ref|ZP_06096295.1| glycyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|306839898|ref|ZP_07472696.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. NF 2653] gi|264662152|gb|EEZ32413.1| glycyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|306405084|gb|EFM61365.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. NF 2653] Length = 777 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 346/775 (44%), Positives = 455/775 (58%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFL GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLCKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDEAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLATENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVYLKDEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEEDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ +++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREAGDAIVRED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 775 >gi|62289391|ref|YP_221184.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 1 str. 9-941] gi|82699319|ref|YP_413893.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis biovar Abortus 2308] gi|189023643|ref|YP_001934411.1| glycyl-tRNA synthetase subunit beta [Brucella abortus S19] gi|237814878|ref|ZP_04593876.1| glycyl-tRNA synthetase, beta subunit [Brucella abortus str. 2308 A] gi|254688705|ref|ZP_05151959.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 6 str. 870] gi|254729738|ref|ZP_05188316.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 4 str. 292] gi|256256952|ref|ZP_05462488.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|260545857|ref|ZP_05821598.1| glycyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260754182|ref|ZP_05866530.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 6 str. 870] gi|260757402|ref|ZP_05869750.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 4 str. 292] gi|260883207|ref|ZP_05894821.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|297247804|ref|ZP_06931522.1| glycyl-tRNA synthetase beta subunit [Brucella abortus bv. 5 str. B3196] gi|62195523|gb|AAX73823.1| GlyS, glycyl-tRNA synthetase, beta subunit [Brucella abortus bv. 1 str. 9-941] gi|82615420|emb|CAJ10389.1| Glycyl-tRNA synthetase, beta subunit:Heterodimeric glycyl-transfer RNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189019215|gb|ACD71937.1| Glycyl-tRNA synthetase, beta subunit [Brucella abortus S19] gi|237789715|gb|EEP63925.1| glycyl-tRNA synthetase, beta subunit [Brucella abortus str. 2308 A] gi|260097264|gb|EEW81139.1| glycyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260667720|gb|EEX54660.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 4 str. 292] gi|260674290|gb|EEX61111.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 6 str. 870] gi|260872735|gb|EEX79804.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|297174973|gb|EFH34320.1| glycyl-tRNA synthetase beta subunit [Brucella abortus bv. 5 str. B3196] Length = 777 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 347/775 (44%), Positives = 456/775 (58%), Gaps = 74/775 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E + I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERCKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 298 -------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI-----------EDQNLILF-----------------FHDRLKLYLHD-------- 548 L + L F + L Y + Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 549 ----------------------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 775 >gi|240850063|ref|YP_002971456.1| glycyl-tRNA synthetase subunit beta [Bartonella grahamii as4aup] gi|240267186|gb|ACS50774.1| glycyl-tRNA synthetase subunit beta [Bartonella grahamii as4aup] Length = 740 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 333/739 (45%), Positives = 456/739 (61%), Gaps = 37/739 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA DL + L G+IY+ R+YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAADLKKSVTDQLVNAGLIYEAAREYWTPRRLTLDIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + + IDGFLR+TGL IS+ I D KKG Y+A + K R Sbjct: 61 IRSKDIHEERRGPSIKSPQHVIDGFLRATGLNDISEAHIGHDDKKGHFYIAKIVKKGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PWPKSMRW + A WIRPL++ILC+ E + +I + Sbjct: 121 EEIIADILPNIIRNFPWPKSMRWGKDSAQSGALKWIRPLQNILCVFGPEIGETHVIPFTI 180 Query: 181 KEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + P +V+ D Y+ LE V+LD E R+N IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSDGKPFQVRRFDDYVTQLETHKVILDAERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELV+D LLEE+ GLVEW + MG FD+ +L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVQDNPLLEEVAGLVEWPVILMGDFDQSFLDIPPEIIRLTIRANQKCFVTRKQGEKV 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ FILVSNI ++D G I +GNS+VV ARL DAL+FW+ DQ +LP++ L+ S KF Sbjct: 301 KLSHHFILVSNILSNDEGKEISKGNSKVVRARLSDALYFWQTDQRDLPDIQQLESSIKKF 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LD+ KPLDQRMARLD L+V FHAK+GTQG RV RI L ++I+ LI D L RA +L Sbjct: 361 DLDIKKPLDQRMARLDHLNVTFHAKLGTQGARVERIATLAQEISPLIQTDPLLAKRAAIL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEIV EFPELQG +G++YA+LQ E+ AIE+H KP+GP + +P ++ITV Sbjct: 421 AKADLQTEIVGEFPELQGVMGQKYALLQGEDPRVAVAIEDHYKPQGPTDRLPQEPLAITV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 LADK+D L+ FW INEKP+GSKDPYALRRA LG+IR++L I L + Sbjct: 481 MLADKIDMLVGFWLINEKPTGSKDPYALRRAALGVIRLVLSRDWKINLMPLFQLAMNLFL 540 Query: 531 ---------------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +L+ FFHDRLK+YL + R+D +EA+L + Sbjct: 541 KQKNKYEISQRENSQLLNLLPEKTEYILSDLLFFFHDRLKIYLKEEGARYDALEAVLNKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +D+ L + ++ L F ++ G F+ S KR IL E +K+ I EI+P+ + + Sbjct: 601 SDDFLLVARRVESLIAFINTHDGMNFVASVKRTANILENEFQKSTTIVNEINPELFVEKE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY I + + ++ + +L + + I+IFF++VLVN +VR NRL+ Sbjct: 661 EKQLYHAICEVEKQVLAPINATNLSFVLSVLAPLGKLIDIFFEKVLVNDKKPDVRANRLA 720 Query: 684 LLQYIKNIILIVINVQKIV 702 LL+ I I V + K+V Sbjct: 721 LLKCIHIITQSVADFSKLV 739 >gi|49475213|ref|YP_033254.1| glycyl-tRNA synthetase subunit beta [Bartonella henselae str. Houston-1] gi|49238018|emb|CAF27224.1| Glycyl-tRNA synthetase beta chain [Bartonella henselae str. Houston-1] Length = 740 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 334/739 (45%), Positives = 459/739 (62%), Gaps = 37/739 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAADLKKSVTDQLVNAGLTYKAAHEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + IDGFLR+TGL IS I D KKGD Y+A + K R Sbjct: 61 IRSKDTHEERKGPSTKSPQHVIDGFLRATGLSDISKAHIAHDHKKGDFYIAKIVKKGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PWPKSMRW A WIR L++ILC+ E + +I + Sbjct: 121 EEIIADILPDIIRNFPWPKSMRWGKDSEKSGALKWIRSLQNILCVFGPEIGETHVIPFTI 180 Query: 181 KEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + P++V+ D Y+ LE V+LD E R+N IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSDGKPLQVRRFDDYVTQLEIHKVILDAERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELV+D LLEE++GL+EW V MG+FDK +L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVKDNALLEEVVGLIEWPVVLMGNFDKSFLNIPPEIIRLTIRANQKCFVTRKQGEKI 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ FILVSNI ASD G I +GNS+VV ARL DAL+FW+ DQ++LP++ L+ SA K Sbjct: 301 KLSHHFILVSNILASDEGKEISKGNSKVVCARLSDALYFWQTDQHDLPDIKYLQSSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL KPLDQRMA+LD L+V FHAK+GTQG RV RI +L ++IA L+ AD L RA VL Sbjct: 361 DLDLKKPLDQRMAQLDHLNVTFHAKLGTQGARVERITILAQQIAPLVHADPFLAKRAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEIV EFPELQG +G++YA+LQ E+ +AIE+H KP+GP + +P ++I V Sbjct: 421 AKADLQTEIVGEFPELQGLMGRKYALLQGEDPRVAEAIEDHYKPQGPADRIPQEPLAIAV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----- 532 +LADK+D L+ FW INEKPS SKDPYALRRA LG+IR++L I L Sbjct: 481 ALADKIDMLVGFWLINEKPSSSKDPYALRRAVLGVIRLVLLRDWKINLMPLFNLTANLFL 540 Query: 533 -----------------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +L+ FFH+RLK+YL + R+D++EA+L+ + Sbjct: 541 QQKTPYGTSRREATQSQNVLPEKTEHILSDLLSFFHERLKIYLKEEGARYDVLEAVLKKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D+LL I ++ L F +++ G+ FL + KR IL E +K+ I EI+P+ + Sbjct: 601 ADDLLLIARHVEALIAFINTSDGDSFLAAVKRTVNILEAESQKDSTIEDEINPELFIETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY I++ + S++ + + L + + I+ FF++VLVN + VR NRL+ Sbjct: 661 EKQLYQAITEIEKTVHHSINATNLPHLLNTLTPLGKFIDTFFEKVLVNDKNPHVRTNRLA 720 Query: 684 LLQYIKNIILIVINVQKIV 702 LL+ I + + K+V Sbjct: 721 LLKRIHTLTQKAADFSKLV 739 >gi|118590816|ref|ZP_01548217.1| glycyl-tRNA synthetase subunit beta [Stappia aggregata IAM 12614] gi|118436792|gb|EAV43432.1| glycyl-tRNA synthetase subunit beta [Stappia aggregata IAM 12614] Length = 695 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 304/720 (42%), Positives = 418/720 (58%), Gaps = 46/720 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L + G+ Y+ + + TP RL L++ G+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAEDLKSLVTNALVDAGLPYEGAKAFATPRRLALHVAGVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA +KA++GFLR GL +I I+ DPKKGD Y+AV+ KP R Sbjct: 61 AGSAATREERKGPRVGAPEKALEGFLRGAGLTSIDQATIQTDPKKGDFYVAVIEKPGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ +P ++ PWP +MRW + W+RPL SI+ E + ++ + Sbjct: 121 IDVIAEFMPGILRNFPWPITMRWGAATT-----RWVRPLHSIVATFGPETEEPDVVSFEF 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF A V+ D Y LE+ V+LD + R++ I NDA A A+G Sbjct: 176 DGIKAGKTTRGHRFLADEAFDVRRFDDYAPALEKHKVVLDADRRKDIIQNDAKDCALALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 L+LVED LLEE+ GLVEW V GSFD+ +L +P+E I+LTIK NQKCFV + G L Sbjct: 236 LDLVEDPGLLEEVAGLVEWPVVLTGSFDEDFLTIPDECIQLTIKVNQKCFVLKNPATGRL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+L+SNI A DGG IV GN +V+ ARL DA FW+ D Sbjct: 296 ANKFVLISNIIADDGGKLIVAGNEKVIRARLSDARFFWETD------------------- 336 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L + +LD +V FH K+G+ GERV R+ L ++A + AD RA L+K Sbjct: 337 -LKSKLSDNLPKLD--EVKFHEKLGSVGERVKRMIALSAELAPVAGADETKAKRAAELAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G+ YA Q E+ S AIEEH KP+GP ++VPT+ +++ V+L Sbjct: 394 ADLVSNMVFEFPELQGLMGRYYATAQGEDASVATAIEEHYKPQGPSDSVPTDPVAVAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 A+KLD L FWAI+EKP+GSKDPYALRRA LG+IRI+LEN + I L + Sbjct: 454 AEKLDLLAGFWAIDEKPTGSKDPYALRRAALGVIRIVLENNLRIRLGDILRSALDLQGVK 513 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFS 582 +L+ FF DRLK++L D RHDLI+AI D++L +V ++ L +F S Sbjct: 514 TADPAALVADLLSFFADRLKVHLRDEGARHDLIDAIFALEGQDDVLMVVRRVEALGKFVS 573 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S G L KR IL EEKK+ +S + P + +AE L A I ++ Sbjct: 574 SDDGTNLLAGYKRAVNILKAEEKKDGAAVSGKPHPDHFQEQAEIDLAAAIDVARAEAADA 633 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + L + P++ FF +LVN +D +R NRL LL I++ +V + K+ Sbjct: 634 VASENFEGAMEALSKLRAPVDRFFVDILVNAEDATLRMNRLQLLAEIRDATHVVADFSKV 693 >gi|83952444|ref|ZP_00961175.1| glycyl-tRNA synthetase beta subunit [Roseovarius nubinhibens ISM] gi|83836117|gb|EAP75415.1| glycyl-tRNA synthetase beta subunit [Roseovarius nubinhibens ISM] Length = 692 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 285/716 (39%), Positives = 408/716 (56%), Gaps = 41/716 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAAEDL + L E G+ Y + TP RL L ++G+ Sbjct: 1 MPDLLIELFSEEIPARMQAKAAEDLRQRVTDGLVEAGLTYAGAASFSTPRRLTLAIEGML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPRV A +KAI+GFLR G+ D +D KKG VY AV+ KP R Sbjct: 61 AQSPTLREERKGPRVDAPEKAIEGFLRGAGVS--RDELEVRDEKKGQVYFAVISKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++ I+ PWPKSMRW + W+RPL SILC++ + + I+ +D+ Sbjct: 119 EEIVAEVLEQTIRNFPWPKSMRWGAG-----SLRWVRPLHSILCLMTNDAGEAHIVPMDV 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V S + Y L+ A V+LDPE R AI +A LA A G Sbjct: 174 DGITAGDSTEGHRFMAPGRFAVTSFEDYAAKLKRAYVVLDPEERAQAIWQEASNLAFAAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 +ELVEDK LL E+ GLVEW MG+ D+ +L LP E+++ ++K +QK F + + Sbjct: 234 MELVEDKGLLREVAGLVEWPVPLMGAIDEAFLGLPPEVLQTSMKEHQKFFSVKNPKTGRI 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW+ D + Sbjct: 294 EKFVTVANRETADHGATILAGNQKVLSARLADAKFFWENDLREAEAGGT----------- 342 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +A LD +V FH K+G+Q R+ RI L ++IA + AD L ++A +KA Sbjct: 343 ------AWLASLD--NVTFHNKLGSQAARIDRIAALAREIAGVTGADADLAEQAARWAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A +EH P GP ++VPT +S+TV+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEKAGLPAEVAGAAQEHYSPLGPSDDVPTAPVSVTVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + + + + I Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENGLSLNMDEAIAKGLGQQPGAT 514 Query: 532 ----QNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKG 586 +L+ F HDRLK+YL D +RHD+I+A L ND+L +V + L E + G Sbjct: 515 DGAAADLLSFIHDRLKVYLRDEGLRHDVIDACLAMEGNDDLALVVKRARALGEMLGTEDG 574 Query: 587 EKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E L KR IL+ E K+ E S ++ E E+ L+A + I ++ + Sbjct: 575 ENLLQGFKRANNILSQAEDKDGVEYSYGADVKFAETEEERALFAALDAAEPKIAAALKAQ 634 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ + ++ PI+ FF+ V VN D VR NRL+LL I+ ++ V ++ ++ Sbjct: 635 DFNAAMAAMAALRAPIDAFFEAVQVNTDKDVVRRNRLNLLSRIRGLVGSVADLTRV 690 >gi|163742176|ref|ZP_02149564.1| glycyl-tRNA synthetase subunit beta [Phaeobacter gallaeciensis 2.10] gi|161384506|gb|EDQ08887.1| glycyl-tRNA synthetase subunit beta [Phaeobacter gallaeciensis 2.10] Length = 704 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 287/728 (39%), Positives = 415/728 (57%), Gaps = 53/728 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRMTDGLVEAGLTYAGAHALSTPRRLTLAMEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA KAI+GFLR GL D +++ KG VY A++ KP R Sbjct: 61 EHSPTVREERKGPKVGAPDKAIEGFLRGAGLT--RDQLEERETPKGAVYFALIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PW KSMRW + W+RPL+SI+C+L ED +++ L++ Sbjct: 119 AEIIAEVLEDTIRNFPWSKSMRWG-----TGSLRWVRPLQSIVCLLSKED-GAEVVPLNI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GNITYGHRF AP I V D Y L+ A V+LDP R AI +A A A G Sbjct: 173 DGIASGNITYGHRFIAPDQITVTGFDDYAAKLKRAHVVLDPAEREAAIWQEATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG+ D ++L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLMGAIDDEFLALPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D + Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFWENDLRTVTE-------------- 338 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + + + +L +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 339 --QGFEPWVGKLG--NVTFHNKLGTQAARIDRIAALAREIALVVGADADLAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A E H P GP ++VPT +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPQDVAKACEAHYSPLGPSDDVPTEPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + + L + I Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENDVRMGLREIIGLHFSAMENSL 514 Query: 533 -----------------NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLI 574 NL+ FFHDRLK++L D+ IRHD+I+A + ND+L +V + Sbjct: 515 PADVKKTEHWDAILVEQNLLFFFHDRLKVFLRDQGIRHDVIDACIAMNGNDDLTLLVKRV 574 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISD 633 + L +F +S G L KR ILA E+K+ E S ++ ++E L+ ++ Sbjct: 575 RALEDFMASDDGPNLLQGFKRANNILAQAEEKDGVEYSYGADKKFAEDDSEIPLFDALAQ 634 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 I +++ + + + ++ P++ FF+ V VN D+ VR NRL+LL I+ + Sbjct: 635 SEGAISSAIEAEDFAAAMGSMAALRVPVDAFFEAVQVNSDNEVVRRNRLNLLSQIRKVCG 694 Query: 694 IVINVQKI 701 V ++ +I Sbjct: 695 QVADLTRI 702 >gi|83955610|ref|ZP_00964190.1| glycyl-tRNA synthetase beta subunit [Sulfitobacter sp. NAS-14.1] gi|83839904|gb|EAP79080.1| glycyl-tRNA synthetase beta subunit [Sulfitobacter sp. NAS-14.1] Length = 706 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 281/729 (38%), Positives = 408/729 (55%), Gaps = 53/729 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L + G+ Y + + TP RL L ++G+ Sbjct: 1 MPDLLIELFSEEIPARMQARAADDLKKLVTNGLVDAGLTYASAAAFSTPRRLTLTIEGML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GP+ A +KAI+GFLR GL D ++D KG + A++ KP R Sbjct: 61 DASPSLVEERKGPKADAPEKAIEGFLRGAGLT--RDQLEERDTPKGKILFAMINKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + + W+RPL SILCIL AED + + L + Sbjct: 119 AEIVADVLETTIRNFPWPKSMRWGSG-----SLRWVRPLHSILCILSAED-GAQTVPLTI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP I V S D Y L+ A V+LDP RR+ I NDA +A A G Sbjct: 173 DGITAGDTTRGHRFLAPDTITVSSFDDYSAKLKRAFVVLDPAERRDTIWNDATNMAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVE+ V MG +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAGLLAEVAGLVEYPVVLMGQIGDDFLGLPPEVLQTSMKEHQKFFSVRNPKSGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW+ D + + ++ Sbjct: 293 ERFVTVANRTTADDGATILAGNEKVLSARLSDAKFFWENDLRIAQSEAGMQT-------- 344 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + RL +V FH K+GTQ E +SR+ L ++A + AD A +KA Sbjct: 345 -------WVDRLS--NVTFHNKLGTQAELISRMEALAGELAPTVGADAEEARAAARFAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G YA ++ + A ++H P GP ++VPT +SI V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGSYYAKAAGKSEAIAAAAQDHYAPLGPSDDVPTAPVSIAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 +K+D L FWAI+EKP+GSKDP+ALRRA LG+IRI++EN + + L I + Sbjct: 456 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRILVENDVSLKLRDTILEHLSQAPAPA 515 Query: 533 ---------NLILFFHDRLKLYLHDRDIRHDLIEAILRP----------ENDNLLTIVDL 573 NL+ F HDRLK+YL D+ +RHD+I+A + ND+L +V Sbjct: 516 AGSAEETAENLLSFLHDRLKVYLKDQGVRHDIIDACISSSDGAPAGATEGNDDLTLLVKR 575 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVIS 632 K L+E + GE + KR IL+ E + E S ++ E E+ L+A + Sbjct: 576 AKALSETLKTDDGENLIQGFKRANNILSQAEDADGVEYSFGADIKFAETEEERALFAALD 635 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 I+ +M+ + + + S+ PI+ FFD V VN D+ VR NRL+LL I+ I Sbjct: 636 TAEAQIKPAMEAQDFGTAMSAMASLRGPIDAFFDAVQVNADNATVRRNRLNLLSRIRTIC 695 Query: 693 LIVINVQKI 701 V ++ KI Sbjct: 696 SSVADLTKI 704 >gi|89070594|ref|ZP_01157878.1| glycyl-tRNA synthetase beta subunit [Oceanicola granulosus HTCC2516] gi|89043811|gb|EAR50012.1| glycyl-tRNA synthetase beta subunit [Oceanicola granulosus HTCC2516] Length = 694 Score = 660 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 272/720 (37%), Positives = 410/720 (56%), Gaps = 47/720 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KA++DL ++ L E G+ Y + + TP RL L+++GL+ Sbjct: 1 MPDLLIELLSEEIPARMQAKASDDLKKMVTDGLVEAGLTYASAAAFATPRRLVLHVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ +ER GP+VGA KA++GF R G+ + ++D KG + AV+ + R Sbjct: 61 AESPDTRDERRGPKVGAPDKAVEGFCRGAGVDRAALE--ERDTGKGAFWFAVIERKGRKA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ ++ PWPKSMRW + + W+RPL SILCIL E +++ L++ Sbjct: 119 ADIVAEVLETTVRGFPWPKSMRWGSG-----SLRWVRPLSSILCILSDE-GGAEVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 G +T GHRF AP I V + Y L+ A V+L P+ R AI NDA +A + G Sbjct: 173 DGQRAGAVTRGHRFMAPGEISVGDFEDYEAKLKRAKVMLRPDERAEAIWNDATNMAFSAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG + +L LP E+++ ++K +QK F R +G + Sbjct: 233 LEVVEDKGLLREVAGLVEWPVVLMGEIGESFLGLPPEVLQTSMKEHQKFFSVRAPDGRIT 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+NI+ +D GA I+ GN +V+AARL DA FW+ D Sbjct: 293 -RFVTVANIETADDGATILAGNQKVLAARLSDAKFFWENDLRVAEAG------------- 338 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 ++ + L +V F ++G+Q +R+ RI L + +A + AD L ++A ++KA Sbjct: 339 ----MEPWLEALG--NVTFERRLGSQQDRIGRIATLARALAGPVGADPELAEKAARVAKA 392 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y+ A EEH P GP + VPT +S+ V+LA Sbjct: 393 DLSSEMVYEFPELQGLMGRYYSAAAGLPDEVARACEEHYSPLGPSDAVPTAPVSVAVALA 452 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------- 529 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + + L Sbjct: 453 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLTNDLRLSLKDIFRDSAQIVSEQL 512 Query: 530 ------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFS 582 + +L+ FFHDRLK++L D IRHD+I+A+ P ND+L +V + L++ Sbjct: 513 QGDITTDTDDLLAFFHDRLKVHLRDEGIRHDVIDAVTAMPGNDDLALLVARARALSDVLK 572 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + GE L +R IL+ E + E S ++ +AEK L+A + + I ES Sbjct: 573 TDDGENLLQGFRRANNILSQAEAADGVEYSYGADVKFAESDAEKALFAALDEAEPKIAES 632 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + + PI+ FF+ V VN D++ +R NRL+LL I+ I L V ++ ++ Sbjct: 633 LAREDFAAAMAAMAGLRGPIDAFFEDVQVNSDNQVLRRNRLNLLSRIRQICLSVADLTRV 692 >gi|85703625|ref|ZP_01034729.1| glycyl-tRNA synthetase beta subunit [Roseovarius sp. 217] gi|85672553|gb|EAQ27410.1| glycyl-tRNA synthetase beta subunit [Roseovarius sp. 217] Length = 725 Score = 659 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 282/748 (37%), Positives = 398/748 (53%), Gaps = 72/748 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAAEDL L L E G+ Y + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQTKAAEDLRARLTEALVEAGLTYAGAAAFSTPRRLALTVQGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPRV A +KAI+GFLR GL +D KKG VY A + KP R Sbjct: 61 GQSPTTREERKGPRVDAPEKAIEGFLRGAGLTREQLEI--RDEKKGQVYFATITKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ + I+ PWPKSMRW + W+RPL SILCIL E + K++DLD+ Sbjct: 119 AEIVAEELDRIIRNFPWPKSMRWGAG-----SLRWVRPLHSILCILTDEAGEVKVVDLDV 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF V S D Y L A V+L+ E R I +A A A G Sbjct: 174 DGIRAGNSTEGHRFMGAGRFAVTSFDDYRTKLRRAHVILEAEERAQHIWQEASNQAFASG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED LL E+ GLVEW V MG D+ +L LP E+++ ++K +QK F + + Sbjct: 234 LELVEDSGLLAEVAGLVEWPVVLMGRIDEAFLGLPPEVLQTSMKEHQKFFSVKNPKTGRI 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ +D GA I+ GN +V+AARL DA FW+ D + Sbjct: 294 ERFVTVANVETADQGATILAGNQKVLAARLSDAKFFWENDLRTVQ--------------- 338 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 ++ L+ A L V FH K+G+Q +R++RI L ++IA + AD L ++A ++KA Sbjct: 339 -AQGLEGMGAGL--AHVTFHNKLGSQADRIARIAALAREIAPHVGADADLAEQAAKVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G+ YA A +EH P GP + VP+ +S+ V+LA Sbjct: 396 DLQSAMVGEFPELQGLMGRYYAAAAGLPAEVAAACQEHYSPLGPGDAVPSAPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 DK+DTL FWAI+EKP+GSKDPYALRRA LG+ R+++ ++ + L + Sbjct: 456 DKIDTLTGFWAIDEKPTGSKDPYALRRAALGVDRLVVHGQLSVKLLDVLTGSFNRVGIAI 515 Query: 533 -------------------------------------NLILFFHDRLKLYLHDRDIRHDL 555 NL+ F HDRLK++L D IRHD+ Sbjct: 516 SETASQNKQKLGGINISGGAFQVLPEVDGRRVDARAVNLLSFLHDRLKVHLKDDGIRHDV 575 Query: 556 IEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLE 613 I+A L ND+L +V L +F + GE L KR IL E K+ E S Sbjct: 576 IDACLAMEGNDDLTLLVKRATALADFLKTDDGENLLQGFKRANNILTQAEAKDGVEYSYG 635 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 ++ + EK L+A ++ I ++ + + + ++ PI+ FF V VN + Sbjct: 636 ADVKFAETDEEKALFAALATAEPAIAIALKSEDFAGAMGAIAALRAPIDAFFTAVQVNAE 695 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKI 701 + +R NRL+LL I++I L ++ +I Sbjct: 696 SQVIRRNRLNLLSSIRHICLQAADLTRI 723 >gi|163867855|ref|YP_001609059.1| glycyl-tRNA synthetase subunit beta [Bartonella tribocorum CIP 105476] gi|161017506|emb|CAK01064.1| glycyl-tRNA synthetase beta chain [Bartonella tribocorum CIP 105476] Length = 740 Score = 659 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 337/738 (45%), Positives = 455/738 (61%), Gaps = 37/738 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA +L + L G+ Y+ R+YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAANLKKTVTDQLVNAGLTYKAAREYWTPRRLTLDIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + AIDGFLR+TGL IS+ I D KKGD Y+A + K R Sbjct: 61 IRSKDVHEERKGPSTKSPQYAIDGFLRATGLNDISEAHIGHDDKKGDFYIAKIVKKGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E++L I+P I+ PWPKSMRW + A WIRPL++ILCI E + +I + Sbjct: 121 EEILADILPDIIRNFPWPKSMRWGKDSAKSGALKWIRPLQNILCIFGPEIGETHVIPFTI 180 Query: 181 KEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + P +V+ D Y+ LE V+LD E R+N IL DA L A Sbjct: 181 GSLESNNLTYGHRFLSDGKPFQVRRFDDYVTQLETHKVILDAERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLEL++D+ LLEE+ GLVEW + MG FDK +L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELIQDEALLEEVAGLVEWPVILMGDFDKSFLDIPPEIIRLTIRANQKCFVTRKQGEKI 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ FILVSNI A+D G I +GNS+VV ARL DAL+FW++DQ +LP++ L+ S KF Sbjct: 301 KLSHHFILVSNILANDEGKEISKGNSKVVRARLSDALYFWQKDQRDLPDIQQLESSIKKF 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LD+ KPLDQRMARLD L+V FHAK+GTQ RV RI L +KIA LI AD L +RA +L Sbjct: 361 DLDIKKPLDQRMARLDHLNVTFHAKLGTQSARVERIATLAQKIAPLIQADPLLANRAAIL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEIV EFPELQG +G +YA+LQ E+ AIEEH KP+GP + +P ++IT+ Sbjct: 421 AKADLQTEIVGEFPELQGVMGHKYALLQGEDPRVAVAIEEHYKPQGPADRLPQEPLAITI 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 LADK+D L+ FW INEKP+GSKDPYALRRA LGIIR+IL I L + Sbjct: 481 MLADKIDMLVGFWLINEKPTGSKDPYALRRAALGIIRLILSRDWKINLMPLFQLATNLFV 540 Query: 531 ---------------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +L+ FFHDRLK+YL + R+D +EA+L + Sbjct: 541 QQKNKYEISQRENPQLQNLLPETTEVILSDLLFFFHDRLKIYLKEEGARYDALEAVLNKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +D+ L + ++ L F ++ G F+ S KR IL E +K+ I+ EI+P+ + Sbjct: 601 SDDFLLVARHVESLIAFINTHDGMNFVASVKRTANILQNELQKSTTIANEINPELFFEKE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY I + + ++ +L + + I++FF++VLVN +VR NRL+ Sbjct: 661 EKQLYHAICEVEKKVLAPINITNLSFALGILAPLGKLIDLFFEKVLVNDKKPDVRANRLA 720 Query: 684 LLQYIKNIILIVINVQKI 701 LL+ I V + K+ Sbjct: 721 LLKRTHTITQAVADFSKL 738 >gi|78484700|ref|YP_390625.1| glycyl-tRNA synthetase, beta subunit [Thiomicrospira crunogena XCL-2] gi|78362986|gb|ABB40951.1| glycyl-tRNA synthetase, beta subunit [Thiomicrospira crunogena XCL-2] Length = 690 Score = 657 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 212/723 (29%), Positives = 347/723 (47%), Gaps = 61/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FL+EI +EE+P + K + + L + + Y Y +P RL + + L Sbjct: 6 AEFLVEIGTEELPPKALKKLSNAFMDGIKAGLDDAELNYGETAVYASPRRLAVRIDALQT 65 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +K ER GP G KA+ GF R G +I+ +KG + L Sbjct: 66 KQADKTVERKGPAKKAAFDAEGQPTKALQGFARGCGADVADLSEIE--TEKGIWMVYYLE 123 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L ++L IV ++ K+P PK MRW + ++RP+ L +L ++ Sbjct: 124 QKGQLTAELLPAIVNQSLAKLPIPKRMRWGASD-----VEFVRPVHWALMLL-----DDQ 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAH 233 ++ + N T+GHRFHAP I++ Y+ L+ + V D E R+ I Sbjct: 174 VVPATILGHQTSNKTHGHRFHAPQAIEICKPSEYVSVLKEQGYVQADFEERKARIREQVE 233 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A + G D DLL+E+ L EW +G FD+ +L +P E + +K +QK F Sbjct: 234 AVAQSAGGVADIDDDLLDEVTALNEWPTAVVGDFDESFLSVPSEALISAMKGHQKYFHIL 293 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI +SNI++S ++ GN RV+ RL DA FW +D+ Sbjct: 294 DKAGQLMAKFITISNIESS-NPESVKNGNERVIRPRLSDAKFFWNQDR------------ 340 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 +PLD + RL VVF K+GT ++V R+ L KI + + D +++R Sbjct: 341 --------KQPLDDFLPRLKT--VVFQQKLGTLYDKVERLETLVVKIGRPLGEDAQVLER 390 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A LSK DL TE+V EFP+LQG +G+ YA QNE++ DAI+ +PR + +P + + Sbjct: 391 AARLSKCDLMTEMVGEFPDLQGVMGRYYAQAQNEDVKVADAIDGQYQPRFAGDQLPDSVV 450 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 S +++ADKLDT+ + I + P+G KDP+ALRR+ LG++RI++E ++D+ L I Sbjct: 451 SQALAIADKLDTITGIYGIGQVPTGDKDPFALRRSALGLVRILIEKELDLDLQLMIRFSL 510 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + F RLK Y + + + EA+ + L I+ + Sbjct: 511 DLHSEIDTSEALVMEIYDFIISRLKAYYAGKGVSAEQFEAVRVCAPSHPLDFAKRIEAVC 570 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 +F + E + KRI IL K + + E+ ++E+ L+ + + Sbjct: 571 QFSEMDEAESLSAANKRIANILK---KVDATLPEEVESSLFEEDSERDLFDALDALRETV 627 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y LL +I +P++ FFD V+V DD V+ NRL+LL I + V ++ Sbjct: 628 SNKIAERDYAGAMQLLATIRQPVDAFFDNVMVMADDEAVKLNRLALLNQIYQLFRQVADI 687 Query: 699 QKI 701 ++ Sbjct: 688 SRL 690 >gi|319408196|emb|CBI81849.1| glycyl-tRNA synthetase beta chain [Bartonella schoenbuchensis R1] Length = 740 Score = 657 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 331/738 (44%), Positives = 452/738 (61%), Gaps = 37/738 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LLE++SEEIPARMQ KAA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MSNLLLELFSEEIPARMQRKAASDLKKCVTDQLVHAGLTYKAACEYWTPRRLTLDIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + IDGFLR+TGL IS+ I D KKGD Y+A + K R Sbjct: 61 TSSQDTHEERRGPSTKSPQHMIDGFLRATGLNNISEAHIVHDSKKGDFYVAKITKKGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PWPKSMRW + A W+R L++ILC+ E + I+ + Sbjct: 121 EEIIADILPDIIRNFPWPKSMRWGQDSAQTGALKWVRSLQNILCVFGPEIGETHIVPFTV 180 Query: 181 KEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + PI+++ D Y+ LE V+LD E R+N IL DA L A Sbjct: 181 GFLKSNNLTYGHRFLSDGKPIQIRRFDDYVTLLEAHKVILDTERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELV+D LLEE+ GLVEW V MG FDK +L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVQDNALLEEVAGLVEWPVVLMGDFDKTFLDIPPEIIRLTIRANQKCFVTRKQGEKI 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILVSN+ A+DGG I +GNS+VV ARL DAL+FW+ DQ++LP+++ LK+SA KF Sbjct: 301 KLSNHFILVSNVLANDGGKEITKGNSKVVRARLSDALYFWQTDQHDLPDIAHLKDSAAKF 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A+LD L+V FHAK+GTQG RV RI L +KIA L+ AD L RA +L Sbjct: 361 DLDLNKPLDQRIAQLDYLNVTFHAKLGTQGARVERIAALAQKIAPLVQADPLLAKRAAIL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL T IV EFPELQG +G++YA+LQ E+ +AIE+H KP GP + +P I+I V Sbjct: 421 AKADLQTGIVAEFPELQGLMGRKYALLQGEDPHVAEAIEDHYKPLGPTDRIPCEPIAIAV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------ 531 +LADK+D L+ FW INEKP+ SKDPYALRRA LGII+++L I L + Sbjct: 481 ALADKIDILVGFWLINEKPTSSKDPYALRRAALGIIKLVLSRDWKINLMPLFDQAVDLFL 540 Query: 532 ----------------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +L+ F H+RLK+YL D R+D IEA+L + Sbjct: 541 QQKIKYTSPKIEAKQQQNTLSETKKDILSDLLSFLHERLKIYLKDEGARYDAIEAVLTKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D+ L + I+ L F ++ G FL S KR+ IL + K+ ++P+ Sbjct: 601 ADDFLLVARCIESLIVFINTNDGNDFLASVKRVVNILENQPSKDITTINTLNPELFSEIE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY I D + + + + L + +PI+ FF++VLVN + +R NRL+ Sbjct: 661 EKQLYQAIIDAEKKLHDQTNATNLSLALNALVPLKKPIDTFFEKVLVNDKNSAIRANRLA 720 Query: 684 LLQYIKNIILIVINVQKI 701 LL+ I+ I V + K+ Sbjct: 721 LLERIRLITQNVADFSKL 738 >gi|83942787|ref|ZP_00955248.1| glycyl-tRNA synthetase, beta subunit [Sulfitobacter sp. EE-36] gi|83846880|gb|EAP84756.1| glycyl-tRNA synthetase, beta subunit [Sulfitobacter sp. EE-36] Length = 706 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 279/729 (38%), Positives = 409/729 (56%), Gaps = 53/729 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L + G+ Y + + TP RL L ++G+ Sbjct: 1 MPDLLIELFSEEIPARMQARAADDLKKLVTNGLVDAGLTYASAAAFSTPRRLTLTVEGML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GP+ A +KAI+GFLR GL D ++D KG + A++ KP R Sbjct: 61 DASPSLVEERKGPKADAPEKAIEGFLRGAGLT--RDQLEERDTPKGKILFAMINKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + + W+RPL SILCIL AED + + L + Sbjct: 119 AEIVAEVLETTIRNFPWPKSMRWGSG-----SLRWVRPLHSILCILSAED-GVQTVPLTI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP I V S D Y L+ V+LDP RR+ I NDA +A A G Sbjct: 173 DGITAGDTTRGHRFLAPDTITVSSFDDYSAKLKRVFVVLDPAERRDTIWNDATNMAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVE+ V MG +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAGLLAEVAGLVEYPVVLMGQIGDDFLGLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW+ D + + ++ Sbjct: 293 ERFVTVANRTTADDGATILAGNEKVLSARLSDAKFFWENDLRIAQSEAGMQT-------- 344 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + RL +V FH K+GTQ E +SR+ L ++A ++ AD A +KA Sbjct: 345 -------WVDRLS--NVTFHNKLGTQAELISRMEALAGELAPMVGADAEEARAAARFAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G Y ++ + A ++H P GP ++VPT ++SI V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGSYYTKAAGKSEAIAAAAQDHYAPLGPSDDVPTARVSIAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 +K+D L FWAI+EKP+GSKDP+ALRRA LG+IRI++EN + + L I + Sbjct: 456 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRILVENDVSMKLRDTILEHLSQAPAPA 515 Query: 533 ---------NLILFFHDRLKLYLHDRDIRHDLIEAILRP----------ENDNLLTIVDL 573 NL+ F HDRLK+YL D+ +RHD+I+A + ND+L +V Sbjct: 516 AGSAEETAENLLSFLHDRLKVYLKDQGVRHDIIDACISSSDGAPAGATDGNDDLTLLVKR 575 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVIS 632 K L+E + GE + KR IL+ E +R E S ++ + E+ L+A + Sbjct: 576 AKALSETLKTDDGENLIQGFKRANNILSQAEDADRVEYSFGADIKFAETDEERALFAALD 635 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 I+ +M+ + + + S+ PI+ FFD V VN D+ VR NRL+LL I+ I Sbjct: 636 TAEAQIKPAMEAQDFGTAMSAMASLRGPIDAFFDAVQVNADNATVRRNRLNLLSRIRTIC 695 Query: 693 LIVINVQKI 701 V ++ KI Sbjct: 696 SSVADLTKI 704 >gi|319407554|emb|CBI81204.1| glycyl-tRNA synthetase beta chain [Bartonella sp. 1-1C] Length = 742 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 339/738 (45%), Positives = 452/738 (61%), Gaps = 37/738 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPA+MQ KAA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MPDLLLELFSEEIPAQMQRKAASDLKKCVTDKLINAGLTYKAACEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GP V + ++ ID FLR+TGL IS I D KKG+ Y+A K RL Sbjct: 61 KSSPDVHEERKGPNVQSPQQVIDAFLRATGLNDISKVHIAHDDKKGNFYIAKTTKKGRLA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I PWPKSMRW + + WIR L++ILC+ + + KII + Sbjct: 121 EEIIADILPDIIYNFPWPKSMRWGQESAKNGSLRWIRSLQNILCVFGSAIGETKIIPFTV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + PI+V+ D YI LE V+LD E R++ IL D L A Sbjct: 181 GSLKSNNLTYGHRFLSNGNPIQVRRFDDYISQLENHKVILDAERRKDIILADIQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT--REG 297 GLELVEDK LLEE+ GLVEW V MG+FDK +L +P E+IRLTI+T+QKCFVTR + Sbjct: 241 GLELVEDKALLEEVSGLVEWPVVLMGTFDKTFLSIPPEIIRLTIQTHQKCFVTRKRGEKS 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILVSNI ASD G I +GNS+VV ARL DAL+FW+ DQ NLPN L+ SA K Sbjct: 301 KLSNYFILVSNILASDKGIEISKGNSKVVHARLSDALYFWETDQCNLPNTMHLESSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A L L+V FHAK+GTQG R+ RI L + IA L+ AD L RA VL Sbjct: 361 DLDLNKPLDQRVAHLHYLNVTFHAKLGTQGARIERIAALTQTIAPLVQADSILAKRAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEI+ EFPELQG IG++YA+LQ E+ +AIE+H +P GP + +P I++TV Sbjct: 421 AKADLQTEIIGEFPELQGVIGRKYALLQGEDPLVAEAIEDHYRPLGPKDRIPITPIAVTV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----- 532 +LADK+DTLI FW INEKP+ SKDPYALRRA LG+I++IL N + I L Sbjct: 481 ALADKIDTLIGFWFINEKPTSSKDPYALRRAALGVIKLILSNDLKIRLIPLFHQAINFLL 540 Query: 533 -----------------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +L+ F H+RLK YL D RHD+IEA+L + Sbjct: 541 QQRVKYAASETKGVNLQNISVEKKENIVLDLLAFLHERLKGYLKDEGARHDIIEAVLTKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D++L I ++ L F +S G+ L++ KR IL E KK I ++ P+ + Sbjct: 601 ADDILLITRRVETLTFFINSNDGDSLLIAIKRAINILENETKKGMIIINKVKPELFIETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY + I + + + L + +PI FF++V VN D+ ++R NRL+ Sbjct: 661 EKQLYQATLETEKKIADHIHITELSSALNSLALLKKPINAFFEKVFVNDDNIDIRANRLA 720 Query: 684 LLQYIKNIILIVINVQKI 701 LL I+ + V + K+ Sbjct: 721 LLNRIRIVTQNVGDFSKL 738 >gi|254491151|ref|ZP_05104332.1| glycyl-tRNA synthetase, beta subunit [Methylophaga thiooxidans DMS010] gi|224463664|gb|EEF79932.1| glycyl-tRNA synthetase, beta subunit [Methylophaga thiooxydans DMS010] Length = 692 Score = 655 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 229/727 (31%), Positives = 356/727 (48%), Gaps = 63/727 (8%) Query: 1 MP---DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M D L+E+ +EE+P + ++ + K+ + +R Y TP RL L + Sbjct: 1 MSNTNDLLIELGTEELPPKALATLSKAFHQGVEQGFKKAELQCDEIRPYATPRRLALVIT 60 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 L ++ ER GP V G KA+ GF +S G+ +K D KG + Sbjct: 61 KLQTRQQDRTIERRGPAVTSAFDEDGNPTKALMGFAKSCGVDVDDLETMKTD--KGAWLV 118 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 ++ +L I+ A+ ++P PK MRW ++RP+ ++ + Sbjct: 119 FKQQQEGADTASLLPDIIQQALNELPIPKRMRWGDL-----PGEFVRPVHWLVVLF---- 169 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAIL 229 + ++ +DL + G ++ GHRFH P PI++ S Y LE E VL+D + R+ I Sbjct: 170 -GDDVVPVDLLGVSAGRMSRGHRFHNPQPIEIGSAMTYAPQLESEGHVLVDYDARKQIIN 228 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + LA +G E V + DLLEE+ GLVEW G+FD+++L LP E + +++ +QK Sbjct: 229 TQVNELAEKLGGEAVINPDLLEEVTGLVEWPVALAGNFDERFLELPAEALISSMEGHQKY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F R + L FI VSNI + D A +V GN RV+ RL DA FW D+ Sbjct: 289 FAVRAKNSDLLPHFITVSNIASQD-PAQVVAGNERVILPRLSDAAFFWDTDR-------- 339 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL R +L +VF K+GT ++ R+ L +IAQ I D A Sbjct: 340 ------------KQPLAARQEQLK--SIVFQNKLGTVYDKSQRVAKLAAEIAQHIRGDEA 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 L +RA +L+K DL TE+V EFP+LQG +G+ YA L EN +A++E PR + +P Sbjct: 386 LAERAAMLAKCDLVTEMVGEFPDLQGIMGRYYARLDGENNDVAEALDEQYLPRFAGDQLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 VSLA+KLDTL + I + P+G KDP+ALRRA LG++RII+EN++D+ L+ + Sbjct: 446 VTPTGQAVSLAEKLDTLTGLFGIGQPPTGVKDPFALRRAALGVLRIIIENELDLDLASLV 505 Query: 530 ED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + ++ +F+DRL+ Y D+ + D EA+L + L + + Sbjct: 506 DFAADTCGDTLTEKSVTSQVMQYFYDRLRGYALDQGFKADEFEAVLAVKPSRPLDFMQRL 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K + F + + KRI IL E + + I L AEK L ++ Sbjct: 566 KAVAAFRQLEQADSLAAGNKRIGNILRKNEAEAE--GMTIDDALLQESAEKDLAEKLAQA 623 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + Y + + L + E I+ FFDQV+V DD VR NRL++L + + L Sbjct: 624 SQDLAPLSAKSDYAGVLNYLAGMRETIDAFFDQVMVMADDEAVRQNRLAILNQTRALFLG 683 Query: 695 VINVQKI 701 V ++ + Sbjct: 684 VADISCL 690 >gi|220936411|ref|YP_002515310.1| Glycine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7] gi|219997721|gb|ACL74323.1| Glycine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7] Length = 696 Score = 654 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 216/724 (29%), Positives = 350/724 (48%), Gaps = 62/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D L+EI +EE+P + + + + L E G+ ++ + P RL L + ++ Sbjct: 5 HDLLIEIGTEELPPKALKGLRDAFAESVAAGLAEAGIGASKVQAFAAPRRLALLCRDVAA 64 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ ER GP + G KA GF S G++ +++ D KG + Sbjct: 65 RQPDQSMERRGPALAAAFDDNGNPTKAAQGFAASCGVKPEDLERLETD--KGAWLVHRHV 122 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++ +IV A+ +P PK MRW + + ++RP+ ++ +L + Sbjct: 123 EPGKAAAALIPSIVERALAALPIPKRMRWGDSDA-----EFVRPVHWVVLLL-----GDA 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAH 233 +++ ++ + G T GHRFH P + + Y L+ V+ D E RR AIL Sbjct: 173 VVEAEILGVKAGRETRGHRFHHPDTLFIAEPAAYAPLLQTEGRVMADFEARREAILGQVE 232 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + + DLL+E+ LVEW G F+ ++L +P+E + T++ NQK F Sbjct: 233 DAAQKLGGRALIEPDLLDEVTALVEWPSAIAGHFETRFLDVPQEALITTMQDNQKYFPVV 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI VSNI++ + + +GN RV+ R DA FW +D+ Sbjct: 293 DQVGRLMPHFITVSNIESRE-PERVREGNERVIRPRFSDAEFFWNQDR------------ 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 KPLD + L VVF K+GT E+ R+ L K +A L++ D R Sbjct: 340 --------KKPLDSHLEALK--HVVFQRKLGTLFEKTERVAALTKHLAGLLNVDHGEALR 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF ELQG +G+ YA E A+EE PR +N+P + Sbjct: 390 AAMLSKCDLQTHMVFEFTELQGTMGRYYAEHGGEPADVAQALEEQYWPRHAGDNLPETGV 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI---- 529 ++LAD+LDTL+ +AI +KP+G+KDPY LRRA LG++RI++E ++D+ L I Sbjct: 450 GKALALADRLDTLVGIFAIGQKPTGAKDPYGLRRAALGVLRILIERELDLDLLALIRAAA 509 Query: 530 ------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ + +RL+ Y DR I D+ EA+L L ++ + Sbjct: 510 EGYQGTDVNAAGAVASVFDYMMERLRAYYTDRGIGVDVFEAVLACRPLRPLDFDRRVRGV 569 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + F S + + + KRI IL K + +I P +AE+ L+ + Sbjct: 570 DHFRSLPEAQSLAAAHKRIHNILK---KVEGALPEQIDPARFSEDAERALFDRLEALRGT 626 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 RY + L ++ EP++ FFD V+V DD VRDNRL+LL + + L V + Sbjct: 627 ALPLFTEGRYTEGLAALAALREPVDRFFDGVMVMADDAAVRDNRLALLNSLSGLFLEVAD 686 Query: 698 VQKI 701 + ++ Sbjct: 687 MSRL 690 >gi|170740976|ref|YP_001769631.1| glycyl-tRNA synthetase subunit beta [Methylobacterium sp. 4-46] gi|238688003|sp|B0UNU2|SYGB_METS4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|168195250|gb|ACA17197.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium sp. 4-46] Length = 704 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 310/724 (42%), Positives = 422/724 (58%), Gaps = 45/724 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRRAAEDLRKLVTDALVERGFLYEGAKAFSTPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVGA + A+ GFL+S GL ++ ++ DPKKG+ Y+AV+ +P R Sbjct: 61 VRGQDVREERKGPRVGAPEAAVQGFLKSAGLASLDQARVVADPKKGEFYVAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + A W+RPL +I+ E + + + Sbjct: 121 LDVLAEILPAIIRAFPWPKSMRWGAASAEPGALRWVRPLHAIVATFGPETETPERVPFRV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF +P PI+V+ Y+ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DGIEAGFTTYGHRFLSPGPIEVRRFADYLPALERAKVVLDADRRKDIILHDARDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR----- 295 L+LVED+ LLEE+ GLVEW MG+FD +L +P E+IR TI+ NQKCFV R Sbjct: 241 LDLVEDEGLLEEVAGLVEWPVTLMGAFDASFLDIPPEVIRATIRANQKCFVLRAPAADPA 300 Query: 296 ---EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 LAN FILVSN+ ASDGGAAIV GN RVV ARL DA FW+ D+ Sbjct: 301 AKGRERLANAFILVSNLAASDGGAAIVAGNERVVRARLSDAKFFWETDR----------- 349 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 PL +R+ +LD D+VFH K+GTQ RV RI L + A ++ AD A + Sbjct: 350 ---------KIPLAERLPKLD--DIVFHEKLGTQAARVGRIAALARAFAPVVGADPAEAE 398 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L+KADL TE+V EFPELQG +G+ YA LQ E + AIEEH KP GP + VPT Sbjct: 399 RAARLAKADLVTEMVGEFPELQGLMGRYYAELQGEPEAVAAAIEEHYKPLGPGDRVPTGP 458 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK------------ 520 +S+ V+LADKLDTL+ FW+++EKP+GSKDPYALRRA LG+IR++L Sbjct: 459 VSVAVALADKLDTLVGFWSVDEKPTGSKDPYALRRAALGVIRLVLGAGARLPLLPALAAA 518 Query: 521 -IDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLN 578 + +L+ FF DRLK++L D+ RHDLI+A+ P D+LL +V ++ L Sbjct: 519 AGGHGAAPGGFAADLLGFFADRLKVHLRDQGARHDLIDAVFALPGQDDLLLVVRRVEALG 578 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTH 637 + G L +R IL IEEKK+ P L E L ++ Sbjct: 579 RLLDTEDGTNLLAGYRRAANILRIEEKKDGRAHDGAPDPARFALPEETALAEALAAARGA 638 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + ++ + + L + P++ FFD+V VN +D +R+NRL+LL ++ L V + Sbjct: 639 AERAVAAEDFEGAMRALAGLRAPVDAFFDKVTVNAEDPAMRENRLALLGALRTATLAVAD 698 Query: 698 VQKI 701 +I Sbjct: 699 FSRI 702 >gi|288959118|ref|YP_003449459.1| glycyl-tRNA synthetase beta chain [Azospirillum sp. B510] gi|288911426|dbj|BAI72915.1| glycyl-tRNA synthetase beta chain [Azospirillum sp. B510] Length = 729 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 277/748 (37%), Positives = 405/748 (54%), Gaps = 77/748 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E++SEEIPARMQ KAA D +++ L G+ +Q + TP R+ L + GL Sbjct: 8 ELLVEVFSEEIPARMQAKAALDFRRLIVEKLAAAGLGFQAAVEQSTPRRIALVVNGLPDR 67 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + + EE+ GPRVG+ ++A+ GFL+S GL ++ C+ ++D KG Y AV K R + Sbjct: 68 TEDIKEEKKGPRVGSPEQAVAGFLKSAGLDSLDQCE-QRDTGKGVFYFAVTEKKGRETAE 126 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA-KEKIIDLDLK 181 VL I+P A+ ++PWPKSMRW W+RPL SI+ + I Sbjct: 127 VLAEIIPAAMAELPWPKSMRWG-----TGTARWVRPLHSIIALFGGRVLDGGYDIGGAQG 181 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 I G+ T GHRF AP V+S Y L A V+LD E R+ I DA LA++ GL Sbjct: 182 RIAFGDSTRGHRFLAPDAFTVESFADYREKLLAAKVVLDREERKAKIKADAEALAASQGL 241 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 L D LLEE+ GLVEW V MGS D+ ++ +P E++ +++T+QK F EG +A Sbjct: 242 TLSPDDALLEEVAGLVEWPVVLMGSIDESFMDVPSEVLITSMRTHQKYFAVLDAEGRMAP 301 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 CFI+V+N + DGG A+V GN RV+ ARL DA FW +D Sbjct: 302 CFIVVANTETLDGGKAVVAGNERVLRARLSDAKFFWDQDH-------------------- 341 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 L+ R + L+ + FHA +GT E+V+RI++L +IA++I ADV +RA L KAD Sbjct: 342 KTKLEDRKSSLE--KITFHANLGTVAEKVTRIQLLAAEIARIIGADVKAANRAAELCKAD 399 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L TE+V EFPE+QG +G+ YA Q E+ DAI +H KP GP ++ PT +S+ V+LAD Sbjct: 400 LVTEVVGEFPEVQGIMGRYYAKDQGESDDVADAIADHYKPVGPSDSCPTVPVSVAVALAD 459 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------------- 528 K+DTL+ F+AI+EKP+GSKDPYALRRA LG+IR+IL N + + L+ Sbjct: 460 KIDTLVGFFAIDEKPTGSKDPYALRRAALGVIRLILTNDLRLRLTDITGFAFNSHYAQGR 519 Query: 529 ---------------------------------IEDQNLILFFHDRLKLYLHDRDIRHDL 555 L+ FF DRLK+ L ++ +RHDL Sbjct: 520 IIEHEPEATGSKSLQKFGKALESIPSRREVWSDWTTDGLMSFFADRLKVVLREQGVRHDL 579 Query: 556 IEAILRPEN-DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLE 613 ++A+ D+L+ ++ +K L F S +G L + KR I+ IEEKK+ Sbjct: 580 VDAVFALGGEDDLVRLLARVKALQAFVGSEEGANLLAAYKRASNIVRIEEKKDGISFDQP 639 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 + L + E L A ++ + +D + + L ++ P++ FFD+V VN + Sbjct: 640 VDAARLAQDEETALSAALNGASATAKPLLDAEDFTGTMAALANLRGPVDAFFDKVTVNAE 699 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKI 701 D+++R NRL LL I+ + V + KI Sbjct: 700 DKDLRANRLRLLTQIRTTLNAVADFSKI 727 >gi|126725590|ref|ZP_01741432.1| glycyl-tRNA synthetase beta subunit [Rhodobacterales bacterium HTCC2150] gi|126704794|gb|EBA03885.1| glycyl-tRNA synthetase beta subunit [Rhodobacterales bacterium HTCC2150] Length = 685 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 272/710 (38%), Positives = 388/710 (54%), Gaps = 36/710 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA DL ++ L + G+ Y + + TP RL L ++GL Sbjct: 1 MPDLLLELFSEEIPARMQTRAANDLKKLVTDGLVKSGLTYASAEAFSTPRRLTLVVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GPRV A KAI+GFLR GL D +D KKG VY A + K R Sbjct: 61 AESPMIVEERKGPRVDAPAKAIEGFLRGAGLT--RDQLDVRDEKKGQVYFARIEKAGRAA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 + ++ I+ PWPK+MRW T W+RPL SILC+L E A +++ D+ Sbjct: 119 PIIAAEVITDTIRNFPWPKAMRWGTGE-----LRWVRPLHSILCVLSDE-AGSEVVPFDV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N T GHRF V D Y L + V+L R + I DA A A G Sbjct: 173 DGIAANNTTEGHRFMGTGRFSVTDFDDYATKLRQNHVILRATDRADHIWADATNQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V+DK LL E+ GLVEW V MG+ D +L LP E+++ ++K +QK F + + Sbjct: 233 LEVVDDKGLLTEVAGLVEWPVVLMGAIDDDFLDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N D GA I+ GN +V++ARL DA FW+ D Sbjct: 293 EKFITVANRDTKDNGATILAGNQKVLSARLADAKFFWENDLRVA---------------- 336 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + + L+ +V FH K+GTQ R+ RI L ++IA ++ AD + + A ++KA Sbjct: 337 -KSDIGSWVKSLE--NVTFHNKLGTQSARIDRIATLAREIAPMVGADAEVAENAARVAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA + + +EH P GP ++VP+N +S+ V+LA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYATAAGMSDDIALSAQEHYSPLGPSDDVPSNPVSVAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------QN 533 DK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR+ L+N + + L ++ Sbjct: 454 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLTLDNDLSMNLKSVFARGYENANAED 513 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ FFHDRLK YL D+ IRHD+I+A L ND+L +V L + + GE L Sbjct: 514 LLSFFHDRLKTYLRDQGIRHDVIDACLAMANNDDLSLLVKRATALADLLKTDDGENLLQG 573 Query: 593 AKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR IL E K+ ++ +AEK L+A + I+ ++ + Sbjct: 574 YKRANNILTQAETKDGVSYEYGADIKFAEDDAEKALFAALDTADAAIKPALVADDFAAAM 633 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ PI+ FF+ V VN D+ VR NRL+LL I+ I ++ ++ Sbjct: 634 SAMAALRAPIDGFFEAVQVNSDNEIVRRNRLNLLHRIRAICTSTADLSRV 683 >gi|146339077|ref|YP_001204125.1| glycyl-tRNA synthetase subunit beta [Bradyrhizobium sp. ORS278] gi|146191883|emb|CAL75888.1| glycine tRNA synthetase, beta subunit [Bradyrhizobium sp. ORS278] Length = 772 Score = 650 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 311/792 (39%), Positives = 429/792 (54%), Gaps = 113/792 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVG AI GFL++TGL ++ + I++DPKKGD Y+A++ KP R Sbjct: 61 ARQADLKEERKGPRVGGPDAAIQGFLKATGLASLEEATIQRDPKKGDFYVALIEKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL ++PV ++ PWPKSMRW A SW+RPL +I E + +I + Sbjct: 121 LDVLAEMLPVIVRTFPWPKSMRWGQRSEKPGALSWVRPLHAITATFGLETEEPDVISFAV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP V+ + Y L +A V+LDP+ R++ I+ DA +LA A G Sbjct: 181 DGIEAGQTTYGHRFLAPSAFTVRRFEDYEAKLLDAKVVLDPQRRKDTIVTDAKQLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 ELVED LL+E+ GLVEW V MGSFD +YL +P E+IR TI+ NQKCFV R + G L Sbjct: 241 YELVEDPVLLDEVAGLVEWPVVLMGSFDPEYLKVPGEVIRATIRNNQKCFVVRDPKTGGL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FIL +NI+A+DGG I+ GN RV+ ARL DA F++ D Sbjct: 301 APKFILTANIEATDGGKTIIAGNERVIRARLSDAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + + +VFH K+GTQ R++RI L +IA ++ AD A RA L+K Sbjct: 342 -LKTKLEDRLPKFEQ--IVFHEKLGTQAARIARIEKLAAEIAPMVGADAAKTARAAKLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPE+QG +GK YA+ Q E+ S A EEH KP+GP + VP + +S+ V+L Sbjct: 399 ADLLTEVVGEFPEVQGLMGKYYALAQGEDASVAAACEEHYKPQGPGDRVPADPVSVAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI---------- 529 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRIILEN + + L+ Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIILENDLRVHLADICGPAFFDLATA 518 Query: 530 ----------------------------------------EDQNLILFFHDRLKLYLHDR 549 + +LI FF DRLK+ L ++ Sbjct: 519 IRAREVGNEVEQAESGEKPGLTRFVVRVDAQTFGTRSVPVKVVDLISFFADRLKVQLREQ 578 Query: 550 DIRHDLIEAILRPEN---------------------------------------DNLLTI 570 RHDL++A+ D+LL + Sbjct: 579 GARHDLVDAVFATSPSPWWRSDAARSGAGRLDLIEAAGSEEALDREPSQEEEMKDDLLMV 638 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYA 629 V ++ L +F S G+ L KR ILAIEEKK++ + L+ EK L Sbjct: 639 VRRVEALGKFLDSDDGKNLLAGTKRASNILAIEEKKDKRKFDGAPDAALYKLDEEKALAR 698 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I + G ++ + + + + ++ FFD+V VN DD +R+NRL LL I+ Sbjct: 699 AIGEVGAEAGAAVAKEDFAAAMRAMAKLRPAVDAFFDKVKVNDDDAAIRENRLKLLNEIR 758 Query: 690 NIILIVINVQKI 701 + V + KI Sbjct: 759 SATRAVADFSKI 770 >gi|154247257|ref|YP_001418215.1| glycyl-tRNA synthetase, beta subunit [Xanthobacter autotrophicus Py2] gi|154161342|gb|ABS68558.1| glycyl-tRNA synthetase, beta subunit [Xanthobacter autotrophicus Py2] Length = 733 Score = 650 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 299/758 (39%), Positives = 421/758 (55%), Gaps = 84/758 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+ L ++ L E G++Y+ + + TP RL L + GL Sbjct: 1 MPDLLIELFSEEIPARMQAQAADGLKKLVTDALVERGLLYEGAKAFVTPRRLALAVHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EE+ GPRVGA AI GFL+S GL ++ ++ DPKKGD Y+AV+ KP R Sbjct: 61 GRQADQREEKKGPRVGAPDGAIAGFLKSAGLSSLDQATVQSDPKKGDFYVAVVEKPGRPT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ I+P I+ PWPKSMRW + + W+RPL SI+ AE + +++ ++ Sbjct: 121 PEVIAEIIPAIIRSFPWPKSMRWGS-----GSLRWVRPLHSIVATFGAEGDEPEVVRFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRF AP PI V+ LD ++ LE A V++D + R++ IL DA A A Sbjct: 176 DGIVSSNITYGHRFLAPAPITVKRLDDWMAKLEAAKVVVDRDRRKDIILADAKNEAFANR 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LL+E+ GLVEW V MG+F++++L +P+E+IR TI+ NQKCFV + G L Sbjct: 236 LELVEDEGLLDEVAGLVEWPVVLMGAFEERFLDIPDEVIRATIRANQKCFVLKDPATGRL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+L+SN+ ASDGGAAIV GN RV+ ARL DA FW D+ N Sbjct: 296 ANRFLLISNLVASDGGAAIVAGNERVIRARLSDAKFFWDTDRVNG--------------- 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L+ RM R + FH K+G+Q ER+ RIR L +IA + A AL + A + K Sbjct: 341 -----LESRMPR--FQSITFHEKLGSQAERIERIRRLAVEIAPKVGAPAALAEDAALFCK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G YA + A EEH KP+GP + VPT +S+ V+L Sbjct: 394 ADLLTEVVGEFPELQGLMGHYYAQGEGLAPEVAAACEEHYKPQGPGDRVPTAPVSVAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------- 532 ADK+DTL+ FWAI+EKP+GSKDPYALRRA LG+IRI+LEN + + L+ Sbjct: 454 ADKIDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIVLENGLRLRLADVFTGHFKLADQD 513 Query: 533 ---------------------------NLILF----FHDR----------------LKLY 545 ++ ++ F DR LK++ Sbjct: 514 IIRTANEARIKRVEDALGDQGGAVVGNDVAMWVSRKFGDRTADSRSIDLLSFFADRLKVH 573 Query: 546 LHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE 604 L + RHDL++A+ D+L +V+ + L F + G L +R IL IEE Sbjct: 574 LREHGARHDLVDAVFALEGQDDLFLLVERMTALARFLDTEDGRTLLAGYRRAVNILRIEE 633 Query: 605 KKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 KK+ + L AE+RL I + ++ + + L + P++ Sbjct: 634 KKDGRAFAGPTDATLLKEPAEERLADAIEQVKGRVAAAVAAEDFETAMTALADLRGPVDA 693 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD V VN D +R+NRL LL I+ + + +I Sbjct: 694 FFDAVTVNDQDPALRENRLKLLDEIRAATRGIADFDRI 731 >gi|307941588|ref|ZP_07656943.1| glycyl-tRNA synthetase, beta subunit [Roseibium sp. TrichSKD4] gi|307775196|gb|EFO34402.1| glycyl-tRNA synthetase, beta subunit [Roseibium sp. TrichSKD4] Length = 697 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 307/722 (42%), Positives = 432/722 (59%), Gaps = 48/722 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE +SEEIPARMQ +AAEDL ++ L + G+ Y+ + Y+TP RL L++ G+ Sbjct: 1 MPDLLLEFFSEEIPARMQRRAAEDLKSLVTNALVDAGLPYEGAKAYFTPRRLALHVAGVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA +KA++GFLR GL +I + ++ DPKKGD Y+AV+ KP R Sbjct: 61 AGSAATREERKGPRVGAPEKAVEGFLRGAGLSSIDEVSVQTDPKKGDFYVAVIEKPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +D++ +P ++ PWPKSM+W + + W+RPL SI+ E + +II+ ++ Sbjct: 121 KDIIAGFMPGIVRNFPWPKSMKWGS-----GSMRWVRPLHSIIATFGPETEEPEIIEFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF + V+ +D Y LE+ V+LD + R++ ILNDA A A+G Sbjct: 176 DGITSGNTTRGHRFLGDEVLTVRRMDDYAAQLEKHKVVLDADRRKDIILNDAKDRALALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 LELVED LLEE+ GLVEW V GSFD+K+L +P+E RLTI+ NQKCFV + + G L Sbjct: 236 LELVEDLGLLEEVAGLVEWPVVLTGSFDEKFLEIPDECTRLTIRVNQKCFVMKDPKTGKL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FILVSNI + D G IV GN +V+ ARL DA FW+ D Sbjct: 296 AKKFILVSNITSPDDGKLIVAGNEKVIRARLSDAWFFWETD------------------- 336 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L + +LD +VFH K+GTQGERV R+ L ++A ++ AD RA L+K Sbjct: 337 -LKTQLADNLPKLD--SIVFHEKLGTQGERVKRLEALASELAPIVGADKDKAVRAARLAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL +++V EFPELQG +G+ YA Q E+ S AIE+H +P+GP ++VPT+ +++ V+L Sbjct: 394 ADLVSQMVYEFPELQGLMGRTYASKQGEDESVAIAIEDHYRPQGPSDSVPTDPVAVAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLD L FWAI+EKP+GSKDP+ALRRA LG+IRI+LENK+ +PL+Q ++ Sbjct: 454 ADKLDLLAGFWAIDEKPTGSKDPFALRRAALGVIRIVLENKLRLPLAQQLKASLYKIKPD 513 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEF 580 +L+ FF DRLK++L D RHDLI+A+ D+LL +V ++ L F Sbjct: 514 LNNEAAEELVTDLLSFFADRLKVHLKDEGARHDLIDAVFALGGQDDLLMVVKRVEALGAF 573 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 SS G KR IL EEKK+ + L +AE L A I + Sbjct: 574 VSSYDGANLAAGYKRAVNILRAEEKKDGAPVEGRPHADLLQEQAEIDLAAAIDTARAAAE 633 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ ++ + + L + P++ FF+ +LVN DD +R NRL LL I++ +V + Sbjct: 634 NAVANEDFEEAMAALSKLRAPVDKFFEDILVNADDPALRKNRLQLLAEIRDATHVVADFS 693 Query: 700 KI 701 K+ Sbjct: 694 KV 695 >gi|119383292|ref|YP_914348.1| glycine--tRNA ligase [Paracoccus denitrificans PD1222] gi|229558567|sp|A1AZF8|SYGB_PARDP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|119373059|gb|ABL68652.1| glycyl-tRNA synthetase beta chain [Paracoccus denitrificans PD1222] Length = 685 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 271/710 (38%), Positives = 407/710 (57%), Gaps = 36/710 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A DL ++ L E G+ Y++ + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQARARGDLKKLVTDGLVEAGLTYKSAGAFSTPRRLALAIEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPR A + A++GFLRSTGL +D KKG V+ AV+ KP R Sbjct: 61 AQSPTTREERKGPRTDAPEAALEGFLRSTGLTREQLE--ARDDKKGQVWFAVVTKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ AI+ PWPKSMRW + + W+RPL SI+C+L E ++ L++ Sbjct: 119 AEIVAEVLERAIRDFPWPKSMRWGSG-----SLRWVRPLHSIICLLSDES-GASVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I GN T GHRF AP I V + Y L A V+LD R AI +A LA A G Sbjct: 173 EGIGAGNTTRGHRFMAPDEIAVSGFEDYAAKLRRARVMLDAAEREAAIRQEAANLAFARG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 E+V D+ LL E+ GLVEW MG+ + ++L LP E+++ ++K +QK F R + Sbjct: 233 WEIVPDEGLLSEVAGLVEWPVPLMGAIEDRFLALPPEVLQTSMKEHQKFFSARNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+NI+ D G I++GN RV+AARL DA FW+ D + Sbjct: 293 EGFVTVANIETPDHGETILKGNQRVLAARLSDAAFFWENDLR-----------------E 335 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + L V F +K+G+Q +R++RI L +IA L+ AD ++A ++K Sbjct: 336 AKAGMADWAEGLR--SVTFQSKLGSQADRIARIAALALEIAPLVGADADQAEQAARIAKL 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G+ YA+ DA +H P GP + VP+ +S+ V+LA Sbjct: 394 DLRSAMVGEFPELQGIMGRYYALEAGLPEPVADAARDHYSPLGPSDAVPSAPVSVAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------EDQN 533 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + L Q + + Sbjct: 454 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLLLVNGVRANLGQTFAKARPDADAAD 513 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ FFHDRLK++L D+ +RHD+I+A+L P ND+L+ +V+ L++ + G L Sbjct: 514 LLAFFHDRLKVHLRDQGVRHDIIDAVLSMPGNDDLVLLVNRATALSDVLKTEDGTNLLQG 573 Query: 593 AKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR ILA E+ + E S P++ + E+ L+A + I+E++ + + Sbjct: 574 LKRAGNILAQAEEMDGVEYSFGADPKFAETDEERTLFAALDKAEPAIREAVRLEDFQAAT 633 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + S+ PI+ FF+ V +N D++ +R NRL+LL I++ ++ + +I Sbjct: 634 QGIASLRAPIDAFFEAVQINSDNQILRRNRLNLLSRIRDAGRLIADFGRI 683 >gi|319404561|emb|CBI78167.1| glycyl-tRNA synthetase beta chain [Bartonella rochalimae ATCC BAA-1498] Length = 742 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 343/738 (46%), Positives = 455/738 (61%), Gaps = 37/738 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPA+MQHKAA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MPDLLLELFSEEIPAQMQHKAASDLKKCVTDKLINAGLTYKAACEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GP V + ++ ID FLR+TGL IS I D KKG+ Y+A K RL Sbjct: 61 KSSPDVHEERKGPNVQSPQQVIDAFLRATGLNDISKVHIAHDDKKGNFYIAKTTKKGRLA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I PWPKSMRW + + WIR L++ILC+L + + KII + Sbjct: 121 EEIIADILPDIIYNFPWPKSMRWGQESAKNGSLRWIRSLQNILCVLGSAIGETKIIPFTV 180 Query: 181 KEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + PI+V+ D Y+ LE V+LD E R++ IL D L A Sbjct: 181 GSLKSNNLTYGHRFLSNGKPIQVRRFDDYVSQLENHKVILDAERRKDIILADIQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT--REG 297 GLELVEDK LLEE+ GLVEW V MG+FDK +L +P E+IRLTI+T+QKCFVTR + Sbjct: 241 GLELVEDKALLEEVSGLVEWPVVLMGTFDKTFLSIPPEIIRLTIQTHQKCFVTRKRGEKS 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILV+NI ASD G I +GNS+VV ARL DAL+FW+ DQ NLPN L+ SA K Sbjct: 301 KLSNYFILVANILASDKGIEISKGNSKVVHARLSDALYFWETDQCNLPNTIHLESSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A LD L+V FHAK+GTQG R+ RI L + IA L+ AD L RA VL Sbjct: 361 DLDLNKPLDQRVAHLDYLNVTFHAKLGTQGARIERIAALTQIIAPLVQADSILAKRAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEI+ EFPELQG IG++YA+LQ EN +AIE+H KP GP + +PT I++TV Sbjct: 421 AKADLQTEIIGEFPELQGLIGRKYALLQGENPLVAEAIEDHYKPLGPKDRIPTESIAVTV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----- 532 +LADK+DTLI FW INEK + SKDPYALRRA LG+I+++L N + I L Sbjct: 481 ALADKIDTLIGFWFINEKATSSKDPYALRRAALGVIKLMLSNDLKIRLIPLFYQAMNFLL 540 Query: 533 -----------------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +L+ FFH+RLK YL D RHD+IEA+L + Sbjct: 541 QQRVKYATSETESAHLQNMPVEKKENIVLDLLAFFHERLKGYLKDEGARHDIIEAVLTKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D++L I ++ L F +S G+ L++ KR IL E KK I +I P+ + Sbjct: 601 ADDILLITRRVEALTFFINSNDGDSLLIAIKRAINILENETKKGTIIINKIKPELFIETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY + + I + + L + +PI FF++V VN D+ +R NRL+ Sbjct: 661 EKQLYQAMLETEKKIANHIHITELSSALNSLALLKKPINAFFEKVFVNDDNINIRANRLA 720 Query: 684 LLQYIKNIILIVINVQKI 701 LL I+ + V + K+ Sbjct: 721 LLDRIRIVTQNVGDFSKL 738 >gi|319775140|ref|YP_004137628.1| glycine tRNA synthetase subunit beta [Haemophilus influenzae F3047] gi|329122944|ref|ZP_08251515.1| glycyl-tRNA synthetase beta subunit [Haemophilus aegyptius ATCC 11116] gi|317449731|emb|CBY85938.1| glycine tRNA synthetase, beta subunit [Haemophilus influenzae F3047] gi|327471875|gb|EGF17315.1| glycyl-tRNA synthetase beta subunit [Haemophilus aegyptius ATCC 11116] Length = 688 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 346/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++ +L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEEHFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIEVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + + +AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTV----CVEQAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|239831279|ref|ZP_04679608.1| glycyl-tRNA synthetase, beta subunit [Ochrobactrum intermedium LMG 3301] gi|239823546|gb|EEQ95114.1| glycyl-tRNA synthetase, beta subunit [Ochrobactrum intermedium LMG 3301] Length = 765 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 335/762 (43%), Positives = 443/762 (58%), Gaps = 61/762 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L E G+ Y+ YWTP RL L ++GL+ Sbjct: 2 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVEAGLTYEAATAYWTPRRLALDIRGLT 61 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 62 VRSKDVHEDIKGPSVTAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 121 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ +VP I+ PWPKSMRW + + W+RPL+SILC E + +ID D+ Sbjct: 122 EEIVAELVPHTIRNFPWPKSMRWGAASAKPGSLRWVRPLQSILCTFGPETEETVVIDFDV 181 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 182 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 241 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELVED+ LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 242 GLELVEDEGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGETE 301 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILVSNI A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF Sbjct: 302 ALSNKFILVSNIAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAQKF 361 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL Sbjct: 362 GLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVSADPKLATRAAVL 421 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TE+V EFPELQG +G++YA+LQ E + AIEEH KP+GP + VP N +S+ V Sbjct: 422 AKADLQTEVVGEFPELQGAMGRKYALLQGEGETVAAAIEEHYKPQGPSDVVPKNPVSVAV 481 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------- 529 +LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + PL Sbjct: 482 ALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALK 541 Query: 530 --EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND---------------NLLTIV- 571 + Q + F RL ++ L +LL+ + Sbjct: 542 EGQVQRKLREFEARLAAENSGDVDGEQDVDNALASYEKLARAEAEASSEPVLGDLLSFLH 601 Query: 572 -----------DLIKHLNEFF---------------------SSAKGEKFLLSAKRIFQI 599 ++ + G+ L KR I Sbjct: 602 DRFKVHLKDEGARYDAIDAVLSPEADNLLLVARRLEALIVFINEEDGKNLLAGTKRAANI 661 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK +++ + P L EK L+ +S + ++ + ++ L + Sbjct: 662 LAAEEKKGTKVADHVDPALLREAEEKALFEAVSLASKDAEAAIAREDFNGAMLALAKLRG 721 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF++VLVN +D VR NRL+LL I+ V + KI Sbjct: 722 PVDTFFEKVLVNDEDENVRANRLALLDQIRAATGKVADFSKI 763 >gi|99082150|ref|YP_614304.1| glycyl-tRNA synthetase subunit beta [Ruegeria sp. TM1040] gi|123252189|sp|Q1GE74|SYGB_SILST RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|99038430|gb|ABF65042.1| Glycine--tRNA ligase [Ruegeria sp. TM1040] Length = 687 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 279/710 (39%), Positives = 408/710 (57%), Gaps = 34/710 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ +A EDL + L E G+ Y TP RL L ++GL Sbjct: 1 MADLLIELFSEEIPARMQARAGEDLKKRMTDGLVEAGLTYAGAHALTTPRRLTLAIEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA +KAI+GFLR GL D ++D KG VY A + KP R Sbjct: 61 DHSPTVREERKGPKVGAPEKAIEGFLRGAGLT--RDQLEERDTPKGAVYFATIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW A W+RPL SILC+L E +++ L++ Sbjct: 119 AEIIAEVLEDTIRNFPWPKSMRWGAG-----ALRWVRPLHSILCLLTRE-EGSEVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G+ T GHRF AP V + Y L+ A V+LDP+ R AI DA A A G Sbjct: 173 DGVTSGDSTAGHRFMAPARFAVTGFEDYAAKLKRAFVVLDPKEREAAIWQDATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V+DK LL E+ GLVEW V MGS D ++L LP E+++ ++K +QK F + + Sbjct: 233 LEVVDDKGLLAEVAGLVEWPVVLMGSIDAEFLDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D + + Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFWENDLRIAKSEVGV---------- 342 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + + L +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 343 -----EGWLESLG--NVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAAKVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA +A E H P GP ++VPT +S+ V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAQAAGLPQEVANACELHYSPLGPSDDVPTEPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------EDQN 533 DK+DTL FWAI+EKP+GSKDPYALRRA LG+IR++L N + + L + + + Sbjct: 456 DKIDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLSNDVRVGLKEVFAKAYEGADGSD 515 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ FFHDRLK++L D+ IRHD+I+A + +D+L +V + L +F S GE L Sbjct: 516 LLSFFHDRLKVFLRDQGIRHDVIDACIAMEGSDDLTLLVKRARALEDFMKSEDGENLLQG 575 Query: 593 AKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR IL+ E+K+ E S +++ AE L+ ++ I +++ + + Sbjct: 576 FKRANNILSQAEEKDGVEYSFGADKKFVEDPAEAALFEALAANEAAISTAIEAEDFAAAM 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ P++ FF+ V VN D+ VR NRL+LL I+ + V ++ +I Sbjct: 636 GGMAALRAPVDAFFEAVQVNSDNPVVRRNRLNLLSQIRKVCGQVADLSRI 685 >gi|114797868|ref|YP_759414.1| glycyl-tRNA synthetase subunit beta [Hyphomonas neptunium ATCC 15444] gi|123028308|sp|Q0C4C9|SYGB_HYPNA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|114738042|gb|ABI76167.1| glycyl-tRNA synthetase, beta subunit [Hyphomonas neptunium ATCC 15444] Length = 706 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 284/736 (38%), Positives = 409/736 (55%), Gaps = 67/736 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ KA DL L G LKE G+ ++ P RL ++GL Sbjct: 1 MADLLIELFSEEIPARMQAKAEADLLAALTGKLKEAGLAWKTAFAVSGPRRLTAVVEGLD 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE+ GP+VGA ++AI GFLR GL IS+ + DPKKGD Y+A P R Sbjct: 61 ARSADVREEKKGPKVGAPEQAIAGFLRGAGLTDISEASVVSDPKKGDFYVAYSTVPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +DV+ VP I+ WPKSMRW T W+RPL+ I+C+L ++ ++ Sbjct: 121 KDVIAEAVPAIIRDFHWPKSMRWGTGE-----LRWVRPLQRIVCVL-----DGAVVPFEV 170 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAV 239 I GN T GHR H P V Y LE + V+L + RR AIL + + Sbjct: 171 GGITSGNETEGHRVHGRGPYTVTGWADYKSQLEGQGHVVLSRDDRRAAILGGIEKACAKA 230 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGV 298 GL+ +EDK LLEE+ GL EW V +G D +L LP E+I L+++T+QK F + G Sbjct: 231 GLQWIEDKGLLEEVTGLAEWPVVVLGQMDPDFLDLPPEVITLSMRTHQKYFAATHAKTGK 290 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FILV+NI A+DGGA I +GN+RV++ARL DA FW++D+ Sbjct: 291 LAPNFILVANIAATDGGAKIAEGNARVLSARLSDARFFWEKDK----------------- 333 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + PL+ +L + F ++G+ G++V R+ L +++A + AD L +RA L+ Sbjct: 334 ---ATPLEVMGEKLKT--IAFKEELGSLGDKVERVAALARELAPAVGADPGLAERAARLA 388 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EFPELQG +G+ YA+ E+ DAI +H KP+GP ++VPT+ +SI V+ Sbjct: 389 KADLVSEMVGEFPELQGVMGRYYALAVGEDARVADAIRDHYKPQGPSDSVPTDPVSIAVA 448 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------------ 526 LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG++RI LEN + + LS Sbjct: 449 LADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVVRINLENGVRLKLSNAILKAPLAVRP 508 Query: 527 ------------------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + D L+ FF DRLK L D+ RHDLI+A+ D+L+ Sbjct: 509 VVKGGQSDSVRSAASKAIDALIDPTLLSFFADRLKQVLRDQGKRHDLIDAVFALGEDDLV 568 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL-EISPQYLLL--EAEK 625 IV ++ L F ++ G L +R IL EEKK + P + AE+ Sbjct: 569 LIVKRVEALAAFLATEDGATLLAGYRRAANILKAEEKKGALPDGLSVDPALIAKGPAAEQ 628 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A +++ ++ + + + L + P++ FF+ VLVN D +VR+NRL+LL Sbjct: 629 ALWASLNETTAALEAPLKTEDFAGAMTALAGLRAPVDAFFEDVLVNDSDAKVRENRLALL 688 Query: 686 QYIKNIILIVINVQKI 701 ++ + V + +I Sbjct: 689 IAVRGALHKVADFSRI 704 >gi|16272861|ref|NP_439084.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae Rd KW20] gi|260580013|ref|ZP_05847843.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae RdAW] gi|1174512|sp|P43822|SYGB_HAEIN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|1573946|gb|AAC22584.1| glycyl-tRNA synthetase, beta chain (glyS) [Haemophilus influenzae Rd KW20] gi|260093297|gb|EEW77230.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae RdAW] Length = 688 Score = 645 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 342/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFYIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++ +L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEEHFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKAGAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|301154902|emb|CBW14365.1| glycine tRNA synthetase, beta subunit [Haemophilus parainfluenzae T3T1] Length = 688 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 210/722 (29%), Positives = 346/722 (47%), Gaps = 62/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVDQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNGIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALSEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAKGDYTAVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|325577405|ref|ZP_08147812.1| glycyl-tRNA synthetase beta subunit [Haemophilus parainfluenzae ATCC 33392] gi|325160634|gb|EGC72757.1| glycyl-tRNA synthetase beta subunit [Haemophilus parainfluenzae ATCC 33392] Length = 688 Score = 644 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 210/722 (29%), Positives = 347/722 (48%), Gaps = 62/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVDQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R++RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLSRLET--VLFQQQLGTLKDKTDRIEKLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFADKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAKGDYTAVLDKLANLRAPVDNFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|152972429|ref|YP_001337575.1| glycyl-tRNA synthetase subunit beta [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238897022|ref|YP_002921768.1| glycyl-tRNA synthetase subunit beta [Klebsiella pneumoniae NTUH-K2044] gi|262040630|ref|ZP_06013868.1| glycyl-tRNA synthetase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|166227916|sp|A6TFH4|SYGB_KLEP7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|150957278|gb|ABR79308.1| glycyl-tRNA synthetase beta subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549350|dbj|BAH65701.1| glycyl-tRNA synthetase beta subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041994|gb|EEW43027.1| glycyl-tRNA synthetase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 689 Score = 644 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 208/726 (28%), Positives = 339/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSENTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ ++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAAAQADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMIASSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + IP + GHRF + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAQEAARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +D+ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLDLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGEKLTNANVVDDVIDFMLGRFRAWYQDEGYGVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K + ++ + L AE +L + Sbjct: 566 AVSHFRTLEESSALAAANKRVSNILA---KSDETLNDIVHASVLKEAAEIKLAGNLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V Sbjct: 623 DKLQPYFAAGRYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|301169648|emb|CBW29249.1| glycine tRNA synthetase, beta subunit [Haemophilus influenzae 10810] Length = 688 Score = 644 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 346/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEMEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLEVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIEVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + + +AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTV----CVEQAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|190151158|ref|YP_001969683.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264507|ref|ZP_07546092.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692361|sp|B3GZ55|SYGB_ACTP7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|189916289|gb|ACE62541.1| Glycyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870204|gb|EFN01963.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 688 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 207/722 (28%), Positives = 345/722 (47%), Gaps = 62/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +RA Sbjct: 338 ------LKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVDDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + E++P + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKAD----VAIGEVNPTACVEPAEKALAEAVLGLRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L S+ +P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAKGEYTAVLDKLASLRQPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|148828101|ref|YP_001292854.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittGG] gi|166227915|sp|A5UI65|SYGB_HAEIG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|148719343|gb|ABR00471.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittGG] Length = 688 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 208/720 (28%), Positives = 345/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLAKQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L + V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLRDKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGRLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I D A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGTDEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIEVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + + +AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTV----CVEQAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|167854811|ref|ZP_02477589.1| glycyl-tRNA synthetase subunit beta [Haemophilus parasuis 29755] gi|167854109|gb|EDS25345.1| glycyl-tRNA synthetase subunit beta [Haemophilus parasuis 29755] Length = 689 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 209/722 (28%), Positives = 348/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEAELNQAGLSFDKVEWFAAPRRLAVKVLGLATS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ + G+ +I D KG+ + Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATD--KGEWLIHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ A+ K+P PK+MRW ++RP+ ++ +L +++ Sbjct: 123 EGQPTKNLLVGIISQALAKLPIPKTMRWGDKTE-----QFVRPVHTVTLLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF ++ D Y L+E V+ D R+ IL A Sbjct: 173 IEGEILGVASGTTVRGHRFLGEREFQISHADQYPALLKEKGSVVADFNERKALILAKAQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PSKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + LS + Sbjct: 450 SSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLSDLVATSAK 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNSNVVEEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISSEIDRTLLVEAEEKALAEQVITLQAELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y D L + E ++ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 627 PLFEKGEYQTALDRLAGLREVVDNFFDKVMVNAEDPKLRQNRQAILNNLRNLFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|206579067|ref|YP_002236067.1| glycyl-tRNA synthetase, beta subunit [Klebsiella pneumoniae 342] gi|238064853|sp|B5XMY7|SYGB_KLEP3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|206568125|gb|ACI09901.1| glycyl-tRNA synthetase, beta subunit [Klebsiella pneumoniae 342] Length = 689 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 207/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSENTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ ++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAAAQADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMIASSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + IP + GHRF + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLGVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGEKLTNANVVDDVIDFMLGRFRAWYQDEGYGVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K + ++ + L AE +L + Sbjct: 566 AVSHFRTLEESSALAAANKRVSNILA---KSDETLNDIVHASVLKEAAEIKLAGNLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V Sbjct: 623 DKLQPYFAAGRYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|156936270|ref|YP_001440187.1| glycyl-tRNA synthetase subunit beta [Cronobacter sakazakii ATCC BAA-894] gi|166227913|sp|A7MKS3|SYGB_ENTS8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|156534524|gb|ABU79350.1| hypothetical protein ESA_04169 [Cronobacter sakazakii ATCC BAA-894] Length = 689 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 337/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + + + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDAAGLAHGVVSWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 61 LAASQPDREVEKRGPAVSAAFDAEGNPSKAAEGWARGCGITVDQAERLVTD--KGEWLMY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAQALLPNMVSTALSKLPIPKLMRWGASD-----VQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 ++++ + I + GHRF + D Y + LE V+ D R+ I Sbjct: 169 DDEVLPATILGIQSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYNARKAKIQQ 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYGTDGKLLPNFIFVANIESKD-PRQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLET--VLFQQQLGTLRDKTDRIQALSGWIASQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVAVALNEQYMPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 SLVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +++ F R + + D D I+A+L +K Sbjct: 506 EAVRLYGSKLTNAKVVDDVVDFMLGRFRAWYQDEGYSVDTIQAVLANRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ E+ L + E RL ++ Sbjct: 566 AVSHFRTLDEAVALAAANKRVSNILA---KATEPLNDEVHASVLKEDPEIRLALQVAVMR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L + EP++ FF++V+VN DD +VR NRL+LL ++ + L V Sbjct: 623 DKLQPLFAEGRYQEALVELAQLREPVDEFFEKVMVNADDAQVRINRLTLLSKLRALFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|257465118|ref|ZP_05629489.1| glycyl-tRNA synthetase subunit beta [Actinobacillus minor 202] gi|257450778|gb|EEV24821.1| glycyl-tRNA synthetase subunit beta [Actinobacillus minor 202] Length = 689 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 209/722 (28%), Positives = 349/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEAELNQAGLSFDKVEWFAAPRRLAVKVLGLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ + G+ +I D KG+ + Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ A+ K+P PK+MRW ++RP+ ++ +L +++ Sbjct: 123 EGQPTKNLLVGIISQALAKLPIPKTMRWGDKTE-----QFVRPVHTVTLLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF ++ D Y L+E V+ D R+ IL A Sbjct: 173 IEGEILGVASGTTVRGHRFLGEREFQISHADQYPALLKEKGSVVADFNERKALILAKAQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D +AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PSAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLKT--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I ++P GS DP+ALRRA LG +RII+E + + LS + Sbjct: 450 SSVALADKFDTLTGIFGIGQQPKGSADPFALRRAALGALRIIVEKNLPLDLSDLVATSAK 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNSNVVEEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISSEIDRTLLVEAEEKALAEQVIALQAELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y D L + E ++ FFD+V+VN ++ ++R NR ++L ++N+ L V ++ Sbjct: 627 PLFEKGEYQTALDRLAGLREVVDNFFDKVMVNAEEPKLRQNRQAILNNLRNLFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|260599858|ref|YP_003212429.1| glycyl-tRNA synthetase subunit beta [Cronobacter turicensis z3032] gi|260219035|emb|CBA34390.1| Glycyl-tRNA synthetase beta subunit [Cronobacter turicensis z3032] Length = 689 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 207/726 (28%), Positives = 337/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + + + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDAAGLTHGVVSWFAAPRRLALKVAS 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 61 LAASQPDREVEKRGPAVSAAFDAEGNPSKAAEGWARGCGITVDQAERLVTD--KGEWLMY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAQALLPNMVSTALSKLPIPKLMRWGASD-----VQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 ++++ + I + GHRF + D Y + LE V+ D R+ I Sbjct: 169 DDEVLPATILGIQSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYNARKAKIQQ 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYGTDGKLLPNFIFVANIESRD-PHQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLET--VLFQQQLGTLRDKTDRIQALSGWIANQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVAVALNEQYMPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ V++ADK+DTL + I + P G KDP+ALRRA LG +RII+E + + L E Sbjct: 446 SLVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGALRIIVEKNLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +++ F R + + D D I+A+L +K Sbjct: 506 EAVRLYGSKLTNAKVVDDVVDFMLGRFRAWYQDEGYSVDTIQAVLANRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K N ++ E+ L + E RL ++ Sbjct: 566 AVSHFRTLDEAVALAAANKRVSNILA---KANEPLNDEVHASVLKEDPEIRLALQVAVMR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L + EP++ FF++V+VN DD +VR NRL+LL ++ + L V Sbjct: 623 DKLQPLFAEGRYQEALVELAQLREPVDEFFEKVMVNADDAQVRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|240948882|ref|ZP_04753238.1| glycyl-tRNA synthetase subunit beta [Actinobacillus minor NM305] gi|240296697|gb|EER47308.1| glycyl-tRNA synthetase subunit beta [Actinobacillus minor NM305] Length = 689 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 210/722 (29%), Positives = 348/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEAELNQAGLSFDKVEWFAAPRRLAVKVLGLATS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ + G+ +I D KG+ + Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L ++ A+ K+P PK+MRW ++RP+ ++ +L +++ Sbjct: 123 EGQPTKNLLVGMISNALAKLPIPKTMRWGDKTE-----QFVRPVHTVTLLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ I G GHRF ++ D Y L+E V+ D R+ IL A Sbjct: 173 IEGEILGIASGTTIRGHRFLGEREFQISHADQYPALLKEKGSVVADFNERKALILAKAQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KEGKLLPHFIFVSNINPED-PSKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + LS + Sbjct: 450 SSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLSDLVATSAK 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNSNVVEEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISSEIDRTLLVEAEEKALAEQVITLQAELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y D L + E ++ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 627 PLFEKGEYQTALDRLAGLREVVDNFFDKVMVNAEDPKLRQNRQAILNNLRNLFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|288933065|ref|YP_003437124.1| glycyl-tRNA synthetase subunit beta [Klebsiella variicola At-22] gi|288887794|gb|ADC56112.1| glycyl-tRNA synthetase, beta subunit [Klebsiella variicola At-22] Length = 689 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 207/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSENTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ ++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAAAQADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMIASSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + IP + GHRF + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGEKLTNANVVDDVIDFMLGRFRAWYQDEGYGVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K + ++ + L AE +L + Sbjct: 566 AVSHFRTLEESSALAAANKRVSNILA---KSDETLNDIVHASVLKEAAEIKLAGNLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V Sbjct: 623 DKLQPYFAAGRYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|255263205|ref|ZP_05342547.1| glycyl-tRNA synthetase, beta subunit [Thalassiobium sp. R2A62] gi|255105540|gb|EET48214.1| glycyl-tRNA synthetase, beta subunit [Thalassiobium sp. R2A62] Length = 699 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 281/724 (38%), Positives = 404/724 (55%), Gaps = 50/724 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ KAA+DL ++ L E G+ Y + + TP RL L ++GL+ Sbjct: 1 MSDLLIELFSEEIPARMQAKAADDLKRLVTNGLVEAGLTYASAGAFSTPRRLVLTVEGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KA++GFLRSTGL D ++D KKG V+ A++ KP R Sbjct: 61 DRSADVREERKGPRTDAPEKALEGFLRSTGLT--KDQLEERDDKKGAVWFAIVEKPGRAA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL SILCIL AED +++ LD+ Sbjct: 119 SEIVAEVLDATIRNFPWPKSMRWGN-----GSLRWVRPLHSILCILSAED-GAEVVPLDV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G++T+GHRF AP IKV + D L++A V+LD R AI DA A A G Sbjct: 173 DGIVSGDVTFGHRFLAPDAIKVVNFDDCSTKLKQAYVVLDASERAEAIWADATNQAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE++ED+ LL E+ GLVEW V MG K YL LP E+++L++K +QK F + + Sbjct: 233 LEVIEDRGLLAEVAGLVEWPVVLMGPIAKDYLNLPSEVLQLSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+NI+ +D GA I+ GN RV++ARL D FW+ D + A Sbjct: 293 EQFITVANIETADNGATILAGNGRVLSARLADGKFFWENDLREAKSGMKGWLQA------ 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+G+ E++ RI L +A AD + A LSKA Sbjct: 347 -------------LENVTFHNKLGSVAEQIERISDLSGHLAATTGADPVMATTAAQLSKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y+ + + AIEEH P GP ++VPT +S+ V+LA Sbjct: 394 DLSSEMVYEFPELQGVMGRYYSAEAGHDAAIGAAIEEHYSPLGPSDDVPTAPVSMAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 K+DTL FW I+EKP+GSKDP+ALRRA LG+IR+ +EN + L Q Sbjct: 454 AKVDTLAGFWVIDEKPTGSKDPFALRRAALGVIRLAVENDLRFGLRDVFARQATVVSKAQ 513 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIVDLIKHLN 578 +L+ F HDRLK+YL DR ++HD+I+A + P ND+L +V + L+ Sbjct: 514 DGSDGVDSDAISDSLMGFVHDRLKVYLKDRGVKHDVIDASVAMPGNDDLSLLVRRAEALS 573 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTH 637 F + GE + KR +L EEKK+ E S ++ + E+ L+A + Sbjct: 574 GFLRTDDGENLVQGFKRANNMLTAEEKKDGVEYSFGADIKFAETDEERALFAALDAGEPA 633 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 I +M + + + + P++ FF V VN D +R NRL+LL I L V + Sbjct: 634 IVAAMGAEDFETAMAAMAQLRGPVDAFFKAVKVNADSDVIRRNRLNLLSRISKTCLSVAD 693 Query: 698 VQKI 701 + ++ Sbjct: 694 LTRL 697 >gi|309751409|gb|ADO81393.1| Glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae R2866] Length = 688 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 211/720 (29%), Positives = 345/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLCEKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGRLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F K+GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQKLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRMPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|330002313|ref|ZP_08304293.1| glycine--tRNA ligase, beta subunit [Klebsiella sp. MS 92-3] gi|328537334|gb|EGF63585.1| glycine--tRNA ligase, beta subunit [Klebsiella sp. MS 92-3] Length = 689 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 207/726 (28%), Positives = 339/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSENTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ ++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAAAQADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMIASSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + IP + GHRF + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGEKLTNANVVDDVIDFMLGRFRAWYQDEGYGVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K + ++ + L AE +L + Sbjct: 566 AVSHFRTLEESSALAAANKRVSNILA---KSDETLNDIVHASVLKEAAEIKLAGNLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V Sbjct: 623 DKLQPYFAAGRYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|145634100|ref|ZP_01789811.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittAA] gi|145268544|gb|EDK08537.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittAA] Length = 688 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 345/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNGIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KAAALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAMPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFSDKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLVLRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTAVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|145630016|ref|ZP_01785798.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae R3021] gi|144984297|gb|EDJ91720.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae R3021] Length = 688 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 344/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRVPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|315633368|ref|ZP_07888659.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter segnis ATCC 33393] gi|315477868|gb|EFU68609.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter segnis ATCC 33393] Length = 688 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 207/722 (28%), Positives = 343/722 (47%), Gaps = 62/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGNKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA E I + AE+ L + +Q Sbjct: 570 FRTLDSAEALAAANKRVANILAKAEGD----IGAIDVALCVEPAEQVLAQSVLSLAKEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L + +P++ FFD V+VN +D ++R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGEYTAVLDKLAGLRQPVDNFFDNVMVNAEDAKLRQNRLAILNTLQGLFLQVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|283835937|ref|ZP_06355678.1| glycyl-tRNA synthetase, beta subunit [Citrobacter youngae ATCC 29220] gi|291068114|gb|EFE06223.1| glycyl-tRNA synthetase, beta subunit [Citrobacter youngae ATCC 29220] Length = 689 Score = 642 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 205/726 (28%), Positives = 337/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + TP RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGIAHGNVEWFATPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAQAQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAETLLPNMIATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + S D Y L V+ D R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDSADQYPEILRERGKVIADYAERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F+ K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEDKFLAVPSEALVHTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFYTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L+ Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLNLTTLIL 505 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 ++ F +R + + D D+I ++L + +K Sbjct: 506 KASRLYGDKLTNDNVLDDVETFMLNRFRAWYQDMGYSIDVILSVLELRPTEPVDFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F S + KR+ IL+ K+ ++ E+ P L E+ L ++ Sbjct: 566 AVTHFRSLPDAASLAAANKRVSNILS---KRVDVLNDEVHPALLTEPTEQVLAFKMAVVR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 I+ H Y + L S+ +P++ FF+ V+VN ++++VR NRL+LL ++ + L V Sbjct: 623 DRIKPLCQHFLYQEALTELASLRQPVDDFFENVMVNAENQDVRINRLTLLSKLRALFLEV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|219871686|ref|YP_002476061.1| glycyl-tRNA synthetase subunit beta [Haemophilus parasuis SH0165] gi|254781852|sp|B8F711|SYGB_HAEPS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219691890|gb|ACL33113.1| glycyl-tRNA synthetase subunit beta [Haemophilus parasuis SH0165] Length = 689 Score = 642 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 208/722 (28%), Positives = 348/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEAELNQAGLSFDKVEWFAAPRRLAVKVLGLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ + G+ +I D KG+ + Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ A+ K+P PK+MRW ++RP+ ++ +L +++ Sbjct: 123 EGQPTKNLLVGIISQALAKLPIPKTMRWGDKTE-----QFVRPVHTVTLLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF ++ D Y L+E V+ D R+ IL A Sbjct: 173 IEGEILGVASGTTVRGHRFLGEREFQISHADQYPALLKEKGSVVADFNERKALILAKAQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PSKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + LS + Sbjct: 450 SSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLSDLVATSAK 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNSNVVEEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K +IS EI L+ EK L + + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGKISSEIDRTLLVEAEEKALAEQVITLQAELV 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y D L + E ++ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 627 PLFEKGEYQTALDRLAGLREVVDNFFDKVMVNAEDPKLRQNRQAILNNLRNLFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|319897585|ref|YP_004135782.1| glycine tRNA synthetase, beta subunit [Haemophilus influenzae F3031] gi|317433091|emb|CBY81465.1| glycine tRNA synthetase, beta subunit [Haemophilus influenzae F3031] Length = 688 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 346/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLHLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QLSKEIEKRGPAVSAAFDGEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++ +L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEEHFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLANQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + + +AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTV----CVEQAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIEQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|251793743|ref|YP_003008473.1| glycyl-tRNA synthetase subunit beta [Aggregatibacter aphrophilus NJ8700] gi|247535140|gb|ACS98386.1| glycyl-tRNA synthetase, beta subunit [Aggregatibacter aphrophilus NJ8700] Length = 688 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 208/722 (28%), Positives = 343/722 (47%), Gaps = 62/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA DG+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAADGWARGCGITVEQAERIATD--KGEWLVRRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEGLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SVVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSTA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDDGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA E I + AE+ L + +Q Sbjct: 570 FRTLDSAEALAAANKRVANILAKAEGDV----GAIDVALCVEPAEQVLAQSVLSLAKEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L + +P++ FFD V+VN +D ++R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGEYTAVLDKLAGLRQPVDNFFDNVMVNAEDAKLRQNRLAILNTLQGLFLQVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|254293492|ref|YP_003059515.1| glycyl-tRNA synthetase subunit beta [Hirschia baltica ATCC 49814] gi|254042023|gb|ACT58818.1| glycyl-tRNA synthetase, beta subunit [Hirschia baltica ATCC 49814] Length = 722 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 272/752 (36%), Positives = 406/752 (53%), Gaps = 83/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLE++ EEIPARMQ KA DL ++ L E G++ + ++ + P RL + +GL Sbjct: 1 MPQLLLELFCEEIPARMQAKAQADLERAVMDKLSEAGLMAEGVKAFSGPRRLCVVAEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP+VGA +KAI GFLR GL +I +I++D KKG Y+AV+ KP Sbjct: 61 VKSADVREERKGPKVGAPEKAIAGFLRGAGLDSIEQAEIQEDKKKGQFYVAVINKPGVET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ +VP ++ WPKSMRW + W+RPL+ ILC E ++ ++ Sbjct: 121 TQIIANMVPEIVRSFHWPKSMRWGSRE-----MRWVRPLQRILCTFDGE-----VVPFEI 170 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAV 239 I N+T GHR P KV+ D Y L+ V+ D + R++ I +A L A Sbjct: 171 DGIASSNVTQGHRVMGAGPFKVRRFDDYSDILKNKGRVIYDRDERKDIIATEAKTLCDAQ 230 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGV 298 GLELV D LLEE+ GL E+ V MG D K+L LP E+I L+++ +QK F R + G Sbjct: 231 GLELVPDIGLLEEVAGLAEFPVVIMGDMDPKFLALPPEVITLSMRVHQKYFAVRDPKTGK 290 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FI+V+N++A DGG I GNS+V++ARL DA+ F++ D+ Sbjct: 291 LAPKFIVVANLEAEDGGKTIAAGNSKVLSARLSDAVFFYENDK----------------- 333 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 +K L++R L ++VFH K+GT ++ R+ L ++A ++ A A L+ Sbjct: 334 ---AKKLEERFDSLG--NIVFHEKLGTVKDKAERVAALAGELAPIVGAKKEDAIAAAKLA 388 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL E+V EF EL+G +G+ YA+ + + D I +H KP+GP ++VPT ++ V+ Sbjct: 389 KCDLVAEMVFEFTELEGVMGRYYAMEEGQPQHIADTIRDHYKPKGPSDDVPTEPTAVAVA 448 Query: 479 LADKLDTLINFWA-INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------ 531 LADKLDTL + + INE P+GSKDPYALRR+ LG+IR++LEN I + L + Sbjct: 449 LADKLDTLCSGFWTINELPTGSKDPYALRRSALGVIRLVLENNIRLKLEPCFSELAEIGF 508 Query: 532 -----------------------------------------QNLILFFHDRLKLYLHDRD 550 QNL+ FF DRLK+YL D+ Sbjct: 509 ALSPVSKAHWTEMWKLSQDVEADGTTFIEGTGFKDEAQTLAQNLLSFFEDRLKVYLRDKG 568 Query: 551 IRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE- 609 IRHDL++A+ D+L+ IV ++ L F + G+ + KR IL EEKK+ Sbjct: 569 IRHDLLDAVFSLGGDDLVLIVKRVEALGSFLETEDGKNLVSGHKRATNILQKEEKKDGSA 628 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 I+ EI + L AE L+ ++ + + ++ + + L + P++ FFD V+ Sbjct: 629 ITGEIDKKLLSDAAELALHEALNVATANAEAALKKEDFEGAMSALSLLRGPVDTFFDDVI 688 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN +D +VR+NRL LL I+++ V + KI Sbjct: 689 VNAEDNKVRENRLKLLARIRDVTSQVADFSKI 720 >gi|260581758|ref|ZP_05849555.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae NT127] gi|260095351|gb|EEW79242.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae NT127] Length = 688 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 345/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEMEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L + V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLRDKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G +++LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEENLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLLRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKAGAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRAPVDNFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|145636932|ref|ZP_01792596.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittHH] gi|145269790|gb|EDK09729.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittHH] Length = 688 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 344/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 KGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLLRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLSRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRVPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|254362729|ref|ZP_04978813.1| glycine--tRNA ligase [Mannheimia haemolytica PHL213] gi|261491870|ref|ZP_05988449.1| glycine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|153094354|gb|EDN75209.1| glycine--tRNA ligase [Mannheimia haemolytica PHL213] gi|261312525|gb|EEY13649.1| glycine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 688 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 200/722 (27%), Positives = 352/722 (48%), Gaps = 62/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + + L+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKVLSLAES 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ + G+ +I D KG+ + Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK+MRW ++RP+ ++ + AE + Sbjct: 123 EGQPTKNLLVDIIAKSLANLPIPKTMRWGDKTE-----QFVRPVHTVTLLFGAE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF ++++ D Y + L++ V+ D R+ IL + Sbjct: 173 IEGEILGVKSGRTIRGHRFLGEREFQIENADQYPQLLKDRGSVVADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F + Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEYPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYS 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PSKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQKLEDQLPRLET--VLFQQQLGTLRDKTARIEALAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR +N+P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L+ + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLTDLVAKSAQ 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNKDVVEDVVDFMLGRFRAWYESEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + +I + AEK L + +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKAD----IAIGDIDVSACVEPAEKALAEAVIALKAEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ +P++ FFD V+VN +D+++R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTAVLDKLANLRQPVDAFFDGVMVNAEDQKLRQNRLAILSTLQGLFLQVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|159044945|ref|YP_001533739.1| glycyl-tRNA synthetase subunit beta [Dinoroseobacter shibae DFL 12] gi|238686865|sp|A8LS45|SYGB_DINSH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157912705|gb|ABV94138.1| glycyl-tRNA synthetase beta chain [Dinoroseobacter shibae DFL 12] Length = 720 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 275/745 (36%), Positives = 397/745 (53%), Gaps = 71/745 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ +AA+DL ++ L E G+ Y R Y TP RL L + + Sbjct: 1 MPELLIELFSEEIPARMQARAAQDLQKLVTNGLVEAGITYAGARAYATPRRLTLVVSDML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GP+ A +KAI+GFLRSTGL ++ KGDV AV+ KP R Sbjct: 61 AASAPVREERKGPKADAPEKAIEGFLRSTGLGREQLET--RETPKGDVLFAVIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + S+ W+RPL ILC++ E +I+ L + Sbjct: 119 AEIVAEVLETTIRNFPWPKSMRWGS-----SSLRWVRPLHRILCLIRDE-EGAEIVPLTV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G++T GHRF AP IKV + Y L A V+LD E R I DA A A G Sbjct: 173 DGITAGDVTEGHRFLAPGEIKVHGFEDYETKLRRAKVILDAEERAEHIWADATNQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVE+ MG D +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDRRLLSEVAGLVEFPVPLMGEIDADFLDLPPEVLQTSMKEHQKFFSVRDLKSGKI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW+ D Sbjct: 293 VRFVTVANTETTDHGATILAGNRKVLSARLADAKFFWENDLRIARAGMQPW--------- 343 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 R + +V FH K+G+Q R++RI L +A + AD A L+KA Sbjct: 344 ----------REALENVTFHNKLGSQAARIARIADLAATLAPQVGADPDAARTAAELAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA ++H +P GP + VPT +SI V+LA Sbjct: 394 DLSSEMVFEFPELQGLMGRYYAEAAGHPAEIAAVAQDHYQPLGPSDAVPTAPLSIAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ------------- 527 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IRI+LEN + +PL Sbjct: 454 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRIVLENGLRLPLINSVKHHNSENTSRP 513 Query: 528 -----------------------------FIEDQNLILFFHDRLKLYLHDRDIRHDLIEA 558 +L+ FFHDRLK++L D IRHD+I+A Sbjct: 514 LFSALVAHAKTDQERADGSKSMSDWKALVARSQDDLLSFFHDRLKVFLRDEGIRHDIIDA 573 Query: 559 ILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISP 616 L ND+LL +V+ + L+E + GE L KR IL E+ + E S P Sbjct: 574 CLAMEGNDDLLLLVNRARALSETLKTEDGENLLQGFKRANNILTQAEEADGVEYSYGADP 633 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 ++ + E+ L+A + I +++ + + + S+ P++ FF+ V VN +++ Sbjct: 634 KFAETDEERALFAALDTAEAVIDPALEAEDFAAATAAMASLRAPLDAFFEAVQVNAENQI 693 Query: 677 VRDNRLSLLQYIKNIILIVINVQKI 701 +R NRL+LL I+ L + ++ +I Sbjct: 694 LRRNRLNLLSRIRATCLKLADLTRI 718 >gi|148826424|ref|YP_001291177.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittEE] gi|229845983|ref|ZP_04466095.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 7P49H1] gi|166227914|sp|A5UDE3|SYGB_HAEIE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|148716584|gb|ABQ98794.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittEE] gi|229810987|gb|EEP46704.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 7P49H1] gi|309973574|gb|ADO96775.1| Glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae R2846] Length = 688 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 345/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELIQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHCAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFSDKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLVLRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTAVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|316932589|ref|YP_004107571.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris DX-1] gi|315600303|gb|ADU42838.1| glycyl-tRNA synthetase, beta subunit [Rhodopseudomonas palustris DX-1] Length = 746 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 302/766 (39%), Positives = 417/766 (54%), Gaps = 87/766 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQGKAADDLKRLVTDKLVAEGLVYEGAKAFATPRRLTLTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEAKIQRDPKKGDFYVALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ I+PV ++ PWPKSMRW + A W+RPL SI+ + + ++ ++ Sbjct: 121 IEVIAEILPVIVRTFPWPKSMRWGARSAKPGALQWVRPLHSIVATFGIDTEEPDVVHFNV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP +V+ + Y L A V+LDP+ RR+ IL DA LA A Sbjct: 181 DGIEAGQTTRGHRFMAPDAFEVRRFEDYEAKLFAAKVVLDPQRRRDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 ELVED LL+E+ GLVEW MGSFDK +L +P+E+IR TI+ NQKCFV G L Sbjct: 241 YELVEDAGLLDEVSGLVEWPVPLMGSFDKDFLSIPDEVIRATIRANQKCFVVADPATGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL +NI+ASDGGAAI GN RV+ ARL DA F++ D Sbjct: 301 ANKFILTANIEASDGGAAITAGNERVIRARLSDAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + D +VFH K+GTQ ER+ RI L +IA L+ ADV RA L K Sbjct: 342 -LKTKLEDRLPKFDQ--IVFHEKLGTQAERIERIERLAAEIAPLVGADVEKTKRAAKLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPADRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-------------- 525 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR+I++NK+ + + Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLIVDNKLRLNIFDLSARPFARNAKA 518 Query: 526 ---SQFIEDQNLILFFHD-----------------RLKLYLHDRDIRHDLIEAILRP--- 562 +F L+ D R + + + +A L Sbjct: 519 VLFDEFRAAMELVQRVEDELPPGTIISISELATAFRYRQIAEADLVAGQMRKAALDLLSF 578 Query: 563 --------------------------ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 D++L IV ++ L F ++ G+ L KR Sbjct: 579 FADRLKVQLRDQGARHDLVDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLLAGTKRA 638 Query: 597 FQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 IL IEEKK+ R + E+ L A I ++ + + + Sbjct: 639 ANILRIEEKKDGRAFDGAPDASLYAQDEERALAAAIDRAKAEAGAAVAKEDFAAAMTAMA 698 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FFD+V VN DD+ VR+NRL LL I+ V + KI Sbjct: 699 GLRPAVDAFFDKVTVNADDKAVRENRLKLLNEIRAATRAVADFSKI 744 >gi|126461281|ref|YP_001042395.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides ATCC 17029] gi|229558571|sp|A3PH07|SYGB_RHOS1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|126102945|gb|ABN75623.1| Glycine--tRNA ligase [Rhodobacter sphaeroides ATCC 17029] Length = 697 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 266/721 (36%), Positives = 392/721 (54%), Gaps = 46/721 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL ++ KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGLTRDRLET--REDKKGAVLFAVVEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL+SILC+L E +++ + L Sbjct: 119 PEIVAEVLERTIRTFPWPKSMRWG-----TGSLRWVRPLQSILCLLSDE-GGAEVVPMTL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + GN T GHRF AP V + Y L A V+LD R AI ++A A A G Sbjct: 173 DGLTAGNSTEGHRFMAPARFAVSGFEDYRAKLGRAFVMLDASEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V D LL E+ GLVEW V MG+ + +L LP E+++ +++ +QK F Sbjct: 233 LEVVPDAALLSEVAGLVEWPVVLMGAIGEDFLGLPPEVLQTSMREHQKFFSVTNPATGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D G I++GN +V++ARL DA FW+ D + Sbjct: 293 EKFVTVANRETADHGETILKGNGKVLSARLSDARFFWENDLRTVKTAG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ L V FH ++G+Q +R++RI L ++IA L+ A L A ++KA Sbjct: 341 ----LEGMAEGLKQ--VTFHNRLGSQADRIARIEALAREIAPLVGASPDLAAEAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA + A + H +P GP + VPT+ +S+ V+LA Sbjct: 395 DLQSAMVGEFPELQGTMGSYYARAAGLPEAVAQACKAHYQPLGPSDAVPTDPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------- 529 DK+DTL FW I EKP+GSKDP+ALRRA LG+IR++L N L + Sbjct: 455 DKIDTLAGFWRIGEKPTGSKDPFALRRAALGVIRLLLTNNSRAGLMGIMLPAMNRHLEPF 514 Query: 530 -------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFF 581 ++ L+ FFHDRLK++L ++ IRHD+I+A L P ND+L +V + L+ F Sbjct: 515 DTSDFTPYERELLSFFHDRLKVHLREQGIRHDVIDACLAMPGNDDLTLLVKRAEALSAFL 574 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + G L KR IL E K+ E S P++ +AE+ L+A + I Sbjct: 575 KTDDGTNLLQGFKRANNILTQAEAKDGVEYSFGADPKFAETDAERALFAALETAEAAIGP 634 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + + + ++ PI+ FF+ V VN D+ +R NRL++L I+ V ++ + Sbjct: 635 ALQAEDFAAAMSAMAALRAPIDAFFETVQVNADNAVLRRNRLNMLHSIRATCARVADLTR 694 Query: 701 I 701 I Sbjct: 695 I 695 >gi|85711017|ref|ZP_01042078.1| glycyl-tRNA synthetase beta subunit [Idiomarina baltica OS145] gi|85695421|gb|EAQ33358.1| glycyl-tRNA synthetase beta subunit [Idiomarina baltica OS145] Length = 688 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 214/721 (29%), Positives = 354/721 (49%), Gaps = 60/721 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 L+E+ +EE+P + + +E + L + + + ++ TP RL + + L Sbjct: 5 TLLVELGTEELPPKALKQLSESFKHGIEEGLNKAELAFGEIKALATPRRLAVLVNSLEGQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ RS G++ +++ D KG L Sbjct: 65 QQDKVVEKRGPSVDVAFDEAGQPTKAAQGWARSNGIEVSEAERLETD--KGAWLLHKAEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + VL IV A++K+P PK MRW + + +IRP+ ++ + +++ Sbjct: 123 KGESLAQVLPGIVEDALKKLPIPKPMRWGDSDA-----QFIRPVHTLTLLF-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ L I G HRFHAP +Q D Y L + V+ D R I + L Sbjct: 173 INASLLGIKSGRHINAHRFHAPDGFDIQHADDYEAQLYKHHVIADQAKRMELIRTSINDL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS +G + D+DL+EE+ LVEW SFD+++L +P+E + +T+K +Q+ F + Sbjct: 233 ASQLGGTVETDEDLVEEVSALVEWPVALSASFDEQFLTVPKEALIVTMKDDQRYFPVQDD 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI ++NI + D I++GN RVV RL DA F++ D+ Sbjct: 293 KGELKPVFIFITNIDSKD-PKQIIKGNERVVRPRLADAQFFFESDK-------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L R+ +L V+F ++GT ++ RI L +IA ++AD A Sbjct: 338 ------KVTLSSRLDKLGT--VLFQKQLGTMKDKSERISRLSARIAGSLNADEQHARLAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L K DL T++V EFPE QG +G+ YA+ + DAIE+H PR +N+PT+ +S Sbjct: 390 ELCKTDLVTDMVSEFPETQGVMGRHYALNDGLDAEVADAIEQHYWPRFAGDNLPTSDVSR 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 +V+LADKLD+L+ + I + P G +DP+ALRRA LG+IRII+E+ +++ L + I+ Sbjct: 450 SVALADKLDSLVGIFGIGQTPKGDRDPFALRRAALGLIRIIVESNLNLDLYELIDAAIGE 509 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +N+ F R + + ++ I D+I+A+L I ++ F Sbjct: 510 FGDRLSNNDVRENVFNFIIGRFRPWYQEQGISVDVIQAVLARAPSRPADFNLRIHAVDAF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 E + KR+ IL+ K +++ +I L+ EK L A IS+ + Sbjct: 570 KQHDAAESLSAANKRVGNILS---KSEGDLTGKIDHTLLVAAEEKTLAAQISETEKSAEP 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + Y + S+ PI+ FF+ V+VN +D VR NRL+LL ++ + L V ++ Sbjct: 627 EIAAGNYEGALTRMASLKSPIDDFFENVMVNDEDPAVRQNRLNLLYQLRGMFLRVADISL 686 Query: 701 I 701 + Sbjct: 687 L 687 >gi|294638314|ref|ZP_06716567.1| glycyl-tRNA synthetase, beta subunit [Edwardsiella tarda ATCC 23685] gi|291088567|gb|EFE21128.1| glycyl-tRNA synthetase, beta subunit [Edwardsiella tarda ATCC 23685] Length = 689 Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 200/720 (27%), Positives = 343/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + A+ + L G+ + ++ + P RL L + L Sbjct: 5 TFLVEIGTEELPPKALRSLAQAFADNFRSELDNAGLAHGDIAWFAAPRRLALKVAALDAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP + G KA +G+ R G+ ++ KG+ L ++ Sbjct: 65 QPDREIEKRGPAIAQAFDADGKPTKAAEGWARGCGISVEQAERL--TTDKGEWLLYRAQQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L T+V A+ ++P PK MRW + ++RP+ ++ +L +E Sbjct: 123 KGQRAQELLPTLVANALSRLPIPKLMRWGANDT-----QFVRPVHTVTLLLGSE-----S 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + + D Y + LE V+ D E R+ I DA Sbjct: 173 IPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAQIKRDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAARIGGQADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI V+N+ + D I+ GN +VV RL DA F+K D+ Sbjct: 293 AQGKLLPNFIFVANVDSKDA-QQIIAGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++G+ ++ RI L IAQ I ADV + RA Sbjct: 339 -------KQRLEDNLPRLE--SVLFQQQLGSLRDKTDRIAALAGWIAQQIGADVNMATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E ++ E PR + +P++ ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVAVSLNEQYMPRFAGDALPSSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L ++ Sbjct: 450 CAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLLTLTQEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + + D I+A+L ++ ++ Sbjct: 510 LYGDKLSNAKVVEDVVDFMLGRFRAWYQEEGHAVDTIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K + ++ ++ L AE RL A + + Sbjct: 570 FRTLDEAATLAAANKRVSNILA---KSSDTLADQVQATLLKEAAEIRLAANLITLQEKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ +P++ FF+QV+V DD +VR NRL+LL ++++ L V ++ Sbjct: 627 PLFAAGQYQEALVELATLRQPVDDFFEQVMVMADDEQVRINRLTLLSKLRDLFLQVADIS 686 >gi|261494658|ref|ZP_05991138.1| glycine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309623|gb|EEY10846.1| glycine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] Length = 688 Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 201/722 (27%), Positives = 351/722 (48%), Gaps = 62/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + + L+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQSGLAFEKVEWFAAPRRLAVKVLSLAES 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK+MRW ++RP+ ++ + AE + Sbjct: 123 EGQPTKNLLVDIIAKSLANLPIPKTMRWGDKSE-----QFVRPVHTVTLLFGAE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF +++ D Y + L++ V+ D R+ IL + Sbjct: 173 IEGEILGVKSGRTIRGHRFLGEREFTIENADQYPQLLKDRGSVVADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F + Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEYPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYS 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PSKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQKLEDQLPRLET--VLFQQQLGTLRDKTARIEALAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR +N+P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L+ + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLTDLVAKSAQ 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNKDVVEDVVDFMLGRFRAWYESEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + +I + AEK L + +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKAD----IAIGDIDVSACVEPAEKALAEAVIALKAEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ +P++ FFD V+VN +D+++R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTAVLDKLANLRQPVDAFFDGVMVNAEDQKLRQNRLAILSTLQGLFLQVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|77462404|ref|YP_351908.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides 2.4.1] gi|123757774|sp|Q3J5C7|SYGB_RHOS4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|77386822|gb|ABA78007.1| Glycyl-tRNA synthetase, beta subunit [Rhodobacter sphaeroides 2.4.1] Length = 697 Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 267/721 (37%), Positives = 393/721 (54%), Gaps = 46/721 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL ++ KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGLTRDQLET--REDKKGAVLFAVVEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL+SILC+L E A +++ + L Sbjct: 119 PEIVAEVLERTIRTFPWPKSMRWG-----TGSLRWVRPLQSILCLLSDE-AGAEVVPMTL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + GN T GHRF AP V + Y L A V+LD R AI ++A A A G Sbjct: 173 DGLTAGNSTEGHRFMAPARFAVSGFEDYRAKLARAFVMLDASEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V D LL E+ GLVEW V MG+ + +L LP E+++ +++ +QK F Sbjct: 233 LEVVPDAALLSEVAGLVEWPVVLMGAIGEDFLGLPPEVLQTSMREHQKFFSVTNPATGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D G I++GN +V++ARL DA FW+ D + Sbjct: 293 EKFVTVANRETADHGETILKGNGKVLSARLSDARFFWENDLRTVKTAG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ L V FH ++G+Q R++RI L ++IA L+ A L A ++KA Sbjct: 341 ----LEGMAEGLKQ--VTFHNRLGSQAARIARIEALAREIAPLVGASPDLAAEAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA + A + H +P GP + VPT+ +S+ V+LA Sbjct: 395 DLQSAMVGEFPELQGTMGSYYARAAGLPEAVAQACKAHYQPLGPSDAVPTDPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------- 529 DK+DTL FW I EKP+GSKDP+ALRRA LG+IR++L N L + Sbjct: 455 DKIDTLAGFWRIGEKPTGSKDPFALRRAALGVIRLLLTNNSRAGLMGIMLPAMNRHLEPF 514 Query: 530 -------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFF 581 +++L+ FFHDRLK++L ++ IRHD+I+A L P ND+L +V + L+ F Sbjct: 515 DTSDFTPYERDLLAFFHDRLKVHLREQGIRHDVIDACLAMPGNDDLTLLVKRAEALSAFL 574 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + G L KR IL E K+ E S P++ +AE+ L+A + I Sbjct: 575 KTDDGTNLLQGFKRANNILTQAEAKDGVEYSFGADPKFAETDAERALFAALETAEAAIGP 634 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + + + ++ PI+ FF+ V VN D+ +R NRL++L I+ V ++ + Sbjct: 635 ALQAEDFAAAMSAMAALRAPIDAFFETVQVNADNAVLRRNRLNMLHSIRATCARVADLTR 694 Query: 701 I 701 I Sbjct: 695 I 695 >gi|332560288|ref|ZP_08414610.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides WS8N] gi|332278000|gb|EGJ23315.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides WS8N] Length = 697 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 269/721 (37%), Positives = 392/721 (54%), Gaps = 46/721 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL ++ KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGLTRDQLET--REDKKGAVLFAVVEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL+SILC+L E A +++ + L Sbjct: 119 PEIVAEVLERTIRTFPWPKSMRWG-----TGSLRWVRPLQSILCLLSDE-AGAEVVPMTL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + GN T GHRF AP V D Y L A V+LD R AI ++A A A G Sbjct: 173 DGLTAGNSTEGHRFMAPARFAVSGFDDYRAKLARAFVMLDASEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V D LL E+ GLVEW V MG+ + +L LP E+++ +++ +QK F Sbjct: 233 LEVVPDAALLSEVAGLVEWPVVLMGAIGEDFLGLPPEVLQTSMREHQKFFSVTNPATGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I++GN +V++ARL DA FW+ D + Sbjct: 293 EKFVTVANRETADHGATILKGNGKVLSARLSDARFFWENDLRTVKTAG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ L V FH +G+Q R++RI L ++IA L+ A L A ++KA Sbjct: 341 ----LEGMAEGLKQ--VTFHNMLGSQAARIARIEALAREIAPLVGASPDLAAEAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA + A + H +P GP + VPT+ +S+ V+LA Sbjct: 395 DLQSAMVGEFPELQGTMGSYYARAAGLPEAVAQACKAHYQPLGPSDAVPTDPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------- 529 DK+DTL FW I EKP+GSKDP+ALRRA LG+IR++L N L + Sbjct: 455 DKIDTLTGFWRIGEKPTGSKDPFALRRAALGVIRLLLTNNSRAGLMGIMLPAMNRHLEPF 514 Query: 530 -------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFF 581 ++ L+ FFHDRLK++L ++ IRHD+I+A L P ND+L +V + L+ F Sbjct: 515 DTSDFTPYERELLAFFHDRLKVHLREQGIRHDVIDACLAMPGNDDLTLLVKRAEALSGFL 574 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + G L KR IL E K+ E S P++ +AE+ L+A + I Sbjct: 575 KTDDGTNLLQGFKRANNILTQAEAKDGVEYSFGADPKFAETDAERALFAALETAEAAIGP 634 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + + + ++ PI+ FF+ V VN D+ +R NRL++L I+ V ++ + Sbjct: 635 ALQAEDFAAAMSAMAALRAPIDAFFETVQVNADNAVLRRNRLNMLHSIRATCARVADLTR 694 Query: 701 I 701 I Sbjct: 695 I 695 >gi|290511859|ref|ZP_06551227.1| glycyl-tRNA synthetase, beta subunit [Klebsiella sp. 1_1_55] gi|289775649|gb|EFD83649.1| glycyl-tRNA synthetase, beta subunit [Klebsiella sp. 1_1_55] Length = 689 Score = 638 bits (1645), Expect = e-180, Method: Composition-based stats. Identities = 204/726 (28%), Positives = 337/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSENTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ ++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAAAQADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMIASSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + IP + GHRF + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLMTLTA 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++ F +R + + D D I ++L + +K Sbjct: 506 EAIRLYGDKLTNPNTLDDVETFMLNRFRAWYQDMGFSIDTILSVLELRPTMPVDFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F S + KR+ IL+ K+ ++ + P L AE+ L ++ Sbjct: 566 AVTYFRSQPDAASLAAANKRVSNILS---KRVDVLNDSVHPALLTERAEQELAFKLAVVR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 I+ + +Y L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V Sbjct: 623 DRIKPLCQNLQYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|145632310|ref|ZP_01788045.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae 3655] gi|144987217|gb|EDJ93747.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae 3655] Length = 688 Score = 637 bits (1643), Expect = e-180, Method: Composition-based stats. Identities = 208/720 (28%), Positives = 343/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 KGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L + V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLRDKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYLPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDKLPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLLLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRVPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|269137370|ref|YP_003294070.1| glycyl-tRNA synthetase, beta subunit [Edwardsiella tarda EIB202] gi|267983030|gb|ACY82859.1| glycyl-tRNA synthetase, beta subunit [Edwardsiella tarda EIB202] gi|304557471|gb|ADM40135.1| Glycyl-tRNA synthetase beta chain [Edwardsiella tarda FL6-60] Length = 689 Score = 637 bits (1643), Expect = e-180, Method: Composition-based stats. Identities = 204/720 (28%), Positives = 340/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + A+ + L G+ + ++ + P RL L + L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAQAFADNFRTELDNAGLAHGDIEWFAAPRRLALKVAALNAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP + G KA +G+ R G+ ++ KG+ L + Sbjct: 65 QPDREIEKRGPAIAQAFDADGKPTKAAEGWARGCGISVDQADRL--STDKGEWLLYRALQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +D+L T V A+ ++P PK MRW + + ++RP+ ++ +L +E Sbjct: 123 KGQRAQDLLPTRVANALSRLPIPKLMRWGDSDT-----QFVRPVHTVTLLLGSE-----S 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + +P + GHRF + S D Y + LE V+ D + R+ I DA Sbjct: 173 IPATILGVPSDRVIRGHRFMGEAEFTIDSADQYPQILLERGKVIADYDARKALIKRDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAARIGGVADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI + D I+ GN +VV RL DA F+K D+ Sbjct: 293 AAGKLLPNFIFVANIDSKDA-QQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++G+ ++ RI L IAQ I ADV + RA Sbjct: 339 -------KQRLEDNLPRLET--VLFQQQLGSLRDKTDRITALAGWIAQQIGADVNMATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E PR + +PT+ ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEADEVAVALNEQYMPRFAGDALPTSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RI++E K+ + L ++ Sbjct: 450 CAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIVVEKKLPLDLLTLTQEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L ++ ++ Sbjct: 510 LYGDKLSNANVVDDVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K ++ ++ L AE RL A + + Sbjct: 570 FRTLPEAATLAAANKRVSNILA---KSGDVLAEQVQAVLLKEPAEIRLAANLITLQEKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY + L ++ +P++ FF+QV+V DD +VR NRL+LL ++++ L V ++ Sbjct: 627 PLFADGRYQEALVELATLRQPVDDFFEQVMVMADDEQVRINRLTLLNKLRDLFLQVADIS 686 >gi|238917996|ref|YP_002931510.1| glycyl-tRNA synthetase subunit beta [Edwardsiella ictaluri 93-146] gi|259511924|sp|C5B995|SYGB_EDWI9 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238867564|gb|ACR67275.1| glycyl-tRNA synthetase, beta subunit, putative [Edwardsiella ictaluri 93-146] Length = 689 Score = 637 bits (1642), Expect = e-180, Method: Composition-based stats. Identities = 203/720 (28%), Positives = 340/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + A+ + L G+ + ++ + P RL L + L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAQAFADNFRTELDNAGLAHGDIEWFAAPRRLALKVAALNAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP + G KA +G+ R G+ ++ KG+ L + Sbjct: 65 QPDREIEKRGPAIAQAFDAEGKPTKAAEGWARGCGISVDQAERL--STDKGEWLLYRALQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +D+L +V A+ ++P PK MRW + + ++RP+ ++ +L +E Sbjct: 123 KGQRAQDLLPALVASALSRLPIPKLMRWGDSDT-----QFVRPVHTVTLLLGSE-----S 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + +P + GHRF + S D Y + LE V+ D + R+ I DA Sbjct: 173 IPATILGVPSDRVIRGHRFMGEAEFTLDSADQYPQILLERGKVIADYDARKALIKRDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAARIGGVADLSDSLLEEVTSLVEWPVVLTARFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI + D I+ GN +VV RL DA F+K D+ Sbjct: 293 AAGKLLPNFIFVANIDSKDA-QQIIAGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++G+ ++ RI L IAQ I ADV + RA Sbjct: 339 -------KQRLEDNLPRLE--SVLFQQQLGSLRDKTDRITALAGWIAQQIGADVNMATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E PR + +PT+ ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDALPTSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RI++E K+ + L ++ Sbjct: 450 CAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIVVEKKLPLDLLTLTQEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L ++ ++ Sbjct: 510 LYGDKLGNASVVDDVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K ++ ++ L AE RL A + + Sbjct: 570 FRTLPEAATLAAANKRVSNILA---KSGDVLAEQVQAVLLKEPAEIRLAANLITLQEKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY + L ++ +P++ FF+QV+V DD +VR NRL+LL ++++ L V ++ Sbjct: 627 PLFADGRYQEALVELATLRQPVDDFFEQVMVMADDEQVRINRLTLLNKLRDLFLQVADIS 686 >gi|307246733|ref|ZP_07528803.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255718|ref|ZP_07537522.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260170|ref|ZP_07541880.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852433|gb|EFM84668.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861395|gb|EFM93385.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865816|gb|EFM97694.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 689 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 346/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+FH ++GT ++ +RI L +IA I AD A +RA Sbjct: 338 ------LKQRLEDRLPRLET--VLFHQQLGTLRDKTARIEALAGEIAAQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLSLDLEDLVRKSAV 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + T + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISTEIDRSLLVEAEEKALAEQVISLQTELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|293412993|ref|ZP_06655661.1| glycyl-tRNA synthetase [Escherichia coli B354] gi|291468640|gb|EFF11133.1| glycyl-tRNA synthetase [Escherichia coli B354] Length = 689 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTMLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|153007867|ref|YP_001369082.1| glycyl-tRNA synthetase subunit beta [Ochrobactrum anthropi ATCC 49188] gi|151559755|gb|ABS13253.1| glycyl-tRNA synthetase, beta subunit [Ochrobactrum anthropi ATCC 49188] Length = 764 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 335/762 (43%), Positives = 444/762 (58%), Gaps = 61/762 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L E G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVEAGLTYEAATPYWTPRRLTLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL ++ + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVTAPEQAIQGFLRKAGLTDVAQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ +VP I+ PWPKSMRW + + W+RPL+SILC E + +ID D+ Sbjct: 121 EEIVAELVPQTIRNFPWPKSMRWGAASARPGSLRWVRPLQSILCTFGPETEETVVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + PIKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQPIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGEAE 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILVSNI A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF Sbjct: 301 ALSNKFILVSNIAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLVASAEKF 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 LDL KPLDQRMARLD L+V FHAK+GTQG RV RIR L +IA L+ AD L RA VL Sbjct: 361 GLDLKKPLDQRMARLDALNVTFHAKLGTQGARVERIRELAAQIAPLVGADPKLAARAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TE+V EFPELQG +G++YA+LQ E+ + AIEEH KP+GP + VP N +S+ V Sbjct: 421 AKADLTTEVVGEFPELQGAMGRKYALLQGEDEAVAAAIEEHYKPQGPSDVVPKNPVSVAV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 +LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG+IR++L + PL Sbjct: 481 ALADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALK 540 Query: 531 ----DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND--------------NLLTIV- 571 + L F D D D+ A+ E +LL+ + Sbjct: 541 EGQVQRKLREFETKLAGENSGDIDGEQDVDNALASYEKQVRAEAEASSEPVLADLLSFLH 600 Query: 572 -----------DLIKHLNEFF---------------------SSAKGEKFLLSAKRIFQI 599 ++ + G+ L KR I Sbjct: 601 DRFKVHLKEEGARYDAIDAVLSPEADNLLLVARRLEALIVFINEEDGKNLLAGTKRAANI 660 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK +++ +S L EK L+ ++ + ++ + ++ L + Sbjct: 661 LAAEEKKGTKVADSVSASLLHEAEEKALFEAVTLASQDAEAAIAREDFNGAMLALAKLRG 720 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF++VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 PVDTFFEKVLVNDEDENVRANRLALLDQIRAATGKVADFSKI 762 >gi|331685221|ref|ZP_08385807.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H299] gi|331077592|gb|EGI48804.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H299] Length = 689 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNTNVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAASLAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|307251102|ref|ZP_07533026.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306856932|gb|EFM89064.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 689 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 345/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +RA Sbjct: 338 ------LKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGNKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + T + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISTEIDRSLLVEAEEKALAEQVISLQTELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|229844013|ref|ZP_04464154.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 6P18H1] gi|229813007|gb|EEP48695.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 6P18H1] Length = 688 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 344/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNGIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYLPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDKLPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLLLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRVPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|52426011|ref|YP_089148.1| glycyl-tRNA synthetase subunit beta [Mannheimia succiniciproducens MBEL55E] gi|81825482|sp|Q65R47|SYGB_MANSM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|52308063|gb|AAU38563.1| GlyS protein [Mannheimia succiniciproducens MBEL55E] Length = 689 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 209/722 (28%), Positives = 349/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ ++ + P RL + + L+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLTFEKVQWFAAPRRLAVKVLNLATS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPTKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERLATD--KGEWLVHRATI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++++ IV ++ +P PK MRW ++RP+ ++ +L E + Sbjct: 123 EGQPTKNLMLDIVTRSLANLPIPKMMRWGDKTE-----QFVRPVHTVSLLLGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ I G GHRF ++ D Y + L++ V+ D RR IL D+ Sbjct: 173 IEGEILGIASGRTIRGHRFLGEAEFQIAHADEYPQILKDKGSVIADFNERRAIILADSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 ASA+G + DLL+E+ LVE+ V +F++++L +P E + T+K +QK F Sbjct: 233 KASALGGVADIEDDLLDEVTSLVEFPNVLTATFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI VSNI +D I++GN +VV RL DA F+ D+ Sbjct: 293 KNGKLLPHFIFVSNINPTD-PTPIIEGNEKVVRPRLSDAEFFFNTDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ RI+ L +IA I AD A +RA Sbjct: 339 -------KQRLEDLLPRLET--VLFQQQLGTLLDKTKRIQALAGEIATQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR +N+P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L++ ++ Sbjct: 450 SSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLAEIVKKSTA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFADRLTNQNVVDDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS +I LL EK L + + + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KIEGEISSKIDRTLLLEPEEKALAEQVLALQSELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y D L + E I+ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 627 PLFAKGEYQPALDRLAGLREVIDNFFDKVMVNAEDEKLRQNRQAILNTLRNLFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|144897875|emb|CAM74739.1| glycyl-tRNA synthetase beta chain [Magnetospirillum gryphiswaldense MSR-1] Length = 690 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 265/722 (36%), Positives = 401/722 (55%), Gaps = 55/722 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LLEI+SEEIPARMQ +AAEDL ++ L + G+ + R Y TP RL L ++GL Sbjct: 1 MAELLLEIFSEEIPARMQARAAEDLLRMVTEGLGKNGLTFDGARSYVTPRRLVLVIEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EE+ GPRVGA ++A+ GFL STG+ K+D KG+ Y A++ K R Sbjct: 61 TAGPDVSEEKRGPRVGAPEQAMAGFLSSTGMALEQLE--KRDTGKGEFYFAIINKKGRPT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D K ++ A+ PWPKS RW W+RPL+SILC+ ++ + Sbjct: 119 VDAAKEVIEAAMADFPWPKSQRWG-----TETVRWVRPLQSILCLFAG-----AVVPVSF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN++ GHRF AP V Y L A V+LDP RR+AIL A A+A G Sbjct: 169 GPITAGNVSRGHRFLAPADFTVTDFADYSTKLAAAKVVLDPVERRHAILRQAEEAAAAAG 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L D LL E+ GLVE+ V +G D K++ +P+E++ +++++QK F +G LA Sbjct: 229 FALRADDGLLAEVTGLVEYPNVMIGVIDDKFMAVPQEVLITSMRSHQKYFSLLKADGSLA 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F++VSN++ +D GAAI GN RV+ ARL DA FW D+ Sbjct: 289 PRFLVVSNMETNDNGAAITAGNQRVLRARLSDAAFFWDTDR------------------- 329 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALVDRAIVLSK 419 + LD R+ +L +F+AK+GT ++V R+ +L + + ++ A +RA L+K Sbjct: 330 -KQRLDSRLPKLAER--LFYAKLGTMADKVERMAILARHLTAFVEAAHADEAERAARLAK 386 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G+ YA+ E + DAI H P+GP ++VPT ++I +L Sbjct: 387 ADLSTEMVGEFPELQGIMGRYYALNDGETPAVADAIAGHYAPQGPSDSVPTAPLTICAAL 446 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADK+D+L+ F+AI+EKP+GSKDP+ALRRA LG+IR+++EN + +PL ++ Sbjct: 447 ADKIDSLVGFFAIDEKPTGSKDPFALRRAALGVIRLVVENNLRLPLFAVLQFAHSLYKPG 506 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEF 580 +L+ FF DR+K++L ++ +RHDL+ AI + D+L+ ++ + L +F Sbjct: 507 VLSADPRMVANDLLDFFADRMKVHLKEKGVRHDLVNAIFALGDEDDLVRLLARVDALADF 566 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 SS G L++ +R I+ IEEKK+ + L E+ L ++ + Sbjct: 567 LSSDDGSNLLIAYRRAANIVKIEEKKDGTSFAGPADVSRLKEPEEQALGQALAPARDALA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + L + P++ FFD+V VN D E+R NRL LL I + V + Sbjct: 627 HALKAEDFADAMAALAQLRRPVDAFFDKVTVNADQAELRVNRLKLLAEIGAAMGEVADFS 686 Query: 700 KI 701 K+ Sbjct: 687 KV 688 >gi|218550844|ref|YP_002384635.1| glycyl-tRNA synthetase subunit beta [Escherichia fergusonii ATCC 35469] gi|218707192|ref|YP_002414711.1| glycyl-tRNA synthetase subunit beta [Escherichia coli UMN026] gi|293407181|ref|ZP_06651105.1| glycyl-tRNA synthetase beta subunit [Escherichia coli FVEC1412] gi|298382930|ref|ZP_06992525.1| glycyl-tRNA synthetase beta subunit [Escherichia coli FVEC1302] gi|300898729|ref|ZP_07117041.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 198-1] gi|331665183|ref|ZP_08366084.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA143] gi|331675048|ref|ZP_08375805.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA280] gi|226737054|sp|B7NEL0|SYGB_ECOLU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226737056|sp|B7LTH3|SYGB_ESCF3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218358385|emb|CAQ91032.1| glycine tRNA synthetase, beta subunit [Escherichia fergusonii ATCC 35469] gi|218434289|emb|CAR15211.1| glycine tRNA synthetase, beta subunit [Escherichia coli UMN026] gi|284923591|emb|CBG36687.1| glycine-tRNA synthetase, beta subunit [Escherichia coli 042] gi|291425992|gb|EFE99026.1| glycyl-tRNA synthetase beta subunit [Escherichia coli FVEC1412] gi|298276766|gb|EFI18284.1| glycyl-tRNA synthetase beta subunit [Escherichia coli FVEC1302] gi|300357647|gb|EFJ73517.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 198-1] gi|323975029|gb|EGB70138.1| glycyl-tRNA synthetase beta subunit [Escherichia coli TW10509] gi|324007365|gb|EGB76584.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 57-2] gi|324111897|gb|EGC05877.1| glycyl-tRNA synthetase beta subunit [Escherichia fergusonii B253] gi|331057693|gb|EGI29679.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA143] gi|331067957|gb|EGI39355.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA280] Length = 689 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|170766599|ref|ZP_02901052.1| glycyl-tRNA synthetase, beta subunit [Escherichia albertii TW07627] gi|170124037|gb|EDS92968.1| glycyl-tRNA synthetase, beta subunit [Escherichia albertii TW07627] Length = 689 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 205/726 (28%), Positives = 337/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAQAQPDREIEKRGPAIAQAFDAEGNPTKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQADRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|165977240|ref|YP_001652833.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|238687522|sp|B0BSX5|SYGB_ACTPJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|165877341|gb|ABY70389.1| glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 689 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 344/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +RA Sbjct: 338 ------LKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVDDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + T + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISTEIDRSLLVEAEEKALAEQVISLQTELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDRLASLRETVDSFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|306816088|ref|ZP_07450226.1| glycyl-tRNA synthetase subunit beta [Escherichia coli NC101] gi|305850484|gb|EFM50941.1| glycyl-tRNA synthetase subunit beta [Escherichia coli NC101] Length = 689 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGNVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|331655194|ref|ZP_08356193.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli M718] gi|331047209|gb|EGI19287.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli M718] Length = 689 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEALSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|170682940|ref|YP_001745846.1| glycyl-tRNA synthetase subunit beta [Escherichia coli SMS-3-5] gi|218702324|ref|YP_002409953.1| glycyl-tRNA synthetase subunit beta [Escherichia coli IAI39] gi|226737052|sp|B7NP55|SYGB_ECO7I RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226737055|sp|B1LJC0|SYGB_ECOSM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|170520658|gb|ACB18836.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli SMS-3-5] gi|218372310|emb|CAR20175.1| glycine tRNA synthetase, beta subunit [Escherichia coli IAI39] Length = 689 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGESEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|300937166|ref|ZP_07152019.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 21-1] gi|300457752|gb|EFK21245.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 21-1] Length = 689 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 207/726 (28%), Positives = 339/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGESEFTIDNADQYPEILRERGRVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|325499117|gb|EGC96976.1| glycyl-tRNA synthetase subunit beta [Escherichia fergusonii ECD227] Length = 689 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 205/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RI++E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRILVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|320639879|gb|EFX09473.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. G5101] Length = 689 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 339/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + ++ KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAVANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|15833696|ref|NP_312469.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. Sakai] gi|26250200|ref|NP_756240.1| glycyl-tRNA synthetase subunit beta [Escherichia coli CFT073] gi|91213072|ref|YP_543058.1| glycyl-tRNA synthetase subunit beta [Escherichia coli UTI89] gi|110643806|ref|YP_671536.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 536] gi|117625841|ref|YP_859164.1| glycyl-tRNA synthetase subunit beta [Escherichia coli APEC O1] gi|168746896|ref|ZP_02771918.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4113] gi|168753378|ref|ZP_02778385.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4401] gi|168759650|ref|ZP_02784657.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4501] gi|168765973|ref|ZP_02790980.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4486] gi|168772480|ref|ZP_02797487.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4196] gi|168779709|ref|ZP_02804716.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4076] gi|168785430|ref|ZP_02810437.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC869] gi|168797396|ref|ZP_02822403.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC508] gi|191170372|ref|ZP_03031925.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli F11] gi|195935089|ref|ZP_03080471.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. EC4024] gi|208808060|ref|ZP_03250397.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4206] gi|208812785|ref|ZP_03254114.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4045] gi|208820866|ref|ZP_03261186.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4042] gi|209399717|ref|YP_002273044.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4115] gi|215488843|ref|YP_002331274.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O127:H6 str. E2348/69] gi|217326136|ref|ZP_03442220.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. TW14588] gi|218560634|ref|YP_002393547.1| glycyl-tRNA synthetase subunit beta [Escherichia coli S88] gi|218691848|ref|YP_002400060.1| glycyl-tRNA synthetase subunit beta [Escherichia coli ED1a] gi|227883725|ref|ZP_04001530.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 83972] gi|237703329|ref|ZP_04533810.1| glycyl-tRNA synthetase subunit beta [Escherichia sp. 3_2_53FAA] gi|254795515|ref|YP_003080352.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. TW14359] gi|261224877|ref|ZP_05939158.1| glycine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261254224|ref|ZP_05946757.1| glycine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. FRIK966] gi|291284935|ref|YP_003501753.1| Glycyl-tRNA synthetase beta subunit [Escherichia coli O55:H7 str. CB9615] gi|300971418|ref|ZP_07171453.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 45-1] gi|300976958|ref|ZP_07173693.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 200-1] gi|301047087|ref|ZP_07194188.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 185-1] gi|331649389|ref|ZP_08350475.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli M605] gi|54039662|sp|P67031|SYGB_ECO57 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|54042277|sp|P67030|SYGB_ECOL6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|123265949|sp|Q1R537|SYGB_ECOUT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|123343488|sp|Q0TBP4|SYGB_ECOL5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166227912|sp|A1AHA0|SYGB_ECOK1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226737051|sp|B7MER4|SYGB_ECO45 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238064849|sp|B5YVL1|SYGB_ECO5E RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781848|sp|B7ULB9|SYGB_ECO27 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781850|sp|B7N1L1|SYGB_ECO81 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|26110629|gb|AAN82814.1|AE016768_232 Glycyl-tRNA synthetase beta chain [Escherichia coli CFT073] gi|13363916|dbj|BAB37865.1| glycine tRNA synthetase beta subunit [Escherichia coli O157:H7 str. Sakai] gi|91074646|gb|ABE09527.1| glycine tRNA synthetase beta subunit [Escherichia coli UTI89] gi|110345398|gb|ABG71635.1| glycyl-tRNA synthetase beta chain [Escherichia coli 536] gi|115514965|gb|ABJ03040.1| glycyl-tRNA synthetase subunit beta [Escherichia coli APEC O1] gi|187771698|gb|EDU35542.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4196] gi|188018299|gb|EDU56421.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4113] gi|189002608|gb|EDU71594.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4076] gi|189359259|gb|EDU77678.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4401] gi|189364795|gb|EDU83214.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4486] gi|189369719|gb|EDU88135.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4501] gi|189374282|gb|EDU92698.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC869] gi|189380084|gb|EDU98500.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC508] gi|190909180|gb|EDV68766.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli F11] gi|208727861|gb|EDZ77462.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4206] gi|208734062|gb|EDZ82749.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4045] gi|208740989|gb|EDZ88671.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4042] gi|209161117|gb|ACI38550.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4115] gi|209755198|gb|ACI75911.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|209755200|gb|ACI75912.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|209755202|gb|ACI75913.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|209755204|gb|ACI75914.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|209755206|gb|ACI75915.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|215266915|emb|CAS11358.1| glycine tRNA synthetase, beta subunit [Escherichia coli O127:H6 str. E2348/69] gi|217322357|gb|EEC30781.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. TW14588] gi|218367403|emb|CAR05185.1| glycine tRNA synthetase, beta subunit [Escherichia coli S88] gi|218429412|emb|CAR10231.1| glycine tRNA synthetase, beta subunit [Escherichia coli ED1a] gi|226902593|gb|EEH88852.1| glycyl-tRNA synthetase subunit beta [Escherichia sp. 3_2_53FAA] gi|227839305|gb|EEJ49771.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 83972] gi|254594915|gb|ACT74276.1| glycine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. TW14359] gi|281180603|dbj|BAI56933.1| glycyl-tRNA synthetase beta subunit [Escherichia coli SE15] gi|290764808|gb|ADD58769.1| Glycyl-tRNA synthetase beta subunit [Escherichia coli O55:H7 str. CB9615] gi|294489492|gb|ADE88248.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli IHE3034] gi|300301004|gb|EFJ57389.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 185-1] gi|300308428|gb|EFJ62948.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 200-1] gi|300411252|gb|EFJ94790.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 45-1] gi|307555663|gb|ADN48438.1| glycine tRNA synthetase beta subunit [Escherichia coli ABU 83972] gi|307628640|gb|ADN72944.1| glycyl-tRNA synthetase subunit beta [Escherichia coli UM146] gi|315285316|gb|EFU44761.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 110-3] gi|315294114|gb|EFU53466.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 153-1] gi|315300121|gb|EFU59359.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 16-3] gi|320191385|gb|EFW66035.1| Glycyl-tRNA synthetase beta chain [Escherichia coli O157:H7 str. EC1212] gi|320645042|gb|EFX14066.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H- str. 493-89] gi|320650309|gb|EFX18792.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H- str. H 2687] gi|320655884|gb|EFX23807.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661664|gb|EFX29079.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O55:H7 str. USDA 5905] gi|320666688|gb|EFX33671.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. LSU-61] gi|323189399|gb|EFZ74681.1| glycyl-tRNA synthetase beta subunit [Escherichia coli RN587/1] gi|323949802|gb|EGB45686.1| glycyl-tRNA synthetase beta subunit [Escherichia coli H252] gi|323954897|gb|EGB50677.1| glycyl-tRNA synthetase beta subunit [Escherichia coli H263] gi|324014233|gb|EGB83452.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 60-1] gi|326337437|gb|EGD61272.1| Glycyl-tRNA synthetase beta chain [Escherichia coli O157:H7 str. 1044] gi|326339962|gb|EGD63769.1| Glycyl-tRNA synthetase beta chain [Escherichia coli O157:H7 str. 1125] gi|330909621|gb|EGH38135.1| glycyl-tRNA synthetase beta chain [Escherichia coli AA86] gi|331041887|gb|EGI14031.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli M605] Length = 689 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|331659874|ref|ZP_08360812.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA206] gi|331053089|gb|EGI25122.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA206] Length = 689 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGESEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|293417006|ref|ZP_06659643.1| glycyl-tRNA synthetase [Escherichia coli B185] gi|291431582|gb|EFF04567.1| glycyl-tRNA synthetase [Escherichia coli B185] Length = 689 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEHIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|320193929|gb|EFW68562.1| Glycyl-tRNA synthetase beta chain [Escherichia coli WV_060327] Length = 689 Score = 635 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|188493970|ref|ZP_03001240.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 53638] gi|188489169|gb|EDU64272.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 53638] Length = 689 Score = 635 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVAMNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|222035273|emb|CAP78018.1| glycyl-tRNA synthetase beta chain [Escherichia coli LF82] gi|312948124|gb|ADR28951.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O83:H1 str. NRG 857C] Length = 689 Score = 635 bits (1637), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGESEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|300920443|ref|ZP_07136877.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 115-1] gi|300412576|gb|EFJ95886.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 115-1] Length = 689 Score = 635 bits (1637), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|319899206|ref|YP_004159299.1| glycyl-tRNA synthetase beta chain [Bartonella clarridgeiae 73] gi|319403170|emb|CBI76729.1| glycyl-tRNA synthetase beta chain [Bartonella clarridgeiae 73] Length = 742 Score = 635 bits (1637), Expect = e-179, Method: Composition-based stats. Identities = 335/738 (45%), Positives = 451/738 (61%), Gaps = 37/738 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPA MQ +AA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MPDLLLELFSEEIPAHMQRRAASDLKKCVTDKLVNAGLSYKAACEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GP + ++ ID FLR+TGL IS I D KKGD Y+A K RL Sbjct: 61 KSSPDVHEERKGPNAQSPQQVIDAFLRTTGLNDISKVHITHDDKKGDFYIAKTTKKGRLA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PW KSMRW + A WIR L++ILC+ + + II + Sbjct: 121 EEIIADILPDIIRNFPWQKSMRWGQESAKSGALRWIRSLQNILCVFGSAIGETHIIPFTV 180 Query: 181 KEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + I+V+ D Y+ LE V+LD E R++ IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSNGKSIQVRRFDDYVTQLENHKVILDAERRKDIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELVEDK LLEE+ GLVEW V M +FDK +L +P E+IRLTI+T+QKCFVTR R + Sbjct: 241 GLELVEDKALLEEVAGLVEWPVVLMSTFDKTFLNIPPEIIRLTIQTHQKCFVTRKRGDKS 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILV+NI A+D G I +GNS+VV ARL DAL+FW+ DQ NLPN++ L+ SA K Sbjct: 301 KLSNYFILVANILANDKGIEISKGNSKVVNARLSDALYFWQTDQCNLPNITHLESSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A+L+ L+V FHAK+GTQG +V RI L + IA L+ AD L RA +L Sbjct: 361 DLDLNKPLDQRIAQLNYLNVTFHAKLGTQGAKVERIAALTQIIAPLVKADSILAKRAAIL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEIV EFPELQG IG++YA+LQ E+ +AIE+H KP GP + +P I+ITV Sbjct: 421 AKADLQTEIVGEFPELQGLIGRKYALLQGEDPRVAEAIEDHYKPLGPKDRIPCEPIAITV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----- 532 +LADK+DTLI FW INEKP+ SKDPYALRRA LG+IR++L N I L Sbjct: 481 ALADKIDTLIGFWFINEKPTSSKDPYALRRAALGVIRLMLLNDWKISLMPLFHQAMNFLL 540 Query: 533 -----------------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +L+ FFH+RLK YL D RHD+IEA+L + Sbjct: 541 QQKIQYATSETEATQLQNISVEKTENIVLDLLTFFHERLKGYLKDEGARHDIIEAVLTKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +D++L I ++ L F ++ G L++ KR IL E KK I ++ P+ + Sbjct: 601 SDDILLIARRVEALTFFINTNDGNSLLIAVKRAINILENETKKGTTIINKVRPELFIETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY + I + + L + +PI FF++V VN + +R NRL+ Sbjct: 661 EKQLYQTTIETEKKIADHIHVTELSSTLSSLLLLKKPINEFFEKVFVNDGNINIRTNRLA 720 Query: 684 LLQYIKNIILIVINVQKI 701 LL+ I+ + V + K+ Sbjct: 721 LLERIRIVTQNVADFSKL 738 >gi|310816494|ref|YP_003964458.1| glycyl-tRNA synthetase, beta subunit [Ketogulonicigenium vulgare Y25] gi|308755229|gb|ADO43158.1| glycyl-tRNA synthetase, beta subunit [Ketogulonicigenium vulgare Y25] Length = 690 Score = 635 bits (1637), Expect = e-179, Method: Composition-based stats. Identities = 273/723 (37%), Positives = 395/723 (54%), Gaps = 55/723 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ +AA+DL ++ L E G+ Y+ + TP RL L L GL+ Sbjct: 1 MADLLIELFSEEIPARMQTRAADDLRRLVTDGLVEAGLTYEGAGAFSTPRRLVLTLSGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPR A + A+ GFLR+TGL +GD Y AV KP R Sbjct: 61 AQSRAVREERKGPRTNAPEAALQGFLRATGLTVDQL------DVRGDTYFAVTEKPGRAA 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ A++ PWPKSMRW + + W+RPL SI+C+L ++++ +D+ Sbjct: 115 PEIIAEVLTSAVRNFPWPKSMRWGSGN-----LRWVRPLHSIICLL-----DDQVVPVDI 164 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP I V Y L+ A V+L + R + I DA A A G Sbjct: 165 DGIVAGNTTRGHRFMAPGVITVTGFADYEEKLQAARVMLRADQRADTIWTDATNAAFAKG 224 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG + +L LP E+++ +++ +QK F R Sbjct: 225 LEVVEDKGLLAEVAGLVEWPVVLMGPIGEAFLGLPPEVLQTSMREHQKFFSLRNPATGRI 284 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+NI +D GA I+QGN +V+AARL DA FW+ D + Sbjct: 285 EAFITVANILTADDGATILQGNGKVLAARLSDARFFWENDLRTVSRAG------------ 332 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ A L +V FH ++G+Q +R++RI + + +A + AD A + KA Sbjct: 333 ----LEGMAAGL--ANVTFHNRLGSQTDRIARIEAMARALAPVTGADADEAALAARVVKA 386 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G YA + + +A + H +P GP + VP +S TV+LA Sbjct: 387 DLRSEMVGEFPELQGTMGGYYARAAGLSDAVANACKGHYQPLGPDDAVPHEAVSATVALA 446 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ------------- 527 DKLDTL FWA++EKP+GSKDP+ALRRA LG+IR++L N + +PL Sbjct: 447 DKLDTLTGFWAMDEKPTGSKDPFALRRAALGVIRLVLGNGLRLPLRDTLAAPLAANFAAS 506 Query: 528 ------FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEF 580 +NL+ FFHDRLK++L D + HD+I+A L P ND+L +V + L F Sbjct: 507 GTAGETAPVAENLLGFFHDRLKVFLKDEGLSHDVIDACLAMPGNDDLDLLVRRARALQAF 566 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + GE + KR IL E K+ E S P + E E+ L+A ++ I Sbjct: 567 LKTDDGENLVQGFKRANNILTQAEAKDGVEYSFGADPAFAEDEVERALFAALTRAEGQIT 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + + ++ PI+ FF V VN ++ VR NRL+LL I+ I L V ++ Sbjct: 627 PAIAAEDFAGAMAAMAALRAPIDAFFAGVQVNAENAIVRRNRLNLLGQIRTICLQVADLS 686 Query: 700 KIV 702 ++V Sbjct: 687 RLV 689 >gi|303250056|ref|ZP_07336258.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253488|ref|ZP_07535359.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302651119|gb|EFL81273.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859167|gb|EFM91209.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 689 Score = 635 bits (1637), Expect = e-179, Method: Composition-based stats. Identities = 208/720 (28%), Positives = 346/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +RA Sbjct: 338 ------LKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRR+ LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRSALGSLRIIVEKNLPLDLEDLVRKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGNKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS+EI L+ EK L + T + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISIEIDRTLLVEAEEKALAEQVISLQTELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDHLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|301020273|ref|ZP_07184391.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 69-1] gi|300398850|gb|EFJ82388.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 69-1] Length = 689 Score = 634 bits (1636), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLSHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPAVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|323966028|gb|EGB61469.1| glycyl-tRNA synthetase beta subunit [Escherichia coli M863] gi|327251210|gb|EGE62903.1| glycyl-tRNA synthetase beta subunit [Escherichia coli STEC_7v] Length = 689 Score = 634 bits (1636), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESQD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|307257903|ref|ZP_07539658.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863590|gb|EFM95518.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 689 Score = 634 bits (1636), Expect = e-179, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 344/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKEIEKRGPAVSAAFDADGKPTKAAEGWARGCGITVDQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVELPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +RA Sbjct: 338 ------LKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLSLDLEDLVRKSAV 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + T + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISTEIDCTLLVEAEEKALAEQVISLQTELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|323179478|gb|EFZ65045.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 1180] Length = 689 Score = 634 bits (1636), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 339/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPSMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|16131430|ref|NP_418016.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. MG1655] gi|89110454|ref|AP_004234.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. W3110] gi|157163035|ref|YP_001460353.1| glycyl-tRNA synthetase subunit beta [Escherichia coli HS] gi|170018211|ref|YP_001723165.1| glycyl-tRNA synthetase subunit beta [Escherichia coli ATCC 8739] gi|170083068|ref|YP_001732388.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. DH10B] gi|194435847|ref|ZP_03067950.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 101-1] gi|238902648|ref|YP_002928444.1| glycine tRNA synthetase, beta subunit [Escherichia coli BW2952] gi|253771606|ref|YP_003034437.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038744|ref|ZP_04872800.1| glycyl-tRNA synthetase beta subunit [Escherichia sp. 1_1_43] gi|254163483|ref|YP_003046591.1| glycyl-tRNA synthetase subunit beta [Escherichia coli B str. REL606] gi|256025713|ref|ZP_05439578.1| glycyl-tRNA synthetase subunit beta [Escherichia sp. 4_1_40B] gi|300930911|ref|ZP_07146276.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 187-1] gi|300950351|ref|ZP_07164281.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 116-1] gi|301028172|ref|ZP_07191443.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 196-1] gi|301646007|ref|ZP_07245913.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 146-1] gi|307140250|ref|ZP_07499606.1| glycyl-tRNA synthetase subunit beta [Escherichia coli H736] gi|312972165|ref|ZP_07786339.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 1827-70] gi|331644271|ref|ZP_08345400.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H736] gi|586056|sp|P00961|SYGB_ECOLI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166980038|sp|A8A616|SYGB_ECOHS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|189082267|sp|B1IZN4|SYGB_ECOLC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229470697|sp|B1X8H5|SYGB_ECODH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|259511923|sp|C4ZXE9|SYGB_ECOBW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|466697|gb|AAB18536.1| glycine-tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. MG1655] gi|1789982|gb|AAC76583.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. MG1655] gi|85676485|dbj|BAE77735.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K12 substr. W3110] gi|157068715|gb|ABV07970.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli HS] gi|169753139|gb|ACA75838.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli ATCC 8739] gi|169890903|gb|ACB04610.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. DH10B] gi|194425390|gb|EDX41374.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 101-1] gi|226839250|gb|EEH71273.1| glycyl-tRNA synthetase beta subunit [Escherichia sp. 1_1_43] gi|238861373|gb|ACR63371.1| glycine tRNA synthetase, beta subunit [Escherichia coli BW2952] gi|242379077|emb|CAQ33878.1| glycyl-tRNA synthetase, beta subunit, subunit of glycyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|253322650|gb|ACT27252.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975384|gb|ACT41055.1| glycyl-tRNA synthetase subunit beta [Escherichia coli B str. REL606] gi|253979540|gb|ACT45210.1| glycyl-tRNA synthetase subunit beta [Escherichia coli BL21(DE3)] gi|260447424|gb|ACX37846.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli DH1] gi|299878749|gb|EFI86960.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 196-1] gi|300450317|gb|EFK13937.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 116-1] gi|300461230|gb|EFK24723.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 187-1] gi|301075759|gb|EFK90565.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 146-1] gi|310334542|gb|EFQ00747.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 1827-70] gi|315138136|dbj|BAJ45295.1| glycyl-tRNA synthetase subunit beta [Escherichia coli DH1] gi|315618402|gb|EFU98989.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 3431] gi|323934887|gb|EGB31269.1| glycyl-tRNA synthetase beta [Escherichia coli E1520] gi|323939541|gb|EGB35749.1| glycyl-tRNA synthetase beta subunit [Escherichia coli E482] gi|323959375|gb|EGB55035.1| glycyl-tRNA synthetase beta subunit [Escherichia coli H489] gi|323971318|gb|EGB66560.1| glycyl-tRNA synthetase beta subunit [Escherichia coli TA007] gi|331036565|gb|EGI08791.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H736] gi|332345527|gb|AEE58861.1| glycyl-tRNA synthetase beta subunit GlyS [Escherichia coli UMNK88] Length = 689 Score = 634 bits (1635), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|74314188|ref|YP_312607.1| glycyl-tRNA synthetase subunit beta [Shigella sonnei Ss046] gi|157156177|ref|YP_001465034.1| glycyl-tRNA synthetase subunit beta [Escherichia coli E24377A] gi|218697274|ref|YP_002404941.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 55989] gi|256020906|ref|ZP_05434771.1| glycyl-tRNA synthetase subunit beta [Shigella sp. D9] gi|293453868|ref|ZP_06664287.1| glycyl-tRNA synthetase [Escherichia coli B088] gi|300925635|ref|ZP_07141500.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 182-1] gi|307314647|ref|ZP_07594247.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli W] gi|332282126|ref|ZP_08394539.1| glycyl-tRNA synthetase subunit beta [Shigella sp. D9] gi|123759516|sp|Q3YVU0|SYGB_SHISS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166980037|sp|A7ZTA5|SYGB_ECO24 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781849|sp|B7L6X3|SYGB_ECO55 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|73857665|gb|AAZ90372.1| glycine tRNA synthetase, beta subunit [Shigella sonnei Ss046] gi|157078207|gb|ABV17915.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E24377A] gi|218354006|emb|CAV00497.1| glycine tRNA synthetase, beta subunit [Escherichia coli 55989] gi|291321994|gb|EFE61425.1| glycyl-tRNA synthetase [Escherichia coli B088] gi|300418253|gb|EFK01564.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 182-1] gi|306905860|gb|EFN36384.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli W] gi|315062845|gb|ADT77172.1| glycine tRNA synthetase, beta subunit [Escherichia coli W] gi|323166949|gb|EFZ52688.1| glycyl-tRNA synthetase beta subunit [Shigella sonnei 53G] gi|323174217|gb|EFZ59845.1| glycyl-tRNA synthetase beta subunit [Escherichia coli LT-68] gi|323182714|gb|EFZ68116.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 1357] gi|323376564|gb|ADX48832.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli KO11] gi|324116562|gb|EGC10479.1| glycyl-tRNA synthetase beta subunit [Escherichia coli E1167] gi|332104478|gb|EGJ07824.1| glycyl-tRNA synthetase subunit beta [Shigella sp. D9] Length = 689 Score = 634 bits (1635), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|24114835|ref|NP_709345.1| glycyl-tRNA synthetase subunit beta [Shigella flexneri 2a str. 301] gi|30065154|ref|NP_839325.1| glycyl-tRNA synthetase subunit beta [Shigella flexneri 2a str. 2457T] gi|110807772|ref|YP_691292.1| glycyl-tRNA synthetase subunit beta [Shigella flexneri 5 str. 8401] gi|191165233|ref|ZP_03027076.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli B7A] gi|193061668|ref|ZP_03042765.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E22] gi|194427395|ref|ZP_03059944.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli B171] gi|209921023|ref|YP_002295107.1| glycyl-tRNA synthetase subunit beta [Escherichia coli SE11] gi|260846727|ref|YP_003224505.1| glycine tRNA synthetase, beta subunit [Escherichia coli O103:H2 str. 12009] gi|260858046|ref|YP_003231937.1| glycine tRNA synthetase, beta subunit [Escherichia coli O26:H11 str. 11368] gi|260870289|ref|YP_003236691.1| glycine tRNA synthetase, beta subunit [Escherichia coli O111:H- str. 11128] gi|300815213|ref|ZP_07095438.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 107-1] gi|300822039|ref|ZP_07102182.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 119-7] gi|300902750|ref|ZP_07120705.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 84-1] gi|301304611|ref|ZP_07210720.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 124-1] gi|309797584|ref|ZP_07691973.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 145-7] gi|331670392|ref|ZP_08371231.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA271] gi|331679639|ref|ZP_08380309.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H591] gi|81839217|sp|Q83J38|SYGB_SHIFL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|123146479|sp|Q0SY78|SYGB_SHIF8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238064850|sp|B6I3C9|SYGB_ECOSE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|24054068|gb|AAN45052.1| glycine tRNA synthetase, beta subunit [Shigella flexneri 2a str. 301] gi|30043415|gb|AAP19136.1| glycine tRNA synthetase, beta subunit [Shigella flexneri 2a str. 2457T] gi|110617320|gb|ABF05987.1| glycine tRNA synthetase, beta subunit [Shigella flexneri 5 str. 8401] gi|190904635|gb|EDV64341.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli B7A] gi|192932458|gb|EDV85055.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E22] gi|194414435|gb|EDX30708.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli B171] gi|209914282|dbj|BAG79356.1| glycyl-tRNA synthase beta subunit [Escherichia coli SE11] gi|257756695|dbj|BAI28197.1| glycine tRNA synthetase, beta subunit [Escherichia coli O26:H11 str. 11368] gi|257761874|dbj|BAI33371.1| glycine tRNA synthetase, beta subunit [Escherichia coli O103:H2 str. 12009] gi|257766645|dbj|BAI38140.1| glycine tRNA synthetase, beta subunit [Escherichia coli O111:H- str. 11128] gi|281602927|gb|ADA75911.1| Glycyl-tRNA synthetase beta subunit [Shigella flexneri 2002017] gi|300405178|gb|EFJ88716.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 84-1] gi|300525402|gb|EFK46471.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 119-7] gi|300532105|gb|EFK53167.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 107-1] gi|300840089|gb|EFK67849.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 124-1] gi|308118854|gb|EFO56116.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 145-7] gi|315254088|gb|EFU34056.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 85-1] gi|320201420|gb|EFW76001.1| Glycyl-tRNA synthetase beta chain [Escherichia coli EC4100B] gi|323153887|gb|EFZ40121.1| glycyl-tRNA synthetase beta subunit [Escherichia coli EPECa14] gi|323160673|gb|EFZ46612.1| glycyl-tRNA synthetase beta subunit [Escherichia coli E128010] gi|323944544|gb|EGB40615.1| glycyl-tRNA synthetase beta [Escherichia coli H120] gi|324017914|gb|EGB87133.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 117-3] gi|331062454|gb|EGI34374.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA271] gi|331072811|gb|EGI44136.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H591] gi|332749993|gb|EGJ80405.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-671] gi|332750151|gb|EGJ80562.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri 4343-70] gi|332751419|gb|EGJ81822.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri 2747-71] gi|332764240|gb|EGJ94477.1| glycyl-tRNA synthetase, &beta subunit [Shigella flexneri 2930-71] gi|332996373|gb|EGK16000.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri VA-6] gi|332996921|gb|EGK16540.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-272] gi|332997029|gb|EGK16645.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-218] gi|333012812|gb|EGK32189.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-304] gi|333013392|gb|EGK32764.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-227] Length = 689 Score = 634 bits (1635), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|237728873|ref|ZP_04559354.1| glycyl-tRNA synthetase subunit beta [Citrobacter sp. 30_2] gi|226909495|gb|EEH95413.1| glycyl-tRNA synthetase subunit beta [Citrobacter sp. 30_2] Length = 689 Score = 634 bits (1635), Expect = e-179, Method: Composition-based stats. Identities = 205/726 (28%), Positives = 336/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGIAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAETLLPNMIATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + S D Y L V+ D R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDSADQYPEILRERGKVIADYAERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVHTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDPIQ-IISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K ++ ++ L E L + Sbjct: 566 AVSHFRTLEAASALAAANKRVSNILA---KSEETLNDRVNAATLKEPEEIALAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + EP++ FF++V+VNV+D+++R NRLS+L+ ++ + L V Sbjct: 623 DKLEPVFAAGRYQEALVELAELREPVDAFFEKVMVNVEDKDLRINRLSMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|327395920|dbj|BAK13342.1| glycyl-tRNA synthetase beta chain GlyS [Pantoea ananatis AJ13355] Length = 689 Score = 633 bits (1634), Expect = e-179, Method: Composition-based stats. Identities = 203/726 (27%), Positives = 339/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + + L + + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAEAFAAQVTAELDAANLNHGEVSWFAAPRRLALKIAS 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP V G KA +G+ R G+ ++ KG+ + Sbjct: 61 LSASQPDREVEKRGPAVAAAFDAEGNATKAAEGWARGNGITVEQAERL--STDKGEWLVY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAQVKGEAAQALLPGMVATALSKLPVPKLMRWGDSD-----VQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 +++I + I + GHRF I +++ D Y LE+ V+ D + R+ I Sbjct: 169 GDELIPATILGIKSDRVIRGHRFMGESEITLENADQYPDVLEKRGQVIADYQVRKAMIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAARRLGGVADLSDSLLEEVTSLVEWPVVLTATFEEKFLKVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 EG L FI V+NI++SD I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDAEGNLLPNFIFVTNIESSD-PQQIISGNEKVVRPRLADAEFFFDTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++G+ ++ RI+ L +A I ADV Sbjct: 339 -----------KKRLEDHLPRLET--VLFQKELGSLRDKTDRIQALAGWVAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 SPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D ++A+L +K Sbjct: 506 EAVRLYGSKLSNANAVNDVIDFMLGRFRSWYQEEGHSIDTLQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLDEAAALAAANKRVSNILA---KSTEPLNDSVQASLLKENEEIQLATFVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + E ++ FFD+V+VN +D VR NRL+LL ++ + L V Sbjct: 623 SKLQPYFAEGRYQDALIELAQLREAVDNFFDKVMVNAEDEAVRINRLTLLSKLRGLFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|323139039|ref|ZP_08074098.1| glycyl-tRNA synthetase, beta subunit [Methylocystis sp. ATCC 49242] gi|322395699|gb|EFX98241.1| glycyl-tRNA synthetase, beta subunit [Methylocystis sp. ATCC 49242] Length = 725 Score = 633 bits (1634), Expect = e-179, Method: Composition-based stats. Identities = 306/716 (42%), Positives = 412/716 (57%), Gaps = 63/716 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA+DL ++ L E G+ Y+ Y TP RL L + GL Sbjct: 1 MPDLLLELFSEEIPARMQRQAADDLRRLVTNALVERGLTYEGASAYATPRRLALQVVGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EER GPRVGA AI GFL+S GL ++ +I+KD K + YLAV+ +P Sbjct: 61 GRQPDVREERKGPRVGAPDAAIQGFLKSAGLASLDQARIEKDKKGAEFYLAVIERPGAET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 VL I+P ++ PWPKSMRW + W+RPL SI+ E ++ ++ Sbjct: 121 IQVLAEILPGIVKGFPWPKSMRWGAASERTDSLRWVRPLHSIVATFGPETETPDVVPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T+GHRF AP I V+ + Y LE A V++DPE RR+ IL+DA LA A G Sbjct: 181 DGIIAGNTTHGHRFMAPAAIHVKRFEDYAMSLERARVVIDPERRRDIILHDAKDLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED LLEE+ GLVEW MGSFD+ +L +P E+IR TI+ NQKCFV R ++G L Sbjct: 241 LELVEDAGLLEEVAGLVEWPVTLMGSFDESFLSIPPEVIRATIRVNQKCFVLR-KDGKLT 299 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILVSNI+ASD GA IV GN RV+AARL DA F++ D Sbjct: 300 NRFILVSNIEASDHGATIVAGNQRVIAARLSDAKFFYETD-------------------- 339 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L L+ R+ +LD +VFH K+GTQGERV RI L +++A ++ AD RA L KA Sbjct: 340 LKTKLEDRLPKLDQ--IVFHEKLGTQGERVKRIAALARELAPIVGADPDKAARAATLCKA 397 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G YA Q E+ S +A EH KP+G + P + +SI V+LA Sbjct: 398 DLVSEMVGEFPELQGLMGSYYASAQGEDPSVANACYEHYKPQGQGDYAPKDPVSIAVALA 457 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 DKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRIILEN++ + + Q Sbjct: 458 DKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIILENELRLQALPIFDCQYNVFSFHG 517 Query: 533 ----------------NLILFFHDRLKLYLHDRDIRHDLIEAIL--------------RP 562 +L+ FF DRLK+YL D+ R+DLI+A L Sbjct: 518 KTLKETSEGMVGTSAISLLEFFIDRLKVYLRDKGARYDLIDAALGAVAFDESEEETASAA 577 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL--EISPQYLL 620 D+LL I ++ L++F ++ G+ L KR IL EEKK+ + +P + Sbjct: 578 LQDDLLMITKKVEALDKFLATDDGKNLLAGYKRAVNILKAEEKKDGPRAYYHRHAPNLRV 637 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 E +L A I+ E ++ + + L + +P++ FF+ V VN D+ + Sbjct: 638 EPQEHKLAAAIARAREETTEKLEKEDFAGAMRSLAKLRDPVDAFFEHVTVNADNAD 693 >gi|218556118|ref|YP_002389031.1| glycyl-tRNA synthetase subunit beta [Escherichia coli IAI1] gi|226737053|sp|B7M3I1|SYGB_ECO8A RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218362886|emb|CAR00520.1| glycine tRNA synthetase, beta subunit [Escherichia coli IAI1] Length = 689 Score = 633 bits (1634), Expect = e-179, Method: Composition-based stats. Identities = 207/726 (28%), Positives = 339/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTSD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|260563481|ref|ZP_05833967.1| glycyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|265990534|ref|ZP_06103091.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|265999600|ref|ZP_05467081.2| glycyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|260153497|gb|EEW88589.1| glycyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|263001318|gb|EEZ13893.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|263094883|gb|EEZ18621.1| glycyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|326408438|gb|ADZ65503.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis M28] gi|326538154|gb|ADZ86369.1| glycyl-tRNA synthetase, beta subunit [Brucella melitensis M5-90] Length = 761 Score = 633 bits (1634), Expect = e-179, Method: Composition-based stats. Identities = 335/759 (44%), Positives = 442/759 (58%), Gaps = 74/759 (9%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVG 76 MQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ S + E+ GP V Sbjct: 1 MQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLTVRSKDVHEDIKGPSVS 60 Query: 77 AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVP 136 A ++AI GFLR GL +S + DPKKGD Y+A L KP R ED++ +VP I+ P Sbjct: 61 APEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAAEDIVAELVPQTIRNFP 120 Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 WPKSMRW + A W+RPL+SILC E + K+ID D+ I GN+TYGHRF + Sbjct: 121 WPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDVDGIKSGNVTYGHRFLS 180 Query: 197 PH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIG 255 IKV+ + Y+ LE+A V+LD E R+ I DAH LA A GLELVED LLEE+ G Sbjct: 181 DGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFASGLELVEDDGLLEEVSG 240 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV---------------LA 300 LVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + L+ Sbjct: 241 LVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDASRLASPAPQHEEIQALS 300 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF LD Sbjct: 301 NKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGLD 360 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+KA Sbjct: 361 LKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAKA 420 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+LA Sbjct: 421 DLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVALA 480 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------- 529 DKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + PL Sbjct: 481 DKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEGQ 540 Query: 530 EDQNLILF-----------------FHDRLKLYLHD------------------------ 548 + L F + L Y + Sbjct: 541 MQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDRF 600 Query: 549 ------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 R+D I+A+L PE DNLL + ++ L F + G+ L AKR ILA Sbjct: 601 KVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILAA 660 Query: 603 EEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIE 662 EEKK +++ + P L EK L+ ++ + E++ + ++ L + P++ Sbjct: 661 EEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPVD 720 Query: 663 IFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 IFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 759 >gi|88801020|ref|ZP_01116569.1| Glycyl-tRNA synthetase, beta subunit [Reinekea sp. MED297] gi|88776223|gb|EAR07449.1| Glycyl-tRNA synthetase, beta subunit [Reinekea sp. MED297] Length = 681 Score = 633 bits (1634), Expect = e-179, Method: Composition-based stats. Identities = 204/714 (28%), Positives = 358/714 (50%), Gaps = 54/714 (7%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ +EE+P + + +I L++ G+ +++ ++ P RL L LK L Sbjct: 4 ADFLIELGTEELPPKALRMLKNAFAEGIIERLQKAGLSFEDSERFAAPRRLALTLKNLEL 63 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 P++ +ER GP A +AI+GF +S G+ + +++ D KG + KP + Sbjct: 64 KQPDEEQERKGPNAKAPAQAIEGFAKSCGVTVVDLEELETD--KGTWLVYRGVKPGKPTA 121 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 ++L IV + +P PK MRW ++RP+K +L +L ++++ ++ Sbjct: 122 ELLPEIVQQTLDALPIPKRMRWGARRD-----EFVRPVKWLLMLL-----GDEVVPAEIY 171 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVG 240 + GN++ GHRFHAP I + S Y L E V+ R I + ++A+ G Sbjct: 172 GVSSGNLSRGHRFHAPKDIAITSASAYQETLRAEGKVMASYGERHKLIEAEVKKVAAEKG 231 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 + V D DLL+E+ L EW +G F++++L +P E + +++ +QK F T EG + Sbjct: 232 VVPVIDADLLDEVTALNEWPVALVGQFEERFLEVPAEALMSSMEEHQKYFPTVDAEGNIQ 291 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI ++NI++ D +++GN +V+ RL DA FW+ D+ Sbjct: 292 PYFIFIANIESKD-PQVVIEGNEKVIRPRLSDAAFFWETDK------------------- 331 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L R+A L V F ++G+ ++V RI+ + IA IDA V+ +RA L+KA Sbjct: 332 -KTKLADRVASLKT--VKFQEQLGSVFDKVERIQKIAGHIAGQIDASVSEAERAAYLAKA 388 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T++V EF +LQG G+ YA+ E + +AI E KP G + +P ++ + V+LA Sbjct: 389 DLVTDMVFEFTDLQGIAGRYYALADGEPEAVAEAILEQYKPAGAGDALPESREGMAVALA 448 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 D+LD L + I + P+G+KDP+ALRRA LG++RI++E ++D+ L+ + Sbjct: 449 DRLDNLSGLFGIGQPPTGTKDPFALRRAALGVLRIVVERELDLDLADLVAFAADQHNKLP 508 Query: 532 ------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 +++ + DR + D IR ++ +A+ I ++ + EF + Sbjct: 509 KRDAVVNDVVHYALDRFSAWYADEGIRTEVFQAVRALNLTKPYDIDLRVRAVAEFSKLDQ 568 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E + KR+ L+ K +I EI E L + + ++ Sbjct: 569 AEALAAANKRVSNFLS---KVEGDIPTEIDVARFEESVEGDLLKALDGVEAKVSAAVQSS 625 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L ++ + ++ FFD+V+V DD VR+NRL+LL ++ + + V ++ Sbjct: 626 DYRTALNELSTLRDAVDAFFDKVMVMADDDNVRNNRLALLSKLRGLFVQVADIS 679 >gi|309703962|emb|CBJ03305.1| glycine-tRNA synthetase, beta subunit [Escherichia coli ETEC H10407] Length = 689 Score = 633 bits (1634), Expect = e-179, Method: Composition-based stats. Identities = 205/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 DPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|194431308|ref|ZP_03063601.1| glycyl-tRNA synthetase, beta subunit [Shigella dysenteriae 1012] gi|194420763|gb|EDX36839.1| glycyl-tRNA synthetase, beta subunit [Shigella dysenteriae 1012] gi|320182075|gb|EFW56980.1| Glycyl-tRNA synthetase beta chain [Shigella boydii ATCC 9905] gi|332085078|gb|EGI90258.1| glycyl-tRNA synthetase beta subunit [Shigella boydii 5216-82] gi|332085634|gb|EGI90798.1| glycyl-tRNA synthetase beta subunit [Shigella dysenteriae 155-74] Length = 689 Score = 633 bits (1634), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 339/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL + V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQI--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|114319177|ref|YP_740860.1| glycine--tRNA ligase [Alkalilimnicola ehrlichii MLHE-1] gi|114225571|gb|ABI55370.1| glycyl-tRNA synthetase beta chain [Alkalilimnicola ehrlichii MLHE-1] Length = 693 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 218/728 (29%), Positives = 350/728 (48%), Gaps = 65/728 (8%) Query: 1 MPD----FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYL 56 M + L+EI +EE+P + ++ L++ + + + Y TP RL L + Sbjct: 1 MAESTRTLLIEIGTEELPPVALPRLEAAFRDGVVQGLEQAELGHGPVHSYATPRRLALQV 60 Query: 57 KGLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY 109 + L +K ER GP + G KA +GF RS G +++ KG Sbjct: 61 EALQARQEDKAIERRGPALNVAFDDHGRPTKAAEGFARSCGATVEQLERLE--TPKGTWL 118 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 +P R ++L IV ++ ++P PK MRW + + ++RP+ I+ +L A+ Sbjct: 119 AWRGVQPGRAATELLPDIVNQSLSRLPIPKRMRWGSGQAT-----FVRPVHWIVFLLGAD 173 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAI 228 ++ L ++ G T GHRFHAP PI++ S D Y L E V E RR I Sbjct: 174 -----VVPATLMDVTSGRTTRGHRFHAPEPIELASADDYAERLRGEGRVEASFEARRERI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 RLA + D+ LL+E+ LVEW +GSFD +L +PEE + +++ +QK Sbjct: 229 RRGVLRLAEQEQGVAIMDEGLLDEVTALVEWPVPLVGSFDPGFLEVPEEALISSMQGHQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F R ++G L FI V+NI++ D + GN RV+ RL DA FW++D+ Sbjct: 289 YFPVRGQDGQLLPLFITVANIESRD-PDQVRSGNERVIRPRLADADFFWQQDR------- 340 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 +PL R+A L V+F ++GT ++ R+ L +++A +D D Sbjct: 341 -------------KRPLIDRLADLK--GVIFQKQLGTLYDKTQRVAHLAEQLAVEMDHDP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A V RA L++ DL TE+V EFPELQG +G+ YA+ E + DAI EH +PR E + Sbjct: 386 APVARAAWLARCDLGTEMVGEFPELQGIMGRYYALHDGEPKAVADAILEHYRPRYAGEAI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P +++A++ DTL +AI P+G KDP+ALRRA LG++R ++E ++ + L Sbjct: 446 PATPAGRLLAIAERADTLAGIFAIGLAPTGDKDPFALRRAALGLMRTLIEGELPLDLEGL 505 Query: 529 IED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + + F +RL+ Y ++ I +L EA+L L Sbjct: 506 LGRAAVLLPEGIAGRSIAEEVYDFCLERLRGYYQEQGIGAELFEAVLAVRPRCPLDFHRR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + F + E + KRI IL K + ++ L AE+ L + Sbjct: 566 LLACRRFAGLPEAEALAAANKRIGNILR---KAGETVPDTVASAQLKEPAEQALARSLEA 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q + Y + L + EP++ FFD +LV +D VR NRL+LL+ I+ + L Sbjct: 623 TREQLQPRLAEGDYAGALEGLARLREPVDTFFDDILVMAEDPGVRVNRLALLKAIQALFL 682 Query: 694 IVINVQKI 701 + +V ++ Sbjct: 683 EIADVSRL 690 >gi|307133195|ref|YP_003885211.1| glycine tRNA synthetase, subunit beta [Dickeya dadantii 3937] gi|306530724|gb|ADN00655.1| glycine tRNA synthetase, beta subunit [Dickeya dadantii 3937] Length = 689 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 209/724 (28%), Positives = 340/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L G+ YQ++ + P RL L + G Sbjct: 1 MTDKTFLVEIGTEELPPKALRTLAESFAANFTAELDAAGLGYQSVNWFAAPRRLALKVAG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LSASQPDREVEKRGPAIAQAFDAEGKPTKAAEGWARGCGITVDQAERL--TTDKGEWLLF 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L +V A+ K+P PK M W + ++RP+ ++ +L Sbjct: 119 RAQVKGEAAQALLPGMVSTALAKLPIPKLMHWGDKET-----QFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 ++++ + I GHRF + + D Y + LE VL D E R+ I Sbjct: 169 GDELVPGTVLGIDSARTIRGHRFMGEPEFTIDNADQYPQILLERGKVLADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEDAARNIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNSGKLMPNFIFVANIESKD-PQQIIAGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI L +A+ I ADV Sbjct: 339 -----------KKRLEDHLPRLET--VLFQQQLGTLRDKTDRIAALAGWVAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA +E A+ E +PR +++P+ Sbjct: 386 AKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDSEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG +RII+E ++ + L E Sbjct: 446 SPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGALRIIVEKRLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGDKLTNVNVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + E + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEQAEALAAANKRVSNILA---KSTETLNDSVQAALLKENEEIQLATYVTALT 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + RY + L + EP++ FFD+V+VN DD++VR NRL+LL ++N+ L V Sbjct: 623 SKLAPWFAEGRYQEALGELAQLREPVDNFFDKVMVNADDQQVRINRLTLLNELRNLFLKV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|262273136|ref|ZP_06050953.1| glycyl-tRNA synthetase beta chain [Grimontia hollisae CIP 101886] gi|262222892|gb|EEY74200.1| glycyl-tRNA synthetase beta chain [Grimontia hollisae CIP 101886] Length = 693 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 205/730 (28%), Positives = 343/730 (46%), Gaps = 68/730 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LKE + ++ ++ Y TP RL L + L Sbjct: 1 MAKNFLIELGTEELPPTQLRTLAEAFAANFEQELKEAELAHEGIKWYATPRRLALKVSAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G++ ++ D KG+ L Sbjct: 61 AEQQADKVVEKRGPAVSAAFDADGNPTKAAQGWARGCGIEVADADRMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ + A+ +P K MRW + +IRP+K++ +L Sbjct: 119 QEVKGQNTKDIVVALADKALANLPIAKPMRWGDKETL-----FIRPVKTLTILL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +++++ + + GHRF + + D Y LE V+ D E R+ I+ D Sbjct: 169 DELVEGTIMGVGSTRTIRGHRFMGEAEFTIDNADQYPAILEERGKVIADYEARKATIIAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A +G + DL+EE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 229 AQKAAKQLGGVADLEDDLVEEVTSLVEWPVVLTATFEEKFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYSEDKQLLPNFIFVSNIESKE-PRHVIEGNEKVVRPRLADAEFFFDTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ +L+ +F ++GT ++ RI L IA I ADV Sbjct: 338 ----------KRPLIDRLPQLETA--IFQKQLGTIKDKTDRITELAGYIADKIGADVEKA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF E QG +G YA E A+ E PR + +P + Sbjct: 386 KRAGLLAKCDLMTSMVFEFTETQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPGD 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S +++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E D+ L+ + Sbjct: 446 GVSSALAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYDLDLTDLVAK 504 Query: 532 Q--------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++I F R + + D D I+A+L Sbjct: 505 AKSLFANEDGSNRLTNENVEADVIEFMLGRFRAWYQDEGHSVDAIQAVLAMRPTQPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K + F S E + KR+ ILA K + E+S I+ + L+ +AEK L + Sbjct: 565 KRVKAVTHFRSLDAAESLAAANKRVGNILA---KFDGELSDTINSELLVEDAEKALADKV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + Y L + EP++ FFD V+V +D ++ NRL+LL +++ Sbjct: 622 TAMVEALAPVFAAGDYQTALTQLAELREPVDTFFDNVMVMAEDEALKANRLALLNTLRSQ 681 Query: 692 ILIVINVQKI 701 + V ++ + Sbjct: 682 FMNVADISLL 691 >gi|261757637|ref|ZP_06001346.1| glycyl-tRNA synthetase [Brucella sp. F5/99] gi|261737621|gb|EEY25617.1| glycyl-tRNA synthetase [Brucella sp. F5/99] Length = 761 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 336/759 (44%), Positives = 443/759 (58%), Gaps = 74/759 (9%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVG 76 MQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ S + E+ GP V Sbjct: 1 MQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLALDIRGLTVRSKDVHEDIKGPSVS 60 Query: 77 AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVP 136 A ++AI GFLR GL +S + DPKKGD Y+A L KP R ED++ +VP I+ P Sbjct: 61 APEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAAEDIVAELVPQTIRNFP 120 Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 WPKSMRW + A W+RPL+SILC E + K+ID D+ I GN+TYGHRF + Sbjct: 121 WPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDVDGIKSGNVTYGHRFLS 180 Query: 197 PH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIG 255 IKV+ + Y+ LE+A V+LD E R+ I DAH LA A GLELVED LLEE+ G Sbjct: 181 DGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFASGLELVEDDGLLEEVSG 240 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV---------------LA 300 LVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + L+ Sbjct: 241 LVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDASRLASPAPQHEEIQALS 300 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF LD Sbjct: 301 NKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGLD 360 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+KA Sbjct: 361 LKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAKA 420 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+LA Sbjct: 421 DLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVALA 480 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------- 529 DKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + PL Sbjct: 481 DKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEGQ 540 Query: 530 EDQNLILF-----------------FHDRLKLYLHD------------------------ 548 + L F + L Y + Sbjct: 541 MQRKLREFEAKLAAENSGGVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDRF 600 Query: 549 ------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 R+D I+A+L PE DNLL + ++ L F + G+ L AKR ILA Sbjct: 601 KVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILAA 660 Query: 603 EEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIE 662 EEKK +++ + P L EK L+ ++ + E++ + ++ L + P++ Sbjct: 661 EEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPVD 720 Query: 663 IFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 IFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 759 >gi|157149175|ref|YP_001456493.1| glycyl-tRNA synthetase subunit beta [Citrobacter koseri ATCC BAA-895] gi|166227911|sp|A8ARE4|SYGB_CITK8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157086380|gb|ABV16058.1| hypothetical protein CKO_05015 [Citrobacter koseri ATCC BAA-895] Length = 689 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 342/726 (47%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAASQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAEALLPNMIATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF I + + D Y + LE V+ D E R+ I Sbjct: 169 GDKLIPATILGIQSDRVIRGHRFMGEPEITIDTADQYPQILLERGKVVADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARQIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYAADGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLKTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K + ++ ++ L E L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KSDEVLNDRVNAATLKEPEEIALALQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + EP++ FF++V+V VDD+++R NRLS+L ++ + L V Sbjct: 623 DKLEPVFAEGRYQEALVELAELREPVDTFFEKVMVMVDDKDLRINRLSMLAKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|300957594|ref|ZP_07169796.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 175-1] gi|300315662|gb|EFJ65446.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 175-1] Length = 689 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLENNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|291615654|ref|YP_003518396.1| GlyS [Pantoea ananatis LMG 20103] gi|291150684|gb|ADD75268.1| GlyS [Pantoea ananatis LMG 20103] Length = 689 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 202/726 (27%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + + L + + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAEAFAAQVTAELDAANLNHGEVSWFAAPRRLALKIAS 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP V G KA +G+ R G+ ++ KG+ + Sbjct: 61 LSASQPDREVEKRGPAVAAAFDAEGNATKAAEGWARGNGITVEQAERL--STDKGEWLVY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAQVKGEAAQALLPGMVATALSKLPVPKLMRWGDSD-----VQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 +++I + I + GHRF I +++ D Y LE+ V+ D + R+ I Sbjct: 169 GDELIPATILGIKSDRVIRGHRFMGESEITLENADQYPDVLEKRGQVIADYQVRKAMIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAARRLGGVADLSDSLLEEVTSLVEWPVVLTATFEEKFLKVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++SD I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDAGGNLLPNFIFVTNIESSD-PQQIISGNEKVVRPRLADAEFFFDTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++G+ ++ RI+ L +A I ADV Sbjct: 339 -----------KKRLEDHLPRLET--VLFQKELGSLRDKTDRIQALAGWVAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 SPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D ++A+L +K Sbjct: 506 EAVRLYGSKLSNANAVNDVIDFMLGRFRSWYQEEGHSIDTLQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLDEAAALAAANKRVSNILA---KSTEPLNDSVQASLLKENEEIQLATFVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + E ++ FFD+V+VN +D VR NRL+LL ++ + L V Sbjct: 623 SKLQPYFAEGRYQDALIELAQLREAVDNFFDKVMVNAEDEAVRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|317046302|ref|YP_004113950.1| glycyl-tRNA synthetase subunit beta [Pantoea sp. At-9b] gi|316947919|gb|ADU67394.1| glycyl-tRNA synthetase, beta subunit [Pantoea sp. At-9b] Length = 689 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 337/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAEAFAAQVTAELDAAGLAHGEVNWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ + Sbjct: 61 LAAAQPDREVEKRGPAIAAAFDANGNATKAAEGWARGNGITVDQAERL--STDKGEWLVY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L ++ A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAQVKGESAQTLLPAMIATALSKLPIPKLMRWGASD-----VQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILN 230 +++I + I + GHRF I + D Y + L E V+ D R+ I Sbjct: 169 GDELIPATILGIQSDRVIRGHRFMGEPEITLDHADQYPQLLLERGKVVADYAARKAQIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA + A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 229 DAEQAALKLGGNADLSDSLLEEVTSLVEWPVVLTATFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++SD I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESSD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLET--VLFQKELGTLRDKTDRIQALAGWIAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGSKLSNGNVVDDVIDFMLGRFRTWYQEEGHSVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEAATTLAAANKRVSNILA---KSTETLNDSVQASLLKENEEIQLATFVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + E ++ FFD+V+VN DD+ VR NRL+LL ++ + L V Sbjct: 623 SKLQPYFAEGRYQDALIELAQLRESVDNFFDKVMVNADDQAVRINRLTLLAQLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|83311749|ref|YP_422013.1| glycyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] gi|123541640|sp|Q2W3X1|SYGB_MAGMM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|82946590|dbj|BAE51454.1| Glycyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] Length = 688 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 280/720 (38%), Positives = 409/720 (56%), Gaps = 53/720 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI+SEEIPARMQ +AA+DL ++ L + G+ + R Y TP RL L ++GL Sbjct: 1 MAEFLLEIFSEEIPARMQARAADDLRGMVSDGLAKNGITFDAARSYVTPRRLVLVIEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EE+ GPRV + +A++GFL+STG+ Q +D KG Y AV+ + R Sbjct: 61 LAGPDVSEEKRGPRVSSPAQAMEGFLKSTGMTVEQLEQ--RDTGKGVFYFAVINRKGRPT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL+ + A+ PWPKS RW ++ W+RP++SIL + I+ + Sbjct: 119 AEVLREVTEGAMATFPWPKSQRWGA-----NSIRWVRPIQSILALF-----DGSIVPVAF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 G++T GHRF AP P +V+ Y+ L A V+LDP RR+AIL A LA+A G Sbjct: 169 GPATAGDMTAGHRFLAPEPFRVKDFADYLSKLRHAKVMLDPVERRHAILAGAEGLAAAEG 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L+L D LL E+ GLVEW +GS D K++ +P E++ +++ +QK F +G LA Sbjct: 229 LQLKADDGLLAEVTGLVEWPVPLVGSIDDKFMDVPAEVLITSMRAHQKYFSLLKADGSLA 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI++SN++ DGG A+V GN RV+ ARL DA FW D+ Sbjct: 289 PRFIVISNMETDDGGKAVVAGNQRVLRARLSDAKFFWDTDR------------------- 329 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + L+ R+ +L F+A +GT ++V RI L IA +I AD A+ +RA L+KA Sbjct: 330 -KQRLEARLPKLAER--TFYASLGTVADKVDRISALAGNIAGMIGADRAVAERAARLAKA 386 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL TE+V EFPELQG +G+ YA+ E DAI H P+GP ++ PT +S+ V+LA Sbjct: 387 DLSTELVGEFPELQGLMGRYYALNDGETPEVADAIAAHYSPQGPGDSCPTAPVSVAVALA 446 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---------- 530 DK+D+L+ F+AINEKP+GSKDP+ALRRA LGIIR++LEN + +PLSQ I Sbjct: 447 DKIDSLVGFFAINEKPTGSKDPFALRRAALGIIRLVLENGLRLPLSQVIFLASGHYKANL 506 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFFS 582 +L+ FF DRL + L ++ +RHDLI AI D+L+ ++ ++ L F Sbjct: 507 VNSPGEVANDLLNFFADRLAVALKEKGVRHDLITAIFSLGGEDDLVRLLKRVEALGAFLD 566 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S G L++ +R I+ IEEKK+ I S Q L + EK L +SD G + + Sbjct: 567 SDDGANLLIAYRRAANIVRIEEKKDGTIFSGYADIQLLRQDEEKALEHALSDVGQAVSNA 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + L + P++ FFD+V VN D+ +R NRL LL I + + + + K+ Sbjct: 627 LVTEDFAAAMAALARLRRPVDAFFDKVTVNADEAPLRVNRLKLLAMIGSAMGRLADFSKV 686 >gi|46143625|ref|ZP_00134813.2| COG0751: Glycyl-tRNA synthetase, beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209267|ref|YP_001054492.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae L20] gi|166227908|sp|A3N3A1|SYGB_ACTP2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|126098059|gb|ABN74887.1| Glycyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 689 Score = 633 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 346/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + + ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQADLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + Sbjct: 65 QPSKEIEKRGPAVSAAFDADGKPTKAAEGWARGCGITVDQADRIATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ +E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E V+ D R+ IL + Sbjct: 173 IEGEILGVKINNVIRGHRFLGEREFTISHADEYLTALREKGMVVADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +RA Sbjct: 338 ------LKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGNKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS+EI L+ EK L + T + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISIEIDRTLLVEAEEKALAEQVISLQTELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|152978094|ref|YP_001343723.1| glycyl-tRNA synthetase subunit beta [Actinobacillus succinogenes 130Z] gi|171472951|sp|A6VLE1|SYGB_ACTSZ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|150839817|gb|ABR73788.1| glycyl-tRNA synthetase, beta subunit [Actinobacillus succinogenes 130Z] Length = 689 Score = 633 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 208/722 (28%), Positives = 344/722 (47%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +F EI +EE+P + K A + + LK+ G+ + + + P RL + + L+ + Sbjct: 5 NFFAEIGTEELPPKALKKLATAFAENVENELKQAGLAFDKVEWFAAPRRLAVKVLNLAAN 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVDQAERLVTD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++++ I+ ++ +P PK+MRW + ++RP+ ++ +L E + Sbjct: 123 EGQPTKNLMLDIIAKSLANLPIPKTMRWGDKN-----VQFVRPVHTVTLLLGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ I G GHRF ++ D Y LEE V+ D RR IL + Sbjct: 173 IEGEILGIASGRTIRGHRFLGEREFQISHADQYPSLLEEKGCVIADFNKRREMILTKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G + DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEDDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L FI VSNI D I++GN +VV RL DA F+ D+ Sbjct: 293 KEGKLLPHFIFVSNINPVD-PMPIIEGNEKVVRPRLSDAEFFFNTDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL V+F ++GT ++ RI+ L +IA I AD A +RA Sbjct: 339 -------KQRLEDLLPRLQT--VLFQQQLGTLLDKTKRIQSLAGEIAGQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR +N+P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L+ ++ Sbjct: 450 SSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLSLDLADLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVDDVVDFMLGRFRAWYQDGGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EI EI LL EK L + + + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVAGEIRSEIDRTLLLEAEEKALAEQVLALQSELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y D L + E ++ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 627 PVFAKGDYQTALDRLACLREVVDNFFDKVMVNAEDEKLRQNRQAMLNVLRNLFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|293391259|ref|ZP_06635593.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951793|gb|EFE01912.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] Length = 693 Score = 633 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 211/727 (29%), Positives = 351/727 (48%), Gaps = 67/727 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ ++N+ + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATAFADNVQAELNQAGLAFENIEWFAAPRRLAVKVLALATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QPSKEIEKHGPAVSAAFDAEGNPTKAAEGWARGCGITVDQAERLASD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLADIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF ++Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASGRTIRGHRFLGEREFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPLYE 292 Query: 295 R-----EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 + +G L FI VSNI D +AI++GN +VV RL DA F+K D Sbjct: 293 KTEGDKDGKLLPHFIFVSNINPDD-PSAIIEGNEKVVRPRLTDAEFFFKTD--------- 342 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A Sbjct: 343 -----------LKQKLVDRLPRLET--VLFQQQLGTLRDKTDRIEQLAGEIAKQIGADEA 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P Sbjct: 390 KAKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + ++ +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 KSLVASSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLV 509 Query: 530 EDQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + +++ F R + + D I D+I+A+L + Sbjct: 510 KKSAALFGDKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARV 569 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + ++ F + E + KR+ ILA + EI+L + AEK L + Sbjct: 570 RAVSHFRTLDSAEALAAANKRVANILAKADVAIGEINLTA----CVEPAEKALAEAVLAL 625 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 T +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L Sbjct: 626 QTEVQPLIAKGEYTAVLDKLANLRTPVDNFFDNVMVNAEDPALRQNRLAILNTLQGLFLQ 685 Query: 695 VINVQKI 701 V ++ + Sbjct: 686 VADISLL 692 >gi|301328324|ref|ZP_07221428.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 78-1] gi|300845219|gb|EFK72979.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 78-1] Length = 689 Score = 633 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGGIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|68249510|ref|YP_248622.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 86-028NP] gi|81336063|sp|Q4QLY5|SYGB_HAEI8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|68057709|gb|AAX87962.1| Glycyl-tRNA synthetase beta chain [Haemophilus influenzae 86-028NP] Length = 722 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 210/754 (27%), Positives = 342/754 (45%), Gaps = 96/754 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRTKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 KGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L + V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLRDKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGRLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L+ I Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLNDIISKAFD 509 Query: 532 ----------------------------------------------QNLILFFHDRLKLY 545 ++ F R + + Sbjct: 510 LYKELDNERLRNAPIAKTRGGFSEYPEGYVSFFTRGDDLVPKQKILDEVVDFMLGRFRAW 569 Query: 546 LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK 605 D I D+I+A+L ++ ++ F + E + KR+ ILA Sbjct: 570 YQDEGIAVDVIQAVLARRPTRPADFDARVRAVSHFRTLDSAEALAAANKRVSNILAKAGA 629 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 EI+L + AEK L + T +Q + Y + D L ++ P++ FF Sbjct: 630 AIGEINLTA----CVEPAEKALAEAVLALRTEVQPLIAQGDYTAVLDKLANLRAPVDSFF 685 Query: 666 DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 D V+VN +D +R NRL++L ++ + L V ++ Sbjct: 686 DNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 719 >gi|320175983|gb|EFW51056.1| Glycyl-tRNA synthetase beta chain [Shigella dysenteriae CDC 74-1112] Length = 689 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTVELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|193068544|ref|ZP_03049506.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E110019] gi|192958195|gb|EDV88636.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E110019] Length = 689 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAEFFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|303253230|ref|ZP_07339379.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248875|ref|ZP_07530887.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302647912|gb|EFL78119.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854612|gb|EFM86803.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 689 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 206/720 (28%), Positives = 344/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PSKIIEGNEKVVRPRLTDAEFFFKAD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLSLDLEDLVRKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + T + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISTEIDRTLLVEAEEKALAEQVISLQTELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|149375623|ref|ZP_01893392.1| Glycyl-tRNA synthetase, beta subunit [Marinobacter algicola DG893] gi|149360025|gb|EDM48480.1| Glycyl-tRNA synthetase, beta subunit [Marinobacter algicola DG893] Length = 695 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 198/724 (27%), Positives = 344/724 (47%), Gaps = 62/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + ++ + + L+E G+ + + + P RL + ++ Sbjct: 1 MATQDFLVELGTEELPPKALKPLSDAFTRGITHGLEEAGIQFGKVEAFAAPRRLAVRVRD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P+K E+ GP V G +A+ GF S G+ ++ D KG + Sbjct: 61 LEDAQPDKPVEKRGPAVKAAFDDSGNPTRALTGFATSLGVTPDQLDTLETD--KGAWVVY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + R +++ +V ++ +P PK MRW + ++RP+ + + Sbjct: 119 RTIEKGRPTVELMPELVDQSLAALPIPKRMRWGAHRT-----EFVRPVHWAILLF----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 K+ID + + GN T GHRFH P + V + Y L + V+ D RR I + Sbjct: 169 GNKVIDTPIMGLTPGNKTRGHRFHCPKSLIVPTPGDYEVVLRQEGYVIADFAERREQIRD 228 Query: 231 DAHRLASA-VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A G + V D+DLL+E+ L EW MG F++++L +P E + ++K +QK Sbjct: 229 GVTAIAKKEAGGQAVIDEDLLDEVTALNEWPVPLMGRFEERFLEVPAEALISSMKEHQKY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + +G + FI V+N+++ D ++ GN +V+ RL DA F+ D+ Sbjct: 289 FHVVSADGRMLPLFITVANLESKD-PQQVISGNEKVIRPRLSDAAFFYDTDR-------- 339 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L+ R+ +L +VF K+G+ ++ R+ L KKIA I +D Sbjct: 340 ------------KTRLEDRIDQLKP--IVFQDKLGSIYDKSVRVAALAKKIADAIGSDPV 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 L +RA +L+K DL TE+V EF +LQG +G+ YA EN A+ E PR +++P Sbjct: 386 LAERAAMLAKTDLVTEMVLEFTDLQGIMGQYYAANDGENEDVASALNEQYMPRFAGDDLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 V++AD++D+L+ + IN+ PSG++DP+ LRRA+LG++RII+E ++ + L Sbjct: 446 ATLTGCAVAIADRIDSLVGLFGINQPPSGTRDPFGLRRASLGVLRIIIERELPLDLQTLC 505 Query: 530 E--------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 E ++ + +R + + ++ I ++ A+ L +K Sbjct: 506 EWAVEQHNSFTEPKVANTVVDYMLERFRAHYEEQGISAEVYLAVHARRPTRPLDFDRRVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + KR+ IL + I I + L +AE L I Sbjct: 566 AVEAFRQLPEALALAGANKRVSNILTKQ--GGDSIGESIDSELLQDKAEITLADQIRQQA 623 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + Y L S+ EP++ FFD+V+V DD VR+NRL++L ++N+ L V Sbjct: 624 DKALPLFEKGDYATALSSLASLREPVDNFFDEVMVMADDEAVRNNRLAMLNLLRNLFLRV 683 Query: 696 INVQ 699 ++ Sbjct: 684 ADIS 687 >gi|163761029|ref|ZP_02168107.1| glycyl-tRNA synthetase subunit beta [Hoeflea phototrophica DFL-43] gi|162281810|gb|EDQ32103.1| glycyl-tRNA synthetase subunit beta [Hoeflea phototrophica DFL-43] Length = 788 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 329/786 (41%), Positives = 444/786 (56%), Gaps = 85/786 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KAA DL + L + G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLIELRSEEIPARMQRKAAGDLRKSVTDALVDAGLTYEAAREYWTPRRLTLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++A+ GF+R GL IS+ + DPKKGD Y+A + +P R Sbjct: 61 ARSKDVHEEIKGPSTKAPEQALAGFMRKAGLNDISEAHVHTDPKKGDFYVAHISRPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA------------FSWIRPLKSILCILVA 168 E ++ ++P I+ WPKSMRW P + W+RPL+SI+C Sbjct: 121 EVIIADVMPGIIRGFSWPKSMRWGAASMPKGSSYHGIEGKGSESLKWVRPLQSIICTFGP 180 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E + +I ++ + GN T GHRFHAP P V+ D Y LE A V+LD E R+ I Sbjct: 181 ETEEPTVIAFEIDGLVAGNTTSGHRFHAPDPFTVRRFDDYADKLERARVVLDAERRKEII 240 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L+DA LA A GLELVED+ LL+E+ GLVEW V MG F++ +L +P+++IRLTIKTNQK Sbjct: 241 LSDARNLAFASGLELVEDEGLLDEVSGLVEWPVVLMGEFEEDFLAIPDDIIRLTIKTNQK 300 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 CFV R L+N FILVSNI+ASD G I GN +VV ARL DAL+FW DQ +LP+L Sbjct: 301 CFVLRRPGRGLSNKFILVSNIEASDAGKEIAYGNGKVVRARLSDALYFWNTDQADLPDLE 360 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L SA K LD+SKPLDQRMARLD L V FHAK+GTQGERV RI L ++A ++ AD Sbjct: 361 KLTASAEKLGLDMSKPLDQRMARLDQLGVTFHAKLGTQGERVQRIAKLAAELAPIVGADP 420 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +L+KADL TE+V EFPELQG +G+ YA LQNEN S A EEH KP+GP + V Sbjct: 421 EHATRAAMLAKADLTTEVVGEFPELQGVMGRIYAGLQNENASVALAAEEHYKPQGPSDQV 480 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI----- 523 PT+ +SI V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRI++EN +D+ Sbjct: 481 PTDPVSIAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRILVENGVDLRVVTS 540 Query: 524 --------------------------------PLSQFIEDQNLILFFHDRLKLYLHDRDI 551 L + L + D+ + R Sbjct: 541 SGETASLLRFIGTSVADHLVGLQMRGLAKIIADLEKLESKGALPSGYRDQFAKDMVSRKA 600 Query: 552 RHDLI----EAILRPENDNLLTIVDLIKH----------LNEFFSSAKGEKFLLSAKRI- 596 + I + +D L D +K L + + + + L +R+ Sbjct: 601 AENFINETADLSWAAASDLLSFFHDRLKVYLRDQGARHDLIDAVITPQSDDLLDITRRVA 660 Query: 597 ---------------------FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ILA EEKK ++ I P L+AE+ L+ ++ Sbjct: 661 ALGAFLDTDDGKNLLAGTKRGANILAAEEKKGTAVAETIDPALFELDAERNLFNAVTQSV 720 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + ++++ Y L ++ EP++ FF+ VLVN DD VR NRL+LL I++ V Sbjct: 721 SAAIQVIENEDYAAAMSALATLREPVDSFFEAVLVNADDEAVRANRLALLAMIRHATGAV 780 Query: 696 INVQKI 701 + +I Sbjct: 781 ADFSRI 786 >gi|307262297|ref|ZP_07543946.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868060|gb|EFM99887.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 689 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 205/720 (28%), Positives = 341/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLVTA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PSKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVDDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISTEIDRTLLVEAEEKALAEQVISLQMELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|15804104|ref|NP_290143.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 EDL933] gi|12518293|gb|AAG58707.1|AE005582_10 glycine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EDL933] Length = 689 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANXXAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|83642934|ref|YP_431369.1| glycyl-tRNA synthetase subunit beta [Hahella chejuensis KCTC 2396] gi|123767557|sp|Q2SQY0|SYGB_HAHCH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|83630977|gb|ABC26944.1| Glycyl-tRNA synthetase, beta subunit [Hahella chejuensis KCTC 2396] Length = 692 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 211/721 (29%), Positives = 357/721 (49%), Gaps = 59/721 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+EI +EE+P + + AE + + L++ + + + Y P RL +++ GL+ Sbjct: 5 DFLVEIGAEELPPKALRQLAEAFAQGIRQRLEKAQLSFSELTWYAAPRRLAVHVSGLAEK 64 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ E+ GP GA KA +GF RS G +++ D KG + ++ Sbjct: 65 QPDLEVEKRGPALQAAFDAAGAPTKACEGFARSCGTTPDKLEKLETD--KGVWLVFRSKQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L IV ++ +P PK MRW + ++RP+ I+ + EK+ Sbjct: 123 AGAPTTGLLPAIVEESLAALPIPKRMRWGARRT-----EFVRPVHWIIMLF-----GEKV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 ID ++ + GN T GHRFH P PI++ + +Y L+ V+ D E R+ I Sbjct: 173 IDCEILGLKAGNTTLGHRFHHPAPIEIATPANYKDALKNTGYVMADFEERKALIRQQVEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A V D++LLEE+ L EW MG F+ ++L +P E + T+K NQK F Sbjct: 233 IAKQTSGMAVIDEELLEEVASLNEWPTALMGRFEDRFLEVPAEALISTMKGNQKYFHVVD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG + FI V+NI++ D ++ GN RV+ RL DA F+ D+ Sbjct: 293 AEGRMLPYFITVANIESKD-PQQVIDGNERVIRPRLSDAAFFFSTDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L R+ L +VF ++GT ++ R+ L KIA ID++ RA Sbjct: 339 -------KRTLASRLEDLKP--IVFQQQLGTVYDKAIRVGKLAAKIAAKIDSNPEWAQRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSK DL TE+V EFPELQG +G+ YA + +E A EE PR + +PT Sbjct: 390 GELSKTDLATEMVMEFPELQGTMGRYYAAIDSEPEEVSMAQEEQYLPRFAGDQLPTTLTG 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 VSLADKLDT++ + IN+ P+G+KDP+ LRRA LG++RI++E K+D+ L++ ++ Sbjct: 450 CAVSLADKLDTIVGIFGINQPPTGAKDPFGLRRAALGVLRILVEKKLDLDLAECVQWAQE 509 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ + DR + + + + ++ ++L + + + EF Sbjct: 510 LHGDLPAENLETAVVDYMLDRFRAWYEEAGVPTEVFLSVLARRPTKPVEFDQRVLAVAEF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ IL+ E+ + +P+ EAEK L+ + + + Sbjct: 570 LKLDAAQALAAANKRVSNILSKEQ--VDISAESANPELFTEEAEKNLFRALQEKSESARP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + + Q L + + I++FFD+V+V VDD +R NR++LL ++++ L V ++ Sbjct: 628 YIEQRNFTQALQQLAELKDVIDLFFDKVMVMVDDPAIRSNRMTLLASLRHVFLQVADISL 687 Query: 701 I 701 + Sbjct: 688 L 688 >gi|320187712|gb|EFW62387.1| Glycyl-tRNA synthetase beta chain [Shigella flexneri CDC 796-83] Length = 689 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 205/726 (28%), Positives = 337/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + E + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLVESFAANFTVELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|261221621|ref|ZP_05935902.1| glycyl-tRNA synthetase subunit beta [Brucella ceti B1/94] gi|260920205|gb|EEX86858.1| glycyl-tRNA synthetase subunit beta [Brucella ceti B1/94] Length = 761 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 336/759 (44%), Positives = 443/759 (58%), Gaps = 74/759 (9%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVG 76 MQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ S + E+ GP V Sbjct: 1 MQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLVLDIRGLTVRSKDVHEDIKGPSVS 60 Query: 77 AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVP 136 A ++AI GFLR GL +S + DPKKGD Y+A L KP R ED++ +VP I+ P Sbjct: 61 APEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAAEDIVAELVPQTIRNFP 120 Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 WPKSMRW + A W+RPL+SILC E + K+ID D+ I GN+TYGHRF + Sbjct: 121 WPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDVDGIKSGNVTYGHRFLS 180 Query: 197 PH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIG 255 IKV+ + Y+ LE+A V+LD E R+ I DAH LA A GLELVED LLEE+ G Sbjct: 181 DGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFASGLELVEDDGLLEEVSG 240 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV---------------LA 300 LVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + L+ Sbjct: 241 LVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDASRLASPAPQHEEIQALS 300 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF LD Sbjct: 301 NKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGLD 360 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+KA Sbjct: 361 LKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAKA 420 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+LA Sbjct: 421 DLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVALA 480 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------- 529 DKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + PL Sbjct: 481 DKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEGQ 540 Query: 530 EDQNLILF-----------------FHDRLKLYLHD------------------------ 548 + L F + L Y + Sbjct: 541 MQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDRF 600 Query: 549 ------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 R+D I+A+L PE DNLL + ++ L F + G+ L AKR ILA Sbjct: 601 KVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILAA 660 Query: 603 EEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIE 662 EEKK +++ + P L EK L+ ++ + E++ + ++ L + P++ Sbjct: 661 EEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPVD 720 Query: 663 IFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 IFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 759 >gi|187731977|ref|YP_001882247.1| glycyl-tRNA synthetase subunit beta [Shigella boydii CDC 3083-94] gi|238689523|sp|B2U566|SYGB_SHIB3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|187428969|gb|ACD08243.1| glycyl-tRNA synthetase, beta subunit [Shigella boydii CDC 3083-94] Length = 689 Score = 632 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTVELDNAGLAHGTVQWFAAPRRLTLKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|82779378|ref|YP_405727.1| glycyl-tRNA synthetase subunit beta [Shigella dysenteriae Sd197] gi|123560982|sp|Q328L9|SYGB_SHIDS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|81243526|gb|ABB64236.1| glycine tRNA synthetase, beta subunit [Shigella dysenteriae Sd197] Length = 689 Score = 632 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFAIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDQ-QQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQLQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|33152920|ref|NP_874273.1| glycyl-tRNA synthetase subunit beta [Haemophilus ducreyi 35000HP] gi|71153558|sp|Q7VKG6|SYGB_HAEDU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|33149145|gb|AAP96662.1| glycyl-tRNA synthetase beta subunit [Haemophilus ducreyi 35000HP] Length = 688 Score = 631 bits (1628), Expect = e-178, Method: Composition-based stats. Identities = 210/722 (29%), Positives = 351/722 (48%), Gaps = 62/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + K A + + L++ G+ ++ + + TP RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKKLATAFADNIQAELEQAGLAFEKIEWFATPRRLAVKVLSLAIA 64 Query: 63 SPEKIEERLGPRVG-------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP VG KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKEIEKRGPAVGSAFDADGQPTKAAEGWARGCGISVEQADRVVTD--KGEWLVHRAVV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +D+L +V A+ K+P K MRW+ +IRP+ ++ +L ++ Sbjct: 123 EGKPTKDLLVDMVASALAKLPIAKPMRWAD-----KTVQFIRPVHTVTLLL-----GNEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ I N+ GHRF ++ D Y + L + V+ D R+ IL DA Sbjct: 173 IEGEILGITIANVVRGHRFLGESQFQIAHADEYPQILRDKGAVIADFAERKAIILRDAQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G + DLLEE+ LVE+ V + F++++L +P E + T+K +QK F Sbjct: 233 KAAALGGVADIEDDLLEEVTSLVEYPNVLVAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L FI VSNI D +AI++GN +VV RL DA F+K D Sbjct: 293 KEGNLLPHFIFVSNINPQD-PSAIIEGNEKVVRPRLSDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L ++ RL+ V+F ++GT ++ RI L IA+ I ADV RA Sbjct: 338 ------LKQRLVDQLPRLET--VLFQQQLGTLRDKTDRIEQLSGVIAEQIGADVQKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E PR + +PT+ ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDALPTSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +V+LADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L +E Sbjct: 450 CSVALADKIDTLTGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLVHLVEKSTG 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNKAVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+ + E+ L + ++ Sbjct: 570 FRTFESAEALAAANKRVTNILAKAD----IAIGEINLSACVEPTERALAEAVLALKDEVR 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + L ++ P++ FFD V+VN +D +R NRL++L ++++ L V ++ Sbjct: 626 PLIAKANYTAVLTQLANLRTPVDNFFDHVMVNAEDPSLRQNRLAILSTLQSLFLEVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|322830761|ref|YP_004210788.1| glycyl-tRNA synthetase, subunit beta [Rahnella sp. Y9602] gi|321165962|gb|ADW71661.1| glycyl-tRNA synthetase, beta subunit [Rahnella sp. Y9602] Length = 689 Score = 631 bits (1628), Expect = e-178, Method: Composition-based stats. Identities = 196/723 (27%), Positives = 331/723 (45%), Gaps = 61/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI +EE+P + AE + L L + + +++ + P RL L + GL Sbjct: 4 KTFLVEIGTEELPPKALRSLAESFAANLTAELDAANLPHGDVKWFAAPRRLALKVSGLHE 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 64 SQADREVEKRGPAVAQAFDAEGKPSKAAEGWARGCGITVDQADRLVTD--KGEWLVYRAH 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L ++ ++ K+P PK MRW + ++RP+ ++ +L ++ Sbjct: 122 VKGESAQQLLPAMIATSLSKLPIPKLMRWGDSD-----VQFVRPVHTVTLLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAH 233 +I + I GHRF + + D Y + LE V+ D E R+ I DA Sbjct: 172 LIPAKILGIDSARTLRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEQRKALIKRDAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 KAAKEIGGIADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 292 DAAGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR------------ 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 K L+ + RL+ V+F ++GT ++ RI+ L IA+ I A+V R Sbjct: 339 --------KKRLEDNLPRLET--VLFQKQLGTLRDKTDRIQALSGWIAEKIGANVENAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E A+ E +PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEQEEVAVALNEQYQPRFAGDELPASLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 449 ACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAV 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F R + + + D I+A+L +K ++ Sbjct: 509 RLYGDKLTNEKVVDDVVDFMLGRFRAWYQEEGHAVDTIQAVLARRPTKPADFDARVKAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA K + + L AE +L + + Sbjct: 569 YFRTLDEAATLAAANKRVSNILA---KSTDVLLDHVHASVLKEPAELKLATHLVVLRDKL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + +Y + L ++ E ++ FFD V+V ++ VR NRL+LL ++ + L V ++ Sbjct: 626 EPLFAAGQYKEALVELAALRETVDTFFDTVMVMDENEAVRINRLTLLSKLRELFLQVADI 685 Query: 699 QKI 701 + Sbjct: 686 SLL 688 >gi|82545927|ref|YP_409874.1| glycyl-tRNA synthetase subunit beta [Shigella boydii Sb227] gi|123558352|sp|Q31V62|SYGB_SHIBS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|81247338|gb|ABB68046.1| glycine tRNA synthetase, beta subunit [Shigella boydii Sb227] gi|332089349|gb|EGI94453.1| glycyl-tRNA synthetase beta subunit [Shigella boydii 3594-74] Length = 689 Score = 631 bits (1628), Expect = e-178, Method: Composition-based stats. Identities = 205/726 (28%), Positives = 337/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + E + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLVESFAANFTVELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYACHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|170718076|ref|YP_001785112.1| glycyl-tRNA synthetase subunit beta [Haemophilus somnus 2336] gi|189082269|sp|B0UWA9|SYGB_HAES2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|168826205|gb|ACA31576.1| glycyl-tRNA synthetase, beta subunit [Haemophilus somnus 2336] Length = 688 Score = 631 bits (1627), Expect = e-178, Method: Composition-based stats. Identities = 205/720 (28%), Positives = 347/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEQELNQAGLAFEKVEWFAAPRRLAVKVLGLAEA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKQVEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ A+ +P PK+MRW ++RP+ ++ + A+ + Sbjct: 123 EGQPTKNLLVGIIDKALAGLPIPKTMRWGDKTE-----QFVRPVHTVTLLFGAD-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF + D Y + L+E V+ D R+ IL + Sbjct: 173 IEGEILGVASGRTVRGHRFLGEREFSLDHADQYPQLLKERGSVVADFNERKALILATSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G +++LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEELLEEVTSLVEYPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPDD-PSKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD RA Sbjct: 338 ------LKQKLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADQTKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEDVAVALNEQYMPRFAGDTLPNSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK+DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKIDTLTGIFGIGQSPKGSADPFALRRAALGCLRIIVEKNLPLDLVDIVAKATA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + I D+I+++L ++ ++ Sbjct: 510 LFGDKLTNKNVVDEVVDFMLGRFRAWYESEGIAVDVIQSVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI L + + AEK L + +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADIAIGEIDLGV----CVESAEKTLAEAVIALKGEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ +PI+ FFD V+VNV+++ +R NRL++L ++N+ L V ++ Sbjct: 626 PLIAQGDYTAVLDKLANLRQPIDAFFDGVMVNVEEQTLRQNRLAILSTLQNLFLQVADIS 685 >gi|113460624|ref|YP_718690.1| glycyl-tRNA synthetase subunit beta [Haemophilus somnus 129PT] gi|123131976|sp|Q0I273|SYGB_HAES1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|112822667|gb|ABI24756.1| glycyl-tRNA synthetase beta chain [Haemophilus somnus 129PT] Length = 688 Score = 631 bits (1627), Expect = e-178, Method: Composition-based stats. Identities = 205/720 (28%), Positives = 348/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEQELNQAGLAFEKVEWFAAPRRLAVKVLGLAEA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ KG+ + Sbjct: 65 QPSKQVEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERL--STDKGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L +++L I+ A+ +P PK+MRW ++RP+ ++ + A+ + Sbjct: 123 EGQLTKNLLVGIIDKALAGLPIPKTMRWGDKTE-----QFVRPVHTVTLLFGAD-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF + D Y + L+E V+ D R+ IL + Sbjct: 173 IEGEILGVASGRTVRGHRFLGEREFSLDHADQYPQLLKERGSVVADFNERKALILATSRE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G +++LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEELLEEVTSLVEYPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPDD-PSKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD RA Sbjct: 338 ------LKQKLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADQTKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEDVAVALNEQYMPRFAGDTLPNSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK+DTL + I + P GS DP+ALRRA LG +RII+E + + L+ + Sbjct: 450 CSVALADKIDTLTGIFGIGQSPKGSADPFALRRAALGCLRIIVEKNLPLDLADIVAKATA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + I D+I+++L ++ ++ Sbjct: 510 LFGDKLTNKNVVDEVVDFMLGRFRAWYESEGIAVDVIQSVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI L + + AEK L + +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADIAIGEIDLGV----CVESAEKTLAEAVLALKGEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ +PI+ FFD V+VNV+++ +R NRL++L ++N+ L V ++ Sbjct: 626 PLIAQGDYTAVLDKLANLRQPIDAFFDGVMVNVEEQTLRQNRLAILSTLQNLFLQVADIS 685 >gi|242237521|ref|YP_002985702.1| glycyl-tRNA synthetase subunit beta [Dickeya dadantii Ech703] gi|242129578|gb|ACS83880.1| glycyl-tRNA synthetase, beta subunit [Dickeya dadantii Ech703] Length = 689 Score = 631 bits (1627), Expect = e-178, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 336/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L G+ YQ++ + P RL L + G Sbjct: 1 MTDKTFLVEIGTEELPPKALRNLAESFAANFTAELDTAGLGYQSVNWFAAPRRLALKVAG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LSASQPDREVEKRGPAIAQAFDAAGHPTKAAEGWARGCGITVSQAERL--TTDKGEWLLF 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAQVKGEAAQALLPGMVSAALAKLPIPKLMRWGDNDT-----QFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 ++++ + I GHRF + + D Y + LE VL D E R+ I Sbjct: 169 GDELVPGTVLGIDSARTLRGHRFMGEPEFTIDNADQYPQILLERGKVLADYEARKAQIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAARNIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PQQIIAGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI L +A I ADV Sbjct: 339 -----------KKRLEDHLPRLET--VLFQQQLGTLRDKTDRIAALAGWVAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 AKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG +RII+E ++ + L E Sbjct: 446 SPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGALRIIVEKRLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEQAAALAAANKRVSNILA---KSTETLNDGVQAALLKENEEIQLATYVTALT 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + RY + L + E ++ FFD+V+VN +D++VR NRL+LL ++N+ L V Sbjct: 623 SKLAPWFAEGRYQEALVELAQLRESVDNFFDKVMVNAEDQQVRINRLTLLNELRNLFLKV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|304398082|ref|ZP_07379957.1| glycyl-tRNA synthetase, beta subunit [Pantoea sp. aB] gi|304354368|gb|EFM18740.1| glycyl-tRNA synthetase, beta subunit [Pantoea sp. aB] Length = 689 Score = 631 bits (1627), Expect = e-178, Method: Composition-based stats. Identities = 201/722 (27%), Positives = 336/722 (46%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + + L + + + + P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAEAFAAQVTAELDAANLSHGEVSWFAAPRRLALKVANLSAS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QPDREVEKRGPAVSAAFDADGNATKAAEGWARGNGITVDQAERLATD--KGEWLVYRAQV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L ++ A+ K+P PK MRW + ++RP+ ++ +L +++ Sbjct: 123 KGEAAQALLPAMIATALSKLPVPKLMRWGDSD-----VQFVRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I + I + GHRF I + + D Y LE+ V+ D + R+ I DA Sbjct: 173 IPGTILGIKSDRVIRGHRFMGESEITLDNADQYPDVLEKRGQVIADYQVRKAMIKADAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 233 AARRLGGNADISDSLLEEVTSLVEWPVVLTATFEEKFLKVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI V+NI++S+ I+ GN +VV RL DA F+ D+ Sbjct: 293 NDGNLMPNFIFVTNIESSE-PRQIISGNEKVVRPRLADAEFFFNTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 339 -------KKRLEDHLPRLET--VLFQKELGTLRDKTDRIQALASWIAGEIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P++ ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSSPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++I F R + + + D ++A+L +K ++ Sbjct: 510 LYGSKLSNARVVDDVIDFMLGRFRTWYQEEGHSIDTLQAVLARRPTRPADFDARMKAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L E +L ++ + +Q Sbjct: 570 FRTLEAASALAAANKRVSNILA---KSTETLNESVQASLLKENEEIQLATFVTALSSKLQ 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY L + ++ FFD+V+VN DD+ VR NRL+LL ++ + L V ++ Sbjct: 627 PYFAEGRYQDALVELAQLRTAVDNFFDKVMVNADDQAVRVNRLTLLSKLRELFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|317494687|ref|ZP_07953099.1| glycyl-tRNA synthetase beta subunit protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917289|gb|EFV38636.1| glycyl-tRNA synthetase beta subunit protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 689 Score = 630 bits (1626), Expect = e-178, Method: Composition-based stats. Identities = 207/720 (28%), Positives = 341/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL L + L Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDNADLAHGEVTWYAAPRRLALKVAALHES 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 65 QPDREIEKRGPAIAQAFDAEGKPTKAAEGWARGCGITVDQAERLTSD--KGEWLLFRAHQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L T+V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQQLLPTLVTNALGKLPIPKLMRWGNNDT-----QFVRPVHTVTLLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I + IP + GHRF + + D Y + L V+ D E R+ I D+ + Sbjct: 173 IPATILGIPSDRVIRGHRFMGEPQFTIDNADQYPQILMERGKVIADYETRKAIIKRDSEQ 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGIADMSESLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 293 AAGKLLPNFIFVTNIESKD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ +RI L IA+ I ADV L RA Sbjct: 339 -------KQRLEDNLPRLET--VLFQQQLGTLRDKTNRIEALSGWIAEQIGADVNLATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA EN A+ E +PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGENEEVAVALNEQYQPRFAGDALPESLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L E+ Sbjct: 450 CSVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLVTLTEEAAR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L +K ++ Sbjct: 510 LYGQKLTNANVVDDVVDFMLGRFRAWYQEEGHSVDTIQAVLARRPTKPADFDARMKAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLPEAAALAAANKRVSNILA---KSTEVLADRVHASVLKEAAEIKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY + L ++ EP++ FF+QV+V +D +VR NRL+LL ++++ L V ++ Sbjct: 627 PLFAEGRYQEALSELAALREPVDDFFEQVMVMAEDEQVRINRLTLLSKLRDLFLQVADIS 686 >gi|319406070|emb|CBI79700.1| glycyl-tRNA synthetase beta chain [Bartonella sp. AR 15-3] Length = 742 Score = 630 bits (1625), Expect = e-178, Method: Composition-based stats. Identities = 337/738 (45%), Positives = 453/738 (61%), Gaps = 37/738 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPA MQ +AA DL +I L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MPDLLLELFSEEIPASMQRRAASDLKKCVINKLVNAGLTYKVACEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP V + ++ ID FLR+TGL IS I D KKGD Y+A + RL Sbjct: 61 KSSPNVHEERKGPNVQSPQQIIDAFLRTTGLNDISKLHIAHDDKKGDFYIAKTTQKGRLA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PW KSMRW + A WIR L++ILC+ + + +I + Sbjct: 121 EEIIADILPDIIRNFPWKKSMRWGKESAKSGALKWIRSLQNILCVFGSAMDETHVIPFTV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + PI+++ D Y+ LE V+LD E R++ IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSNGEPIQIRRFDDYVTQLENHKVILDAERRKDIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT--RTREG 297 GLEL+EDK LLEE+ GLVEW V MG+FDK +L +P E+IRLTI+T+QKCFVT R +G Sbjct: 241 GLELIEDKALLEEVAGLVEWPVVLMGNFDKTFLNIPPEIIRLTIQTHQKCFVTHKRGEKG 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILV+NI ASD G I +GNS+VV ARL DAL+FW+ DQ NLPN++ L+ SA K Sbjct: 301 KLSNHFILVANILASDKGIEISKGNSKVVHARLSDALYFWQTDQCNLPNITRLESSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A LD L+V FH K+GTQG RV RI L + IA L AD L RA VL Sbjct: 361 DLDLNKPLDQRIAHLDYLNVTFHTKLGTQGARVERIATLTQTIAPLAQADSILAKRAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL T IV EFPELQG IG++YA+LQ E+ +AIE+H KP GP + +P I+ITV Sbjct: 421 AKADLQTGIVSEFPELQGLIGRKYALLQGEDPRVAEAIEDHYKPLGPKDRIPFEPIAITV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----- 532 +LADK+DTLI FW INEKP+ SKDPYALRRA LG+I++IL N I L + Sbjct: 481 ALADKIDTLIGFWFINEKPTSSKDPYALRRAALGVIKLILLNDWKINLIPLLHQAMNCLL 540 Query: 533 -----------------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +L+ FFH+RLK YL D RHD+IEA+L Sbjct: 541 QQKIKYATSEIESVQLQNMSIEKKENIILDLLAFFHERLKGYLKDEGARHDIIEAVLTKS 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +D++L I ++ L F ++ G+ L++ KR IL E KK I ++ P+ + Sbjct: 601 DDDILFITRRVEALTFFINTHDGDSLLIAVKRAINILENEIKKGTAIINKVKPELFIETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY + I + + + + L + +PI FF++V VN D+ +R NR + Sbjct: 661 EKQLYQATIETEKKIADHIHVTELSSVLNSLSLLKKPINAFFEKVFVNDDNINIRANRFA 720 Query: 684 LLQYIKNIILIVINVQKI 701 LL+ I+ + V + K+ Sbjct: 721 LLERIRIVTQRVADFSKL 738 >gi|292490371|ref|YP_003525810.1| glycyl-tRNA synthetase subunit beta [Nitrosococcus halophilus Nc4] gi|291578966|gb|ADE13423.1| glycyl-tRNA synthetase, beta subunit [Nitrosococcus halophilus Nc4] Length = 691 Score = 630 bits (1625), Expect = e-178, Method: Composition-based stats. Identities = 220/722 (30%), Positives = 354/722 (49%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+P + K +E L+ L L+ G+ Y +++ Y P RL ++++ L+ Sbjct: 6 DLLIEIGTEELPPKALRKLSESLTQELSQRLQAAGLAYGSLKGYGAPRRLAVWVQELTAS 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ ER GP + G A GF RS G+ ++ + KG + R+ Sbjct: 66 QPDRVLERRGPALTAAFDDEGRATAAAQGFARSCGVPVDELESLESE--KGAWLVHRQRR 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L I+ ++Q +P PK MRW+ + +IRP+ ++ + ++ Sbjct: 124 QGAPTRELLPDILAQSLQALPIPKRMRWNDL-----SVEFIRPVHWLVLLF-----GDEA 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I +L + T GHRFH P P+ + Y LE E VL D RR AI Sbjct: 174 IPAELLGVQADRETRGHRFHHPAPLYLAEPAAYGPLLETEGKVLADFSVRREAIYAQVVE 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A VG E + + LL+E+ GLVEW G F+ +L LPEE++ T++ +QK F R Sbjct: 234 AAKKVGGEALVEDALLDEVTGLVEWPVALAGRFEPDFLQLPEEVLIATMQDHQKYFPVRD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI VSNI++ + A+V+GN RV+ RL DA F+ D+ Sbjct: 294 GQGHLLPYFITVSNIES-EQPEAVVEGNERVIRPRLADAAFFYATDR------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L R +L + F K+G+ ER R+ L + IA I + +RA Sbjct: 340 -------KESLASRCGKLK--KITFQEKLGSVFERTERLAQLARSIAISIGGNGDWAERA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL TE+V EFPELQG +G+ YA+ +E +A+ E PR + +P Sbjct: 391 GLLSKCDLVTEMVTEFPELQGIMGRYYALRDDEPAEVAEALREQYLPRFAGDKLPGTPTG 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP---------- 524 +SLAD+LDTL+ + I E PSG +DPY LRRA LG++RII+E ++ + Sbjct: 451 QALSLADRLDTLVGLFGIGEPPSGDRDPYGLRRAALGVLRIIIEAELGLDLRLLLERGCQ 510 Query: 525 -----LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L++ + + +RL+ Y + R D IEA+L + +K + Sbjct: 511 AYGGRLTESNTAAQVHDYLLERLRGYYLEAGFRPDEIEAVLVLKPGRPWDFDRRLKGVAS 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KRI IL ++K I ++ P L AE+ L + D + Sbjct: 571 FRELPEAESLSAANKRIRNILRKSKEK---IPPQVEPGLLQDPAEQALATQMYDLEREVS 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + Y L S+ ++ FFD+V+V V+D +R NRL+LL+ ++ + L V ++ Sbjct: 628 PLLERQDYQAALRALASLRGAVDRFFDEVMVMVEDPALRANRLALLERLQTLFLQVADIS 687 Query: 700 KI 701 ++ Sbjct: 688 RL 689 >gi|50119046|ref|YP_048213.1| glycyl-tRNA synthetase subunit beta [Pectobacterium atrosepticum SCRI1043] gi|81827262|sp|Q6DB17|SYGB_ERWCT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|49609572|emb|CAG73005.1| glycine-tRNA synthetase, beta subunit [Pectobacterium atrosepticum SCRI1043] Length = 689 Score = 630 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 204/724 (28%), Positives = 332/724 (45%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L + + ++ + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRNLAESFAANFTAELDAANLAHGDVSWFAAPRRLALKVAR 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LSASQPDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVEQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRWS + ++RP+ ++ +L Sbjct: 119 RAHAKGEQAQALLAGMVSTALSKLPIPKLMRWSDKET-----QFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 E++I + I GHRF + + + Y + LE V+ D + R+ I Sbjct: 169 GEELIPGQVLGIHSARTIRGHRFMGEAEFTIDNAEQYPQILLERGKVVADYDARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEDAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNSGNLLPHFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++G+ ++ RI+ L +A I ADV Sbjct: 339 -----------KKRLEDHLPRLET--VLFQQQLGSLRDKTDRIQALAGWVASQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+D+L + I + P G KDP+ALRRA LG++RII+E ++ + L E Sbjct: 446 SAVACALAIADKMDSLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGTKLTNTKAVDEVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F S + KR+ ILA K +++ ++ L AE L + Sbjct: 566 AVSHFRSLDAAAALAAANKRVSNILA---KSTDKLNESVNAAVLKDAAEITLATHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V Sbjct: 623 DKLTPLFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|167630520|ref|YP_001681019.1| glycyl-tRNA synthetase, beta subunit [Heliobacterium modesticaldum Ice1] gi|167593260|gb|ABZ85008.1| glycyl-tRNA synthetase, beta subunit [Heliobacterium modesticaldum Ice1] Length = 691 Score = 630 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 217/729 (29%), Positives = 344/729 (47%), Gaps = 72/729 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA+ A L + L+E + Y + Y TP RL LY+K ++ Sbjct: 5 DLLLEIGTEEIPAKFIPSALAQLRQLAEKGLQEARLAYGAVETYGTPRRLTLYVKQVAAQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP V G KA GF RS G+ + + +D A+ + Sbjct: 65 QEDLRLEVKGPAVKAGFDKEGNPTKAAQGFARSQGVDVSA--LVTRDLAGVPYLYALRTE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R DVL ++ I + +PK MRW+ + RP++ I+ + E++ Sbjct: 123 SGRPARDVLPQLLQGCISGLSFPKPMRWA-----WGETRFARPIRWIVALY-----GEEV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++++ + G TYGHRF PI++ Y+ LE+A V+ DP R+ I L Sbjct: 173 IPVEVEGVQAGRTTYGHRFLGGGPIELTRPSEYLERLEKAYVIADPHKRKAMIWKQITEL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+AVG ++ ED+ LL+EI LVE+ G D Y+ LPE ++ +K +Q+ F ++ Sbjct: 233 AAAVGGQVAEDEGLLDEINYLVEYPTALCGEVDADYMHLPEAVLITPMKEHQRYFPVKSP 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V N ++ + + GN +V+ ARL DA F+ DQ Sbjct: 293 SGGLLPTFITVRNG-TAEHLSIVRAGNEKVLRARLADAAFFYAEDQ-------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD--- 412 PLD + +L +VF +GT ERV R + L +A ++ L + Sbjct: 338 ------KTPLDAQKEKLK--KIVFQESLGTVYERVEREQALTAFLADCMNVPAVLREGAL 389 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L+KADL T +V EFPELQG +G+ YA+L E AI EH +PR + VP+ Sbjct: 390 RAAELAKADLVTHMVYEFPELQGIMGERYALLSGEAPEVAQAIREHYQPRFSGDAVPSTM 449 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 V+LADK+D ++ ++I P+GS+DPYALRR G+ +II+ + + L+ IE Sbjct: 450 EGTLVALADKIDAIVGCFSIGIIPTGSQDPYALRRQAQGVCQIIMRGNLPLSLAAVIEKS 509 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ++L+ FF RL+ L + IR+D I+A+L D ++ Sbjct: 510 YNLYAAAGRPTRSLEETQKDLLEFFRQRLRFLLGEEGIRYDTIDAVLAEGFDQPAEVLKR 569 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 K L++F + + + R + S I P E LY + Sbjct: 570 AKALSDFRQAEAFSALITAYTRAANLAKKGG------SEPIRPDLFEQATEGELYKALQA 623 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++++ Y I + ++ ++ FFD V+V D+ +R+NRL+LL + + Sbjct: 624 AEEQVRQA--DGDYSTILAAVAALRPAVDAFFDAVMVMADEPVIRENRLALLNGVIGLTR 681 Query: 694 IVINVQKIV 702 V ++ K+V Sbjct: 682 GVADLSKLV 690 >gi|261344460|ref|ZP_05972104.1| glycyl-tRNA synthetase, beta subunit [Providencia rustigianii DSM 4541] gi|282567368|gb|EFB72903.1| glycyl-tRNA synthetase, beta subunit [Providencia rustigianii DSM 4541] Length = 689 Score = 630 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 194/720 (26%), Positives = 337/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L + L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDGADISHGAVTWFAAPRRLALKVANLAAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP + G KA +G+ R G+ ++ KG+ L + Sbjct: 65 QPDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVDQAERL--TTDKGEWLLYRAQM 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++L +V ++ K+P PK MRW+ + ++RP+ ++ +L ++ + Sbjct: 123 KGQAVSELLIDMVSRSLSKLPIPKLMRWADKET-----QFVRPVHTVTLLLGSD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 ++ ++ I G GHRF + + D Y L V+ D E R+ I D+ + Sbjct: 173 VEGEILGIKSGRTIRGHRFMGEAEFTIDNADQYPEILRERGKVIADYETRKATIKADSEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQALGGKADLTESLLEEVTSLVEWPVVLTAKFEEKFLDVPSEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 NAGKLMPNFIFVANIESSD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ R+ L IA I ADV RA Sbjct: 339 -------KQRLEDNLPRLET--VLFQQQLGTLRDKTDRLEALSGWIASKIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A++E +PR + +P+ +S Sbjct: 390 GLLAKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVALALKEQYQPRFAGDELPSTDVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 ++LA+K+DTL + I + P G KDP+ALRRA LG++RII+E + L + ++ Sbjct: 450 AALALAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKGYQLDLVEMTQEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L +K + Sbjct: 510 LYGDKLTNKNVVDDVVEFMLGRFRSWYQELGYSIDAIQAVLARRPTQPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + + + KR+ IL+ K + +++ + L E +L + + Sbjct: 570 FRSLDEAQALAAANKRVSNILS---KSDEKLADSVLASVLKTPEEVKLATHLVVLQDKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + L S+ E ++ FF V+V +D VR+NRL+LL ++ + L V ++ Sbjct: 627 PMFAERNYQEALVELASLREVVDEFFANVMVMDEDPAVRNNRLTLLSQLRELFLKVADIS 686 >gi|308188778|ref|YP_003932909.1| glycyl-tRNA synthetase, beta subunit [Pantoea vagans C9-1] gi|308059288|gb|ADO11460.1| Glycyl-tRNA synthetase, beta subunit [Pantoea vagans C9-1] Length = 689 Score = 630 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 201/722 (27%), Positives = 336/722 (46%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + + + + + + + P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAEAFAAQVTAEMDAANLSHGEVSWFAAPRRLALKVANLSAS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QPDREVEKRGPAVAAAFDADGNATKAAEGWARGNGITVDQAERLATD--KGEWLVYRAQV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L ++ A+ K+P PK MRW + ++RP+ ++ +L +++ Sbjct: 123 KGEAAQALLPAMIATALSKLPVPKLMRWGDSD-----VQFVRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I + I + GHRF I + + D Y LE+ V+ D + R+ I DA Sbjct: 173 IPGTILGIKSDRVIRGHRFMGESEITLDNADQYPDVLEKRGQVIADYQVRKAMIKADAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 233 AARRLGGNADISDSLLEEVTSLVEWPVVLTATFEEKFLKVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI V+NI++SD I+ GN +VV RL DA F+ D+ Sbjct: 293 NDGNLMPNFIFVTNIESSD-PRQIISGNEKVVRPRLADAEFFFNTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 339 -------KKRLEDNLPRLET--VLFQKELGTLRDKTDRIQTLAGWIAGEIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P++ ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSSPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++I F R + + + D ++A+L +K ++ Sbjct: 510 LYGSKLSNARVVDDVIDFMLGRFRTWYQEEGHSIDTLQAVLARRPTRPADFDARMKAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L E +L ++ + +Q Sbjct: 570 FRTLEAAAALAAANKRVSNILA---KSTETLNESVQASLLKENEEIQLATFVTALSSKLQ 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY L + ++ FFD+V+VN DD+ VR NRL+LL ++ + L V ++ Sbjct: 627 PYFAEGRYQDALVELAQLRTAVDNFFDKVMVNADDQAVRVNRLTLLSKLRELFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|261867209|ref|YP_003255131.1| glycyl-tRNA synthetase subunit beta [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412541|gb|ACX81912.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter actinomycetemcomitans D11S-1] Length = 693 Score = 630 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 210/727 (28%), Positives = 347/727 (47%), Gaps = 67/727 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATAFADNVQAELNQAGLAFDKIEWFAAPRRLAVKVLALATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QPGKEIEKRGPAVSAAFDAEGNPTKAAEGWARGCGITVDQAERLATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLADIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF ++Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASGRTIRGHRFLGEREFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR- 293 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPLYK 292 Query: 294 ----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 ++G L FI VSNI D +AI++GN +VV RL DA F+K D Sbjct: 293 KTEGDKDGKLLPHFIFVSNINPDD-PSAIIEGNEKVVRPRLTDAEFFFKTD--------- 342 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L + L R+ RL+ V+F ++GT ++ RI L IA+ I AD A Sbjct: 343 -----------LKQKLVDRLPRLET--VLFQQQLGTLRDKTDRIEQLAGAIAKQIGADEA 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P Sbjct: 390 KAKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + ++ V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 KSLVASAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLV 509 Query: 530 EDQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + +++ F R + + D I D+I+A+L + Sbjct: 510 QKSAALFGDKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARV 569 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + ++ F + E + KR+ ILA + EI+L + AEK L + Sbjct: 570 RAVSHFRTLDSAEALAAANKRVANILAKADVAIGEINLIA----CVESAEKNLAEAVLVL 625 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 T +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L Sbjct: 626 QTEVQPLIAKGEYTAVLDKLANLRTPVDNFFDNVMVNAEDPTLRQNRLAILNTLQGLFLQ 685 Query: 695 VINVQKI 701 V ++ + Sbjct: 686 VADISLL 692 >gi|261823642|ref|YP_003261748.1| glycyl-tRNA synthetase subunit beta [Pectobacterium wasabiae WPP163] gi|261607655|gb|ACX90141.1| glycyl-tRNA synthetase, beta subunit [Pectobacterium wasabiae WPP163] Length = 689 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 333/724 (45%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L +++ ++ + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRNLAESFAANFTAELDAANLVHGDVSWFAAPRRLALKVAR 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LNASQPDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVEQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRWS + ++RP+ ++ +L Sbjct: 119 RALAKGEQAQALLAGMVSTALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 E++I + I GHRF + S D Y + LE V+ D + R+ I Sbjct: 169 GEELIPGQVLGIHSARTIRGHRFMGEAEFTIDSADQYPQILLERGKVVADYDARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNSGNLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++G+ ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLET--VLFQQQLGSLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 AMRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+D+L + I + P G KDP+ALRRA LG++RII+E ++ + L E Sbjct: 446 SAVACALAIADKMDSLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGTKLTNTKAVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F S + KR+ ILA K ++ ++ L AE L + Sbjct: 566 AVSHFRSLDAAAALAAANKRVSNILA---KSTDTLNESVNAAVLKDAAEITLATHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V Sbjct: 623 DKLTPLFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|212711578|ref|ZP_03319706.1| hypothetical protein PROVALCAL_02653 [Providencia alcalifaciens DSM 30120] gi|212685680|gb|EEB45208.1| hypothetical protein PROVALCAL_02653 [Providencia alcalifaciens DSM 30120] Length = 689 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 193/722 (26%), Positives = 337/722 (46%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L ++ L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDSADITHGAVNWFAAPRRLALKVESLAAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP + G KA +G+ R G+ ++ KG+ L + Sbjct: 65 QPDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVDQAERL--TTDKGEWLLYRAQM 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++L +V ++ K+P PK MRW+ + ++RP+ ++ +L ++ I Sbjct: 123 KGQPVSELLIDMVSRSLAKLPIPKLMRWADKDT-----QFVRPVHTVTLLLGSD-----I 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 ++ ++ I I GHRF + + + Y L V+ D R+ I+ +A + Sbjct: 173 VNGEILGIKSDRIIRGHRFMGEAEFTIDNAEQYPEILRTRGKVIADYAERKAIIIANAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G + L+EE+ LVEW V F+ K+L +P E + T+K +QK F Sbjct: 233 AAKALGGKADLTDSLVEEVTSLVEWPVVLTAKFEDKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 DAGKLMPNFIFVANIESSD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ R+ L IA I ADV RA Sbjct: 339 -------KQRLEDNLPRLET--VLFQQQLGTLRDKTDRLEALAGWIASKIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A++E +PR + +P+ +S Sbjct: 390 GLLAKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVALALKEQYQPRFAGDELPSTDVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 ++LA+K+DTL + I + P G KDP+ALRRA LG++RII+E + L + ++ Sbjct: 450 AALALAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKGYQLDLVEMTQEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + + D I+A+L +K + Sbjct: 510 LYGDKLTNKNVVEDVVEFMLGRFRSWYQELGYSIDTIQAVLARRPTQPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + + + KR+ IL+ E+K ++ + L E +L + + Sbjct: 570 FRSLEEAQTLAAANKRVSNILSKSEEK---LADSVLASVLKTPEEVKLATHVVVLQDKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + L S+ E ++ FF V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PMFAERNYQEALVELASLREVVDEFFANVMVMDEDPAVRINRLTLLSQLRELFLKVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|290473327|ref|YP_003466193.1| glycine tRNA synthetase subunit beta [Xenorhabdus bovienii SS-2004] gi|289172626|emb|CBJ79395.1| glycine tRNA synthetase, beta subunit [Xenorhabdus bovienii SS-2004] Length = 689 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 204/722 (28%), Positives = 338/722 (46%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + LK + + + + P RL L + L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFEAELKNANLGHGEISWFAAPRRLALKVANLAVA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPTKAAEGWARGCGITVDQAERMVTD--KGEWLLYRAQV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +++L +V ++ K+P PK MRW + ++RP+ ++ +L ++ + Sbjct: 123 KGREAKELLADMVSSSLGKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 ID ++ I I GHRF + + + Y L+E V+ D R+ I DA + Sbjct: 173 IDGEILGIKSDRIIRGHRFMGEAEFAIDNAEQYPTILQERGRVIADYYARKALIKRDAEQ 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAMQLGGVADLTDSLLEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 KSGKLMANFIFVANIESSD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 339 -------KQRLEDNLLRLET--VLFQKQLGTLRDKTDRIQALAGWIAEKIGADVTHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ +S Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVALALNEQYQPRFSGDELPSTAVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L E+ Sbjct: 450 CAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLQTLAEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + ++ D I+A+L +K + Sbjct: 510 LYGDKLTNENVVDDVVEFMLGRFRTWYQEQGYSVDAIQAVLARRPTQPADFDARMKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E+K ++ + L E +L + + Sbjct: 570 FRTLDEAVSLAAANKRVSNILAKSEEK---LNDCVLASVLKAAEEIQLATHLVVLKDKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y L S+ E ++ FFD V+V +D++VR NRL+LL ++ + L V ++ Sbjct: 627 PLFAEGNYQDALVELASLREVVDAFFDNVMVMDEDQQVRINRLTLLSELRELFLRVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|238754024|ref|ZP_04615383.1| Glycyl-tRNA synthetase beta subunit [Yersinia ruckeri ATCC 29473] gi|238707776|gb|EEQ00135.1| Glycyl-tRNA synthetase beta subunit [Yersinia ruckeri ATCC 29473] Length = 689 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 201/722 (27%), Positives = 335/722 (46%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + + L + + ++ + P RL + + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANITAELDSANLSHGDVSWFAAPRRLAVKVANLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVDQAERLATD--KGEWLLYRAHI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 IGQSAQLLLAGMVSTALSKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + S + Y + LE V+ D E R++ I DA Sbjct: 173 IPGTVLGIHSNRVIRGHRFMGEAEFTIDSAEQYPQILLERGKVIADYELRKSIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 293 AAGNLMPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ RI+ L +A+ I ADV RA Sbjct: 339 -------KQRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAEQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +N+P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDNLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA+LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRASLGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + + D I+A+L +K ++ Sbjct: 510 LYGSKLTNGKVVDEVVEFMLGRFRAWYQEEGHSVDTIQAVLARRPTKPADFDARVKAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ ++ L AE +L + + Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDTLNDRVNAAVLKDSAELQLATHLVVLRDQLT 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PLFAEGRYQEALVELATLRENVDAFFDNVMVMAEDDAVRINRLTLLSKLRELFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|329297820|ref|ZP_08255156.1| glycyl-tRNA synthetase subunit beta [Plautia stali symbiont] Length = 689 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 335/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAEAFAAHFTAELDSAGLAHGDVSWFAAPRRLALKVAQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP V G KA +G+ R G+ ++ KG+ + Sbjct: 61 LAAAQPDREVEKRGPAVAAAFDAEGKPTKAAEGWARGNGITVEQAERL--STDKGEWLVH 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RTAVKGESAQALLPAMVATALSKLPIPKLMRWGASD-----VQFVRPVHTVTLLLS---- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +++I + I + GHRF + + + D Y + L+ V+ D R+ I Sbjct: 170 -DELIPATILGIQSDRVIRGHRFIGEPELTLDNADQYPQLLQERGKVIADYVTRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAQQLGGKADLSDRLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYAEDGQLLPNFIFVTNIESRD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDNLPRLET--VLFQKELGTLRDKTDRIQALAGWIAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 SPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGSKLSNANVVDDVIDFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K ++ + L AE +L ++ G Sbjct: 566 AVSHFRTLEAASALAAANKRVSNILA---KATETLNDSVQASLLKENAEIQLATFVTALG 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY L + E ++ FFD V+VN DD VR NRL+LL ++ + L V Sbjct: 623 DKLQPYFAEGRYQDALVELAQLREAVDNFFDNVMVNADDEAVRINRLTLLAQLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|227115350|ref|ZP_03829006.1| glycyl-tRNA synthetase subunit beta [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 689 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 204/724 (28%), Positives = 332/724 (45%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L + + ++ + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRNLAESFAANFTAELDAANLAHGDVSWFAAPRRLALKVAR 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LSASQPDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVEQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRWS + ++RP+ ++ +L Sbjct: 119 RAHAKGEQAQTLLAGMVSTALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 E++I + I GHRF + + + Y + LE V+ D + R+ I Sbjct: 169 GEELIPGQVLGIDSARTLRGHRFMGEAEFTIDNAEQYPQILLERGKVVADYDARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNSGNLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++G+ ++ RI+ L +A I ADV Sbjct: 339 -----------KKRLEDHLPRLET--VLFQQQLGSLRDKTDRIQALAGWVAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+D+L + I + P G KDP+ALRRA LG++RII+E ++ + L E Sbjct: 446 SAVACALAIADKMDSLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGDKLSNAKVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F S + KR+ ILA K ++ ++ L AE L + Sbjct: 566 AVSHFRSLDAAAALAAANKRVSNILA---KSTDTLNESVNAAVLKDAAEITLATHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V Sbjct: 623 DKLTPLFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|16762654|ref|NP_458271.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144141|ref|NP_807483.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213163579|ref|ZP_03349289.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428105|ref|ZP_03360855.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580726|ref|ZP_03362552.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609113|ref|ZP_03368939.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213649464|ref|ZP_03379517.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213854638|ref|ZP_03382878.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25009331|sp|Q8Z2B3|SYGB_SALTI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|25293205|pir||AI0980 glycine-tRNA ligase (EC 6.1.1.14) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504960|emb|CAD07973.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhi] gi|29139778|gb|AAO71343.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 689 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 203/726 (27%), Positives = 336/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAYVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNASVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|283787796|ref|YP_003367661.1| glycine-tRNA synthetase, beta subunit [Citrobacter rodentium ICC168] gi|282951250|emb|CBG90944.1| glycine-tRNA synthetase, beta subunit [Citrobacter rodentium ICC168] Length = 689 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 339/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGNVEWFAAPRRLALKVAK 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G++R G+ ++ KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWVRGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAEALLPNMVAASLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 + +I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDNVIPATILGIQSDRVIRGHRFMGEPQFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAIEAARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D IV GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIVSGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQTGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + ++ ++ L E L + Sbjct: 566 AVSHFRTLEAASALAAANKRVSNILA---KSDETLNERVNAATLKEPEEIALAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + EP++ FF++V+VNV+D+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPFFAEGRYQEALVELAELREPVDAFFEKVMVNVEDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|149912060|ref|ZP_01900651.1| glycyl-tRNA synthetase beta subunit [Moritella sp. PE36] gi|149804856|gb|EDM64893.1| glycyl-tRNA synthetase beta subunit [Moritella sp. PE36] Length = 690 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L+EI +EE+P + AE + LK+ G+ + ++ P RL L + Sbjct: 1 MATENLLIEIGTEELPPKSLRTLAEAFAANFQAELKKAGLEFADVSWMAAPRRLALTVTA 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ +K+ E+ GP + G KA G+ R G+ +IK D KG+ L Sbjct: 61 LADSQADKVIEKRGPAISVAFDADGNATKAAQGWARGNGITVEQAGRIKTD--KGEWLLH 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +V A+ K+P K MRW + S +IRP+ ++ + Sbjct: 119 KSEVKGQATQVLVADMVATALAKLPVSKPMRWGS-----SPIQFIRPVHTVTMLF----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 ++ + ++ I GHRF ++ D+Y+ LE+ V++D R+ I Sbjct: 169 GDEALAGEILGIKAARTIRGHRFLGKGDFELPHADNYVDLLEDHGMVMVDYARRKEVIRQ 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A G D+ LLEE+ LVEW +G+F+++YL +P E + T+K NQK F Sbjct: 229 QVIAAAEEHGGVAEIDEALLEEVTSLVEWPVTLVGNFEERYLDVPAEALIYTMKDNQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +++G L FI VSNI + D ++GN +VV RL DA F+ D+ Sbjct: 289 PMLSKDGELLPKFIFVSNIISKDVRQV-IEGNEKVVRPRLADAEFFFNTDK--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + L+ R+A L+ V+F ++GT E+ RI L IA I A+ Sbjct: 339 -----------KRTLESRLADLET--VIFQKQLGTLKEKSQRISDLAAAIAGKISANTEH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +L+KADL +++V EFP++QG +G YA E A+ E PR + +P Sbjct: 386 AQRAGLLAKADLMSDMVVEFPDVQGVMGMHYARNDGEAEEVAIALNEQYMPRYAGDRLPE 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +V+LADKLDTL+ + I + P G KDP+ALRRA +G +RII+E + + L ++ Sbjct: 446 SLVACSVALADKLDTLVGIFGIGQIPKGDKDPFALRRAAIGTLRIIIEKDLPLDLVDLVD 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +++ F R + D I D+I+A+L +K Sbjct: 506 TAKLLFGDKLSNQNVSTDVVAFILGRFPAWYKDAGISVDVIQAVLARRPTKPADFDKRVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + KR+ ILA K E++ + L +AEK L A + Sbjct: 566 AVNHFRGLDAAATLAAANKRVGNILA---KFEGELNTTVDTSLLQEDAEKALAAAVDAKV 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + Y Q L + + ++ FFD V+V DD ++ NRL+LL ++N L V Sbjct: 623 ELLTPLFAAGDYQQALTELSELRDVVDTFFDNVMVMADDEALKINRLTLLNTLRNQFLNV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|315125117|ref|YP_004067120.1| glycyl-tRNA synthetase subunit beta [Pseudoalteromonas sp. SM9913] gi|315013630|gb|ADT66968.1| glycyl-tRNA synthetase subunit beta [Pseudoalteromonas sp. SM9913] Length = 689 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 215/723 (29%), Positives = 345/723 (47%), Gaps = 62/723 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L+EI +EE+P + K AE + L L+ + +Q + Y +P RL L +K Sbjct: 1 MSAENLLVEIGTEELPPKSLRKLAEAFAANLTAELESLELAHQGVSWYASPRRLGLQVKA 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L +K E+ GP + G KA G+ R G++ ++ D KG L Sbjct: 61 LDAKQQDKEVEKRGPAIKAAFDAEGNPTKAAMGWARGCGIEVKDAQTLETD--KGAWLLH 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + + ++ + A+ K+P PK MRW + +IRP+ ++ +L +E Sbjct: 119 IAKVAGQETKLLMADAISKALAKLPIPKPMRWGANKT-----QFIRPVHTVTILLGSE-- 171 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I+ ++ N GHRFH P I + D L+ A V+ D E R+ I Sbjct: 172 ---LIEGEILGKQVSNQLQGHRFHHPEKISINHADDVFDVLKSAYVIADYEQRKAQIRAQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A AV + D+DLLEE+ LVEW +F++ +L +P E + T+K +QK F Sbjct: 229 IEDAAKAVNAVVAMDEDLLEEVTSLVEWPVTLTATFEEAFLDVPAEALIYTMKDDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L N F+ VSNI++ D + ++ GN +VV RL DA F++ D+ Sbjct: 289 LLDQNGKLLNKFLFVSNIESKD-PSVVISGNEKVVRPRLADAQFFFETDK---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 K L+ R+ LD V+F ++GT ++ RI L IA+ + AD AL Sbjct: 338 ----------KKTLESRLESLD--SVLFQKQLGTLKDKSQRISELAGYIAEQLGADKALA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EF ++QG +G YA E A E PR +N+PT+ Sbjct: 386 ARAGLLSKTDLMTEMVMEFTDVQGVMGMHYARHDGEAEDVAVAQNEQYMPRFAGDNLPTS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP------- 524 IS V++ADK DTL+ + I + P G KDP+ALRRA +G +RI++E ++ + Sbjct: 446 LISCAVAIADKFDTLVGIFGIGQAPKGDKDPFALRRAAIGALRIMVEKQLPLDILDLVAK 505 Query: 525 --------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 L+ ++ F R + + D I D+I+A+L + +K Sbjct: 506 SQTLFGEKLTNLNVSTDVFEFMLGRFRAWYQDEGIEVDVIQAVLARRPTKPVDFDRRVKA 565 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + E + KR+ ILA K N ++ L +AEK L + ++ F T Sbjct: 566 VSHFRTLDAAESLAAANKRVSNILA---KNNITTQGDVDQSLLSDDAEKVLASQVAKFAT 622 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + Y + L I + ++ FFD V+V DD V+ NRL+LL + + L + Sbjct: 623 DLAPLYSDGNYQEALSQLAGIRDSVDNFFDNVMVMADDEAVKQNRLALLSQLSGLFLEIA 682 Query: 697 NVQ 699 ++ Sbjct: 683 DIS 685 >gi|311277514|ref|YP_003939745.1| glycyl-tRNA synthetase, beta subunit [Enterobacter cloacae SCF1] gi|308746709|gb|ADO46461.1| glycyl-tRNA synthetase, beta subunit [Enterobacter cloacae SCF1] Length = 689 Score = 628 bits (1620), Expect = e-177, Method: Composition-based stats. Identities = 210/726 (28%), Positives = 334/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDSAGLAHGGVEWFAAPRRLALKVAA 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP V G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAESQPDREVEKRGPAVAQAFDASGHPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E Sbjct: 119 RAHVKGESAQALLPNMVATALAKLPIPKLMRWGASD-----VHFVRPVHTVTMLLGSE-- 171 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +I + I + GHRF + D Y + LE V+ D E R+ I Sbjct: 172 ---VIPATILGIASDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKATIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLKVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI + D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDAAGKLLPNFIFVANIVSKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RLD V+F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------KKRLEDHLPRLDT--VLFQQQLGTLRDKTDRIEALSGWIARQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGIMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NLVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLSLDLQSLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGEKLTNASVVDDVIDFMLGRFRAWYQDEGYAVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + KR+ ILA K + ++ ++ L E L I Sbjct: 566 AVTYFRTLDAASALAAANKRVSNILA---KSDEVLNERVNAATLKDPEEVALALQIVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + EP++ FF++V+V VDD+E+R NRLS+L+ ++ + L V Sbjct: 623 DKLEPYFAQGRYQEALVELAELREPVDAFFEKVMVMVDDKELRINRLSMLEKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|295098692|emb|CBK87782.1| glycyl-tRNA synthetase beta chain [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 689 Score = 628 bits (1619), Expect = e-177, Method: Composition-based stats. Identities = 203/726 (27%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKIEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAASQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAEALLPDMIATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 + +I + + + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDTVIPATILGVASDRVIRGHRFMGESEFTIDNADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEDAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D + I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PSQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIAELSGWIAREIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNAKVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + ++ ++ L E L + Sbjct: 566 AVSHFRTLEAASALAAANKRVSNILA---KSDETLNERVNAATLKEPEEISLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + + I+ FF++V+VNV+D+E+R NRLS+L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQEALVELAELRDVIDAFFEKVMVNVEDKELRINRLSMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|312968099|ref|ZP_07782310.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 2362-75] gi|312287358|gb|EFR15267.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 2362-75] Length = 682 Score = 628 bits (1619), Expect = e-177, Method: Composition-based stats. Identities = 203/718 (28%), Positives = 333/718 (46%), Gaps = 61/718 (8%) Query: 7 EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK 66 EI +EE+P + AE + L G+ + ++ + P RL L + L+ P++ Sbjct: 2 EIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDR 61 Query: 67 IEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 62 EIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLYRAHVKGES 119 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 E +L +V ++ K+P PK MRW + ++RP+ ++ +L +K+I Sbjct: 120 TEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL-----GDKVIPAT 169 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASA 238 + I + GHRF + + D Y L V+ D E R+ I DA A Sbjct: 170 ILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARK 229 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F +G Sbjct: 230 IGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYANDGK 289 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 290 LLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR----------------- 331 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA +LS Sbjct: 332 ---KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLS 386 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ ++ Sbjct: 387 KCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALA 446 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 +ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 447 IADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGD 506 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 ++I F R + + D D I+A+L +K ++ F + Sbjct: 507 KLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTL 566 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 567 EAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFA 623 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ + Sbjct: 624 EGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLL 681 >gi|292490092|ref|YP_003532987.1| glycyl-tRNA synthetase subunit beta [Erwinia amylovora CFBP1430] gi|292901099|ref|YP_003540468.1| glycine-tRNA synthetase subunit beta [Erwinia amylovora ATCC 49946] gi|291200947|emb|CBJ48086.1| glycine-tRNA synthetase, beta subunit [Erwinia amylovora ATCC 49946] gi|291555534|emb|CBA24085.1| Glycyl-tRNA synthetase, beta subunit [Erwinia amylovora CFBP1430] gi|312174286|emb|CBX82539.1| Glycyl-tRNA synthetase, beta subunit [Erwinia amylovora ATCC BAA-2158] Length = 689 Score = 628 bits (1619), Expect = e-177, Method: Composition-based stats. Identities = 201/726 (27%), Positives = 336/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L L G+ + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAESFAANLTAELDAAGLAHGEVSWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ KG+ + Sbjct: 61 LSAAQPDREVEKRGPAIQAAFDANGVATKAAEGWARGCGITVDQAERL--STDKGEWLMY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 R + +L ++ ++ K+P PK MRW S ++RP+ ++ +L Sbjct: 119 RARVTGERTQALLPAMIANSLTKLPIPKLMRWGA-----SEVQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +++I ++ + + GHRF + D Y + LE V D R+ I Sbjct: 169 GDELIPANILGVDSARVIRGHRFMGEPAFTIDHADQYPQILLERGKVQADYAARKATIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGVADLNDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDKAGKLLPNFIFVTNIESKD-PQQIISGNEKVVRPRLADAEFFFNSDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + L+ + RL+ V+F ++GT + RI+ L +A I ADV Sbjct: 339 -----------KRRLEDNLPRLET--VLFQKELGTLRAKTDRIQALSGWVAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDVLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLSE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +I F R + + + D ++A+L +K Sbjct: 506 EAVRLYGNKLSNAKAVDEVIDFMLGRFRAWYQEEGHSVDTLQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEQAASLAAANKRVSNILA---KATEPLNDSVQASLLKENEEIKLATYVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY + L + E ++ FFD+V+VN +++EVR NRL+LL ++ + L V Sbjct: 623 SKLQPFFAEGRYQEALIELAQLREAVDNFFDKVMVNAEEKEVRINRLTLLAKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|332304394|ref|YP_004432245.1| glycyl-tRNA synthetase, beta subunit [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171723|gb|AEE20977.1| glycyl-tRNA synthetase, beta subunit [Glaciecola agarilytica 4H-3-7+YE-5] Length = 692 Score = 628 bits (1619), Expect = e-177, Method: Composition-based stats. Identities = 204/720 (28%), Positives = 345/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K A+ + + L + Y ++ + +P RL + + L+ Sbjct: 5 NLLIEIGTEELPPKALCKLAQAFADNMQNALDAAELKYASVEWFASPRRLAVNVIDLAEQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ RS G+ ++ KG+ L Sbjct: 65 QEDKLIEKKGPAVSVAFDEAGQATKAAQGWARSNGITVEQAERL--TTDKGEWLLFKGES 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 I +L ++ A++K+P PK+MRW + S+ +IRP+ ++ + A+ + Sbjct: 123 KGETISSLLPPMIDGALKKLPIPKAMRWGS-----SSIQFIRPVHTVTILFGAD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++ I + GHRFH + + Y+ LE VL D R+ I Sbjct: 173 IKGNILGIDSDRVVQGHRFHGEKQFSLAHANDYLAQLEAHYVLADFAARKAKIQQQVKAT 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + +LL+E+ LVEW V SFD+ +L +P+E + T+K +QK F + Sbjct: 233 AQKENAVADMNDELLDEVTALVEWPVVLTASFDESFLEVPKEALIYTMKDDQKYFPLLDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L + F+ V+NI++ D I+ GN +V+ RL DA F+ D+ Sbjct: 293 NGQLKSRFVFVTNIESKD-PKQIISGNEKVIRPRLADAEFFFNTDK-------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L V+F ++GT E+ RI L IA ++D+D AL RA Sbjct: 338 ------KTTLESRLESLKT--VLFQKQLGTLYEKSQRIAELAGTIASMLDSDAALASRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFP++QG +G YA E+ + A+ E PR + +PT+ IS Sbjct: 390 LLSKTDLMTNMVMEFPDVQGVMGMHYAKNDGESDAVALALNEQYMPRFAGDQLPTSHISS 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LADK+DTL+ + I + P G KDP+ALRRA +G++RI +E K+ + L++ ++ Sbjct: 450 AVALADKIDTLVGIFGIGQVPKGDKDPFALRRAAIGVLRISVEMKLPLDLTELVQASIDS 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + D++I D+I+A+ I+ ++ Sbjct: 510 FADKLTHVDDLTSQVVDFILGRFRAWYQDQNIDIDVIQAVAARRPTKPADFAARIEAVSG 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + G + KR+ ILA K S I P E E L ++ + Sbjct: 570 FKRLSSGLALASANKRVANILA---KNKITGSTNIDPSLFESEHETALADALNSIEATVN 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ Y + D L ++ ++ FFD V+V +D +VR+NRL+LL ++ + L+V ++ Sbjct: 627 AFVNDANYQGVFDQLATLHVKVDDFFDNVMVMAEDEKVRNNRLALLSKLRTLFLLVADIS 686 >gi|300725252|ref|YP_003714581.1| glycine tRNA synthetase subunit beta [Xenorhabdus nematophila ATCC 19061] gi|297631798|emb|CBJ92519.1| glycine tRNA synthetase, beta subunit [Xenorhabdus nematophila ATCC 19061] Length = 694 Score = 627 bits (1618), Expect = e-177, Method: Composition-based stats. Identities = 203/722 (28%), Positives = 337/722 (46%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L + L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFEAELNNANLGHGEVSWFAAPRRLALKVANLAAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPTKAAEGWARGCGITVDQAERMVTD--KGEWLLYRAQV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +D+L +V ++ K+P PK MRW + ++RP+ ++ +L + + Sbjct: 123 KGREAKDLLAEMVSSSLGKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGRD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 +D ++ I I GHRF +++ + Y L+E V+ D E R+ I DA R Sbjct: 173 VDGEILGIKSDRIIRGHRFMGEAEFTIENAEQYPAILQERGRVIADYEARKAIIKRDAER 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G +LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAAQLGGVADLSDNLLEEVASLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++SD I+ GN +VV RL DA F+ D+ Sbjct: 293 NSGKLMANFIFVTNIESSD-PQQIISGNEKVVRPRLADAEFFFNTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 339 -------KQRLEDNLPRLET--VLFQKQLGTLRDKTDRIQALAGWIAEQIGADVEHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +V EF + QG +G YA E A+ E +PR +++P+ +S Sbjct: 390 GLLSKCDLMANMVFEFTDTQGVMGMHYARHDGEAEDVALALNEQYQPRFSGDDLPSTGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L E+ Sbjct: 450 CAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLQTLAEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L +K + Sbjct: 510 LYGDKLTNEKAVDDVVEFMLGRFRAWYQELGYSVDTIQAVLARRPTQPADFDARMKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E+K ++ + L E +L + + Sbjct: 570 FRTLDEAVSLAAANKRVSNILAKSEEK---LNDSVQASVLKAAEEIQLATHLVVLKEKLT 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y L S+ E ++ FFD V+V +D +VR NRL+LL ++++ L V ++ Sbjct: 627 PLFAESNYQDALVELVSLREVVDAFFDNVMVMDEDSQVRINRLTLLSELRDLFLRVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|227326603|ref|ZP_03830627.1| glycyl-tRNA synthetase subunit beta [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 689 Score = 627 bits (1618), Expect = e-177, Method: Composition-based stats. Identities = 202/724 (27%), Positives = 331/724 (45%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L + + ++ + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRNLAESFAANFTAELDAANLAHGDVSWFAAPRRLALKVAR 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LSASQPDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVEQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRWS + ++RP+ ++ +L Sbjct: 119 RAHAKGEQAQALLAGMVSTALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 E++I + I GHRF + + + Y + LE V+ D + R+ I Sbjct: 169 GEELIPGQVLGIDSARTIRGHRFMGEAEFTIDNAEQYPQILLERGKVVADYDARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNSGNLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++G+ ++ RI+ L +A I A+V Sbjct: 339 -----------KKRLEDHLPRLET--VLFQQQLGSLRDKTDRIQALAGWVAGQIGANVDH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 AKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+D+L + I + P G KDP+ALRRA LG++RII+E ++ + L E Sbjct: 446 SAVACALAIADKMDSLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGDKLSNAKVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F S + KR+ IL K ++ ++ L AE L + Sbjct: 566 AVSHFRSLDAAAALAAANKRVSNILT---KSTDTLNESVNAAVLKDAAEITLATHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V Sbjct: 623 DKLTPLFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|310765834|gb|ADP10784.1| glycyl-tRNA synthetase subunit beta [Erwinia sp. Ejp617] Length = 689 Score = 627 bits (1618), Expect = e-177, Method: Composition-based stats. Identities = 204/726 (28%), Positives = 334/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L L G+ + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAESFAANLTAELDAAGLAHGEVSWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ KG+ + Sbjct: 61 LSAAQPDREVEKRGPAIQAAFDANGVATKAAEGWARGCGITVDQAERL--STDKGEWLMY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 R + +L +V ++ K+P PK MRW S ++RP+ ++ +L Sbjct: 119 RARVTGERTQLLLPAMVATSLAKLPIPKLMRWGA-----SEVQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 ++++ ++ I GHRF + D Y + LE V D E R+ I Sbjct: 169 GDELVPANILGIDSARTLRGHRFMGEPAFTIDHADQYPQILLERGKVQADYEARKAIIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGVADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDKAGKLLPNFIFVTNIESKD-PQQIISGNEKVVRPRLADAEFFFNSDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + L+ + RL+ V+F ++GT + RI+ L +A I ADV Sbjct: 339 -----------KRRLEDNLPRLET--VLFQKELGTLRAKTDRIQALAGWVAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +I F R + + + D ++A+L +K Sbjct: 506 EAVRLYGNKLSNAKAVDEVIDFMLGRFRTWYQEEGHSVDTLQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEQAASLAAANKRVSNILA---KATEPLNDSVQASLLKENEEIKLATYVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + E ++ FFD+V+VN +D+EVR NRL+LL ++ + L V Sbjct: 623 SKLQPFFAEGRYQDALIELAQLRETVDNFFDKVMVNAEDKEVRINRLTLLARLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|259910253|ref|YP_002650609.1| glycyl-tRNA synthetase subunit beta [Erwinia pyrifoliae Ep1/96] gi|224965875|emb|CAX57408.1| Glycyl-tRNA synthetase beta subunit [Erwinia pyrifoliae Ep1/96] gi|283480370|emb|CAY76286.1| glyS [Erwinia pyrifoliae DSM 12163] Length = 689 Score = 627 bits (1618), Expect = e-177, Method: Composition-based stats. Identities = 201/726 (27%), Positives = 334/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L L G+ + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAESFAANLTAELDAAGLPHGEVSWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ KG+ + Sbjct: 61 LSAAQPDREVEKRGPAIQAAFDANGVATKAAEGWARGCGITVDQAERL--STDKGEWLMY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 R + +L ++ ++ K+P PK MRW S ++RP+ ++ +L Sbjct: 119 RARVTGERTQVLLPAMIATSLAKLPIPKLMRWGA-----SEVQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 ++++ ++ I GHRF + D Y + LE V + E R+ I Sbjct: 169 GDELVPANILGIDSARTLRGHRFMGEPAFTIDHADQYPQILLERGKVQANYEVRKAIIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGVADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDKAGKLLPNFIFVTNIESKD-PQQIISGNEKVVRPRLADAEFFFNSDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + L+ + RL+ V+F ++GT + RI+ L +A I ADV Sbjct: 339 -----------KRRLEDNLPRLET--VLFQKELGTLRAKTDRIQALAGWVAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +I F R + + + D ++A+L +K Sbjct: 506 EAVRLYGNKLSNAKAVDEVIDFMLGRFRTWYQEEGHSVDTLQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEQAASLAAANKRVSNILA---KATEPLNDSVQASLLKENEEIKLATYVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + E ++ FFD+V+VN +D++VR NRL+LL ++ + L V Sbjct: 623 SKLQPFFAEGRYQDALIELAQLRETVDNFFDKVMVNAEDKKVRINRLTLLAKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|254483305|ref|ZP_05096536.1| glycyl-tRNA synthetase, beta subunit [marine gamma proteobacterium HTCC2148] gi|214036400|gb|EEB77076.1| glycyl-tRNA synthetase, beta subunit [marine gamma proteobacterium HTCC2148] Length = 692 Score = 627 bits (1618), Expect = e-177, Method: Composition-based stats. Identities = 201/726 (27%), Positives = 344/726 (47%), Gaps = 61/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L+E+ +EE+P + + LK+ + + + + +P RL + + Sbjct: 1 MSNETLLIELGTEELPPKALKSLGLAFRDGITAGLKQRELGFGEVSWFASPRRLAVQIAQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + +K E LGP + G A GF + G+ +I+ KG Sbjct: 61 VQTQGEDKDIEVLGPPIDRARDSEGNWTPAASGFAKKQGVAAQDLQEIE--TPKGTRLGL 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + D L I+ I +P PK MRW S ++RP++ ++ +L Sbjct: 119 KKTEAGLHTSDCLNDIIVETIAGLPIPKRMRWGA-----SRVEFVRPVQWLIAML----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 EK + IP GN T GHRFH+ I ++ D Y L A V+ + + R+ I Sbjct: 169 GEKFDHGKILGIPTGNTTRGHRFHSSGDILLEKADDYEEVLANAHVVANFDKRQAMIREQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 ASAV V D DLL+E+ GLVEW GSF++++L +P E + ++K +QK F Sbjct: 229 VEAEASAVNASAVIDPDLLDEVTGLVEWPVALTGSFEERFLEVPAEALISSMKEHQKYFH 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI ++NI++ D ++ GN RV+ RL DA F++ D+ Sbjct: 289 LVDANGELKPNFITLANIESKD-PVQVIAGNERVIRPRLADAAFFFETDK---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 PL +R A+L+ V+F K+GT ++ R++ L +A++I AD Sbjct: 338 ----------KTPLAKRAAKLET--VIFQQKLGTLADKARRVQKLAGSLARMIGADADKA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +R+ +L+KADL T++V+EF ++QG G YA+ E+ AI + P+ + +P + Sbjct: 386 ERSALLAKADLVTDMVQEFSDMQGVAGSYYALHDGEDAEVAAAIAQQYWPKFAGDRLPES 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 + + LAD+LDTL+ + I + P+GSKDP+ALRRA+L ++RII+E K+++ L +E Sbjct: 446 NTACALGLADRLDTLVGIFGIGQPPTGSKDPFALRRASLAVLRIIVEKKLELDLRDCLEL 505 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + + +R + + + +I ++ A+ L I + Sbjct: 506 ATQQYPQDLLAEGTTDQVFDYMIERFRAWYEEENIPVEVFRAVSARRISQPLDIQQRVLA 565 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 +N F + + KR+ IL + N E+ L AEK L +S T Sbjct: 566 VNAFSQLPEASALAAANKRVSNIL--GKLSNDHSFGEVRVNLLQEAAEKELTENLSALST 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ Y L + P++ FFD+V+VN ++ +R+NRL+LL+ +++ L V Sbjct: 624 IASGHLEKGEYSAALASLAGLRAPVDRFFDEVMVNAENEALRNNRLNLLKALRDQFLEVA 683 Query: 697 NVQKIV 702 ++ ++V Sbjct: 684 DISQLV 689 >gi|167549108|ref|ZP_02342867.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325814|gb|EDZ13653.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 689 Score = 627 bits (1618), Expect = e-177, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|148545333|ref|YP_001265435.1| glycyl-tRNA synthetase subunit beta [Pseudomonas putida F1] gi|166227920|sp|A5VWJ1|SYGB_PSEP1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|148509391|gb|ABQ76251.1| Glycine--tRNA ligase [Pseudomonas putida F1] Length = 684 Score = 627 bits (1618), Expect = e-177, Method: Composition-based stats. Identities = 211/725 (29%), Positives = 344/725 (47%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + E + L+ G+ Y + Y P RL + ++ Sbjct: 1 MSAQDFLVELGTEELPPKALTSLGEAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P++ GP + G +A GF + G+ +I + K Sbjct: 61 LDVQQPDRSINIDGPPLQAAFNAEGEPTQAALGFAKKCGV---ELAEIDQSGPK---LRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + D+L TIV ++ +P PK MRW+ + ++RP + ++ +L Sbjct: 115 SQHIPGKATTDLLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 GDQVVDCTILSQKAGRESRGHRFHHPETVVITTPANYVEDLRKAHVLADFAERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TAELAMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D IVQGN +VV RL DA F+K+D+ Sbjct: 285 LLDSEGKLLPRFITVANIESRD-PKQIVQGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT ++ R+ L +A LI D Sbjct: 334 ----------KQPLETFNERLK--NVVFQAQLGTVYDKAERVSKLAAFVAPLIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 GRAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPQT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTGAVEF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F DRL+ D I ++ + + L ++ Sbjct: 502 AVKQFGAKVKAPGLADQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E KR+ +L+ E I+ ++ P+Y E LY+ I Sbjct: 562 VQAFRKLPEAEALAAVNKRVSNLLSKAE---GAIAEQVEPKYFDNANEFSLYSAIQQADQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V Sbjct: 619 AVQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|304415609|ref|ZP_07396219.1| glycine tRNA synthetase beta subunit [Candidatus Regiella insecticola LSR1] gi|304282541|gb|EFL91094.1| glycine tRNA synthetase beta subunit [Candidatus Regiella insecticola LSR1] Length = 690 Score = 627 bits (1617), Expect = e-177, Method: Composition-based stats. Identities = 201/722 (27%), Positives = 335/722 (46%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + A+ + I L + + + N++ + TP RL L + LS Sbjct: 6 TFLVEIGTEELPPKALRSLAQSFADHFITELNDAHLSHGNLKWFATPRRLALQVTDLSTT 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++I E+ GP + G KA + + G+ +++ +KG+ L + Sbjct: 66 QADRIIEKRGPAITQAYDALGKATKAAESWACGCGITLDQAERLR--TEKGEWLLYRAQI 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L +V A+ K+P PK MRW + ++RP+ ++ +L ++ Sbjct: 124 KGQSATSLLPRLVNTALSKLPIPKLMRWGDKST-----QFVRPVHTVTLLL-----GNEL 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILNDAHR 234 I L + + GHRF + + + + Y L V+ D E R+ I + + Sbjct: 174 IPGTLLGVDSARLIRGHRFMGEATLTLDNAEQYRQILLTRGSVIADYETRKAQIKSQIEQ 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G D+DLLEE+ LVEW V SF+KK+L +P E + T+K +QK F Sbjct: 234 TAQTLGGIADIDEDLLEEVTSLVEWPVVLTASFEKKFLLVPAEALVHTMKADQKYFPVYD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L++ FI V+NI + D I+ GN +V+ RL DA F+ D+ Sbjct: 294 QVGQLSSNFIFVANIASKD-PQQIIAGNEKVIRPRLADAEFFFNTDRQ------------ 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 KPL + RL+ V+F ++GT ++ RI L IA+ I AD+ RA Sbjct: 341 --------KPLLDYLPRLE--SVLFQQQLGTLRDKTDRISALSGWIAEQIGADIPHAIRA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF E QG +G YA E+ A+ E PR + +P+ +S Sbjct: 391 GLLSKCDLMTNMVFEFTETQGMMGMHYARHDGEDEQVALALYEQYLPRFSGDLLPSKPVS 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL+ + I + P G KDP+ALRRA LG++RII NK+ + L + Sbjct: 451 CALAIADKIDTLVGIFGIGQPPKGDKDPFALRRAALGVLRIITLNKLPLDLQTLSQQAER 510 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + + D I+A+L IK ++ Sbjct: 511 LYGSKLINKKGVNEVVEFMLGRFRAWYQEEGHSVDTIQAVLACHPTKPADFDARIKAVSH 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K + ++ L AE L + ++ Sbjct: 571 FRTLDAAVALTAANKRVSNILA---KSTDILPDDVDVSLLTDPAELTLATDLIALSDQLE 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY + L ++ E ++ FFD V+V V+D +R NRL+LL ++ + L + ++ Sbjct: 628 PLFASGRYQEALSKLAALREVVDRFFDNVMVMVEDNSMRINRLTLLNKLRALFLKIADIS 687 Query: 700 KI 701 + Sbjct: 688 LL 689 >gi|168232493|ref|ZP_02657551.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194468955|ref|ZP_03074939.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455319|gb|EDX44158.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333256|gb|EDZ20020.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 689 Score = 627 bits (1617), Expect = e-177, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|296100579|ref|YP_003610725.1| glycyl-tRNA synthetase subunit beta [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055038|gb|ADF59776.1| glycyl-tRNA synthetase subunit beta [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 689 Score = 627 bits (1617), Expect = e-177, Method: Composition-based stats. Identities = 202/726 (27%), Positives = 336/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKIEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAASQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGERAEALLPNMIATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 + +I + + + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDTVIPATILGVASDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIAELSGWIAREIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + ++ ++ L E L + Sbjct: 566 AVSHFRTLEAASALAAANKRVSNILA---KSDETLNERVNAATLKEPEEIALAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + + I+ FF++V+VNV+D+++R NRLS+L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQEALVELAELRDVIDAFFEKVMVNVEDKDLRINRLSMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|253690527|ref|YP_003019717.1| glycyl-tRNA synthetase, beta subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259511928|sp|C6DII7|SYGB_PECCP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|251757105|gb|ACT15181.1| glycyl-tRNA synthetase, beta subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 689 Score = 627 bits (1617), Expect = e-177, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 331/724 (45%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L + + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRNLAESFAANFTAELDAANLAHGEVSWFAAPRRLALKVAR 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LSASQPDREVEKRGPAIAQAFDAEGKTTKAAEGWARGCGITVEQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L ++ A+ K+P PK MRWS + ++RP+ ++ +L Sbjct: 119 RAHAKGEQAQALLAGMISTALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +++I + I GHRF + S D Y + LE V+ D + R+ I Sbjct: 169 GDELIPGQVLGIHSARTLRGHRFMGEAEFTIDSADQYPQILLERGKVVADYDARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNSGNLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV Sbjct: 339 -----------KKRLEDHLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E ++ + L E Sbjct: 446 SAVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGAKLTNANVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F S + KR+ ILA K ++ ++ L AE L + Sbjct: 566 AVSHFRSLDAAAALAAANKRVSNILA---KSTDTLNESVNAAVLKDAAEITLATHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V Sbjct: 623 DKLTPLFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|23013833|ref|ZP_00053688.1| COG0751: Glycyl-tRNA synthetase, beta subunit [Magnetospirillum magnetotacticum MS-1] Length = 688 Score = 627 bits (1617), Expect = e-177, Method: Composition-based stats. Identities = 274/720 (38%), Positives = 415/720 (57%), Gaps = 53/720 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI+SEEIPARMQ +AA+DL ++ L + G+ + +R Y TP RL L ++GL Sbjct: 1 MAEFLLEIFSEEIPARMQARAADDLRGMVTDGLAKNGITFDAVRSYVTPRRLVLVIEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EE+ GPRVG+ +A++GFL+STG+ Q +D KG Y AV+ + R Sbjct: 61 LAGPDVSEEKRGPRVGSPAQAMEGFLKSTGMSVEQLEQ--RDTGKGVFYFAVINRKGRPT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL +V + PWPKS RW ++ W+RP++SIL + ++ ++ Sbjct: 119 AEVLSEVVEATMAAFPWPKSQRWGA-----NSIRWVRPIQSILALFEG-----HVVPVEF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 G++T GHRF AP +V+ Y+ L A V+LDP RR+AIL+ A LA+A G Sbjct: 169 GPAKSGDMTCGHRFLAPESFRVKDFADYLARLRHAKVMLDPVERRHAILSGAEALAAAEG 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L L D LL E+ GLVEW +GS D K++ +P E++ +++ +QK F +G LA Sbjct: 229 LTLKADDGLLAEVTGLVEWPVPLVGSIDDKFMDVPAEVLITSMRAHQKYFSLLKADGSLA 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 + F+++SN++ +DGG+A+V GN RV+ ARL DA FW D+ Sbjct: 289 SRFVVISNMETTDGGSAVVAGNQRVLRARLSDAKFFWDTDR------------------- 329 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + L+ R+ +L F+A +GT ++V RI L IA +I AD AL +RA L+KA Sbjct: 330 -KQRLESRLPKLAER--TFYASLGTVADKVERIAGLAGNIADMIGADKALAERAARLAKA 386 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA+ EN DAI H P+GP ++ PT +S+ V+LA Sbjct: 387 DLSSELVGEFPELQGLMGRYYALNDGENPLVADAIAAHYAPQGPSDSCPTAPVSVAVALA 446 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---------- 530 DK+D+L+ F+AINE+P+GSKDP+ALRRA LGIIR++LEN + +PLSQ I Sbjct: 447 DKIDSLVGFFAINERPTGSKDPFALRRAALGIIRLVLENGLRLPLSQVIFLASGHFKATL 506 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFFS 582 ++L+ FF DRL + L ++ +RHDLI AI D+L+ ++ + L F + Sbjct: 507 VQAPGEVARDLLNFFADRLAVALKEKGVRHDLITAIFSLGGEDDLVRLLKRVDALGAFLA 566 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S G L++ +R I+ IEEKK+ + + L + EK L +S G ++ + Sbjct: 567 SDDGANLLIAYRRAANIVRIEEKKDATLFTGSADLALLRQDEEKALELALSKVGQEVKNA 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + L + P++ FFD+V VN D+ ++R NRL LL I + + + + K+ Sbjct: 627 LATEDFAAAMAALARLRRPVDAFFDKVTVNADEADLRVNRLKLLAMIGSAMGGLADFSKV 686 >gi|157368319|ref|YP_001476308.1| glycyl-tRNA synthetase subunit beta [Serratia proteamaculans 568] gi|166980041|sp|A8G7U0|SYGB_SERP5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157320083|gb|ABV39180.1| glycyl-tRNA synthetase, beta subunit [Serratia proteamaculans 568] Length = 689 Score = 627 bits (1617), Expect = e-177, Method: Composition-based stats. Identities = 201/720 (27%), Positives = 325/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAEAFAANFTAELDSANLEHGEVSWFAAPRRLALKVANLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V ++ K+P PK MRW + ++RP+ ++ +L AE + Sbjct: 123 KGQSAQALLAGMVSNSLAKLPIPKLMRWGDSD-----VQFVRPVHTVTMLLGAE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I GHRF + + D Y + LE V+ D E R+ I DA Sbjct: 173 IPGTVLGIDSARTVRGHRFMGEAEFTIDNADQYPQILLERGKVIADYETRKAMIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 AS +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AASTIGGKADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 AAGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 339 -------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAGQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPESLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 ++++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CSLAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLTLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + + D I+A+L +K + Sbjct: 510 LYGSKLTNAKVVDEVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTKPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLEAAAALAAANKRVSNILA---KSTDTLNDRVHASVLKEAAEIQLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y L + EP++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PYFAAGNYQDALVELADLREPVDAFFDNVMVMAEDEAVRVNRLTLLSKLRELFLQVADIS 686 >gi|261341815|ref|ZP_05969673.1| hypothetical protein ENTCAN_08299 [Enterobacter cancerogenus ATCC 35316] gi|288316188|gb|EFC55126.1| glycyl-tRNA synthetase, beta subunit [Enterobacter cancerogenus ATCC 35316] Length = 689 Score = 627 bits (1616), Expect = e-177, Method: Composition-based stats. Identities = 203/726 (27%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKIEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAASQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAEALLPNMIATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 + +I + + + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDTVIPATILGVASDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARQIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-PTQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIAELSGWIAREIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNAKVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + ++ ++ L E L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDETLNERVNAATLKEPEEIALAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + E I+ FF++V+VNV+D+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPFFAEGRYQEALVELSELREAIDAFFEKVMVNVEDQELRINRLTMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|168465046|ref|ZP_02698938.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168818524|ref|ZP_02830524.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|195632214|gb|EDX50698.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205344573|gb|EDZ31337.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088072|emb|CBY97834.1| Glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 689 Score = 627 bits (1616), Expect = e-177, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PTQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|260914511|ref|ZP_05920980.1| glycyl-tRNA synthetase [Pasteurella dagmatis ATCC 43325] gi|260631612|gb|EEX49794.1| glycyl-tRNA synthetase [Pasteurella dagmatis ATCC 43325] Length = 689 Score = 627 bits (1616), Expect = e-177, Method: Composition-based stats. Identities = 212/722 (29%), Positives = 352/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVELELNQAGLTFDKVEWFAAPRRLAVKVLGLATS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + Sbjct: 65 QPSKQIEKRGPAVSAAFDSEGKPTKAAEGWARGCGINVEQAERIATD--KGEWLVHRATI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++LK IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLKDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF H ++ D Y L+E V+ D R+ IL A Sbjct: 173 IEGEILGVTSGTTIRGHRFLGEHEFQISHADQYPALLKEKGSVVADFNERKALILAKAQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KEGKLLPHFIFVSNINPED-PSKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I ++P GS DP+ALRRA LG++RII+E + + L + ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQQPKGSADPFALRRAALGVLRIIVEKNLPLDLEEIVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D I D+I+++L ++ ++ Sbjct: 510 LFGDRLTNANVVEEVVDFMLGRFRAWYQDEGIAVDVIQSVLARRPTKPSDFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K E+ I + EK L + + Sbjct: 570 FRTLEAAEALAAANKRVSNILA---KVEGELPATIDTVLCVENTEKVLAEQVIALQAELT 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y D L ++ EP++ FFD V+VNV+D+++R NRL++L ++N+ L V ++ Sbjct: 627 PLFAKGEYQVALDRLAALREPVDTFFDNVMVNVEDQKLRQNRLAILNNLRNLFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|313647572|gb|EFS12022.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri 2a str. 2457T] Length = 682 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 203/718 (28%), Positives = 333/718 (46%), Gaps = 61/718 (8%) Query: 7 EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK 66 EI +EE+P + AE + L G+ + ++ + P RL L + L+ P++ Sbjct: 2 EIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDR 61 Query: 67 IEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 62 EIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLYRAHVKGES 119 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 E +L +V ++ K+P PK MRW + ++RP+ ++ +L +K+I Sbjct: 120 TEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL-----GDKVIPAT 169 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASA 238 + I + GHRF + + D Y L V+ D E R+ I DA A Sbjct: 170 ILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARK 229 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F +G Sbjct: 230 IGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGK 289 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 290 LLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR----------------- 331 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA +LS Sbjct: 332 ---KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLS 386 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ ++ Sbjct: 387 KCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALA 446 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 +ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 447 IADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGD 506 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 ++I F R + + D D I+A+L +K ++ F + Sbjct: 507 KLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTL 566 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 567 EAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFA 623 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ + Sbjct: 624 EGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADISLL 681 >gi|168235257|ref|ZP_02660315.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736702|ref|YP_002116587.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|238689772|sp|B4TZ49|SYGB_SALSV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|194712204|gb|ACF91425.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291494|gb|EDY30846.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 689 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PTQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|198244903|ref|YP_002217613.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205354738|ref|YP_002228539.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858892|ref|YP_002245543.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238690327|sp|B5FLC9|SYGB_SALDC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238690461|sp|B5R4P2|SYGB_SALEP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238690542|sp|B5RGM2|SYGB_SALG2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|197939419|gb|ACH76752.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205274519|emb|CAR39556.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710695|emb|CAR35056.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326625398|gb|EGE31743.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629878|gb|EGE36221.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 689 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 337/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLSVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PTQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|39995686|ref|NP_951637.1| glycyl-tRNA synthetase subunit beta [Geobacter sulfurreducens PCA] gi|81832117|sp|Q74FM7|SYGB_GEOSL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|39982449|gb|AAR33910.1| glycyl-tRNA synthetase, beta subunit [Geobacter sulfurreducens PCA] gi|298504697|gb|ADI83420.1| glycyl-tRNA synthetase, beta subunit [Geobacter sulfurreducens KN400] Length = 687 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 216/727 (29%), Positives = 341/727 (46%), Gaps = 68/727 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LEI +EEIPA KA D+ I+ L+ + + ++ + TP RL L +KGL Sbjct: 1 MSKELFLEIGTEEIPAGFLPKAMADMEAIVTKELENARLAFGEVKTFATPRRLALVVKGL 60 Query: 60 SPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 P+ LGP G KA +GF R G+ S + +KG+ AV Sbjct: 61 PTVQPDAEITALGPARNIAFGPDGTPSKAAEGFARGQGVDVASLTLV--STEKGEYVAAV 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ R + D+L I+P + +P+ KSMRW+ + RP+ I+ + Sbjct: 119 RKESGRPVPDLLAEILPRLVGGIPFRKSMRWADLD-----VRFARPIHWIVALF-----D 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ + GN++ GHRF A P V+ HY+ + E V+ DPE R+ I + Sbjct: 169 GVVVPFAFGNVQSGNVSRGHRFMANQPFPVRDFAHYLDECERHFVIPDPERRKETIRREI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 HR+A G L+ D+ LL+E+ LVE+ V G+F +L +P E++ +++++Q+ F Sbjct: 229 HRVAKTAGGHLLPDEGLLDEVAYLVEYPSVVHGTFSPDFLKVPREVLITSMRSHQRYFSI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI ++N D + +V+GN RV+ ARL DA F++ DQ Sbjct: 289 VDDAGKLMPGFITINNTLTED-PSVVVKGNERVLRARLSDARFFFEEDQ----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALV 411 L+ R+ L +VV+ K+GT E++ R R L + +A L++ A A Sbjct: 337 ---------KVKLETRVESLK--NVVYQQKLGTSYEKMERFRALAEGLADLLNPAVKAKT 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L KADL + +V EFPE+QG +G+EYA+LQ E+ AI EH P ++P + Sbjct: 386 SRAAFLCKADLVSGMVGEFPEVQGIMGREYALLQGEDAEVAAAIAEHYLPTQAGGDLPAS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS----- 526 I VS+ADKLDT+ + + P+GS DPYALRR+ LGII IIL+ + L Sbjct: 446 DIGAFVSIADKLDTICGCFGVGLIPTGSADPYALRRSALGIINIILDRGCRLSLEGEIGK 505 Query: 527 ------------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +++ FF R + DR D ++A + D+L+ I Sbjct: 506 ALELLSAKLTRPAAEVMADVLEFFRGRFVNLMADR-YPADAVDAAIAAGFDDLVDAEARI 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 L F + ++ KR+ I+ + + AE L+A Sbjct: 565 GALAAFKGRPDFDSLAVAFKRVCNIVK------DGVDQPVDAALFQEPAEGALFAAFQQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ Y + ++ ++ FFD+V+V +D VR NRL+LL I + Sbjct: 619 RADVEARTASGDYLAALTGIAALKGAVDDFFDKVMVMAEDERVRTNRLALLTGIARLFGG 678 Query: 695 VINVQKI 701 V + KI Sbjct: 679 VADFAKI 685 >gi|146223|gb|AAA23915.1| glycyl-tRNA synthetase beta subunit [Escherichia coli] Length = 689 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 206/723 (28%), Positives = 338/723 (46%), Gaps = 61/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 4 KTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAE 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 64 AQPDREIEKRGPAIAQAFDAEGKPSKAPEGWARGCGITVDQAERL--TTDKGEWLLYRAH 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 E +L +V ++ K+P PK MRW SA +++RP+ ++ +L +K Sbjct: 122 VKGESTEALLPNMVATSLAKLPIPKLMRWGA-----SAAAFVRPVHTVTLLL-----GDK 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAH 233 +I + I + GHRF + + D Y L + V+ D E R+ I DA Sbjct: 172 VIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRDGGKVIADYEERKAKIKADAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 EAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 292 ANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR------------ 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 K + + RL V+F ++GT ++ RI+ L IA+ I ADV R Sbjct: 339 --------KKRDEDNLPRLQT--VLFQQQLGTVRDKTDRIQALAGWIAEQIGADVNHATR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 449 ACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAV 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++I F R + + D D I+A+L +K ++ Sbjct: 509 RLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + KR+ ILA K + +S ++ L E +L + + Sbjct: 569 HFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 626 EPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 Query: 699 QKI 701 + Sbjct: 686 SLL 688 >gi|89092284|ref|ZP_01165238.1| glycyl-tRNA synthetase beta subunit [Oceanospirillum sp. MED92] gi|89083372|gb|EAR62590.1| glycyl-tRNA synthetase beta subunit [Oceanospirillum sp. MED92] Length = 682 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 199/715 (27%), Positives = 347/715 (48%), Gaps = 56/715 (7%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ +EE+P + ++ + + LKE GV + +++ Y +P RL + + L Sbjct: 4 HDFLVELGTEELPPKALKTLSDAFTSGITAGLKEAGVNFGDVKSYASPRRLAVLISALDD 63 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 ++ E+ GP V A +KA++GF RS G+ +I D KG+ Y + + Sbjct: 64 KQADREIEKRGPSVKAPEKAVEGFARSCGVTIDQLEKI--DTNKGEYYNFKNTEEGKATS 121 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 +L +V ++ K+P PK MRW S ++RP+ ++ + ++++D ++ Sbjct: 122 SLLPELVETSLNKLPIPKRMRWGA-----SRVEFVRPVHWLVMLF-----GDEVVDCEIL 171 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVG 240 + G T GHRFH I++ + Y L MV+ D + R+ I + Sbjct: 172 GLTSGRKTRGHRFHYNQEIELIAPSEYADRLENPGMVIADYDIRKAMINEQVKAEGDKLN 231 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 D+DLL+E+ L EW G F++++L +P + + ++K +QK F G L Sbjct: 232 AVAQIDEDLLDEVTALNEWPVALTGRFEERFLEVPAQALISSMKEHQKYFHHLDANGNLL 291 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F + NI + D +++GN +V+ RL DA F++ D+ Sbjct: 292 PNFTTICNIVSKD-PQQVIEGNEKVIRPRLSDAAFFFETDK------------------- 331 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ R+ +L +VF +GT ++ +RI L KIA ++ D A +RA +L K Sbjct: 332 -KTTLESRVEKLKT--IVFQKDLGTVYDKAARISALSGKIAATLNQDQAKAERAGLLCKT 388 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T++V EF +LQG +G YA+ E+ A E PR + +P + V++A Sbjct: 389 DLLTDMVYEFTDLQGLMGYHYALNDGEDQDVALAQNEQYMPRFAGDELPQTAPGVAVAIA 448 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----------------ENKIDIP 524 D+LDTL + IN+ P+GSKDP+ALRRA LG++RII+ N D+P Sbjct: 449 DRLDTLTGLFGINQPPTGSKDPFALRRAALGVLRIIVERELDLDLRELLTIAANNHNDLP 508 Query: 525 LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + +E ++ F +R + + D DI ++ ++L + L +K +N F S A Sbjct: 509 AREGLE-DKVLDFMLERFRAWYEDADINAEVFLSVLALKPSRPLDFDRRVKAVNHFRSLA 567 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + E + KR+ IL+ K+ + +++ + L AEK L A I + Sbjct: 568 EAEALAAANKRVSNILS---KQGVTGTTDVNNELLTEAAEKALAADIEAQKAALAPLFAE 624 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + + L + + FF+ V+V +D V++NRL+LL ++ + L V ++ Sbjct: 625 GKYQEALESLAGLRASTDAFFEDVMVMAEDEAVKNNRLALLSQLRALFLGVADIS 679 >gi|254463281|ref|ZP_05076697.1| glycyl-tRNA synthetase, beta subunit [Rhodobacterales bacterium HTCC2083] gi|206679870|gb|EDZ44357.1| glycyl-tRNA synthetase, beta subunit [Rhodobacteraceae bacterium HTCC2083] Length = 685 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 283/710 (39%), Positives = 406/710 (57%), Gaps = 36/710 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ + E G+ Y + + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQGRAADDLKKLMTDGMVEAGLTYASAAAFSTPRRLCLTVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR GL D ++D KG VY A K R Sbjct: 61 AESPTVREERKGPKVGAPDKAIEGFLRGAGLT--RDKLEERDTSKGAVYFASFEKQGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL SILC+L E + +++ LD+ Sbjct: 119 PEIIAEVLEQTIRTFPWPKSMRWG-----TGSLRWVRPLHSILCVLSDEASS-EVVPLDV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP+ I V + Y L+ A V+L+ R +AI DA A A G Sbjct: 173 DGITSGKATYGHRFMAPNQITVNGFEDYEAQLKRAFVVLNAGERADAIWEDAKNQAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG + +L LP E+++ ++K +QK F + + Sbjct: 233 LEVVEDAGLLREVAGLVEWPVVLMGEIAEDFLGLPPEVLQTSMKEHQKFFSVKNAKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + D GA I+ GN +V+ ARL DA FW+ D + + +A Sbjct: 293 ERFITVANRETVDNGATILAGNQKVLFARLSDAKFFWENDLRVATSDMASWTAA------ 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+GTQ ER+ RI L +++A ++ AD +RA L+KA Sbjct: 347 -------------LSNVTFHNKLGTQAERIERIAALARELAPVVGADADEAERAAKLAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA E + A EEH P GP + VPT +S+ VSLA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYAEAAGETAAVAAAAEEHYAPLGPSDAVPTAPVSVAVSLA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------EDQN 533 DK+DTL FWAI+EKP+GSKDP+ALRRA LGIIR++LEN + I + + Sbjct: 454 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGIIRLVLENDLTIRSKPLFTKADMRADSDD 513 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ FFHDRLK+YL D+ +RHD+I+A + ND+L +V L F + G L Sbjct: 514 LLSFFHDRLKVYLRDQGVRHDVIDACIAMEGNDDLALLVKRAVALEAFLKTEDGTNLLQG 573 Query: 593 AKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR IL+ EE K+ E S ++ E E+ L+A ++ G I+ ++ + + Sbjct: 574 FKRANNILSKEEDKDGVEYSYGGDVKFAETEEERALFAALTAEGPAIETALKAEDFAGAM 633 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + PI+ FF+ V VN D++ VR NRL+LL I+ ++ V ++ ++ Sbjct: 634 SGMAGLRAPIDAFFEAVQVNSDNQTVRRNRLNLLSDIRKLVGSVADLSRV 683 >gi|308047728|ref|YP_003911294.1| glycyl-tRNA synthetase beta chain [Ferrimonas balearica DSM 9799] gi|307629918|gb|ADN74220.1| glycyl-tRNA synthetase beta chain [Ferrimonas balearica DSM 9799] Length = 697 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 204/729 (27%), Positives = 345/729 (47%), Gaps = 68/729 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + ++ L + Y ++ + +P RL + + L+ Sbjct: 5 TFLVEIGTEELPPKALRTLAESFAANMVDSLNAAELPYGDLTWFASPRRLAIKVSALAAQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ RS G+ +I D KG+ L Sbjct: 65 QADKIVEKRGPAVQAAFDADGNPTKAAEGWARSNGITVAEAGRIATD--KGEWLLHKAEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L +V A+ K+P PK MRW + +IRP++++ +L E + Sbjct: 123 KGQSAAELLPQMVSEALAKLPIPKPMRWGAYDT-----QFIRPVQTVTLML-----GEHL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + + GN GHRF + ++ + Y LEE V+ D E R+ I+ D Sbjct: 173 LPATILGKASGNTLLGHRFMGEQVLTIEHAEQYPALLEEQGKVIADYERRKAKIVADIQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G D +LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAEIGGHADLDDELLEEVTSLVEWPVVLTASFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI VSN+++ D A ++ GN +VV RL DA F++ D+ Sbjct: 293 AEGKLLPKFIFVSNLESKD-PAVVIAGNEKVVRPRLADAEFFFETDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ RI+ L + IA LI AD A RA Sbjct: 339 -------KQTLESLLPRLET--VLFQKQLGTLKDKTDRIQALAEHIAGLIGADRAHAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSK DL T +V EF + QG +G YA E + A+ E +PR + +P++ ++ Sbjct: 390 GQLSKCDLMTNMVFEFTDTQGIMGMHYARHDGEAEAVAVALNEQYQPRFAGDELPSSGVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 +++ADK+D+L+ + I + P KDP+ALRRA +GI+RI ++ + + L Sbjct: 450 QALAIADKMDSLVGIFGIGQPPKADKDPFALRRAAIGILRIAVDKALPLDLFDLAAFSYS 509 Query: 531 ------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 ++ F R + + + D+I+A+L + Sbjct: 510 LFAEQEKLDADGKKGAEICNQVVDFMLGRFRAWYQEEGFPADVIQAVLAVRPTRPVDFDR 569 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 +K + F S E + KR+ ILA K I+ ++ L +AEK L +++ Sbjct: 570 RVKAVQHFRSLDAAEALAAANKRVGNILA---KVEGPIADQVDAALLQDDAEKVLADIVA 626 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ Y L + EP++ FF+ V+VN +D +R NR +LL+ ++ + Sbjct: 627 QVAAKVEPMFAAGDYQNALLALADLREPVDAFFEAVMVNAEDPALRANRQALLKQLRQLF 686 Query: 693 LIVINVQKI 701 + V ++ + Sbjct: 687 MQVADISLL 695 >gi|161505806|ref|YP_001572919.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189082271|sp|A9MLF8|SYGB_SALAR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|160867153|gb|ABX23776.1| hypothetical protein SARI_03982 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 689 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 204/726 (28%), Positives = 336/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + + + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGKVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 + +I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDNVIPATILGIQSDRVIRGHRFMGEPEFTIDTADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI+++D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESTD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|204928626|ref|ZP_03219825.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322059|gb|EDZ07257.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 689 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 337/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGQPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PTQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|16766940|ref|NP_462555.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161616719|ref|YP_001590684.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167990886|ref|ZP_02571985.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168241824|ref|ZP_02666756.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260601|ref|ZP_02682574.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194443562|ref|YP_002042901.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448924|ref|YP_002047683.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197264551|ref|ZP_03164625.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|25009333|sp|Q8ZL96|SYGB_SALTY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|189082272|sp|A9MUU1|SYGB_SALPB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238690224|sp|B4T945|SYGB_SALHS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238693534|sp|B4SWK1|SYGB_SALNS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|16422219|gb|AAL22514.1| glycine tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161366083|gb|ABX69851.1| hypothetical protein SPAB_04538 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402225|gb|ACF62447.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407228|gb|ACF67447.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197242806|gb|EDY25426.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205330783|gb|EDZ17547.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339005|gb|EDZ25769.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205350246|gb|EDZ36877.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261248804|emb|CBG26657.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995905|gb|ACY90790.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160191|emb|CBW19713.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914681|dbj|BAJ38655.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226709|gb|EFX51759.1| Glycyl-tRNA synthetase beta chain [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132015|gb|ADX19445.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332990505|gb|AEF09488.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 689 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 337/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PTQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|22127958|ref|NP_671381.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis KIM 10] gi|45443705|ref|NP_995244.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis biovar Microtus str. 91001] gi|51598201|ref|YP_072392.1| glycyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis IP 32953] gi|108809003|ref|YP_652919.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis Antiqua] gi|108813877|ref|YP_649644.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis Nepal516] gi|145597347|ref|YP_001161422.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis Pestoides F] gi|150260990|ref|ZP_01917718.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis CA88-4125] gi|153949017|ref|YP_001403073.1| glycyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis IP 31758] gi|162420121|ref|YP_001608092.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis Angola] gi|165926203|ref|ZP_02222035.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165936828|ref|ZP_02225394.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166009645|ref|ZP_02230543.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166213303|ref|ZP_02239338.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167398625|ref|ZP_02304149.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420827|ref|ZP_02312580.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425595|ref|ZP_02317348.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467917|ref|ZP_02332621.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis FV-1] gi|170022285|ref|YP_001718790.1| glycyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis YPIII] gi|186897425|ref|YP_001874537.1| glycyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis PB1/+] gi|218931052|ref|YP_002348927.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis CO92] gi|229839779|ref|ZP_04459938.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841863|ref|ZP_04462019.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229896741|ref|ZP_04511905.1| glycine tRNA synthetase, beta subunit [Yersinia pestis Pestoides A] gi|229904400|ref|ZP_04519511.1| glycine tRNA synthetase, beta subunit [Yersinia pestis Nepal516] gi|270488339|ref|ZP_06205413.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis KIM D27] gi|294505601|ref|YP_003569663.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Z176003] gi|25009332|sp|Q8Z9W7|SYGB_YERPE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|81825680|sp|Q663V8|SYGB_YERPS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|122979893|sp|Q1CD86|SYGB_YERPN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|123372145|sp|Q1C3J8|SYGB_YERPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166227933|sp|A4TGN7|SYGB_YERPP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166980042|sp|A7FP95|SYGB_YERP3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238687308|sp|A9R4F9|SYGB_YERPG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238688395|sp|B1JH07|SYGB_YERPY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238691425|sp|B2K7F8|SYGB_YERPB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|21961101|gb|AAM87632.1|AE014010_8 glycine tRNA synthetase, beta subunit [Yersinia pestis KIM 10] gi|45438575|gb|AAS64121.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis biovar Microtus str. 91001] gi|51591483|emb|CAH23154.1| glycyl-tRNA synthetase beta subunit [Yersinia pseudotuberculosis IP 32953] gi|108777525|gb|ABG20044.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Nepal516] gi|108780916|gb|ABG14974.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Antiqua] gi|115349663|emb|CAL22643.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis CO92] gi|145209043|gb|ABP38450.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Pestoides F] gi|149290398|gb|EDM40475.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis CA88-4125] gi|152960512|gb|ABS47973.1| glycyl-tRNA synthetase, beta subunit [Yersinia pseudotuberculosis IP 31758] gi|162352936|gb|ABX86884.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis Angola] gi|165915070|gb|EDR33681.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165922063|gb|EDR39240.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165991567|gb|EDR43868.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166205601|gb|EDR50081.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166960956|gb|EDR56977.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051129|gb|EDR62537.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055609|gb|EDR65402.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169748819|gb|ACA66337.1| glycyl-tRNA synthetase, beta subunit [Yersinia pseudotuberculosis YPIII] gi|186700451|gb|ACC91080.1| glycyl-tRNA synthetase, beta subunit [Yersinia pseudotuberculosis PB1/+] gi|229678518|gb|EEO74623.1| glycine tRNA synthetase, beta subunit [Yersinia pestis Nepal516] gi|229691202|gb|EEO83255.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229696145|gb|EEO86192.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700280|gb|EEO88315.1| glycine tRNA synthetase, beta subunit [Yersinia pestis Pestoides A] gi|262363765|gb|ACY60486.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis D106004] gi|262367701|gb|ACY64258.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis D182038] gi|270336843|gb|EFA47620.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis KIM D27] gi|294356060|gb|ADE66401.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Z176003] gi|320017401|gb|ADW00973.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 689 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 203/722 (28%), Positives = 331/722 (45%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL + + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDNANLSHGEVSWYAAPRRLAVKVANLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L E + Sbjct: 123 KGQPAQLLLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGTE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + S D Y + LE V+ D E R++ I DA + Sbjct: 173 IPGTVLGINSDRVIRGHRFMGEAEFTIDSADQYPQILLERGKVIADYELRKSIIKRDAEQ 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQQIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 293 TAGHLMPHFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 339 -------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLSLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNAKVVDDVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDTLNDHVHASILKEPAELKLATHLVVLRDQLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E ++ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYKEALVELAALRETVDEFFESVMVMAEDDAVRVNRLTLLSKLRELFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|300024367|ref|YP_003756978.1| glycyl-tRNA synthetase subunit beta [Hyphomicrobium denitrificans ATCC 51888] gi|299526188|gb|ADJ24657.1| glycyl-tRNA synthetase, beta subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 693 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 286/711 (40%), Positives = 398/711 (55%), Gaps = 54/711 (7%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +A++DL +++ LK G+ R + TP RL L ++G+ SP EE+ G Sbjct: 13 IPARMQARASDDLKRLIVDGLKARGLDVGEARSFATPRRLTLVIEGVPAKSPAISEEKKG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 PRVGA +A+ GFL+S GL ++ D + KD KKGD Y+A + KP R +++ + Sbjct: 73 PRVGAPDQAVQGFLKSAGLASLEDATVVKDEKKGDFYVAKIEKPGRAAAEIIAETIVEVA 132 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K PWPKSMRW + S+F W+RPL+S+LC+L K++ +L I GN T GH Sbjct: 133 AKFPWPKSMRWGS-----SSFQWVRPLQSVLCLL-----DGKVVPFELNGIEAGNETRGH 182 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 RF P P KV++ Y L V+LDP R AI AH LA LEL+ED LL E Sbjct: 183 RFLGPGPFKVKNFADYEAKLAAHHVMLDPAKRAAAISEQAHALAKDAKLELIEDDALLAE 242 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVLANCFILVSNIQA 311 GL EW V MG+FDK +L +P E++ ++KT+QKCF R R LAN F+LVSN+ A Sbjct: 243 NAGLTEWPVVLMGTFDKAFLEVPAEVLTTSMKTHQKCFSLRETRSKKLANKFLLVSNLVA 302 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 DGGA IV GN +V+ ARL DA FW++D L PL + + Sbjct: 303 KDGGAEIVSGNEKVIRARLSDAKFFWEQD--------------------LKHPLGEMAGK 342 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 L + FH K+G+Q +RV RI L ++A DA RA L+KADL + +V EFP Sbjct: 343 LS--GITFHEKLGSQKDRVERIEALAFELAGACDAIPEDARRAAGLAKADLVSGMVGEFP 400 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS----ITVSLADKLDTLI 487 ELQG +G+ YA A+E H KP+GP + VP + V+LADKLDTL+ Sbjct: 401 ELQGLMGRYYAEHVGTKPEIARALELHYKPKGPTDTVPREDQGDAVAVAVALADKLDTLV 460 Query: 488 NFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---------------DQ 532 FWAI EKP+GS DPY LRRA LG+IRI+LEN + +PL+ +IE Sbjct: 461 GFWAIGEKPTGSGDPYQLRRAALGVIRIVLENDLRVPLNHYIEIGERLHGAKKAAGEVQS 520 Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FF DRLK++L D+ RHDLI+A+ D+L IV ++ L+ F + G L Sbjct: 521 DLLSFFADRLKVFLRDQGKRHDLIDAVFALGGQDDLALIVRRVEALDAFLKTDDGANLLA 580 Query: 592 SAKRIFQILAIEEKKNRE-ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR ILAIEEKK+++ + + + + E L A I +++ + + Sbjct: 581 GVKRAANILAIEEKKDKKSYAGPYDLKLITEKEETALAAAIEATKQDTVAAINVENFAGA 640 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + P++ FF+++LVN DD ++R+NRL LL I+ V + KI Sbjct: 641 MRALSELRAPVDAFFEKILVNADDPKIRENRLRLLSEIRAATQTVADFSKI 691 >gi|200388817|ref|ZP_03215429.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605915|gb|EDZ04460.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 689 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 207/726 (28%), Positives = 337/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + S D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDSADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PTQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|238910311|ref|ZP_04654148.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 689 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 339/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE ++ L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAVNFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYDDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|89074697|ref|ZP_01161155.1| glycyl-tRNA synthetase beta subunit [Photobacterium sp. SKA34] gi|89049461|gb|EAR55022.1| glycyl-tRNA synthetase beta subunit [Photobacterium sp. SKA34] Length = 689 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 215/723 (29%), Positives = 342/723 (47%), Gaps = 62/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FL+E+ +E++P AE + LK + + ++ Y P RL L + GL+ Sbjct: 4 KNFLIELGTEDLPPTALRTLAEAFATNFEAELKAADLPHDGIKWYAAPRRLALKVTGLAE 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + P+K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 64 NQPDKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGITVDQAERMVTD--KGEWLLFKQE 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + +L + A+ K+P P+ MRW + +IRP+K++ +L ++ Sbjct: 122 VKGQPAQALLPELAAAALAKLPIPRPMRWGDKET-----QFIRPVKTLTMLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAH 233 +I+ + + GHRF + + D Y LE V+ D + R+ IL DA Sbjct: 172 LIEGTILGVASARTIRGHRFMGEAEFTIDNADQYPAILEERGKVMADYDARKAIILADAK 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A AVG + DL+EE+ LVEW V SF++++L +P E + T+K +QK F Sbjct: 232 KAAEAVGGIADLEDDLVEEVTSLVEWPVVLTASFEEEFLKVPSEALVYTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI VSNI ++D + I+ GN +VV RL DA F+ D Sbjct: 292 DAEGKLVPKFIFVSNIISND-PSQIISGNEKVVRPRLADAEFFFNTD------------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L L R+ +L+ +F ++GT ++ RI L IA I ADV R Sbjct: 338 -------LKSKLVDRLPQLETA--IFQKQLGTIKDKTDRITELAGYIADKIGADVDNAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 389 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEQEDVALALNEQYMPRFAGDQLPSTPV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN D+ L I Sbjct: 449 SSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYDLDLVDLIAKAH 507 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 D ++I F R + + D D+I+A+L +K ++ Sbjct: 508 SLFGDKLTNDNVDSDVIEFMLGRFRAWYQDAGFSIDVIQAVLAMHPTQPADFDKRVKAVS 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F E + KR+ ILA K + E+ + L+ AEK L ++ + Sbjct: 568 HFRELDAAESLAAANKRVGNILA---KFDGELPTTVDNSLLVEAAEKELAEKVTAVVAAL 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y L S+ EP++ FFD V+V DD +++ NRL+LL ++N L V ++ Sbjct: 625 ESVFAAGDYQTALSELASLREPVDAFFDNVMVMADDEKLKVNRLALLSLLRNQFLKVADI 684 Query: 699 QKI 701 + Sbjct: 685 SLL 687 >gi|322613960|gb|EFY10896.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620329|gb|EFY17197.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625334|gb|EFY22161.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629999|gb|EFY26772.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634189|gb|EFY30924.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635910|gb|EFY32619.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643062|gb|EFY39637.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644607|gb|EFY41143.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650849|gb|EFY47241.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652987|gb|EFY49322.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659950|gb|EFY56190.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663283|gb|EFY59487.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668769|gb|EFY64922.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674428|gb|EFY70521.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678364|gb|EFY74425.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680870|gb|EFY76904.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687194|gb|EFY83167.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192153|gb|EFZ77386.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200657|gb|EFZ85731.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201367|gb|EFZ86433.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206767|gb|EFZ91721.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211803|gb|EFZ96635.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216162|gb|EGA00890.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220385|gb|EGA04839.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226242|gb|EGA10457.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228362|gb|EGA12493.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234183|gb|EGA18271.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237168|gb|EGA21235.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244687|gb|EGA28691.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249168|gb|EGA33086.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250713|gb|EGA34593.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257588|gb|EGA41275.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262297|gb|EGA45858.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266148|gb|EGA49639.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268783|gb|EGA52241.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 689 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 207/726 (28%), Positives = 337/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I I GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRIIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PTQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|146309830|ref|YP_001174904.1| glycyl-tRNA synthetase subunit beta [Enterobacter sp. 638] gi|166980039|sp|A4W573|SYGB_ENT38 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145316706|gb|ABP58853.1| glycyl-tRNA synthetase beta chain [Enterobacter sp. 638] Length = 689 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 204/726 (28%), Positives = 335/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSDKTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLTHGKIEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ ++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAASQADREVEKRGPAISQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAEALLPNMIATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 + +I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDTVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYELRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDPIQ-IISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIAELSGWIAREIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLSLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNAKVVDEVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + ++ ++ L E L + Sbjct: 566 AVSHFRTLEAASALAAANKRVSNILA---KSDETLNERVNAATLKEPEEIALALQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + E I+ FF++V+VNV+D+++R NRLS+L+ ++ + L V Sbjct: 623 DKLEPFFAEGRYQEALVELAELREVIDAFFEKVMVNVEDKDLRINRLSMLEKLRELFLRV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|62182160|ref|YP_218577.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|81309553|sp|Q57IG6|SYGB_SALCH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|62129793|gb|AAX67496.1| glycine tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716647|gb|EFZ08218.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 689 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 336/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLEHGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PTQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN ++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAKEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|332288855|ref|YP_004419707.1| glycyl-tRNA synthetase subunit beta [Gallibacterium anatis UMN179] gi|330431751|gb|AEC16810.1| glycyl-tRNA synthetase subunit beta [Gallibacterium anatis UMN179] Length = 689 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 203/723 (28%), Positives = 344/723 (47%), Gaps = 61/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FL EI +EE+P + K A + L + G+ + + + +P RL + + GL+ Sbjct: 4 KNFLAEIGTEELPPKALKKLAVAFKDNVEQELTQAGLAFDAVEWFASPRRLAVKVLGLAE 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 64 AQPSKEVEKRGPAVAAAFDAEGKPTKAAEGWARGCGISVDQAERLVTD--KGEWLVHRAV 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +++L I+ A+ K+P PK MRW + +IRP+ ++ + ++ Sbjct: 122 IEGQPTKNLLLGIISNALAKLPIPKPMRWGDKNE-----QFIRPVHTVTLLF-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAH 233 +I+ + + G GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 172 LIEGKILGVKSGRTIRGHRFLGQQEFTIDNADQYPQLLAEKGSVIADFEQRKAIIRQDAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A+ VG ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 KAAAKVGGIADIEEDLLDEVTSLVEFPVVMTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI VSNI D + ++GN +VV RL DA F+K D Sbjct: 292 DQNGKLLPNFIFVSNINPQDQSSV-IEGNEKVVRPRLSDAEFFFKTD------------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L + L+ + RL V+F ++GT ++ RI L +IA I ADVA +R Sbjct: 338 -------LKQRLEDNLPRLKT--VLFQQQLGTLFDKTERIEKLSGEIAAQIGADVAKAER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPHSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +V+LADK DTL+ + I + P G KDP+ALRRA LG++RII+E K+ + L + Sbjct: 449 ACSVALADKFDTLVGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLVDLAQKAA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++++ F R + + + I D+I+A+L +K +N Sbjct: 509 ALYGDKLSNANVVEDVVDFILGRFRAWYQEEGIAVDVIQAVLACRPTKPADFDARVKAVN 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ IL+ K + + I E L + + + Sbjct: 569 HFRTLDAAQALAAANKRVQNILS---KVDGALPENIDLSLCREPQEINLAERVLELQREL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q + Y + L + E ++ FFD V+VN +D ++R NRL+LL+ ++++ + ++ Sbjct: 626 QPLFEKGDYQTVLSRLADLRESVDSFFDNVMVNAEDEKLRQNRLALLKNLRDLFFKIADI 685 Query: 699 QKI 701 + Sbjct: 686 SLL 688 >gi|295689050|ref|YP_003592743.1| glycyl-tRNA synthetase subunit beta [Caulobacter segnis ATCC 21756] gi|295430953|gb|ADG10125.1| glycyl-tRNA synthetase, beta subunit [Caulobacter segnis ATCC 21756] Length = 664 Score = 625 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 275/703 (39%), Positives = 392/703 (55%), Gaps = 43/703 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLE++SEEIPARMQ +AA+DL + L G + + + + P RL L +GL Sbjct: 1 MPQLLLELFSEEIPARMQAQAAKDLERMAREHLAAAGFLPEALTTFAGPRRLTLVAEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EE GPRVGA +A++GFLR TGL D +++D VY+A + K R Sbjct: 61 LAQADRKEELKGPRVGAPPQAMEGFLRKTGLT--QDQLVERDG----VYMAFIEKKGRPT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ +V ++ PWPKSM W W+RPLK ILC+L E ++ + Sbjct: 115 AEIVAEMVEAIVRGFPWPKSMIWG-----YKKLRWVRPLKRILCVLDRE-----VVPFSI 164 Query: 181 KEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + I G++T GHRF P + D Y LE+ V+LD E R+ IL L A Sbjct: 165 EGIESGDVTEGHRFMGEAKPFVAKDFDEYAAGLEKHFVVLDVEERKQRILEGCKTLCFAR 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGV 298 LELVED+ LL+E+ GL EW +G D +L LP E+IR +++T+QK F + E Sbjct: 225 HLELVEDQGLLDEVAGLAEWPTPVLGDMDPSFLDLPPEVIRTSMRTHQKYFAVKKPGEPG 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FI ++NIQA DGGA I GN++V++ARL DA FW D+ Sbjct: 285 LAPHFITIANIQAKDGGAVIAAGNAKVLSARLSDARFFWDEDR----------------- 327 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + + +L+ V FHAK+GT +RV RI L IA L+ ADVA A L+ Sbjct: 328 ---KAGFEPWLEKLN--GVTFHAKLGTMAQRVERIVALAGAIAPLVGADVAKAKEAARLA 382 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA + AI++H KP+GP + VPT+ ++I V+ Sbjct: 383 KADLASGMVGEFPELQGLMGGYYAREAGLDPEIAAAIQDHYKPQGPSDAVPTSPLAIAVA 442 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF 538 LADKLDTL+ F+AI+EKP+GSKDPYALRRA LG+IRI+LEN + + L++F + +LI FF Sbjct: 443 LADKLDTLVGFFAIDEKPTGSKDPYALRRAALGVIRIVLENGLRVSLAKFGK-DDLIAFF 501 Query: 539 HDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DRLK+ L D+ RHDL++A+ +D+L IV ++ L+ F + G+ L KR Sbjct: 502 ADRLKVTLRDQGKRHDLVDAVFALGDDDLARIVARVEALDGFLKTDDGKNLLAGYKRASN 561 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 IL EEKK S E AE +LY + + +++ + + L + Sbjct: 562 ILKAEEKKGALPSGEPEAPAADSAAEVQLYDALRVLKGPLADALAKEDFTGAMAQLAGLR 621 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ + D V VN D E RDNRL L +++ + V + I Sbjct: 622 GPVDAYLDGVFVN--DPEHRDNRLKTLAAVRDAMGQVADFGLI 662 >gi|56415548|ref|YP_152623.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364476|ref|YP_002144113.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81821567|sp|Q5PLN2|SYGB_SALPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238690750|sp|B5BHU1|SYGB_SALPK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|56129805|gb|AAV79311.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095953|emb|CAR61536.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 689 Score = 625 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVVTSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + S + Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDSAEQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PTQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|312115351|ref|YP_004012947.1| glycyl-tRNA synthetase subunit beta [Rhodomicrobium vannielii ATCC 17100] gi|311220480|gb|ADP71848.1| glycyl-tRNA synthetase, beta subunit [Rhodomicrobium vannielii ATCC 17100] Length = 721 Score = 625 bits (1611), Expect = e-176, Method: Composition-based stats. Identities = 301/752 (40%), Positives = 419/752 (55%), Gaps = 84/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE++SEEIPAR+Q + A+DL+ ++ L + G+ R P R+ + Sbjct: 1 MPNLLLELFSEEIPARLQGRGADDLAKLMTEALTKGGLTVGATRTLSGPRRIVFIADDVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HS +EER GPR A KA++GF+++ GL +I + Q+ KDP KGD YLA KP R Sbjct: 61 AHSAATVEERKGPRTSAPAKALEGFVKAAGLNSIDEAQVVKDP-KGDYYLARSEKPGRAA 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ VP I+K PWPKSMRW WIRPL SILC+ +K + ++ Sbjct: 120 ADIIAEAVPDIIRKFPWPKSMRWGNGR-----LRWIRPLHSILCLF-----DDKPVAFEV 169 Query: 181 KEIPCGNITYGHRFHA------PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I G+ITYGHRF + P +KV + Y L A V++ E R AIL AH Sbjct: 170 DGIKSGDITYGHRFLSGENITQPKVVKVDRISDYADALMHAKVVVAGEHRAKAILEGAHT 229 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 AS GL LVED LL E GLVEW V G F++ +L +PEE++ ++K +QKCF R+ Sbjct: 230 AASDAGLALVEDHGLLAENAGLVEWPVVLSGQFEESFLDVPEEILMTSMKAHQKCFSLRS 289 Query: 295 -REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G LAN FILVSN++A DGG AIV GN RV+ ARL DA FW+ D+ Sbjct: 290 AKTGKLANRFILVSNLEAEDGGKAIVAGNERVIRARLSDAKFFWENDR------------ 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 +PL+ A L V FH K+GTQ RV RI+ L +++A ++ AD R Sbjct: 338 --------KRPLEGLTALLGQ--VTFHEKLGTQFRRVERIKALARELAPIVGADPDDAVR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+KADL +E V EFPELQG IG A+ Q E + DAI EH KP+GP + VPTN + Sbjct: 388 AAHLAKADLMSETVGEFPELQGIIGSYIALAQGEKPAVADAIAEHYKPQGPSDAVPTNPV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 ++ V+LADKLD L+ FWAI+EKP+GSKDP+ALRRA LG+IRI+LEN + + L + IE Sbjct: 448 AVAVALADKLDMLVGFWAIDEKPTGSKDPFALRRAALGVIRIVLENGLRVELMKIIEKAS 507 Query: 531 ---------------------------------------DQNLILFFHDRLKLYLHDRDI 551 + ++ FF DRLK+YL D+ Sbjct: 508 ELIDEDQYERAMRRVEKSGGTVAFAKTSVEWNGRQIGTREAEMLSFFADRLKVYLRDQGA 567 Query: 552 RHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-RE 609 RHDLI+A+ P D+LL +V ++ L F + G+ L +R IL IEEKK+ R Sbjct: 568 RHDLIDAVFALPGQDDLLMVVRRVEALGRFLETDDGKSLLALVRRALNILRIEEKKDARA 627 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 E + + L + EK L + + G ++ ++ + + L + P++ FFD+V Sbjct: 628 FDGEPAAKLLKEKEEKALASAVKAVGKDVRAALATEDFEAAMTALAKLRAPVDAFFDKVT 687 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN D ++R+NRL+LL I+ + L + + KI Sbjct: 688 VNADAADIRENRLTLLAQIRALTLDIADFSKI 719 >gi|109896340|ref|YP_659595.1| glycine--tRNA ligase [Pseudoalteromonas atlantica T6c] gi|123361467|sp|Q15ZZ0|SYGB_PSEA6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|109698621|gb|ABG38541.1| glycyl-tRNA synthetase beta chain [Pseudoalteromonas atlantica T6c] Length = 692 Score = 625 bits (1611), Expect = e-176, Method: Composition-based stats. Identities = 205/720 (28%), Positives = 348/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K A+ + L G L + Y +++ + +P RL + + GL+ Sbjct: 5 NLLVEIGTEELPPKALGKLAQAFADNLQGALDTAELKYTSIKWFASPRRLAVNVIGLAEQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ RS G+ ++ KG+ L Sbjct: 65 QEDKLIEKKGPAVSVAFDESGQATKAAQGWARSNGITVEQAERL--TTDKGEWLLFKGEA 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L ++ A++K+P PK+MRW + S+ +IRP+ ++ + A+ + Sbjct: 123 KGEQVSSLLPAMIDGALKKLPIPKAMRWGS-----SSIQFIRPVHTVTMLFGAD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ ++ I + GHRFH + D Y+ LE VL D R++ I + + Sbjct: 173 IEGNILGIDSDRVINGHRFHGEKQFSLSHADDYLAQLEAHYVLADFSARKDKIRHQVNAA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++DLL+E+ LVEW SFD +L +P+E + T+K +QK F + Sbjct: 233 AQKEDAVADMNEDLLDEVTALVEWPVALTASFDDSFLEVPKEALIYTMKDDQKYFPLIDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L + F+ V+NI++ D I+ GN +V+ RL DA F+ D+ Sbjct: 293 NGQLKSRFVFVTNIESKD-PMQIISGNEKVIRPRLADAEFFFNTDK-------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L V+F ++GT E+ RI L IA ++ +D++ RA Sbjct: 338 ------KTTLESRLESLKT--VLFQKQLGTLYEKSQRISELAGTIANMLSSDISQASRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFP++QG +G YA E+ A+ E PR + +PT+ IS Sbjct: 390 LLSKTDLMTNMVMEFPDVQGVMGMHYAKHDGEHDKVALALNEQYMPRFAGDQLPTSNISC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADK+DTL+ + I + P G KDP+ALRRA +G++RI +E K+ + L+ ++ Sbjct: 450 AVAIADKIDTLVGIFGIGQVPKGDKDPFALRRAAIGVLRISVEMKLPLDLTTLVQASINS 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + +I F R + + D+ I D+I+A+ I+ ++ Sbjct: 510 FGTKLTHVEDLESQVIDFILGRFRAWYQDQHIDIDVIQAVAARRPTKPADFAARIEAVSA 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S A G + KR+ ILA K + I+ E E L +SD + Sbjct: 570 FKSLASGLALASANKRVANILA---KNKVTDTNSINSSLFESEHEAALADAMSDIEETVN 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + L ++ + ++ FFD V+V +D VR+NRL+LL ++ + L+V ++ Sbjct: 627 AFVVDANYQGVFTELATLHDKVDAFFDNVMVMAEDENVRNNRLALLSKLRTLFLLVADIS 686 >gi|270264147|ref|ZP_06192414.1| glycyl-tRNA synthetase, beta subunit [Serratia odorifera 4Rx13] gi|270041796|gb|EFA14893.1| glycyl-tRNA synthetase, beta subunit [Serratia odorifera 4Rx13] Length = 689 Score = 625 bits (1611), Expect = e-176, Method: Composition-based stats. Identities = 202/720 (28%), Positives = 326/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDSANLEHGEVSWFAAPRRLALKVANLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW S ++RP+ ++ +L AE + Sbjct: 123 KGQSAQALLAGMVSTALSKLPIPKLMRWGD-----SEVQFVRPVHTVTLLLGAE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I GHRF + + D Y + LE V+ D E R+ I DA Sbjct: 173 IPGTVLGIESARTLRGHRFMGEAEFTIDNADQYPQILLERGKVIADYEARKALIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQQIGGKADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 AAGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 339 -------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAGQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPESLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 ++++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CSLAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + + D I+A+L +K + Sbjct: 510 LYGSKLSNAKAVDEVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTKPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLEEAAALAAANKRVSNILA---KSTDTLNDRVHAAVLKEAAEIQLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y L ++ EP++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGDYQDALVQLAALREPVDAFFDNVMVMAEDDAVRVNRLTLLSKLRELFLQVADIS 686 >gi|77163904|ref|YP_342429.1| glycine--tRNA ligase [Nitrosococcus oceani ATCC 19707] gi|254435742|ref|ZP_05049249.1| glycyl-tRNA synthetase, beta subunit [Nitrosococcus oceani AFC27] gi|76882218|gb|ABA56899.1| glycyl-tRNA synthetase beta chain [Nitrosococcus oceani ATCC 19707] gi|207088853|gb|EDZ66125.1| glycyl-tRNA synthetase, beta subunit [Nitrosococcus oceani AFC27] Length = 691 Score = 625 bits (1611), Expect = e-176, Method: Composition-based stats. Identities = 222/727 (30%), Positives = 348/727 (47%), Gaps = 64/727 (8%) Query: 1 MP---DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M D L+EI +EE+P + K +E L L L+ G+IY +++ Y P RL ++++ Sbjct: 1 MAETRDLLIEIGTEELPPKALRKLSESLLQELSHGLQAAGLIYGDLKGYGAPRRLAVWVQ 60 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 L+ PE++ ER GP + G A GF S G+ + +K + KG + Sbjct: 61 ALTVSQPEQVLERRGPALAAAFNEEGKPTAAARGFAGSCGVPVEALESLKNE--KGAWLV 118 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 R+ ++L I+ A+Q +P PK MRWS +IRP+ ++ + Sbjct: 119 YRQRQQGAPTRELLPAILAQALQALPIPKPMRWSDL-----PGEFIRPVHWLVLLF---- 169 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAIL 229 E++I L + G T GHRFH P P+ + Y LE E VL D RR AI Sbjct: 170 -GEEVIPATLLGVQAGRETQGHRFHHPEPLYLTEPAAYATLLETEGKVLADFAVRREAIY 228 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A +G + + ++ LL+E+ GLVEW G FD +L LP E++ T++ +QK Sbjct: 229 TQVVAAAQQMGGKALIEEALLDEVTGLVEWPVALAGQFDGDFLKLPAEVLIATMQDHQKY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + +G L CFI V NI++ +V+GN RV+ RL DA F+ D+ Sbjct: 289 FPVQDEQGHLLPCFITVCNIES-QRPEVVVEGNERVIRPRLTDAAFFYATDR-------- 339 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 + L R RL + F K+G+ ER R+ L IA+ I + Sbjct: 340 ------------KESLASRCERLK--KITFQEKLGSVFERTERLAKLAWHIAKDIGGNGD 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL TE+V EFPELQG +G+ YA+ +E +A+ E PR + +P Sbjct: 386 WAKRAGLLSKCDLVTEMVTEFPELQGSMGRYYALHDHEPQEVAEALREQYLPRFAGDVLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +SLAD+LDTL+ + I PSG KDPY LRRA LG++RII+E+ + + L + Sbjct: 446 RTATGQALSLADRLDTLVGLFGIGAPPSGDKDPYGLRRAALGVLRIIIESGLALDLPSLL 505 Query: 530 EDQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + + + +RL+ Y + R D IEA+L D L + Sbjct: 506 KRACETYNDRLTEKNTAVQVHAYLLERLRGYYLEAGFRPDEIEAVLAVRPDQPLDFDRRL 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K + F + E + KRI IL K ++ +I L AE+ L + Sbjct: 566 KAVASFRKLPEAESLSAANKRIRNILR---KSGEKLPAQIESDLLQDPAEQTLATQMYSL 622 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + ++ + + L + ++ FFD+V+V V+D ++R NRL+LL ++ + L Sbjct: 623 EREMMPLLERQDHRATLTALAGLRGAVDQFFDEVMVMVEDPKLRANRLALLARLQTLFLQ 682 Query: 695 VINVQKI 701 V ++ ++ Sbjct: 683 VADISRL 689 >gi|238793179|ref|ZP_04636807.1| Glycyl-tRNA synthetase beta subunit [Yersinia intermedia ATCC 29909] gi|238727552|gb|EEQ19078.1| Glycyl-tRNA synthetase beta subunit [Yersinia intermedia ATCC 29909] Length = 689 Score = 624 bits (1610), Expect = e-176, Method: Composition-based stats. Identities = 204/722 (28%), Positives = 329/722 (45%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL + + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDNANLPHGEVVWYAAPRRLAVKVTDLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQLLLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + S D Y + LE V+ D E R++ I DA Sbjct: 173 IPGTVLGIDSDRVIRGHRFMGEAEFTIDSADQYPQILLERGKVIADYELRKSIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGIADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 293 AAGSLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 339 -------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNGNVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLDAAATLAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGNYQEALVELAALRETVDEFFDSVMVMAEDDAVRVNRLTLLSKLRELFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|197251342|ref|YP_002148583.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|238689993|sp|B5EX65|SYGB_SALA4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|197215045|gb|ACH52442.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 689 Score = 624 bits (1610), Expect = e-176, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 338/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPAIILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PTQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|188535522|ref|YP_001909319.1| glycyl-tRNA synthetase subunit beta [Erwinia tasmaniensis Et1/99] gi|238689720|sp|B2VCH1|SYGB_ERWT9 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|188030564|emb|CAO98459.1| Glycyl-tRNA synthetase beta chain [Erwinia tasmaniensis Et1/99] Length = 689 Score = 624 bits (1610), Expect = e-176, Method: Composition-based stats. Identities = 202/726 (27%), Positives = 335/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L L G+ + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAESFAANLTAELDAAGLAHGEVSWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ KG+ + Sbjct: 61 LSAAQPDREVEKRGPAIQAAFDANGVATKAAEGWARGCGITVDQAERL--STDKGEWLMY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 R + +L ++ ++ K+P PK MRW S ++RP+ ++ +L Sbjct: 119 RARVTGERTQVLLPAMIATSLAKLPIPKLMRWGA-----SEVQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +++I ++ I I GHRF + D Y + LE V D R+ I Sbjct: 169 GDELIPANILGIDSARIIRGHRFMGEPEFTIDHADQYPQILLERGKVQADYAARKAIIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGVADLSDSLLEEVTSLVEWPVVLTATFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDKAGKLLPNFIFVTNIESKD-PQQIISGNEKVVRPRLADAEFFFNSDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + L+ + RL+ V+F ++GT + RI+ L +A I ADV Sbjct: 339 -----------KRRLEDNLPRLET--VLFQKELGTLRAKTDRIQALAGWVAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++ F R + + + D ++A+L +K Sbjct: 506 EAVRLYGSKLSNAKAVDEVVDFMLGRFRTWYQEEGHSVDTLQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEQAASLAAANKRVSNILA---KATEPLNDSVQASLLKENEEIKLATYVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + E ++ FFD+V+VN +++EVR NRL+LL ++ + L V Sbjct: 623 SKLQPFFAEGRYQDALIELAQLREAVDNFFDKVMVNAEEKEVRINRLTLLAKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|224585454|ref|YP_002639253.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254781860|sp|C0Q1B6|SYGB_SALPC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|224469982|gb|ACN47812.1| glycyl-tRNA synthetase beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 689 Score = 624 bits (1610), Expect = e-176, Method: Composition-based stats. Identities = 206/726 (28%), Positives = 336/726 (46%), Gaps = 63/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PTQIISGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 339 -----------KKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN ++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAKEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|123444319|ref|YP_001008285.1| glycyl-tRNA synthetase subunit beta [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166227932|sp|A1JT50|SYGB_YERE8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|122091280|emb|CAL14166.1| glycyl-tRNA synthetase beta subunit [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 689 Score = 624 bits (1609), Expect = e-176, Method: Composition-based stats. Identities = 204/722 (28%), Positives = 330/722 (45%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + Y + Y P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELNNANLPYGEVIWYAAPRRLALKVTNLSAT 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQLLLAGMVNTALSKLPIPKLMRWGDKDT-----QFVRPVHTVTMLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I + I I GHRF + + D Y + L+ V+ D E R+ I DA Sbjct: 173 IPGTVLGIDSDRIIRGHRFMGEPEFTLDNADQYPQVLQERGKVIADYELRKAIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 293 TAGNLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 339 -------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNTKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K +++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDKLNDHVRASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E ++ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYQEALVELAALRETVDEFFESVMVMDEDDAVRVNRLTLLSKLRELFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|238757318|ref|ZP_04618504.1| Glycyl-tRNA synthetase beta subunit [Yersinia aldovae ATCC 35236] gi|238704357|gb|EEP96888.1| Glycyl-tRNA synthetase beta subunit [Yersinia aldovae ATCC 35236] Length = 689 Score = 624 bits (1609), Expect = e-176, Method: Composition-based stats. Identities = 205/722 (28%), Positives = 328/722 (45%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDSANLPHGEVVWYAAPRRLALKVINLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDTEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQLLLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I I GHRF + + D Y + LE V+ D E R+ I DA Sbjct: 173 IPGTVLGIDSDRIIRGHRFMGEAEFTIDNADQYPQILLERGKVIADYELRKTIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQQIGGIADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 293 AAGNLMPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT + RI+ L +A I ADV RA Sbjct: 339 -------KKRLEDNLPRLET--VLFQQQLGTLRHKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNSKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDTLNDHVRASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYQEALVELAALRETVDEFFDSVMVMAEDDAVRVNRLTLLSKLRELFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|309787763|ref|ZP_07682374.1| glycyl-tRNA synthetase beta subunit [Shigella dysenteriae 1617] gi|308924513|gb|EFP70009.1| glycyl-tRNA synthetase beta subunit [Shigella dysenteriae 1617] Length = 682 Score = 624 bits (1609), Expect = e-176, Method: Composition-based stats. Identities = 203/718 (28%), Positives = 333/718 (46%), Gaps = 61/718 (8%) Query: 7 EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK 66 EI +EE+P + AE + L G+ + ++ + P RL L + L+ P++ Sbjct: 2 EIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDR 61 Query: 67 IEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 62 EIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLYRAHVKGES 119 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 E +L +V ++ K+P PK MRW + ++RP+ ++ +L +K+I Sbjct: 120 TEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL-----GDKVIPAT 169 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASA 238 + I + GHRF + + D Y L V+ D E R+ I DA A Sbjct: 170 ILGIQSDRVIRGHRFMGEPEFAIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARK 229 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F +G Sbjct: 230 IGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYANDGK 289 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 290 LLPNFIFVANIESKDQ-QQIISGNEKVVRPRLADAEFFFNTDR----------------- 331 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA +LS Sbjct: 332 ---KKRLEDNLPRLQT--VLFQLQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLS 386 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ ++ Sbjct: 387 KCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALA 446 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 +ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 447 IADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGD 506 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 ++I F R + + D D I+A+L +K ++ F + Sbjct: 507 KLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTL 566 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 567 EAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFA 623 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ + Sbjct: 624 EGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLL 681 >gi|271498623|ref|YP_003331648.1| glycyl-tRNA synthetase subunit beta [Dickeya dadantii Ech586] gi|270342178|gb|ACZ74943.1| glycyl-tRNA synthetase, beta subunit [Dickeya dadantii Ech586] Length = 689 Score = 624 bits (1609), Expect = e-176, Method: Composition-based stats. Identities = 209/724 (28%), Positives = 336/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L G+ YQ++ + P RL L + G Sbjct: 1 MTDKTFLVEIGTEELPPKALRTLAESFAAHFTAELDAAGLGYQSVDWFAAPRRLALKVVG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LSASQPDREVEKRGPAIAQAFDAAGNPTKAAEGWARGCGITVSQAERL--TTDKGEWLLF 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGEAAQTLLPGMVSTALAKLPIPKLMRWGDNDT-----QFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +++I + I G GHRF + + D Y + LE VL D + R+ I Sbjct: 169 GDELIPGTVLGIDSGRTLRGHRFMGEPEFTIDNADQYPQILLERGKVLADYDARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNADKLLPNFIFVANIESKD-PQQIIAGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI L +A I ADV Sbjct: 339 -----------KKRLEDHLPRLAT--VLFQQQLGTLRDKTDRIAALTGWVAGQIGADVEH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 AKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E ++ + L E Sbjct: 446 SAVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + E + KR+ ILA K ++ + L + E +L ++ Sbjct: 566 AVSHFRTLEQAEALAAANKRVSNILA---KSTETLNDSVQAALLKEKEEIQLATYVTALT 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + RY + L + E ++ FFD+V+VN DD +VR NRL+LL ++N+ L V Sbjct: 623 SKLAPWFAEGRYQEALAELAQLRESVDNFFDKVMVNADDAQVRINRLTLLNELRNLFLKV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|332533695|ref|ZP_08409554.1| glycyl-tRNA synthetase beta chain [Pseudoalteromonas haloplanktis ANT/505] gi|332036859|gb|EGI73320.1| glycyl-tRNA synthetase beta chain [Pseudoalteromonas haloplanktis ANT/505] Length = 689 Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats. Identities = 213/723 (29%), Positives = 342/723 (47%), Gaps = 62/723 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L+EI +EE+P + K AE + L L+ + +Q + Y +P RL L +K Sbjct: 1 MSAQNLLVEIGTEELPPKALRKLAEAFAANLTQELETLELAHQGVSWYASPRRLGLQVKA 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L +K E+ GP G KA G+ R G++ ++ D KG L Sbjct: 61 LEAKQQDKEVEKRGPATKAAFDSEGNPTKAAMGWARGCGIEVKDAQTLETD--KGAWLLH 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + + ++ + A+ K+P PK MRW + +IRP+ ++ + Sbjct: 119 IAKVAGQETKTLMTDAITKALSKLPIPKPMRWGANKT-----QFIRPVHTVTILF----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++++ ++ N GHRFH P I + D L+ A V+ D E R+ I Sbjct: 169 GDELLEGEILGKQITNQLQGHRFHHPEKISINHADDVFDVLKSAYVIADYEQRKAQIRAQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 ASAV + D+DLLEE+ LVEW +F++ +L +P E + T+K +QK F Sbjct: 229 IEEAASAVNAVVAMDEDLLEEVTSLVEWPVTLTATFEEAFLDVPAEALIYTMKDDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L N F+ VSNI++ D + ++ GN +VV RL DA F++ D+ Sbjct: 289 LLDQNGKLLNKFLFVSNIESKD-PSVVISGNEKVVRPRLADAQFFFETDK---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 K L+ R+ LD V+F ++GT ++ RI L IA+ + AD L Sbjct: 338 ----------KKTLESRLESLD--SVLFQKQLGTLKDKSERISELAGYIAEQLGADKDLA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EF ++QG +G YA E A E PR +N+PTN Sbjct: 386 QRAGLLSKTDLMTEMVMEFTDVQGVMGMHYARHDGEAEDVAVAQNEQYMPRFAGDNLPTN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP------- 524 IS V++ADK DTL+ + I + P G KDP+ALRRA +G +RI++E ++ + Sbjct: 446 LISCAVAIADKFDTLVGIFGIGQAPKGDKDPFALRRAAIGALRIMVEKELPLDILDLVAK 505 Query: 525 --------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 L+ ++ F R + + D I D+I+A+L + +K Sbjct: 506 SQTLFGDKLTNLNVSTDVFEFMLGRFRAWYQDEGIEVDVIQAVLARRPTKPVDFDRRVKA 565 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + E + KR+ ILA K + + L +AEK L + ++ F T Sbjct: 566 VSHFRTLDAAEALAAANKRVGNILA---KNDITSQGSVDESLLSDDAEKVLASQVAKFAT 622 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + Y + L I E ++ FFD V+V DD V+ NRL+LL + + L + Sbjct: 623 DLAPLYADGNYQEALSQLAGIRESVDNFFDNVMVMADDEAVKQNRLALLNQLSGLFLGIA 682 Query: 697 NVQ 699 ++ Sbjct: 683 DIS 685 >gi|254488839|ref|ZP_05102044.1| glycyl-tRNA synthetase, beta subunit [Roseobacter sp. GAI101] gi|214045708|gb|EEB86346.1| glycyl-tRNA synthetase, beta subunit [Roseobacter sp. GAI101] Length = 742 Score = 623 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 275/765 (35%), Positives = 399/765 (52%), Gaps = 89/765 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L E G+ Y + + TP RL L ++G+ Sbjct: 1 MPDLLIELFSEEIPARMQARAADDLKKLVTNGLVEAGLTYASAAAFSTPRRLTLTVQGML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A +KAI+GFLR GL D +++ KG++ A++RKP R Sbjct: 61 DASPSITEERKGPKADAPEKAIEGFLRGAGLT--RDQLEERETPKGNILFAMIRKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ I+ PWPKSMRW W+RPL SILCIL AED +++ + + Sbjct: 119 ADIVAEVLETTIRNFPWPKSMRWG-----TGTLRWVRPLHSILCILSAED-GAQVVPMTV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP I V S D Y L+ A V+LDP RR+AI +DA +A A G Sbjct: 173 DGIDAGATTRGHRFLAPGAITVSSFDDYTAKLKRAFVVLDPAERRDAIWHDATNMAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAGLLAEVAGLVEWPVVLMGRIGDDFLDLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW+ D + + ++ Sbjct: 293 ERFVTVANRTTADDGATILAGNEKVLSARLSDAKFFWENDLRIAQSDAGMQV-------- 344 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + RL +V FH K+GTQ E +SR+ L ++A ++ AD +A +KA Sbjct: 345 -------WVDRLS--NVTFHNKLGTQAELISRMEALAGELAPMVGADADEARQAARFAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G YA ++ + A ++H P GP ++VPT +SI V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGSYYAKAAGKSGAIAAAAQDHYAPLGPSDDVPTAPVSIAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------------ 528 +K+D L FWAI+EKP+GSKDP+ALRRA LG+IRI++EN + +PL Sbjct: 456 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRILVENDLHVPLDHLHAAQLVRNKRKV 515 Query: 529 ---IEDQNLILFFHDRLKL-----------YLHDRDIRHD----LIEAILRPENDNLLTI 570 +ED ++ H+ K + +D+ D L A+ D L + Sbjct: 516 MPGLEDHHVEDLLHEIAKHGVFASAFQAFIHRNDKKAPTDDIAKLETAVPAKSGDLLSFL 575 Query: 571 VDL---------------------------------IKHLNEFFSSAKGEKFLLSAKRIF 597 D K LNE + GE + KR Sbjct: 576 HDRLKVYLKDKGIRHDIIDACIAMPGNDDLTLLVKRAKALNETLKTDDGENLIQGFKRAN 635 Query: 598 QILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 IL+ E + E S ++ + E+ L+A + I +MD + + + S Sbjct: 636 NILSQAETADGVEYSFGADIKFAETDEERALFAALDAAEAQINPAMDAQDFTAAMSAMAS 695 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + PI+ FFD V VN D+ VR NRL+LL I+ I V ++ KI Sbjct: 696 LRAPIDAFFDAVQVNSDNGTVRRNRLNLLSRIRTICTSVADLTKI 740 >gi|15602967|ref|NP_246039.1| glycyl-tRNA synthetase subunit beta [Pasteurella multocida subsp. multocida str. Pm70] gi|13431896|sp|P57905|SYGB_PASMU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|12721444|gb|AAK03186.1| GlyS [Pasteurella multocida subsp. multocida str. Pm70] Length = 689 Score = 623 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 205/722 (28%), Positives = 350/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ +++++ + P RL + + L+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENMELELNQAGLAFESVQWFAAPRRLAVKVLALATS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGISVEQAERVATD--KGEWLVHRATI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++LK +V A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLKDMVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++ D Y L+E V+ D R+ IL + Sbjct: 173 IEGEILGVESARTLRGHRFLGEREFQISHADQYPALLKEKGSVVADFNDRKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G + DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEDDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPDD-PSKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADEVKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I ++P GS DP+ALRRA LG +RII+E + + L++ ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQQPKGSADPFALRRAALGALRIIVEKNLPLDLAEIVKKSSA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVEDVVEFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPSDFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K E+ I AEK L + + Sbjct: 570 FRALEAAEALAAANKRVSNILA---KVEGELPANIDTTLCAEAAEKVLAEQVIALQAELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y D L ++ EP++ FFD V+VN ++ ++R NRL++L ++N+ L V ++ Sbjct: 627 PLFAKGEYQVALDRLAALREPVDTFFDNVMVNAENPQLRQNRLAILNNLRNLFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|323703326|ref|ZP_08114976.1| glycyl-tRNA synthetase, beta subunit [Desulfotomaculum nigrificans DSM 574] gi|323531689|gb|EGB21578.1| glycyl-tRNA synthetase, beta subunit [Desulfotomaculum nigrificans DSM 574] Length = 694 Score = 623 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 225/732 (30%), Positives = 344/732 (46%), Gaps = 71/732 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PAR A L + L+E+ ++Y ++ Y TP RL LY+K Sbjct: 1 MAKDFLLEIGIEEMPARFLAPALAQLKELTAKTLQEQRIVYGDIATYGTPRRLVLYVKDA 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +E GP G KAI GF+RS G+ + + + + AV Sbjct: 61 AEDQAPLEKEVKGPAKKAAFDIDGNPTKAIQGFMRSQGVSLED--LVVRHIGQVEYLYAV 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 R+ R DVL I P I + +PK MRW + + RP++ +L + Sbjct: 119 KREAGRPTADVLAEICPALITGLHFPKPMRWGSLE-----MRFARPIRWLLALF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + ++ +L + ITYGHRF + + + Y + +A VL+DP R+ I Sbjct: 169 DDVVPFELANLKSNRITYGHRFLTTGDLPIANPADYFDRIRKAYVLIDPVERKEVIRQQV 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+A G ++ D+DLL+EI +VEW GSFD+ YL LP ++ ++ +Q+ F Sbjct: 229 QELAAAEGGQVEMDEDLLDEITNIVEWPTALCGSFDRDYLKLPAAVLVTPMREHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L N FI V N + GN +V+ ARL DA F++ D Sbjct: 289 LGPDGQLLNKFIAVRNG-TKAYLDIVTAGNEKVLRARLADAAFFFEED------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-- 410 L KPL ++ L VVF +GT ++V RI L +A+L+ AD Sbjct: 336 --------LKKPLASKVDGLK--KVVFLEGLGTVADKVDRIGALADHLAELLGADEQQQE 385 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA +L+KADL T +V EFPELQG +G+EYA+ E+ +AI +H PR + +P Sbjct: 386 KIQRAALLAKADLVTNMVYEFPELQGVMGREYALRNGEDPDVAEAIFQHYLPRFAGDQLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +SLADK+DT++ +AI +P+GS DPYALRR LGI II E + + L Q I Sbjct: 446 NTLAGRVLSLADKMDTIVGCFAIGIQPTGSADPYALRRQALGICHIITEGNLHLSLKQMI 505 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 E + FF R+K + DR + +D +EA+L D++ Sbjct: 506 EWAYQGYSAEVELKYTLPQVAGEIEEFFKQRIKGMMSDRGLSYDTVEAVLAVGFDDITDA 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 L F + + R + I+ YL AE LY Sbjct: 566 FARGAALTSFRDQPAFNALMTAFNRANNLAKNA------TGGAINEAYLEHPAEHELYRQ 619 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ +Q + + Y + +I P+ FF+QV+V V+D ++ NRL+LL+ + + Sbjct: 620 LTALTQKVQPLIQSRDYVAALREIAAIQAPLNEFFEQVMVMVEDERIKTNRLALLKNLVD 679 Query: 691 IILIVINVQKIV 702 + V + K+V Sbjct: 680 LSKTVADFSKVV 691 >gi|170719266|ref|YP_001746954.1| glycyl-tRNA synthetase subunit beta [Pseudomonas putida W619] gi|229558569|sp|B1J425|SYGB_PSEPW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169757269|gb|ACA70585.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas putida W619] Length = 683 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 342/724 (47%), Gaps = 65/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ Sbjct: 1 MSAQDFLVELGTEELPPKALATLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQ 60 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 L P++ GP + G +A GF + G++ Q G Sbjct: 61 LDVQQPDRSINIDGPPLQAAFKDGEPTQAALGFAKKCGVELSEIDQS------GAKLRFS 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + +L TIV ++ +P PK MRW+ + ++RP + ++ +L Sbjct: 115 QHIPGKATASLLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL-----G 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++D + G + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 DQVVDCTILSQQAGRESRGHRFHHPQNVVITTPANYVEDLRKAYVLADFAERRELIAKRT 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TELAMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI V+N+++ D IV GN +VV RL DA F+K+D+ Sbjct: 285 LDSEGKLLPRFITVANVESRD-PKQIVSGNEKVVRPRLTDAEFFFKQDK----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 +PL+ RL +VVF A++GT ++ R+ L IA LI D Sbjct: 333 ---------KQPLETFNERLK--NVVFQAQLGTVYDKAERVSRLAAYIAPLIGGDAQRAG 381 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 RAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQTL 441 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 TGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTPAVEFA 501 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ F DRL+ D I ++ + + L ++ + Sbjct: 502 VKQFGAKVKAAGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALKPGSALDFDQRVQAV 561 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 F + E KR+ +L+ E I+ ++ P+Y E LY+ I Sbjct: 562 QAFRKLPEAEALAAVNKRVSNLLSKAE---GAIAEQVEPKYFDNANEFSLYSAIQQADQA 618 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V + Sbjct: 619 VQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVAD 678 Query: 698 VQKI 701 + + Sbjct: 679 ISLL 682 >gi|221638266|ref|YP_002524528.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides KD131] gi|221159047|gb|ACM00027.1| Glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides KD131] Length = 728 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 268/752 (35%), Positives = 393/752 (52%), Gaps = 77/752 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL + KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGLTRDRLET--RADKKGAVLFAVVEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL+SILC+L E +++ + L Sbjct: 119 PEIVAEVLERTIRTFPWPKSMRWG-----TGSLRWVRPLQSILCLLSDE-GGAEVVPMTL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + GN T GHRF AP V D Y L A V+LD R AI ++A A A G Sbjct: 173 DGLTAGNSTEGHRFMAPARFAVSGFDDYRAKLARAFVMLDASEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V D LL E+ GLVEW V MG+ + +L LP E+++ +++ +QK F Sbjct: 233 LEVVPDAALLSEVAGLVEWPVVLMGAIGEDFLGLPPEVLQTSMREHQKFFSVTNPATGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D G I++GN +V++ARL DA FW+ D + Sbjct: 293 EKFVTVANRETADHGETILKGNGKVLSARLSDARFFWENDLRTVKTAG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ L V FH ++G+Q +R++RI L ++IA L+ A L A ++KA Sbjct: 341 ----LEGMAEGLKQ--VTFHNRLGSQADRIARIEALAREIAPLVGASPDLAAEAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA + A + H +P GP + VPT+ +S V+LA Sbjct: 395 DLQSAMVGEFPELQGTMGTYYARAAGLPEAVAQACKAHYQPLGPSDAVPTDPVSGAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID------------------ 522 DK+DTL FWAI+EKP+GSKDP+ALRRA LG++R+ LEN++ Sbjct: 455 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVVRLNLENELRYSLKLLLLDGLVANEIAR 514 Query: 523 --------------------------IPLSQFIEDQN-----LILFFHDRLKLYLHDRDI 551 L + N L+ FFHDRLK++L ++ I Sbjct: 515 QFTHFKSETNALAGIDDVEAFKQHVTFSLDAAKDKANDLFEYLLAFFHDRLKVHLREQGI 574 Query: 552 RHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-E 609 RHD+I+A L P ND+L +V + L+ F + G L KR IL E K+ E Sbjct: 575 RHDVIDACLAMPGNDDLTLLVKRAEALSGFLKTDDGTNLLQGFKRANNILTQAEAKDGVE 634 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 S P++ +AE+ L++ + I ++ + + + ++ PI+ FF+ V Sbjct: 635 YSFGADPKFAETDAERALFSALETAEAAIGPALQAEDFAAAMSAMAALRAPIDAFFETVQ 694 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN D+ +R NRL++L I+ V ++ +I Sbjct: 695 VNADNAVLRRNRLNMLHSIRATCARVADLTRI 726 >gi|197334221|ref|YP_002154788.1| glycyl-tRNA synthetase, beta subunit [Vibrio fischeri MJ11] gi|238690288|sp|B5FEW0|SYGB_VIBFM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|197315711|gb|ACH65158.1| glycyl-tRNA synthetase, beta subunit [Vibrio fischeri MJ11] Length = 688 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 210/725 (28%), Positives = 347/725 (47%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + +Q ++ Y TP RL L + L Sbjct: 1 MAKNFLIELGTEELPPTALRSLAEAFASNFEAELKAADLAHQGVKWYATPRRLALKVAEL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++K D KG+ L Sbjct: 61 AESQADKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGITVEQAERLKTD--KGEWLLHK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++++ A+ +P PK+MRW + +IRP+K++ +L Sbjct: 119 EEVKGKPVQELVVDFAAKALAGLPIPKAMRWGNSD-----IQFIRPVKTLTILL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +++I+ + + GHRF + S D Y LE V+ D + R+ IL D Sbjct: 169 DELIEGSILGVSSARTLRGHRFMGESEFTIDSADQYPAILEERGKVMADYDARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A+AVG + + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 SEKAAAAVGGKADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKE-PRHVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ Sbjct: 386 QRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS +V++ADKLDTL+ + I + P GS DP+ALRRA LG++RII+E + ++ L + Sbjct: 446 DISASVAMADKLDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKEYNLDLVDLVAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++I F R + + D D+I+A+L +K Sbjct: 505 AQSLFGDKLSNANVATDVIDFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDKRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRELDAAESLAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKALAEKVEILAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPVFAAGNYQEALSRLAELREPVDAFFDNVMVMADDEALKTNRLTLLNKLRNLFLDIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|167031097|ref|YP_001666328.1| glycyl-tRNA synthetase subunit beta [Pseudomonas putida GB-1] gi|189082270|sp|B0KF22|SYGB_PSEPG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166857585|gb|ABY95992.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas putida GB-1] Length = 683 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 342/724 (47%), Gaps = 65/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ Sbjct: 1 MSAQDFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQ 60 Query: 59 LSPHSPEKIEERLGPR------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 L P++ GP G +A GF + G++ Q G Sbjct: 61 LDVQQPDRSINIDGPPMQAAFKDGEPTQAALGFAKKCGVELAEIDQS------GAKLRFS 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + +L TI+ ++ +P PK MRW+ + ++RP + ++ +L Sbjct: 115 QHIPGKATASLLPTIIEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL-----G 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++D + G + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 DQVVDCTILSQKAGRESRGHRFHHPENVVITTPANYVEDLRKAYVLADFAERRELISKRT 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 AELAMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI V+N+++ D IVQGN +VV RL DA F+K+D+ Sbjct: 285 LDSEGKLLPRFITVANVESRD-PKQIVQGNEKVVRPRLTDAEFFFKQDK----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 +PL+ RL +VVF A++GT ++ R+ L IA LI D Sbjct: 333 ---------KQPLETFNERLK--NVVFQAQLGTVYDKAERVSKLAAFIAPLIGGDAQRAG 381 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 RAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQTL 441 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 TGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLNLTGAVEFA 501 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ F DRL+ D I ++ + + L ++ + Sbjct: 502 VKQFGAKVKAAGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQAV 561 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 F + E KR+ +L+ E I+ ++ P+Y E LY+ I Sbjct: 562 QAFRKLPEAEALAAVNKRVSNLLSKAE---GAIAEQVEPKYFDNANEFSLYSAIQQADQA 618 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V + Sbjct: 619 VQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVAD 678 Query: 698 VQKI 701 + + Sbjct: 679 ISLL 682 >gi|77456237|ref|YP_345742.1| glycyl-tRNA synthetase subunit beta [Pseudomonas fluorescens Pf0-1] gi|123772394|sp|Q3KKF3|SYGB_PSEPF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|77380240|gb|ABA71753.1| glycyl-tRNA synthetase beta chain [Pseudomonas fluorescens Pf0-1] Length = 684 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 205/725 (28%), Positives = 335/725 (46%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + AE + L+ G+ Y++ Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKALNTLAEAFLAGIDKGLQAAGLNYESKTVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G++ Q G Sbjct: 61 LATQQPDRSINLDGPPRQAAFDADGNPTQAALGFAKKCGVELSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P PK MRW ++RP + ++ +L Sbjct: 115 SQNIAGKPTASLLPTIVEDSLNDLPIPKRMRWGARKE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++IID + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQIIDCTILAQKAGRESRGHRFHHPQSVRIGSPSSYLADLRAAYVLADANERREIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TEELATRQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDADGKLLPRFITVANIESKD-PQQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF K+G+ ++ R+ L IA I + + Sbjct: 334 ----------KQKLEAFNDRLQ--NVVFQEKLGSVYDKAERVSKLAAYIAARIGGNASWA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 ARAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPAT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ + Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLNDAVAF 501 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + ++ + + L ++ Sbjct: 502 AVNAFGAKVKAAGLNDAVLEFIFDRLRARYEDEGVGVATYLSVRALKPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ K + E+ +Y E LY+ I Sbjct: 562 VQAFRKLPEAAALAAVNKRVSNLLS---KVEGSVPTEVQAKYFDNANEFSLYSAIQQADQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y++ L ++ EP++ FFD V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAARQYNESLARLAALREPVDAFFDAVMVNAEDANVRANRYALLARLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|26986805|ref|NP_742230.1| glycyl-tRNA synthetase subunit beta [Pseudomonas putida KT2440] gi|38258507|sp|Q88RR9|SYGB_PSEPK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|24981401|gb|AAN65694.1|AE016196_5 glycyl-tRNA synthetase, tetrameric type, beta subunit [Pseudomonas putida KT2440] Length = 684 Score = 622 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 344/725 (47%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ Sbjct: 1 MSAQDFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P++ GP + G +A GF + G+ +I + K Sbjct: 61 LDVQQPDRSINIDGPPLQAAFNAEGEPTQAALGFAKKCGV---ELAEIDQSGPK---LRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + +L TIV ++ +P PK MRW+ + ++RP + ++ +L Sbjct: 115 SQHIPGKATVGLLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 GDQVVDCTILSQKAGRESRGHRFHHPENVLITTPANYVEDLRKAYVLADFAERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TAELAMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+N+++ D IVQGN +VV RL DA F+K+D+ Sbjct: 285 LLDSEGKLLPRFITVANVESRD-PKQIVQGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT ++ R+ L IA LI D Sbjct: 334 ----------KQPLETFNERLK--NVVFQAQLGTVYDKAERVSRLAAFIAPLIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 GRAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPQT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTGAVEF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D I ++ + + L ++ Sbjct: 502 AVKQFGAKIKAPGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E KR+ +L+ E I+ ++ P+Y E LY+ I Sbjct: 562 VQAFRKLPEAEALAAVNKRVSNLLSKAE---GAIAEQVEPKYFDNANEFSLYSAIQQADQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V Sbjct: 619 AVQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|59710623|ref|YP_203399.1| glycyl-tRNA synthetase subunit beta [Vibrio fischeri ES114] gi|81311051|sp|Q5E8Y5|SYGB_VIBF1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|59478724|gb|AAW84511.1| glycyl-tRNA synthetase, beta subunit [Vibrio fischeri ES114] Length = 688 Score = 622 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 210/725 (28%), Positives = 346/725 (47%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + +Q ++ Y TP RL L + L Sbjct: 1 MAKNFLIELGTEELPPTALRSLAEAFASNFEAELKAADLAHQGVKWYATPRRLALKVAEL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++K D KG+ L Sbjct: 61 AESQADKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGITVEQADRLKTD--KGEWLLHK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++++ A+ +P PK+MRW + +IRP+K++ +L Sbjct: 119 EEVKGKPVQELVVDFAAKALAGLPIPKAMRWGNSD-----IQFIRPVKTLTILL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +++I+ + + GHRF + S D Y LE V+ D + R+ IL D Sbjct: 169 DELIEGSILGVSSARTLRGHRFMGESEFTIDSADQYPAILEERGKVMADYDARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A+AVG + + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 SEKAAAAVGGKADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKE-PRHVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ Sbjct: 386 QRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V++ADKLDTL+ + I + P GS DP+ALRRA LG++RII+E + ++ L + Sbjct: 446 DISSAVAMADKLDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKEYNLDLVDLVAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++I F R + + D D+I+A+L +K Sbjct: 505 AQSLFGDKLSNANVATDVIDFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDKRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRELDAAESLAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKALAEKVEILAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPVFAAGNYQEALSRLAELREPVDAFFDNVMVMADDEALKTNRLTLLNKLRNLFLDIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|268592254|ref|ZP_06126475.1| glycyl-tRNA synthetase, beta subunit [Providencia rettgeri DSM 1131] gi|291312029|gb|EFE52482.1| glycyl-tRNA synthetase, beta subunit [Providencia rettgeri DSM 1131] Length = 689 Score = 622 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 197/722 (27%), Positives = 337/722 (46%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L + L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDGADIAHGAVTWFAAPRRLALKVADLAAS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP + G KA +G+ R G+ ++ KG+ L + Sbjct: 65 QPDREIEKRGPAISQAFGPDGQPTKAAEGWARGCGITVDQAERL--TTDKGEWLLYRAQM 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++L +V A+ K+P PK MRW+ + ++RP+ ++ +L ++ + Sbjct: 123 KGQAVSELLADMVSRALAKLPIPKLMRWADKDT-----QFVRPVHTVTLLLGSD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 ID ++ I G GHRF + + + Y L V+ D R+ I DA + Sbjct: 173 IDGEILGIKSGRTIRGHRFMGESEFTIDNAEQYPAILRERGKVMADYAERKAVIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQALGGQADLTDSLLEEVTSLVEWPVVLTAKFEEKFLDVPSEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 KTGKLMPNFIFVANIESSD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ R+ L IA I ADV RA Sbjct: 339 -------KQRLEDNLPRLET--VLFQKQLGTLRDKTDRLEALAGWIANKIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A++E +PR + +P+ +S Sbjct: 390 GLLAKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVALALKEQYQPRFSGDALPSTDVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 ++LA+K+DTL + I + P G KDP+ALRRA LG++RII+E + L + E+ Sbjct: 450 AALALAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKGYQLDLVEMTEEAAR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L +K + Sbjct: 510 LYGDKLTNKNVVNDVVEFMLGRFRSWYQELGYSIDTIQAVLARHPTQPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + + + KR+ IL+ E+K ++ + L E +L + + Sbjct: 570 FRSLEEAQALAAANKRVSNILSKSEEK---LADNVLASVLKTPEEVKLATHVVVLQDKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + L S+ + ++ FF V+V +D+ VR NRL+LL ++ + L V ++ Sbjct: 627 PMFAERNYQEALVELASLRDIVDEFFANVMVMDEDQAVRINRLTLLSQLRELFLKVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|313496432|gb|ADR57798.1| GlyS [Pseudomonas putida BIRD-1] Length = 684 Score = 622 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 344/725 (47%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ Sbjct: 1 MSAQDFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P++ GP + G +A GF + G+ +I + K Sbjct: 61 LDVQQPDRSINIDGPPLQAAFNAEGEPTQAALGFAKKCGV---ELAEIDQSGPK---LRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + +L TIV ++ +P PK MRW+ + ++RP + ++ +L Sbjct: 115 SQHIPGKATVGLLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 GDQVVDCTILSQKAGRESRGHRFHHPENVLITTPANYVEDLRKAYVLADFAERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TAELAMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+N+++ D IVQGN +VV RL DA F+K+D+ Sbjct: 285 LLDNEGKLLPRFITVANVESRD-PKQIVQGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT ++ R+ L IA LI D Sbjct: 334 ----------KQPLETFNERLK--NVVFQAQLGTVYDKAERVSRLAAFIAPLIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 GRAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPQT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTGAVEF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D I ++ + + L ++ Sbjct: 502 AVKQFGAKVKAPGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E KR+ +L+ E I+ ++ P+Y E LY+ I Sbjct: 562 VQAFRKLPEAEALAAVNKRVSNLLSKAE---GAIAEQVEPKYFDNANEFSLYSAIQQADQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V Sbjct: 619 AVQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|85057990|ref|YP_453692.1| glycyl-tRNA synthetase subunit beta [Sodalis glossinidius str. 'morsitans'] gi|123739018|sp|Q2NX38|SYGB_SODGM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|84778510|dbj|BAE73287.1| glycyl-tRNA synthase beta subunit [Sodalis glossinidius str. 'morsitans'] Length = 689 Score = 621 bits (1602), Expect = e-175, Method: Composition-based stats. Identities = 209/723 (28%), Positives = 338/723 (46%), Gaps = 61/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI +EE+P + AE +I + G L V + + + P RL + + L Sbjct: 4 HTFLVEIGTEELPPKALRALAEAFAIHISGELDAANVRHGEVSWFAAPRRLAVKVAALGG 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP + G KA +G+ R G+ ++ D KG+ + R Sbjct: 64 AQADSDVEKRGPAIAQVFDADGNPTKAAEGWARGCGITVSQAERLATD--KGEWLVYRAR 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++++L +V A+ K+P PK MRW + +IRP+ ++ +L + Sbjct: 122 VKGQPVQELLCAVVSRALGKLPIPKMMRWGDNET-----QFIRPVHTVTLLL-----DDG 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAH 233 +I ++ I I GHRF I ++ D Y + L+ V+ D R+ I DA Sbjct: 172 VIAGNVLGIDADRIVRGHRFMGEREISLEHADQYPQVLLDRGRVMADYLQRKETIRRDAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 EAAKRLGGVADLSESLLEEVTSLVEWPVVLTARFEEKFLAVPAEALVYTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V+NI++ D I+ GN +VV RL DA F+ D Sbjct: 292 DAAGNLLPHFIFVANIESKD-PQQIIAGNEKVVRPRLADAEFFFNTDH------------ 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 + L+ R+ RLD V+F ++GT ++ RI L IA I ADV R Sbjct: 339 --------KQRLEDRLPRLDT--VLFQKQLGTLRDKSDRIEALSAWIAGRIGADVPQAAR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E + A +E +PR + +PT + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEPEAVALAQKEQYQPRFAGDALPTTLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 S V++ADK+DTL + I + P G KDP+ALRRATLG++RII+E ++ + L E+ Sbjct: 449 SCAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRATLGVLRIIVEKQLPLDLQTLTEEAV 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++I F R + + ++ D I+A+L ++ ++ Sbjct: 509 RLYGEKLTNDAVVNDVIDFMLGRFRAWYQEQGHSVDTIQAVLARRPTRPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA K + + ++ L +E L + + Sbjct: 569 YFRTLEEAASLAAANKRVSNILA---KSDDPVYKDLQASVLKDPSEITLATHLVVLREKL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q + RY L ++ EP++ FFD V+V DD +VR NRL+LL ++ + L V ++ Sbjct: 626 QPLFEAGRYQDALVELAALREPVDAFFDSVMVMADDPQVRINRLTLLAQLRKLFLQVADI 685 Query: 699 QKI 701 + Sbjct: 686 SLL 688 >gi|77358988|ref|YP_338563.1| glycyl-tRNA synthetase subunit beta [Pseudoalteromonas haloplanktis TAC125] gi|123730516|sp|Q3IJ28|SYGB_PSEHT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|76873899|emb|CAI85120.1| glycyl-tRNA synthetase, beta subunit [Pseudoalteromonas haloplanktis TAC125] Length = 689 Score = 621 bits (1601), Expect = e-175, Method: Composition-based stats. Identities = 211/723 (29%), Positives = 344/723 (47%), Gaps = 62/723 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L+EI +EE+P + K AE + L L+ + +Q + Y +P RL L + Sbjct: 1 MSAQNLLVEIGTEELPPKALRKLAEAFAANLTAELETLELAHQGVSWYASPRRLGLRVIA 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L +K E+ GP + G KA G+ R G++ ++ D KG L Sbjct: 61 LDAKQQDKEVEKRGPAIKAAFDADGNPTKAAMGWARGCGIEVKDAQTLETD--KGAWLLH 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + + ++ ++ A+ K+P PK MRW + +IRP+ ++ +L Sbjct: 119 LAKVAGQETKTLMVDVINKALAKLPIPKPMRWGANKT-----QFIRPVHTVTILL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ ++ N GHRFH P I + D L+ A V+ D E R+ I Sbjct: 169 GDELVTGEVLGKQVSNQLQGHRFHHPEKITINHADDIFDVLKSAYVIADYEQRKAQIRAQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A A+ + D+DLLEE+ LVEW +F++++L +P E + T+K +QK F Sbjct: 229 IEAAAKAINAVVAMDEDLLEEVTSLVEWPVTLTATFEEEFLAVPAEALIYTMKDDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L N F+ VSNI++ D + ++ GN +VV RL DA F++ D+ Sbjct: 289 LLDQNGKLLNKFLFVSNIESKD-PSVVISGNEKVVRPRLADAQFFFESDK---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 K L+ R+ LD V+F ++GT ++ +RI L IAQ + AD L Sbjct: 338 ----------KKTLESRLESLD--SVLFQKQLGTLKDKSARISELAGYIAQQLGADKELA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EF ++QG +G YA E A E PR +++PTN Sbjct: 386 QRAGLLSKTDLMTEMVMEFTDIQGVMGMHYARFDGEAEDVALAQNEQYMPRFAGDSLPTN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP------- 524 IS V++ADK DTL+ + I + P G KDP+ALRRA +G +RI++E ++ + Sbjct: 446 LISCAVAIADKFDTLVGIFGIGQAPKGDKDPFALRRAAIGALRIMVEKELPLDILDLVAK 505 Query: 525 --------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 L+ ++ F R + + D I D+I+A+L + +K Sbjct: 506 SQTLFGDKLTNLNVSTDVFEFMLGRFRAWYQDEGIEVDVIQAVLARRPTKPVDFDRRVKA 565 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + E + KR+ ILA K + + L +AEK L A ++ F T Sbjct: 566 VSHFRTLDAAEALAAANKRVSNILA---KNDITSEGNVDESLLTDDAEKVLAAQVAKFAT 622 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + Y + L I + ++ FFD V+V DD V+ NRL+LL + + L + Sbjct: 623 ELAPLYASGNYQEALSQLAGIRQSVDSFFDNVMVMADDEAVKQNRLALLSQLSGLFLGIA 682 Query: 697 NVQ 699 ++ Sbjct: 683 DIS 685 >gi|119947319|ref|YP_944999.1| glycyl-tRNA synthetase, beta subunit [Psychromonas ingrahamii 37] gi|166227922|sp|A1T0Y5|SYGB_PSYIN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|119865923|gb|ABM05400.1| glycyl-tRNA synthetase, beta subunit [Psychromonas ingrahamii 37] Length = 688 Score = 621 bits (1601), Expect = e-175, Method: Composition-based stats. Identities = 211/724 (29%), Positives = 350/724 (48%), Gaps = 63/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L+E+ +EE+P + + AE + + L + + + ++R +P RL L + Sbjct: 1 MAQENLLIELGTEELPPKSLRQLAESFASNVEAELNKAELSFDSVRWLASPRRLALVIAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS +KI E+ GP V G KA G+ RS G+ ++ D KG+ L Sbjct: 61 LSDSQADKIVEKRGPAVNVAFDAEGQATKAAQGWARSNGITVEQAERLITD--KGEWLLF 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +++ I A+ K+P K MRW + S+ +IRP+ ++ + + Sbjct: 119 KSEVKGLSVAELIPEIAANALAKLPISKPMRWGS-----SSTQFIRPVHTVTMLFGS--- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 ++I +L + I GHRF + + D Y L++ V++D E R+ I + Sbjct: 171 --RLIQGELLGVASDRIIRGHRFLGEAELIIDHADQYETLLDDSGKVIVDYERRKAIIRD 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 LA+ D+ LLEE+ LVEW +GSF+ K+L +P E + T+K NQK F Sbjct: 229 QVEALAAHENGVADIDESLLEEVTSLVEWPVTLVGSFEDKFLDVPSEALIYTMKDNQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++G L FI VSNI + D A ++ GN +V+ RL DA F++ D+ Sbjct: 289 PVLDKDGKLLPRFIFVSNIVSRD-PAQVISGNEKVIRPRLADAEFFFETDK--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L R+ L V+F K+GT E+ RI + + IA I AD Sbjct: 339 -----------KKTLASRLESLS--SVLFQQKLGTLKEKSERIANVAEDIALQIKADTKH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T++V EFP++QG +G YA+ E A+ E PR + +PT Sbjct: 386 AQRAGLLSKTDLMTDMVMEFPDVQGIMGMHYALHDGEEQEVAIALNEQYLPRFAGDKLPT 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ VSLADKLDTL+ + I + P G+ DP+ALRRA +G++RII +D+ L + +E Sbjct: 446 SLVACAVSLADKLDTLVGIFGIGQAPKGAADPFALRRAAIGLLRIITNKNLDLDLVELVE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 Q+++ F R + +LI+++L + ++ Sbjct: 506 IAKLQYGHKLTNDNVVQDVVDFLFARFRATYQANGYSVELIQSVLVRRPTKPVDFEKRLQ 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + +F + + + KRI ILA K EI+ ++ P L AE +L ++ Sbjct: 566 AVAKFQTLPEAAPIAAANKRISNILA---KVKGEINAQVDPSLLQEPAEIKLSEILGSLE 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + ++ D+ Y L S+ EP++ FFD V+V +D ++ NRL++L ++N+ L + Sbjct: 623 STLRPLFDNLDYESALFELASLNEPVDEFFDNVMVMAEDPAIKANRLAILNRLRNLFLQI 682 Query: 696 INVQ 699 +V Sbjct: 683 ADVS 686 >gi|332163498|ref|YP_004300075.1| glycyl-tRNA synthetase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607999|emb|CBY29497.1| glycyl-tRNA synthetase beta chain [Yersinia enterocolitica subsp. palearctica Y11] gi|325667728|gb|ADZ44372.1| glycyl-tRNA synthetase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861718|emb|CBX71892.1| glycyl-tRNA synthetase beta subunit [Yersinia enterocolitica W22703] Length = 689 Score = 620 bits (1600), Expect = e-175, Method: Composition-based stats. Identities = 200/722 (27%), Positives = 329/722 (45%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL + + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELNSANLPHGEVVWYAAPRRLAVKVANLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQLLLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + + D Y + LE V+ D E R+ I DA Sbjct: 173 IPGTVLGIDSDRVIRGHRFMGESEFALDNADQYPQVLLERGKVIADYELRKAIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 TAGHLLPNFIFVTNIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 339 -------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RI++E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRILVEKNLPLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNTKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K +++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDKLNDHVRASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E ++ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYQEALVELAALRETVDEFFESVMVMDEDDAVRVNRLTLLSKLRELFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|104779330|ref|YP_605828.1| glycyl-tRNA synthetase subunit beta [Pseudomonas entomophila L48] gi|166227918|sp|Q1IH28|SYGB_PSEE4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|95108317|emb|CAK13011.1| glycyl-tRNA synthetase, beta chain [Pseudomonas entomophila L48] Length = 684 Score = 620 bits (1600), Expect = e-175, Method: Composition-based stats. Identities = 206/725 (28%), Positives = 340/725 (46%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + L+ G+ Y + + Y P RL + L+ Sbjct: 1 MSAQDFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTSKQVYAAPRRLAVLLRQ 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P++ GP G +A GF + G++ Q G Sbjct: 61 LDVQQPDRSINIDGPPRQAAFDAEGNPTQAALGFAKKCGVELSDIDQS------GPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + +L TIV ++ +P PK M W + ++RP + ++ +L Sbjct: 115 SQHIPGKATASLLPTIVEDSLNDLPIPKRMHWGASRE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 GDQVVDCTILAQKAGRESRGHRFHHPENVVITTPANYVEDLRKAYVLADFAERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TAELAMQQEGSAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+N+++ D IV+GN +VV RL DA F+K+D+ Sbjct: 285 LLDSEGKLLPRFITVANVESRD-PKQIVEGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT ++ R+ L IA I A Sbjct: 334 ----------KQPLESFNERLK--NVVFQAQLGTVFDKAERVSKLAAFIAPYIGGSAANA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 GRAGLLSKCDLASEMVGEFPEMQGIAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTTAVEF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D I ++ + + L ++ Sbjct: 502 AVKQFGTKVKAAGLSEQVLEFIFDRLRARYEDEGIDVATYLSVRALKPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + KR+ +L K I+ ++ P+Y E LY+ I Sbjct: 562 VQAFRKLPEANALAAANKRVSNLL---GKAEGAIADQVEPKYFDNANEFSLYSAIQQADQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y++ L ++ +P++ FF+ VLVN +D +VR NR +LL ++ + L V Sbjct: 619 AVQPMASARQYNEALARLAALRDPVDAFFEAVLVNAEDAKVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|209964965|ref|YP_002297880.1| glycyl-tRNA synthetase, beta subunit GlyS [Rhodospirillum centenum SW] gi|238064854|sp|B6INH0|SYGB_RHOCS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|209958431|gb|ACI99067.1| glycyl-tRNA synthetase, beta subunit GlyS [Rhodospirillum centenum SW] Length = 714 Score = 620 bits (1600), Expect = e-175, Method: Composition-based stats. Identities = 267/740 (36%), Positives = 394/740 (53%), Gaps = 67/740 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+E++ EEIPARMQ +A ED ++ L G+ +Q + TP R+ L ++G+ Sbjct: 1 MAELLIELFMEEIPARMQVRAGEDFRRLVTDRLAAAGIQFQRAEVHTTPRRIALVVEGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVG+ ++A+ GFLR+ GL IS + ++D KG Y AV+ KP Sbjct: 61 ARQADVREERKGPRVGSPEQALQGFLRAAGLTDISQAE-QRDTGKGVFYFAVIEKPGGAT 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D L ++ AI+ +PWPKSMRW T F W+RPL IL + + + Sbjct: 120 IDALPALIDGAIRDLPWPKSMRWGTNQ-----FRWVRPLHGILALFDGQVVPGGLTIGTA 174 Query: 181 KE-------------------IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDP 221 + I GN T GHRF +P + V S + Y L A V+LD Sbjct: 175 EPPPETSEGNACLAGEATARVIRYGNETKGHRFLSPDTLTVTSFEDYKAKLRGAHVILDR 234 Query: 222 ECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRL 281 E R+ IL A A A GL L +D LLEE+ GLVEW V +G D++++ +P E++ Sbjct: 235 EERKQLILAGARAAAEAEGLVLKDDPGLLEEVAGLVEWPVVLVGGIDEQFMDVPAEVLTT 294 Query: 282 TIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQ 341 +++T+Q+ F T +G LA F++V+N DGGAA+V GN RV+ ARL DA FW +D Sbjct: 295 SMRTHQRYFALETTQGKLAPRFVVVANRPTVDGGAAVVAGNERVLRARLSDAKFFWDQD- 353 Query: 342 NNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA 401 L+ PL+ R L D+ FH K+GT ER RI L +IA Sbjct: 354 -------------------LATPLETRRQAL--ADIKFHEKLGTMLERAERIEALAVEIA 392 Query: 402 QLIDADVALVDR---AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 + + D ++R A L KADL T +V EFPE+QG +G A Q+ DAI +H Sbjct: 393 RTLGLDTGALERVRIAARLCKADLVTGVVGEFPEVQGILGGHVARAQDLPADVADAIADH 452 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +P GP + VP + +++ V+LADK+DTL+ F+AI+EKP+GS+DP+ALRRA LG+IR+I+E Sbjct: 453 YRPLGPSDRVPADPVAVAVALADKIDTLVAFFAIDEKPTGSRDPFALRRAALGVIRLIVE 512 Query: 519 NKIDIPLSQFIEDQ--------------NLILFFHDRLKLYLHDRDIRHDLIEAILRP-E 563 N + L +L+ FF DRLK+ L ++ +RHDLI+A+ Sbjct: 513 NGLRASLLPLFGRAAVAVPAAAGETVGGDLLSFFADRLKVALKEKGVRHDLIDAVFGLGG 572 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE--ISLEISPQYLLL 621 D+L+ ++ + L F +S G L++ +R IL IEEKK+ I L Sbjct: 573 QDDLVLLLKRVDALAGFVASEDGANLLVAYRRAANILRIEEKKDGVSYSGGGIDAGRLEQ 632 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 E+ L A + + + + + LL ++ P++ FFD+V VN D +R NR Sbjct: 633 AEERALAAALDATAADLAPLLAAEDFTGAMRLLSALRGPVDAFFDKVTVNAPDAVLRANR 692 Query: 682 LSLLQYIKNIILIVINVQKI 701 L LL I++ + V + +I Sbjct: 693 LRLLARIRDTLNGVADFSRI 712 >gi|269103825|ref|ZP_06156522.1| glycyl-tRNA synthetase beta chain [Photobacterium damselae subsp. damselae CIP 102761] gi|268163723|gb|EEZ42219.1| glycyl-tRNA synthetase beta chain [Photobacterium damselae subsp. damselae CIP 102761] Length = 689 Score = 620 bits (1599), Expect = e-175, Method: Composition-based stats. Identities = 215/722 (29%), Positives = 345/722 (47%), Gaps = 62/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + LK + + + + P RL L + L+ + Sbjct: 5 NFLIELGTEELPPKALRTLAEAFAANFEAELKAADLAHNGIEWFAAPRRLALKVNALAEN 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+KI E+ GP + G KA G+ R G+ ++ D KG+ L Sbjct: 65 QPDKIVEKRGPAIASAFDADGNPTKAAQGWARGNGITVEQAERLVTD--KGEWLLFKQEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L + A+ K+P PK MRW + +IRP+K++ +L +++ Sbjct: 123 KGQEAKALLPELATNALAKLPIPKPMRWGDKET-----QFIRPVKTLTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 ++ + + GHRF + + D Y LE V+ D E R+ I+ DA + Sbjct: 173 VEGTILGVDSARTIRGHRFMGESEFTIDNADQYPAILEERGKVMADYEARKAIIVADAQK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A VG D +L+EE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAQEVGGIADLDDELVEEVTSLVEWPVVLTASFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI VSN+ + D + I+ GN +VV RL DA F+ D+ Sbjct: 293 AEGNLVPKFIFVSNLISKD-PSQIIAGNEKVVRPRLADAEFFFNTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R+ +L+ +F K+GT ++ RI L IA IDADV RA Sbjct: 339 -------KRPLIDRLPQLETA--IFQQKLGTIKDKTDRITELAGFIAAKIDADVDNAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E PR + +P+ +S Sbjct: 390 GLLSKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVALALNEQYMPRFAGDELPSTGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++ADKLDTL+ + I + P GS DP+ALRRA LG++RII+E ++ L + + Sbjct: 450 AAVAMADKLDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKGYNLDLVELVAKAHE 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++I F R + + D D+I+A+L +K ++ Sbjct: 509 LYGDKLSNDNVESDVIEFMLGRFRAWYQDEGFSVDVIQAVLALHPTKPADFDQRVKAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E+ + L+ +AEK L A I+ ++ Sbjct: 569 FRELDAAESLAAANKRVGNILA---KFDGELPAQWDNALLVEDAEKTLAADIAAMQATLE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q L S+ EP++ FFD V+V DD +++ NRL++L ++N+ L V ++ Sbjct: 626 PAFAAGNYQQALTELASLREPVDAFFDNVMVMADDEKLKVNRLTMLNALRNMFLQVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|238765095|ref|ZP_04626030.1| Glycyl-tRNA synthetase beta subunit [Yersinia kristensenii ATCC 33638] gi|238696712|gb|EEP89494.1| Glycyl-tRNA synthetase beta subunit [Yersinia kristensenii ATCC 33638] Length = 689 Score = 620 bits (1599), Expect = e-175, Method: Composition-based stats. Identities = 203/722 (28%), Positives = 328/722 (45%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDSANLPHGEVIWYAAPRRLALKVINLSAS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLITD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQLLLAGMVSTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I I GHRF + + D Y + LE V+ D E R+ I DA Sbjct: 173 IPGTVLGIDSDRIIRGHRFMGESEFALDNADQYPQVLLERGKVIADYELRKAIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 TAGNLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 339 -------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNTKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E ++ FFD V+V ++ VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYQEALVELAALRETVDEFFDSVMVMDENDAVRVNRLTLLSKLRELFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|118581462|ref|YP_902712.1| glycyl-tRNA synthetase subunit beta [Pelobacter propionicus DSM 2379] gi|118504172|gb|ABL00655.1| glycyl-tRNA synthetase beta chain [Pelobacter propionicus DSM 2379] Length = 687 Score = 620 bits (1599), Expect = e-175, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 344/725 (47%), Gaps = 67/725 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + LEI +EEIPA +A ++ ++ L + Y ++ TP RL L +K + Sbjct: 4 KELFLEIGTEEIPAGFIPRAMAEMEAMITRELTNARLSYSTVQTMATPRRLALVVKDIPA 63 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+ GP G KA +GF R G+ + KG+ Sbjct: 64 VQPDAEITATGPSKKAAFDADGKPTKAAEGFARGQGVTVDQLQIV--TTDKGEYLAVTKT 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L I+P I +P+ KSMRW + RP+ I+ + Sbjct: 122 ETGRPTPELLSEILPAMIASIPFKKSMRWGDLD-----VRFARPIHWIVALFDGI----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ I G+++ GHRF A V++ HY+ + E V++DPE R+ I ++HR Sbjct: 172 VVPFVFGNIESGSVSRGHRFMANTSFPVRNFSHYLDECERHFVIVDPERRKELIRRESHR 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+A G L+ D++LLE+I LVE+ G+F +++L +P+E++ +++++Q+ F Sbjct: 232 VAAAAGGHLLPDEELLEQITYLVEYPSAVHGTFSREFLKVPKEVLITSMRSHQRYFSIVD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI ++N D +V+GN RV+ ARL DA F++ DQ Sbjct: 292 GQGNLMPGFITINNTLTDD-PGVVVKGNERVLRARLSDARFFFEEDQ------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALVDR 413 LD+R+ L VV+ K+GT E++ R R L +++A ++ A + R Sbjct: 338 -------KVKLDERVEELK--KVVYQQKLGTSFEKMERFRALAEELADRLNPAVKSETSR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL + +V EFPE+QG +G+EYA+L+ E+ AI EH P +P + I Sbjct: 389 AAWLCKADLVSGMVGEFPEVQGIMGREYALLEGESGDVACAIAEHYLPIQAGGELPASDI 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 VS+ADKLDT+ +++ P+G+ DPYALRRAT+GII IIL+ + L+ I+ Sbjct: 449 GAFVSIADKLDTICGCFSVGLIPTGAADPYALRRATIGIIAIILDRGYRLGLASLIDRSL 508 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ FF R L D +EA + E D+L+ + + Sbjct: 509 DLLEAKLLRPKEQVATEVLEFFRGRFVNLLGGE-FDADAVEAAVSAEFDDLVDVKSRVAA 567 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L +F S E ++ KRI I+ + P AE LY + Sbjct: 568 LAQFKSHPDFEPLAVAFKRIGNIIK------GGTDALVDPSLFQDAAEGALYQAFHEVKV 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 H+ ++ + + + P++ FFD+V+V +D+ VR NRL+LL I + + Sbjct: 622 HVSALVEQGAWQDALTRIAGLRAPVDGFFDKVMVMAEDQRVRSNRLALLTAIDRMFGRIA 681 Query: 697 NVQKI 701 + +I Sbjct: 682 DFSRI 686 >gi|95929742|ref|ZP_01312483.1| Glycine--tRNA ligase [Desulfuromonas acetoxidans DSM 684] gi|95134038|gb|EAT15696.1| Glycine--tRNA ligase [Desulfuromonas acetoxidans DSM 684] Length = 688 Score = 620 bits (1599), Expect = e-175, Method: Composition-based stats. Identities = 205/727 (28%), Positives = 338/727 (46%), Gaps = 67/727 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LEI +EEIPA M A DL ++ L V + ++ Y TP RL L + + Sbjct: 1 MAKELFLEIGTEEIPAGMLPVAMRDLERMMRKELTNARVAFGDVTTYATPRRLVLSVADV 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + GP V G KA GF RS G+ +++ +KG Sbjct: 61 AEEQERQELNLSGPSVKVAFDADGNPTKAALGFARSNGVDVSE--LTQQETEKGTYLFLS 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + I++ L I+ + + + KSMRW + RP+ ++ + E Sbjct: 119 KVIEGQPIKEQLPEIMERIVSSLSFKKSMRWKDLD-----VRFARPVHWLIALFGGE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + GN +YGHRF AP V LD ++ E V++DPE R+ I + Sbjct: 171 --VIPFSWGNLTSGNTSYGHRFMAPAGFDVTGLDDFVAKAREHFVIVDPEERKQIIAREI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R+A G L D+DLLEE+ LVE GSF++++L LP+EL+ ++K +Q+ F Sbjct: 229 ERVAGEEGGALNVDEDLLEEVAYLVEDPTPLCGSFEEEFLQLPDELLITSMKEHQRYFTL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI +SN + +D +V+GN RV+ ARL DA+ FWK DQ Sbjct: 289 ADTEGRLLPKFITISNTRPTD-PDVVVKGNERVLRARLSDAMFFWKEDQ----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALV 411 PL+ R+ L +VV+ A++GT +V R L + +A D++V L Sbjct: 337 ---------KTPLENRLEALK--NVVYQAQLGTSYAKVQRFTALAEDLASQFDSEVVELT 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L K DL T +V EFPELQG +G+EYA ++ E+ AI EH P ++P++ Sbjct: 386 RRAAQLCKCDLETGMVYEFPELQGVMGREYAAIEGEDPRVAKAIFEHYLPVQAGGDLPSD 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 + VS+ADK+DT+ + + P+G+ DPYALRR +G++ I+L+ + + + + Sbjct: 446 NVGAFVSIADKIDTICGCFGVGLIPTGTADPYALRRCAIGVLNILLDRGFTVSIPELVAK 505 Query: 532 Q-----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +++ F R + + D++EA+L DN++ I Sbjct: 506 AVKQLEDKLNRSVEEVTADVVEFIRLRFVNMMTGPETATDVVEAVLAARFDNVMDARQRI 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L+ + E + KR+ I+ ++ + + + E+ +Y + Sbjct: 566 EALSAMKQQPEFEALAATFKRVGNIIK------GGVTDAVDAECFEQDCEREMYGALQQV 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + M Y + S+ ++ FFD V+V +D V+ NRL+LL + + Sbjct: 620 QQDVARLMADGDYPGALRAIGSLRPAVDAFFDGVMVMAEDEAVKRNRLALLTQVAGLFAG 679 Query: 695 VINVQKI 701 + + +I Sbjct: 680 LADFSRI 686 >gi|146305055|ref|YP_001185520.1| glycyl-tRNA synthetase subunit beta [Pseudomonas mendocina ymp] gi|166227919|sp|A4XN72|SYGB_PSEMY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145573256|gb|ABP82788.1| glycyl-tRNA synthetase beta chain [Pseudomonas mendocina ymp] Length = 684 Score = 620 bits (1599), Expect = e-175, Method: Composition-based stats. Identities = 210/723 (29%), Positives = 342/723 (47%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + LK G+ Y R Y P RL + ++ Sbjct: 1 MSAKDFLVELGTEELPPKALKSLGDAFLAGIEKGLKAAGLNYAASRVYAAPRRLAVLVEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L ++ GP + G +A GF R G+ I + + G Sbjct: 61 LEEQQADRSMNLDGPPIQAAFDADGNPTQAALGFARKCGVD------IAEIDRSGAKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + ++L TIV ++ +P PK MRW+ ++RP + ++ + Sbjct: 115 AQHIPGQPAVNLLPTIVQDSLNDLPIPKRMRWAARRD-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + ++D ++ G ++ GHRFHA +++ S +Y DL A VL D RR I Sbjct: 165 GDAVVDCEILAQKAGRVSRGHRFHANREVRISSPANYAEDLRSAYVLADFAERREIISRR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+A + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELAAAEQGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALISTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAGGKLLPRFITVANIESKD-PAQIVSGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA+ + D A Sbjct: 334 ----------KQKLEGFNQRL--ANVVFQAQLGSVFDKAQRVSALAGFIAREVGGDEARA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P+ Sbjct: 382 ARAGLLSKCDLATEMVGEFPEMQGIAGYYYALNDGEPQDVALALNEQYMPRGAGAELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E +D+ L+ ++ Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKGLDLDLAAAVDF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F DRL+ D I + +A+ + L ++ Sbjct: 502 AVAQYAGKVKSDGLAAQVLEFIFDRLRARYEDEGIEVAVYQAVRAVNPTSPLDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KR+ +L+ E ++ ++ Y +E L+A I Sbjct: 562 VQAFRKLPQAEALAAANKRVSNLLSKAE---GGVAAQVEAHYFDNPSEFALHAAIQQADQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y++ L S+ EP++ FF+ VLVN +D VR NR +LL ++ + L V Sbjct: 619 AVQPLAAARQYNEALAKLASLREPVDAFFEAVLVNAEDARVRANRYALLARLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|90019661|ref|YP_525488.1| glycine--tRNA ligase [Saccharophagus degradans 2-40] gi|89949261|gb|ABD79276.1| Glycyl-tRNA synthetase, beta subunit [Saccharophagus degradans 2-40] Length = 690 Score = 620 bits (1599), Expect = e-175, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 345/724 (47%), Gaps = 61/724 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + + + L + Y + Y TP RL +++K L Sbjct: 1 MSYEFLVELGTEELPPTALKTLSNAFTQGICNGLDSAKLSYSAVESYATPRRLAVWVKDL 60 Query: 60 SPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +P + + GP GA KA + F + G++ ++ K D + Sbjct: 61 AQSTPVEDLKVWGPPAAIAFKDGAPTKAAEAFAKKNGVEVSELAT--ENDGKADKLVVNA 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + D+L+ IV ++ +P K MRW S ++RP+ + +L + Sbjct: 119 KAGGEAAADLLEGIVNASLAALPISKRMRWGA-----SRAEFVRPVHWAIMLL-----ND 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYI-RDLEEAMVLLDPECRRNAILNDA 232 ++ L GN+T GHRFHA I +Q+ Y LE+ V+ E RR I Sbjct: 169 DVLPATLLGKATGNVTRGHRFHANTDITIQNAQSYASTLLEQGKVVASFEDRRATIAKQV 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A ++G E V DLL+E+ LVEW G FD+ +L +P E + ++K +QK F Sbjct: 229 AEQAKSLGGEAVISDDLLDEVSALVEWPVALGGRFDESFLSVPAEALISSMKEHQKYFHV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI VSNI+++D A ++ GN RV+ RL DA F++ D+ Sbjct: 289 VDSKGALLPYFITVSNIESTD-PAQVIDGNERVIRPRLADAAFFFETDK----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L+ R +L VVF AK+GT ++ RI L + IA + D + Sbjct: 337 ---------KSSLEARREKLK--SVVFQAKLGTIYDKTQRITGLSQHIADKLSIDASNAV 385 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L K+DL + +V EFPE+QG G YA+ EN + AI E P+ + +P + Sbjct: 386 RAAQLCKSDLVSNMVYEFPEMQGIAGYSYALNDGENETVAQAIVEQYMPKFAGDTLPASD 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 V+LAD+LDT+ + I + P+GSKDP+ALRRA+LG +R+++E ++ L I Sbjct: 446 EGTIVALADRLDTITGIFGIGQTPTGSKDPFALRRASLGALRLLVEKGYELDLRDLITQA 505 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++++ + +R K + + +I ++ +A+ + L I + + + Sbjct: 506 AGQFSDLPKADSVVEDVLAYMLERFKAWYEEANIPSEVFQAVSAKQLSTPLDINNRVYAV 565 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 N F+S + + KR+ ILA K + E++ E+ L AE L + T Sbjct: 566 NSFYSLPQAAALASANKRVSNILA---KNDAEVAGEVDAALLTEAAEIALAKQVQKMQTA 622 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + + Y Q L + E ++ FFD V+V DD VR+NRL+LL ++ + L V + Sbjct: 623 VTPLLAERNYEQALTTLAGLREAVDSFFDDVMVMTDDLAVRNNRLALLSKLRELFLHVAD 682 Query: 698 VQKI 701 + + Sbjct: 683 ISLL 686 >gi|56459117|ref|YP_154398.1| glycyl-tRNA synthetase subunit beta [Idiomarina loihiensis L2TR] gi|81821718|sp|Q5QY35|SYGB_IDILO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|56178127|gb|AAV80849.1| Glycyl-tRNA synthetase, beta subunit [Idiomarina loihiensis L2TR] Length = 688 Score = 620 bits (1598), Expect = e-175, Method: Composition-based stats. Identities = 218/721 (30%), Positives = 369/721 (51%), Gaps = 60/721 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + + L + LK + + ++ Y TP RL + +K + Sbjct: 5 NLLIELGTEELPPKALKSLRDSLKSGIESGLKNAELSFDSIEAYATPRRLAVLVKQVETE 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP + G KA +G+ RS G+ ++K D KG+ L Sbjct: 65 QQDKEVEKRGPAINVAFDDTGKPTKAAEGWARSNGITVEQADRLKTD--KGEWLLHKATV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +++ I+ AI+ +P PK MRW S +IRP+ ++ +L +E + Sbjct: 123 KGQALSVLVQGILEAAIKALPIPKPMRWGD-----STAQFIRPVHTLTVMLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ID ++ E GHRFH+P ++ +D+Y+ L EA V+ + E R I ++ RL Sbjct: 173 IDAEILETKSARFIQGHRFHSPQGFELDHVDNYLFKLREAKVIANFEERIETIQSEVSRL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS +G ++++D +L+EE+ LVEW SFD+ +L +P+E + +T+K +Q+ F Sbjct: 233 ASELGGQVIQDDELVEEVAALVEWPVALTASFDQGFLAVPKEPLIVTMKDDQRYFPVEDG 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI ++NI++ D I++GN +VV RL DA F++ D+ Sbjct: 293 KGNLLPQFIFITNIESRD-PQQIIKGNEKVVRPRLADAQFFFESDK-------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+A LD V+F ++G+ G++ RI VL KIA + ADV +RA Sbjct: 338 ------KVTLESRVAALD--SVLFQKQLGSIGDKARRISVLAGKIANQLTADVKASERAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L KADL +++V EFPE QG +GK YA+ E+ +AIE+H PR + +P K + Sbjct: 390 LLCKADLVSDMVSEFPETQGVMGKHYALNDGESPVVAEAIEQHYWPRFSGDELPLTKEAC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LADKLDTL+ + I + P G +DP+ALRRA LG++R ++E K+ + L + + Sbjct: 450 AVALADKLDTLVGIFGIGQVPKGDRDPFALRRAALGLLRTLVERKLSLDLHELLAASVEG 509 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ F R + + D+ I D+I+++L +K + F Sbjct: 510 FGDKLSNNTVATDVFDFLLGRFRPWYQDQGITVDVIQSVLARSPSKPTDFDQRVKAVQSF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + KR+ ILA K + EIS + L E+E LY ++ ++ Sbjct: 570 KSMDSAASLAAANKRVGNILA---KSDEEISGNVDEALLQEESETTLYRLVKQTEGAVKP 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + +Y L + EP++ FF+ V+VN DD +VR NRL+LL ++ + L + ++ Sbjct: 627 LIAAGKYSDALTHLSELKEPVDAFFEHVMVNADDDKVRINRLNLLFRLRQLFLEIADISL 686 Query: 701 I 701 + Sbjct: 687 L 687 >gi|110832869|ref|YP_691728.1| glycyl-tRNA synthetase [Alcanivorax borkumensis SK2] gi|110645980|emb|CAL15456.1| glycyl-tRNA synthetase [Alcanivorax borkumensis SK2] Length = 690 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 214/726 (29%), Positives = 350/726 (48%), Gaps = 63/726 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L+E+ +EE+P + + L+ + L E G+ + + ++ P RL L ++ L Sbjct: 1 MSRDLLIELGTEELPPKALASLSAALTDEFVRQLDEAGLNHGAVERFAAPRRLALLVRDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 ++ ER GP V G KA GF S GL D ++D KG+ +A Sbjct: 61 DEKQADRDIERQGPAVQAAFDSDGNPTKAAQGFAASLGLTV--DQLGRQDTGKGERLVAQ 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + + +++ +IQK+P PK MRW ++RP ++ + Sbjct: 119 ITEQGKSAAELIPAFFTQSIQKLPIPKRMRWGKRK-----VQFVRPAHWLVALF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILND 231 +++I +L ++ G +YGHRFHAP I++ S Y + + + VL D + R+ I Sbjct: 169 DEVIPFELLDLQSGRTSYGHRFHAPGAIELASASEYAQRIENDGHVLADFDRRKAMIKEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 G + DLL E+ LVEW + MGSFD +L +P+E + ++ +QK F Sbjct: 229 TLAAGKEAGGVAQINPDLLNEVTALVEWPEALMGSFDDDFLRVPQEALISAMEEHQKYFS 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI +SNIQ+ D ++ GN +V+ RL DA F+ D Sbjct: 289 VLDNDGKLMPRFITISNIQSKD-PQQVIHGNEKVIRPRLADAAFFYDND----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L Q L +VVF ++GT E+ RI L IA+ I DV Sbjct: 337 ---------CKRTLAQHAEGL--TNVVFQQQLGTVAEKCERIGGLAAVIAENIGGDVDNA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 A LSKADL +E+V EF +QG +G A + + +A+ E PR + +P + Sbjct: 386 KLAGKLSKADLNSEMVGEFDTMQGIMGFYLAQREGQPKEVANALYEQYLPRFAGDTLPQS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 K + VSLADK+DTL+ + I +KPSG+KDPYALRRATLG++RII+E+++ + L + ++ Sbjct: 446 KTGMAVSLADKIDTLVGIFGIGQKPSGTKDPYALRRATLGVLRIIIEHELALDLRELLDK 505 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN--DNLLTIVDLIK 575 + F R + ++ I +I ++L ++ L +K Sbjct: 506 AAEQLGERIDTAQVDDAFEFIKGRYRAIYQEQGIATPVILSVLAIDDACRKPLDFDRRVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KR+ ILA E E EI L EAEK L ++ Sbjct: 566 AVAAFQQRDEAQALAAANKRVSNILAKLETAPAE---EIDGALLEDEAEKTLTNMVVAAF 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 E ++ Y + ++L + EP++ FFD V+V +D VR+NRL+LL +++++ L V Sbjct: 623 EQTYELLEAGDYASVLEMLAQLREPVDTFFDTVMVMAEDEAVRNNRLALLAFLRDLFLNV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|253987711|ref|YP_003039067.1| glycyl-tRNA synthetase subunit beta [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779161|emb|CAQ82321.1| glycyl-trna synthetase beta chain (glycine--trna ligase beta chain (glyrs) [Photorhabdus asymbiotica] Length = 689 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 201/722 (27%), Positives = 333/722 (46%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + TP RL L + L Sbjct: 5 TFLVEIGTEELPPKALRSLAEAFAANFAAELDNANLAHGEVSWFATPRRLALKVANLDEA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPTKAAEGWARGCGITAAQAERLVTD--KGEWLLYRALV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++++L +V A+ K+P PK MRWS + ++RP+ ++ + ++ Sbjct: 123 KGLSVKELLAGMVNNALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLF-----GNEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ D+ I + GHRF + + + Y L++ V+ D R+ I D + Sbjct: 173 IEGDILGIKSTRVIRGHRFMGESEFTIDNTEQYPEILQQRGKVMADYVTRKALIKQDVEQ 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAVKLGGIADISDSLLEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 HAGKLMANFIFVANIESSD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 339 -------KQRLEDNLPRLET--VLFQKQLGTLRDKTDRIQALAGWIAEKIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ IS Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVALALNEQYQPRFAGDELPSTGIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG +RII+E K+ + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGALRIIVEKKLPLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + ++ D I+A+L +K + Sbjct: 510 LYGDKLTNAKVIDDVVEFMLGRFRAWYQEQGYSIDTIQAVLARRPTQPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K ++ ++S L E +L + + Sbjct: 570 FRTLDEATALAAANKRVSNILA---KSEETLNEKVSASVLKAPEEVKLATHLVVLQDKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ E ++ FFD V+V +D++VR NRL+LL ++ + L V ++ Sbjct: 627 PLFAEGCYQEALVELASLREVVDAFFDNVMVMDEDQQVRVNRLTLLSELRELFLKVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|325275347|ref|ZP_08141297.1| glycyl-tRNA synthetase subunit beta [Pseudomonas sp. TJI-51] gi|324099518|gb|EGB97414.1| glycyl-tRNA synthetase subunit beta [Pseudomonas sp. TJI-51] Length = 683 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 343/724 (47%), Gaps = 65/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ Sbjct: 1 MSAQDFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQ 60 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 L P++ GP + G +A GF + G+ +I + K Sbjct: 61 LDVQQPDRSINIDGPPLQAAFKDGEPTQAALGFAKKCGV---ELAEIDQSGPK---LRFS 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + +L TIV ++ +P PK MRW+ + ++RP + ++ +L Sbjct: 115 QHIPGKATVGLLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL-----G 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++D + + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 DQVVDCTILSQKADRESRGHRFHHPENVLITAPANYVEDLRKAYVLADFAERRELISKRT 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 AELAMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI V+N+++ D IVQGN +VV RL DA F+K+D+ Sbjct: 285 LDSEGKLLPRFITVANVESRD-PKQIVQGNEKVVRPRLTDAEFFFKQDK----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 +PL+ RL +VVF A++GT ++ R+ L IA LI D Sbjct: 333 ---------KQPLETFNERLK--NVVFQAQLGTVYDKAERVSKLAAFIAPLIGGDAQRAG 381 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 RAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQTL 441 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 TGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLNLTGAVEFA 501 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ F DRL+ D I ++ + + L ++ + Sbjct: 502 VKQFGAKVKAAGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQAV 561 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 F + E KR+ +L+ E I+ ++ P+Y E LY+ I Sbjct: 562 QAFRKLPEAEALAAVNKRVSNLLSKAE---GAIAEQVEPKYFDNANEFSLYSAIQQADQA 618 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V + Sbjct: 619 VQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVAD 678 Query: 698 VQKI 701 + + Sbjct: 679 ISLL 682 >gi|320326674|gb|EFW82719.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. glycinea str. B076] gi|320331351|gb|EFW87294.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. glycinea str. race 4] Length = 684 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 207/725 (28%), Positives = 333/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTKSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKD-PAQIVTGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|254428435|ref|ZP_05042142.1| glycyl-tRNA synthetase, beta subunit [Alcanivorax sp. DG881] gi|196194604|gb|EDX89563.1| glycyl-tRNA synthetase, beta subunit [Alcanivorax sp. DG881] Length = 690 Score = 619 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 211/726 (29%), Positives = 347/726 (47%), Gaps = 63/726 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L+E+ +EE+P + + L+ + L E G+ + N+ ++ P RL L ++ L Sbjct: 1 MSRDLLIELGTEELPPKALASLSAALTDEFVRQLDEAGLNHGNVERFAAPRRLALLVRDL 60 Query: 60 SPHSPEKIEERLGPRVG-------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 ++ ER GP V KA GF S GL D ++D KG+ +A Sbjct: 61 DEKQADRDIERQGPAVQAAFDSDRNPTKAAQGFAASLGLTV--DQLGRQDTGKGERLVAQ 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + + +++ AIQK+P PK MRW ++RP ++ + Sbjct: 119 ITEKGKSAAELVPAFFTQAIQKLPIPKRMRWGKRK-----VQFVRPAHWLVALF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILND 231 +++I +L ++ G +YGHRFHAP I + + Y + + ++ VL D + R+ I Sbjct: 169 DEVIPFELLDLQSGRTSYGHRFHAPGAIDLATAGEYAQRIEQDGHVLADFDRRKAMIEEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 G D DLL E+ LVEW + MGSFD +L +P+E + ++ +QK F Sbjct: 229 TLAAGKKAGGVAQIDPDLLNEVTALVEWPEALMGSFDDDFLRVPQEALISAMEEHQKYFS 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI +SNIQ+ D ++ GN +V+ RL DA F+ D Sbjct: 289 VLDADGKLMPRFITISNIQSKD-PQQVIHGNEKVIRPRLADAAFFYDND----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L Q L +VVF ++GT ++ RI L IA I + Sbjct: 337 ---------CKRTLAQHAEGL--ANVVFQQQLGTVADKCQRIGSLAAVIAGQIGGNADNA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 A LSKADL +E+V EF +QG +G A + + A+ E PR + +P + Sbjct: 386 KLAGELSKADLNSEMVGEFDTMQGIMGFYLAQREGQPDDVAKALYEQYLPRFAGDTLPQS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 K + VSLADK+DTL+ + I +KPSG+KDPYALRRATLG++RII+EN++ + L + ++ Sbjct: 446 KTGMAVSLADKIDTLVGIFGIGQKPSGTKDPYALRRATLGVLRIIIENELALDLRELLDQ 505 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN--DNLLTIVDLIK 575 ++ F R + ++ I +I ++L + L +K Sbjct: 506 AAAQLGERIDANQVEDAFDFIKGRYRAIYQEQGIATPVILSVLAIDEACRKPLDFDRRVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KR+ ILA K + EI L EAE+ L ++ Sbjct: 566 AVAAFQQREEAQALAAANKRVSNILA---KLDSAPPEEIDGALLEDEAEQTLTNMVVAAF 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 E ++ Y + ++L + EP++ FFD V+V +D VR+NRL+LL +++++ L V Sbjct: 623 EQSYELLEAGDYASVLEMLADLREPVDAFFDTVMVMAEDEAVRNNRLALLAFLRDLFLNV 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|71736576|ref|YP_272325.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485592|ref|ZP_05639633.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tabaci ATCC 11528] gi|298484619|ref|ZP_07002723.1| Glycyl-tRNA synthetase beta chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|123734064|sp|Q48QJ1|SYGB_PSE14 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71557129|gb|AAZ36340.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|298160843|gb|EFI01860.1| Glycyl-tRNA synthetase beta chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|331011880|gb|EGH91936.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 684 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 207/725 (28%), Positives = 332/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKD-PAQIVAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|302391468|ref|YP_003827288.1| glycyl-tRNA synthetase beta chain [Acetohalobium arabaticum DSM 5501] gi|302203545|gb|ADL12223.1| glycyl-tRNA synthetase beta chain [Acetohalobium arabaticum DSM 5501] Length = 694 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 219/733 (29%), Positives = 358/733 (48%), Gaps = 72/733 (9%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + LLEI +EEIPA E L + L K+ + ++ Y TP RL L + Sbjct: 1 MSNNKLLLEIGTEEIPAGFMEPTFEQLEELAAELFKQYRIETGSVATYGTPRRLTLVVNE 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 +S + +E GP G KA GF R GL +D G+ A Sbjct: 61 VSSRQDDLTKEVKGPAKNIAFDDEGNPTKAGSGFARGQGLTVDELEI--RDTDNGEYLFA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V + + E++L I+ I + + KSMRW+ ++RP+ IL + Sbjct: 119 VQTEEGKPTEELLPEILTELIHDLDFAKSMRWADKD-----MQFVRPIHWILALY----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++ ++L++ +I T GHRF + I++ S Y L E V++D RR I++ Sbjct: 169 GDEPVELEVADIESDTYTKGHRFLSTGQIEIDSAQDYFDRLNEEYVIVDQNKRREMIIDQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L G E++ D+DLL+E+ LVE+ MGSFD+++L LP E++ +++ +Q+ F Sbjct: 229 ITELGKEAGGEVLIDEDLLKEVNYLVEYPTALMGSFDEEFLDLPREVLITSMREHQRYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V N + D + +GN +V+ ARL D + F++ DQ Sbjct: 289 IEDDNGDLMARFITVRNG-SEDHIDIVREGNEKVLRARLADGMFFYEEDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DV 408 + L+ ++ L +V+F +GT E+V R+ L K A+ +D +V Sbjct: 338 ----------KEDLEDKVDELK--NVIFQEDLGTIYEKVKRLVELSKVFAKKLDLSEKEV 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA LSKADL TE+V EFP+L+G +G+EYA L EN + DAI EH PR + + Sbjct: 386 KDSKRAAYLSKADLITEMVIEFPKLEGVMGREYAKLSGENKAVADAIFEHYLPRYATDVL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P K VS+ADK+D ++ + + P+GS+DPYALRR GI++IIL++ + + L+ Sbjct: 446 PQTKTGQIVSIADKIDNIVGCFGVGLIPTGSQDPYALRRQAQGIVKIILDSDLKLNLAGL 505 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I++ ++ FF RL+ +R +R+D+ A+L + +L Sbjct: 506 IDNVLELLVEAEKLKRSQGEVKTEVLDFFKQRLEHIFEERGVRYDVSNAVLATDITDLND 565 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 V + + EF + K E L + R + S +I+P E+E++LY Sbjct: 566 AVKRAEAVMEFRNEEKFEDLLTAYNRAGNLADKA------TSEDINPDLFTDESEEKLYE 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++E + K Y D L ++ +P++ FF+ V+V DD +V++NRL+LL+ Sbjct: 620 AYQSTQAEVEELLVAKDYSSALDELATLQKPVDKFFNSVMVMADDEKVKNNRLALLKNTV 679 Query: 690 NIILIVINVQKIV 702 I + ++ +IV Sbjct: 680 QIFTKIADLSEIV 692 >gi|300719083|ref|YP_003743886.1| glycyl-tRNA synthetase beta subunit [Erwinia billingiae Eb661] gi|299064919|emb|CAX62039.1| Glycyl-tRNA synthetase beta subunit [Erwinia billingiae Eb661] Length = 689 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 204/723 (28%), Positives = 330/723 (45%), Gaps = 61/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI +EE+P + AE + L G+ + + Y P RL L + LS Sbjct: 4 KTFLVEIGTEELPPKALRNLAESFAAHFTAELDTAGLTHGAVSWYAAPRRLALKVANLSA 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E+ GP + G KA +G+ R G+ ++ KG+ L + Sbjct: 64 AQPDREVEKRGPAIAAAFDANGVATKAAEGWARGCGITVDQAERL--STDKGEWLLYRAQ 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L +V ++ K+P PK MRW + ++RP+ ++ +L ++ Sbjct: 122 VTGESAQSLLPAMVSTSLAKLPIPKLMRWGDSD-----VQFVRPVHTVTLLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAH 233 + + + G GHRF + + D Y + LE V D E R+ I DA Sbjct: 172 SLPATILGVASGRTIRGHRFMGEPEFTIDNADQYPQILLERGKVQADYEVRKAQIKADAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAAREIGGVADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V+NI + D I+ GN +VV RL DA F+ D+ Sbjct: 292 DTAGKLLPNFIFVTNIVSKD-PQQIISGNEKVVRPRLADAEFFFNSDR------------ 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV R Sbjct: 339 --------KKRLEDNLPRLET--VLFQKELGTLRDKTDRIQALAGWIAGQIGADVNHATR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 449 ACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAV 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +I F R + + + D I+A+L +K ++ Sbjct: 509 RLYGSKLSNGKVVDEVIDFMLGRFRTWYQEEGHSVDTIQAVLARRPTRPADFNARMKAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA K ++ +S L E +L +S + + Sbjct: 569 HFRTLEEAATLAAANKRVSNILA---KATEPLNDSVSASLLKENEEIQLATYVSALTSKL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q RY L + ++ FF++V+VN ++REVR NRL+LL ++ + L V ++ Sbjct: 626 QPYFAEGRYQDALIELAQLRTAVDNFFEKVMVNAEEREVRINRLTLLAKLRELFLQVADI 685 Query: 699 QKI 701 + Sbjct: 686 SLL 688 >gi|238787798|ref|ZP_04631595.1| Glycyl-tRNA synthetase beta subunit [Yersinia frederiksenii ATCC 33641] gi|238724141|gb|EEQ15784.1| Glycyl-tRNA synthetase beta subunit [Yersinia frederiksenii ATCC 33641] Length = 689 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 203/722 (28%), Positives = 328/722 (45%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDNANLPHGEVIWYAAPRRLALKVINLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVEQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQLLLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + D Y + LE V+ D E R++ I DA Sbjct: 173 IPGTVLGIDSDRVIRGHRFMGEAEFTLDHADQYPQVLLERGKVIADYELRKSIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 TAGNLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 339 -------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGAKLTNAKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E I+ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYQEALVELAALRETIDEFFESVMVMAEDDAVRINRLTLLSKLRELFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|237801654|ref|ZP_04590115.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024513|gb|EGI04569.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] Length = 684 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 207/725 (28%), Positives = 333/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + AE + L+ G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLAEAFLAGIEKGLQGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ GP G +A GF + G+ Q G Sbjct: 61 LSTQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLNEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTMSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 IEELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKD-PAQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVYDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGFYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVDTVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGTKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GNIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D +VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|304320092|ref|YP_003853735.1| glycyl-tRNA synthetase subunit beta [Parvularcula bermudensis HTCC2503] gi|303298995|gb|ADM08594.1| glycyl-tRNA synthetase beta subunit [Parvularcula bermudensis HTCC2503] Length = 688 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 267/717 (37%), Positives = 388/717 (54%), Gaps = 47/717 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPAR+Q + A DL ++ LL E + + + T RL L + GL Sbjct: 1 MSDLLLELFSEEIPARLQQRGAADLQRLVTDLLSAEALAFDEAVAFATARRLTLRVTGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EER GPRVGA KAI+GF+++ GL +I + +K+D KG Y+AV+ + R Sbjct: 61 DAQADRREERKGPRVGAPDKAIEGFMKAAGLASIDEAIVKED-GKGAFYVAVIDQRGRRT 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D+L +P ++ PWPKSMRW + + W+RPL SILC E ++ L Sbjct: 120 ADLLAERLPQLLKTFPWPKSMRWGESE---NELRWVRPLHSILCTFGGE-----VVPFTL 171 Query: 181 KE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + I G T GHRF AP + + + Y L V+LD R I +A LA Sbjct: 172 ENGERPITSGACTAGHRFEAPETFEATTFEDYCETLLARKVILDGARREEKIWAEATALA 231 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TR 295 SA GLE++ D LL E+ GL EW MG FD+K+L +P+E + ++ +QK F R + Sbjct: 232 SAAGLEVIADPGLLAEVSGLAEWPVARMGRFDEKFLAVPDEALIAAMRGHQKYFSVRDPK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G LA FI V+NI +DGG A+++G RV+AARL DA + +D Sbjct: 292 TGRLAPHFICVANIDPADGGQAMMEGYERVLAARLSDAWFLYHQD--------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L PL Q RL DV + +GT E+V R L +++A + A A A Sbjct: 337 -----LKTPLAQHAERLK--DVTYFDGLGTTWEKVGRTADLAERLALALGAAPAAARGAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQN---ENISCCDAIEEHLKPRGPLENVPTNK 472 +L KADL TE+V EFPELQG + + Y + + + + +A+ +H KP G + VPT Sbjct: 390 LLCKADLPTEMVGEFPELQGIMARYYYLAETGTAADPAIAEALRDHYKPAGQGDLVPTAP 449 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------ 526 +S+TV+LADKL TL FW+I EKP+GSKDP+ALRR LG+I+++LEN + L Sbjct: 450 LSVTVALADKLTTLAMFWSIGEKPTGSKDPFALRRMALGVIQLVLENGARLSLRDSVAPL 509 Query: 527 -QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 +L+ FFHDRL++YL ++ R+D IEA+L P++D+L IV + ++ F ++ + Sbjct: 510 LDTKAQADLLGFFHDRLRVYLKEKGHRYDHIEAVLTPDSDDLGLIVTRLHAIDRFLATPE 569 Query: 586 GEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 G + + KR IL EEKK EI L E+ LY + + ++ Sbjct: 570 GGDLVAAYKRAANILKAEEKKEGGPFGGEIDTAQLEAAEEQALYTALEGVEAALAAALPK 629 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ EP++ FF +V VNV+ E+R NRLSLL + V + K+ Sbjct: 630 DDITAALAALSSLREPLDRFFTEVTVNVEAPELRKNRLSLLHRLALAFGDVADFAKL 686 >gi|284008981|emb|CBA75885.1| glycyl-tRNA synthetase beta subunit [Arsenophonus nasoniae] Length = 688 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 200/722 (27%), Positives = 343/722 (47%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + Y +P RL L + L+ + Sbjct: 4 TFLVEIGTEELPPKALRLLAESFAANFKHQLTQAELPHGEVLWYASPRRLALKVTDLAAY 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ Sbjct: 64 QADREVEKRGPAISQAFDASGKPTKAAEGWARGCGISVEQVERLVTD--KGEWLFYRATN 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ ++P PK MRW + ++RP+ +++ +L +++ Sbjct: 122 EGQAAQVLLGDMVVNALSQLPIPKLMRWGDKET-----QFVRPVHTVIMLL-----GDQL 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 ++ ++ + G + GHRF + + S + Y L V+ D E R+ I + A++ Sbjct: 172 LEGEVLGVQSGRMIRGHRFMGEAELTIDSAEQYPAILRERGKVIADYEERKALIKHQANK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A +G LLEE+ LVEW V F++K+L +P E + T+K++QK F Sbjct: 232 VAQQLGGTAELSDSLLEEVTSLVEWPVVLNAKFEQKFLSVPAEALVHTMKSDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++S+ IV GN +V+ RL DA F+K D Sbjct: 292 KVGNLMANFIFVANIESSE-PQQIVAGNEKVIRPRLADAEFFFKTD-------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L++ + RL+ V+F ++ + ++ R+ VL IA I ADV RA Sbjct: 337 ------CKKRLEEHLPRLET--VLFQKQLDSLRDKTDRLEVLAGWIAAKIGADVNHATRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E AI+E +PR + +PTN ++ Sbjct: 389 GLLSKCDLMTNMVFEFTDTQGVMGMHYARRDGEAEEVALAIKEQYQPRFAGDQLPTNPVA 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 + ++LADK+DTL+ + I + P G KDP+ALRRA LG++RII+E D+ L + Sbjct: 449 VALALADKMDTLVGIFGIGQPPKGDKDPFALRRAALGVLRIIVEKGYDLDLLALTQQTAQ 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + ++ R D I+A+L +K + Sbjct: 509 LYGDKLTNKNVIDDVVEFMLGRFRAWYQEQGYRIDTIQAVLARRPTKPADFDARVKAVTH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E KR+ IL K + +++ ++ L E L A + + Sbjct: 569 FRTLEAAEALAAVNKRVANILT---KSDEKLNDNVAASVLKAPEEVTLAAHLVVLQDKLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y L S+ E I+ FFD V+V D++VR NRL+LL ++++ L V ++ Sbjct: 626 PLFADGKYQGALIELASLREVIDAFFDNVMVMDTDQKVRINRLTLLSQLRDLFLQVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|66043282|ref|YP_233123.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae B728a] gi|75504069|sp|Q500T7|SYGB_PSEU2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|63253989|gb|AAY35085.1| Glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. syringae B728a] gi|330970335|gb|EGH70401.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aceris str. M302273PT] Length = 684 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 206/725 (28%), Positives = 332/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKD-PAQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVAQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 IQ ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AIQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|289626617|ref|ZP_06459571.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 684 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 206/725 (28%), Positives = 332/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKD-PAQIVAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DR++ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRMRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|90413726|ref|ZP_01221714.1| glycyl-tRNA synthetase beta subunit [Photobacterium profundum 3TCK] gi|90325195|gb|EAS41692.1| glycyl-tRNA synthetase beta subunit [Photobacterium profundum 3TCK] Length = 689 Score = 618 bits (1594), Expect = e-174, Method: Composition-based stats. Identities = 212/722 (29%), Positives = 340/722 (47%), Gaps = 62/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE S LK +++Q + + TP RL L + L+ Sbjct: 5 NFLIELGTEELPPKALRTLAEAFSSNFEAELKAAALVHQGIEWFATPRRLALKVTALATG 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G KA G+ R G+ +K +KG+ L Sbjct: 65 QADSVVEKRGPAISAAFDAEGNPTKAAQGWARGNGITVEQADTLK--TEKGEWLLYKQEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L + A+ K+P PK MRW +IRP+K++ +L +++ Sbjct: 123 KGKPAQELLSGLAAAALAKLPIPKPMRWGNNE-----IQFIRPVKTLTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I+ ++ I GHRF + + D Y LE V+ + E R+ IL A + Sbjct: 173 IEGNILGADSARIIRGHRFMGEAEFTIDNADQYPAILEERGKVMANYEARKAIILEGAKK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A VG + +L+EE+ LVEW V SF++ +L +P E + T+K +QK F Sbjct: 233 AALEVGGIADLEDELVEEVTSLVEWPVVLTASFEENFLNVPSEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V+NI++ D I++GN +VV RL DA F+K D+ Sbjct: 293 AEGNLIPKFIFVTNIESKD-PRQIIEGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV RA Sbjct: 339 -------KRPLVDRLPELETA--IFQKQLGTIKDKTDRITELAGYIAEKIDADVTNAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ +S Sbjct: 390 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEDVALALYEQYMPRFAGDELPSTGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++ADK+DTL+ + I + P GS DP+ALRRA LG++RII+E ++ L I Sbjct: 450 AAVAMADKIDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKGYNLDLVDLIAKARA 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++I F R + + D D+I A+L +K ++ Sbjct: 509 QFGDKLTNTNVEDDVIDFMLGRFRAWYQDEGHSVDVILAVLALRPTQPADFDKRVKAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S E + KR+ ILA K + E+ L + L+ AEK L + + Sbjct: 569 FRSLDAAESLAAANKRVGNILA---KFDGELPLAVDSSLLIENAEKALAEKVEAMIAALA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y Q L ++ EP++ FFD V+V DD +++ NRL++L ++N L V ++ Sbjct: 626 PVFAEGNYQQALSELATLREPVDAFFDNVMVMADDEKLKVNRLTMLNLLRNEFLKVADIS 685 Query: 700 KI 701 + Sbjct: 686 LV 687 >gi|330961519|gb|EGH61779.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. maculicola str. ES4326] Length = 684 Score = 618 bits (1594), Expect = e-174, Method: Composition-based stats. Identities = 207/725 (28%), Positives = 332/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L+ G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLQGAGLTYSAKQVYAAPRRLAVLITE 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ GP G +A GF + G+ Q G Sbjct: 61 LSTQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTLSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAAYVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VEELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKD-PAQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + ++ + + L ++ Sbjct: 502 AVTQFGTKIKPAGLAEQVLDFIFDRLRARYEDEGVDVATYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GNIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 IQ ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AIQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|54307292|ref|YP_128312.1| glycyl-tRNA synthetase subunit beta [Photobacterium profundum SS9] gi|81828898|sp|Q6LW15|SYGB_PHOPR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|46911712|emb|CAG18510.1| Putative glycyl-tRNA synthetase, beta chain [Photobacterium profundum SS9] Length = 689 Score = 618 bits (1594), Expect = e-174, Method: Composition-based stats. Identities = 212/722 (29%), Positives = 338/722 (46%), Gaps = 62/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE S LK +++Q + + TP RL L + L+ Sbjct: 5 NFLIELGTEELPPKALRTLAEAFSSNFEAELKTAALVHQGIEWFATPRRLALKVTALATG 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G KA G+ R G+ +K +KG+ L Sbjct: 65 QADSVVEKRGPAISAAFDAEGNPTKAAQGWARGNGITVEQADTLK--TEKGEWLLYKQEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L + A+ K+P PK MRW +IRP+K++ +L +++ Sbjct: 123 KGKPAQELLSGLAAAALAKLPIPKPMRWGNNE-----IQFIRPVKTLTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I+ ++ I GHRF + + D Y LE V+ + E R+ IL A + Sbjct: 173 IEGNILGADSARIIRGHRFMGEAEFTIDNADQYPAILEERGKVMANYEARKAIILEGAKK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A VG + +L+EE+ LVEW V SF++ +L +P E + T+K +QK F Sbjct: 233 AALEVGGIADLEDELVEEVTSLVEWPVVLTASFEENFLNVPTEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V+NI++ D I++GN +VV RL DA F+K D+ Sbjct: 293 AEGNLIPKFIFVTNIESKD-PRQIIEGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV RA Sbjct: 339 -------KRPLVDRLPELEKA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVTNAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ +S Sbjct: 390 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEDVALALYEQYMPRFAGDKLPSTGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++ADK+DTL+ + I + P GS DP+ALRRA LG++RII+E + L I Sbjct: 450 AAVAMADKIDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKDYSLDLVDLIAKARA 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D+I A+L +K ++ Sbjct: 509 QFGDKLTNANVEDEVIDFMLGRFRAWYQDEGHSVDVILAVLALRPTQPADFDKRVKAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S E + KR+ ILA K + E+ L + LL +AEK L + + Sbjct: 569 FRSLDAAESLAAANKRVGNILA---KFDGELPLAVDSSLLLEDAEKALAEKVEAMIATLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y Q L ++ EP++ FFD V+V DD +++ NRL++L ++N L V ++ Sbjct: 626 PVFAEGNYQQALSELATLREPVDAFFDNVMVMADDEKLKVNRLTMLNLLRNEFLKVADIS 685 Query: 700 KI 701 + Sbjct: 686 LV 687 >gi|238750267|ref|ZP_04611769.1| Glycyl-tRNA synthetase beta subunit [Yersinia rohdei ATCC 43380] gi|238711500|gb|EEQ03716.1| Glycyl-tRNA synthetase beta subunit [Yersinia rohdei ATCC 43380] Length = 689 Score = 618 bits (1593), Expect = e-174, Method: Composition-based stats. Identities = 202/722 (27%), Positives = 328/722 (45%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL + + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDNANLPHGEVIWYAAPRRLAVKVLNLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDEAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQLLLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + + D Y + L V+ D E R+ I DA Sbjct: 173 IPGTVLGIDSDRVIRGHRFMGEAEFTLDNADQYPQVLMERGKVIADYELRKAIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D Sbjct: 293 TAGNLLPNFIFVTNIESKD-PQQIISGNEKVVRPRLADAEFFFNTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 338 ------LKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNAKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K +++ + L AE +L + ++ Sbjct: 570 FRTLDAAATLAAANKRVSNILA---KSTDKLNDHVHASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYQEALVELAALRETVDEFFDSVMVMAEDDAVRVNRLTLLSKLRELFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|330985731|gb|EGH83834.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. lachrymans str. M301315] Length = 684 Score = 618 bits (1593), Expect = e-174, Method: Composition-based stats. Identities = 207/725 (28%), Positives = 332/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTIHGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKD-PAQIVAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DLSLL 683 >gi|289648601|ref|ZP_06479944.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aesculi str. 2250] Length = 684 Score = 618 bits (1593), Expect = e-174, Method: Composition-based stats. Identities = 206/725 (28%), Positives = 332/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDANGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKD-PAQIVAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DR++ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRMRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|71281166|ref|YP_266788.1| glycyl-tRNA synthetase subunit beta [Colwellia psychrerythraea 34H] gi|123761120|sp|Q48AS2|SYGB_COLP3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71146906|gb|AAZ27379.1| glycyl-tRNA synthetase, beta subunit [Colwellia psychrerythraea 34H] Length = 688 Score = 618 bits (1593), Expect = e-174, Method: Composition-based stats. Identities = 200/719 (27%), Positives = 348/719 (48%), Gaps = 60/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 L+E+ +EE+P + A + G L + Y +++ + TP R + + L Sbjct: 5 TLLIELGTEELPPKSLKTLATAFYDNIKGQLDSHNLSYSDIKWFATPRRFAVQVFDLVEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA G+ RS G++ ++ KG+ L Sbjct: 65 QDDKIVEKRGPAVNVAFDDAGNASKAAQGWARSNGIEVDQAERLV--TGKGEWLLHRATV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +++ +V A+ K+P K MRW + +IRP++++ + ++ + Sbjct: 123 SGKAVVELIPDMVTTALNKLPIAKPMRWGAERT-----QFIRPVQTLTMLFGSDIIAGEA 177 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + N GHRFH + + + Y +L +A V +D R+N I+ ++ Sbjct: 178 L-----GVSSSNQVQGHRFHHEGLVTINHANDYQAELAKAYVEVDFNERQNKIVAQIKQV 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + + D++LL E+ LVEW +G+FD+ +L +P E + ++K +QK F + Sbjct: 233 ANDIDAVALIDEELLNEVTALVEWPVTLVGTFDEDFLNVPAEPLIYSMKDHQKYFPVTDK 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N FI V+NI++ D I+ GN +V+ RL DA F+K D+ Sbjct: 293 NGQLVNKFIFVTNIESKD-PNTIIFGNEKVIRPRLADAEFFFKTDK-------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 + L+ R+ L+ V+F ++GT + RI L + IA+ ++ + RA Sbjct: 338 ------KQSLESRLKSLE--SVLFQKQLGTLKAKSERIASLSQFIAEQLNENAQDAYRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL +++V EFP++QG +GK YA+ EN + A+E+ +PR +++P I Sbjct: 390 LLSKTDLMSDMVLEFPQVQGTMGKYYALHDGENENIAQALEDQYRPRFAGDSLPEANIGC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V+++DK+D+L+ + IN+ P G KDP+ALRRA +G IRII+E ++D+ LS I Sbjct: 450 AVAISDKIDSLVGIFGINQAPKGDKDPFALRRAAIGSIRIIIEKQLDLDLSTLINKSIEL 509 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +++ F R + + ++ I D+I+A+L + L IK + F Sbjct: 510 FGDKLVNENTATDVLEFIMGRFRAFYQEQGISVDVIQAVLAKKPSAPLDFEKRIKAVTFF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + E+ + +AE+ L + D + Sbjct: 570 GELPEAATLAAANKRVGNILA---KFDGELYQSFNTDLATEQAERDLADIYRDISLKVAP 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 M K Y L + PI+ FFD V+V DD V+ NRL+LL I+N + ++ Sbjct: 627 LMADKNYQAALSELAQLKAPIDTFFDGVMVMSDDEAVKINRLTLLNQIRNSFFAIADIS 685 >gi|300115242|ref|YP_003761817.1| glycyl-tRNA synthetase subunit beta [Nitrosococcus watsonii C-113] gi|299541179|gb|ADJ29496.1| glycyl-tRNA synthetase, beta subunit [Nitrosococcus watsonii C-113] Length = 691 Score = 618 bits (1593), Expect = e-174, Method: Composition-based stats. Identities = 222/722 (30%), Positives = 348/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+P + K +E L L L+ G+IY +++ Y P RL ++++ L+ Sbjct: 6 DLLIEIGTEELPPKALRKLSESLLQELGRGLQAAGLIYADLKGYGAPRRLAVWVQALTVS 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 PE++ ER GP + G A GF S G+ + +K + KG + R+ Sbjct: 66 QPEQVLERRGPALAAAVNEEGKPTAAARGFAGSCGVPVEALESLKNE--KGAWLVYRQRR 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L TI+ + +P PK MRWS +IRP+ ++ + E++ Sbjct: 124 QGAPTRELLPTILAQVLHGLPIPKPMRWSDL-----PGEFIRPVHWLVLLF-----GEEV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I L + G T+GHRFH P + + Y LE E VL D RR AI Sbjct: 174 IPATLLGVQAGRETWGHRFHHPESLYLTEPAVYASLLETEGKVLADFTARREAIYAQVVA 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + + ++ LL+E+ GLVEW G FD+ +L LPEE++ T++ +QK F + Sbjct: 234 AAQQMGGKALIEEALLDEVTGLVEWPMALAGRFDEDFLKLPEEVLIATMQDHQKYFPVQD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L CFI V NI++ A+V+GN RV+ RL DA F+ D+ Sbjct: 294 EQGHLLPCFITVCNIES-QCPEAVVEGNERVIRPRLTDAAFFYTTDR------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L R RL + F K+GT ER R+ L IA+ I + RA Sbjct: 340 -------KESLVSRRERLK--KITFQEKLGTVFERTERLAKLAGHIAKDIGGNGDWARRA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL TE+V EFPELQG +G+ YA+ E +A+ E PR + +P Sbjct: 391 GLLSKCDLVTEMVTEFPELQGSMGRYYALHDKEPQEVAEALREQYLPRFAGDVLPCTAPG 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 +SLAD+LDTL+ + PSG KDPY LRRA LG++RII+E+++ + L Sbjct: 451 QALSLADRLDTLVGLFGTGTPPSGDKDPYGLRRAALGVLRIIIESELALDLPSLLKLACE 510 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ + +RL+ Y + R D IEA+L D L +K + Sbjct: 511 TYHDRLTENNTAAHVYAYLLERLRGYYLEAGFRPDEIEAVLAVRPDQPLDFDRRLKAVAS 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KRI IL K + +I L AE+ L A + + Sbjct: 571 FRKLPEAESLSAANKRIRNILR---KSGERLPAQIESDLLQDSAEQTLAAQMYGLEREVV 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + L + ++ FFD+V+V V+D ++R NRL+LL+ ++ + L V ++ Sbjct: 628 PLLERQDHRATLTALAGLRSAVDQFFDEVMVMVEDPKLRANRLALLERLQTLFLQVADIS 687 Query: 700 KI 701 ++ Sbjct: 688 RL 689 >gi|330890240|gb|EGH22901.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. mori str. 301020] Length = 684 Score = 617 bits (1592), Expect = e-174, Method: Composition-based stats. Identities = 208/725 (28%), Positives = 333/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+IY + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLIYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKD-PAQIVAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|312882229|ref|ZP_07741975.1| glycyl-tRNA synthetase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] gi|309370073|gb|EFP97579.1| glycyl-tRNA synthetase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] Length = 686 Score = 617 bits (1592), Expect = e-174, Method: Composition-based stats. Identities = 210/723 (29%), Positives = 342/723 (47%), Gaps = 64/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FL+E+ +EE+P AE + LKE + +Q ++ + P RL L + L+ Sbjct: 3 KEFLIELGTEELPPTQLRTLAEAFASNFTTELKEAELDHQGIKWFAAPRRLALKVTELAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 63 SQADKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGIAVEQAERMVTD--KGEWLLFKQE 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++ + A+ K+P K MRW + +IRP+K++ +L +E Sbjct: 121 VKGQSTTAIVVELAAKALAKLPIAKPMRWGDKTT-----QFIRPVKTLTILLGSE----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAH 233 +I+ ++ + GHRF ++S + Y LE V+ D E R+ IL DA Sbjct: 171 LIEGEILGVQSSRTLRGHRFMGEQEFTIESAEQYPEILETRGKVMADYEARKALILADAQ 230 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + ASA+G + +L+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 231 KAASAIGGLADLEDELVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 T + L FI VSNI++ D ++GN +VV RL DA F+ D+ Sbjct: 291 TEDKKLLPNFIFVSNIESKDPRQV-IEGNEKVVRPRLADAEFFFNTDR------------ 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 +PL R+ LD +F ++GT ++ RI L IA I ADV +R Sbjct: 338 --------KRPLIDRLPELDSA--IFQKQLGTIKDKTDRITELAGYIANKIGADVEKSER 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P++ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVALALNEQYMPRFAGDTLPSDGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V+LADKLDT++ + I + P GS DP+ALRRA+LG++RII+E D+ L I Sbjct: 448 STAVALADKLDTIVGIFGIGQAPKGS-DPFALRRASLGLLRIIVEYGYDLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + +I F R + + D+ D+I+A+L +K ++ Sbjct: 507 SLFGSRLTNESVEHEVIDFMLGRFRAWYQDQGFSIDVIQAVLARRPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K ++ + L E E+ LY + + Sbjct: 567 HFRTLDAAEPLAAANKRVSNILA---KFEGDLPERVDETLLTEEPEQALYQAL--ATPAV 621 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y Q L + EP++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 622 SIELKNGGYQQQLTQLAELREPVDKFFDNVMVMADDEALKKNRLTLLNQLRNLFLQIADI 681 Query: 699 QKI 701 + Sbjct: 682 SLL 684 >gi|251787694|ref|YP_003002415.1| glycyl-tRNA synthetase subunit beta [Dickeya zeae Ech1591] gi|247536315|gb|ACT04936.1| glycyl-tRNA synthetase, beta subunit [Dickeya zeae Ech1591] Length = 694 Score = 617 bits (1590), Expect = e-174, Method: Composition-based stats. Identities = 209/729 (28%), Positives = 338/729 (46%), Gaps = 68/729 (9%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L G+ YQ++ + P RL L + G Sbjct: 1 MTDKTFLVEIGTEELPPKALRTLAEAFAANFTAELDAAGLGYQSVGWFAAPRRLALKVAG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LSASQPDREVEKRGPAIAQAFDAEGKATKAAEGWARGCGITVEQAERL--TTDKGEWLLF 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAQVKGEAAQTLLPGMVSTALAKLPIPKLMRWGDNDT-----QFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +++I + I + GHRF + + D Y + LE VL D E R+ I Sbjct: 169 GDELISGTVLGIDSARVIRGHRFMGEPEFTIDNADQYPQILLERGKVLADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEDAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKD-PQQIIAGNEKVVRPRLADAEFFFNTDR--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT + RI L +A+ I ADV Sbjct: 339 -----------KKRLEDHLPRLET--VLFQQQLGTLRNKTDRIAALTGWVAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 AKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E ++ + L E Sbjct: 446 SAVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTE 505 Query: 531 D--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + ++I F R + + + D I+A+L Sbjct: 506 EAVRLYGDKLSTINAGNANVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADF 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +K ++ F + + E + KR+ ILA K ++ + L E +L Sbjct: 566 DARVKAVSHFRTLEQAEALAAANKRVSNILA---KSTETLNDSVQAALLKENEEIQLATY 622 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ + + RY + L + E ++ FFD+V+VN D+ +VR NRL+LL ++N Sbjct: 623 VTALTSKLAPWFAEGRYQEALAELAQLRESVDNFFDKVMVNADEAQVRINRLTLLNELRN 682 Query: 691 IILIVINVQ 699 + L V ++ Sbjct: 683 LFLKVADIS 691 >gi|213968433|ref|ZP_03396576.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. tomato T1] gi|301384279|ref|ZP_07232697.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato Max13] gi|302060159|ref|ZP_07251700.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato K40] gi|302130432|ref|ZP_07256422.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926721|gb|EEB60273.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. tomato T1] gi|330876370|gb|EGH10519.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 684 Score = 617 bits (1590), Expect = e-174, Method: Composition-based stats. Identities = 206/725 (28%), Positives = 332/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LAS + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VEELASQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDADGKLLPRFITVANIESKD-PAQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEAEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKVKPAGLAEQVLEFIFDRLRARYEDEGVEVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLARLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|289677558|ref|ZP_06498448.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae FF5] Length = 684 Score = 617 bits (1590), Expect = e-174, Method: Composition-based stats. Identities = 205/725 (28%), Positives = 330/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELAAQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDGTGKLLPRFITVANIESKD-PAQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLIETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLEFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 ATQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|302185849|ref|ZP_07262522.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae 642] Length = 684 Score = 617 bits (1590), Expect = e-174, Method: Composition-based stats. Identities = 206/725 (28%), Positives = 332/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAAYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKD-PAQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAKRS 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPDDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLIETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 IQ ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AIQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|119471663|ref|ZP_01614048.1| glycyl-tRNA synthetase subunit beta [Alteromonadales bacterium TW-7] gi|119445442|gb|EAW26729.1| glycyl-tRNA synthetase subunit beta [Alteromonadales bacterium TW-7] Length = 689 Score = 616 bits (1589), Expect = e-174, Method: Composition-based stats. Identities = 213/719 (29%), Positives = 341/719 (47%), Gaps = 60/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K AE + L L+ + +Q + Y +P RL L +K L Sbjct: 5 NLLVEIGTEELPPKSLRKLAEAFAANLTQELESLELAHQGVSWYASPRRLGLQVKALEAK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP G KA G+ R G++ ++ D KG L + + Sbjct: 65 QQDKEVEKRGPATKAAFDSEGNPTKAAMGWARGCGIEVSEAQTLETD--KGAWLLHIAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++ + A+ K+P PK MRW + +IRP+ ++ + +E + Sbjct: 123 AGQETKTLMADAIAKALSKLPIPKPMRWGANKT-----QFIRPVHTVTILFGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ ++ N GHRFH P I + D L+ A V+ D E R+ I Sbjct: 173 LEGEILGKQVSNQLQGHRFHHPEKISINHADEVFDVLKSAYVIADYEQRKAQIRAQIEEA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ASAV + D+DLLEE+ LVEW +F++ +L +P E + T+K +QK F + Sbjct: 233 ASAVNAVVAMDEDLLEEVTSLVEWPVTLTATFEEAFLDVPAEALIYTMKDDQKYFPLLDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N F+ VSNI++ D + ++ GN +VV RL DA F++ D+ Sbjct: 293 NGKLLNKFLFVSNIESKD-PSVVISGNEKVVRPRLADAQFFFETDK-------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 K L+ R+ LD V+F ++GT ++ RI L IA+ + AD L RA Sbjct: 338 ------KKTLESRLESLDT--VLFQKQLGTLKDKSERISELAGYIAEQLGADKDLAKRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EF ++QG +G YA E A E PR +N+PTN IS Sbjct: 390 LLSKTDLMTEMVMEFTDVQGVMGMHYARFDGEAEDVALAQNEQYMPRFAGDNLPTNLISC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----------- 524 V++ADK DTL+ + I + P G KDP+ALRRA +G +RI++E ++ + Sbjct: 450 AVAIADKFDTLVGIFGIGQAPKGDKDPFALRRAAIGALRIMVEKELPLDILDLVAKAQTL 509 Query: 525 ----LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 L+ ++ F R + + D I D+I+A+L + +K ++ F Sbjct: 510 FGEKLTNLNVSTDVFEFMLGRFRAWYQDEGIEVDVIQAVLARRPTKPVDFDRRVKAVSHF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + E + KR+ ILA K + + L +AEK L + ++ F T + Sbjct: 570 RTLDAAEALAAANKRVSNILA---KNDITSQGNVDESLLSDDAEKVLASQVAKFATELAP 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L I E ++ FFD V+V DD V+ NRL+LL + + L + ++ Sbjct: 627 LYADGNYQEALSQLAGIRESVDNFFDNVMVMADDEAVKQNRLALLSQLSGLFLDIADIS 685 >gi|90408448|ref|ZP_01216608.1| glycyl-tRNA synthetase beta subunit [Psychromonas sp. CNPT3] gi|90310432|gb|EAS38557.1| glycyl-tRNA synthetase beta subunit [Psychromonas sp. CNPT3] Length = 688 Score = 616 bits (1589), Expect = e-174, Method: Composition-based stats. Identities = 215/724 (29%), Positives = 349/724 (48%), Gaps = 63/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L+E+ +EE+P + K AE + + L + + ++ + +P RL + + Sbjct: 1 MSQENLLIELGTEELPPKSLRKLAEAFADNVRARLIDAELSFEKVDWLASPRRLAVVVTQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ +K+ E+ GP V G KA +G+ RS G+ ++ D KG+ L Sbjct: 61 LTDAQADKVVEKRGPAVSVAFAEDGTATKAAEGWARSNGISVEQAQRLVTD--KGEWLLF 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L +IV A+ K+P PK MRW + S+ +IRP+ ++ + Sbjct: 119 KSEVKGKEVAQLLPSIVADALAKLPIPKPMRWGS-----SSIQFIRPVHTLCILF----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +I +L + I GHRF ++ D Y LE V++D R+ I Sbjct: 169 GNTLIPAELLGVKSTRIIRGHRFMGESEFNIEHADDYAELLETRGKVIVDYVRRKAIIRT 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 LASA D+ LLEE+ LVEW +GSF++KYL +P E + T+K NQK F Sbjct: 229 QVEVLASAENGVADIDEALLEEVTALVEWPVTLIGSFEEKYLAVPSEALIYTMKDNQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++G L FI VSNI+++D + +VQGN +VV RL DA F+ D+ Sbjct: 289 PVIDKKGNLLPRFIFVSNIESTD-PSQVVQGNEKVVRPRLADAEFFFATDK--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L R+ L V+F ++GT E+ +RI + +KIA LI+AD Sbjct: 339 -----------KKTLASRVELLS--SVLFQKQLGTLKEKSARIANIAEKIALLINADAKH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL TE+V EFP++QG +G YA E+ + A+ E PR + +PT Sbjct: 386 AQRAGWLSKADLMTEMVLEFPDVQGVMGMYYARFDGEDEAVAIALNEQYLPRFSGDKLPT 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ VSLADKLDTL+ + I + P G+ DP+ALRRA +G++RII + ++D+ + E Sbjct: 446 SLVACAVSLADKLDTLVGIFGIGQAPKGAADPFALRRAAIGLLRIIKDKELDLDIVALAE 505 Query: 531 ---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 ++ F R + +LI+++L + I+ Sbjct: 506 LANVEYGEKLSNKNVVTEVVDFLFARFRATYQANGFSAELIQSVLARRPTKPVDFEKRIQ 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + +F + + + KRI ILA K I+ EI + AE L +S Sbjct: 566 AVAKFHALPEAAPIAAANKRISNILA---KVKTPINAEIDADLFVEPAETALAQKLSTLE 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + Y L S+ P+++FF+ V+V D+ ++ NRL++L ++++ L V Sbjct: 623 LKLSPLFEKGDYESALFELASLQAPVDLFFENVMVMADNDAIKQNRLAILSRLRDLFLKV 682 Query: 696 INVQ 699 +V Sbjct: 683 ADVS 686 >gi|28867425|ref|NP_790044.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato str. DC3000] gi|38258482|sp|Q88B35|SYGB_PSESM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28850659|gb|AAO53739.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. tomato str. DC3000] Length = 684 Score = 616 bits (1588), Expect = e-174, Method: Composition-based stats. Identities = 206/725 (28%), Positives = 332/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAANVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LAS + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VEELASQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDADGKLLPRFITVANIESKD-PAQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEAEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKVKPAGLAEQVLEFIFDRLRARYEDEGVEVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLARLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|92118676|ref|YP_578405.1| glycyl-tRNA synthetase subunit beta [Nitrobacter hamburgensis X14] gi|91801570|gb|ABE63945.1| glycyl-tRNA synthetase beta chain [Nitrobacter hamburgensis X14] Length = 764 Score = 616 bits (1588), Expect = e-174, Method: Composition-based stats. Identities = 301/784 (38%), Positives = 422/784 (53%), Gaps = 105/784 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL+++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 VRQPDLKDERKGPKVGAPDAAVQGFLKATGLKSLDEAKIQRDPKKGDFYVALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL +PV ++ PWPK MRW + A +W+RPL SI+ E + ++ D+ Sbjct: 121 IDVLAEFLPVIVRTFPWPKQMRWGERSAKPGALTWVRPLHSIIATFGPETEEPDVVRFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP+ V+ + Y L EA V+LDP+ R++ IL DA LA A G Sbjct: 181 SGIAAGQTTRGHRFMAPNEFSVRRFEDYEAKLHEAKVVLDPQRRKDIILADAKELAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG--- 297 LVED+ LL+E+ GLVEW V MGSFD+++L +P E+IR TI+ NQKCFV R Sbjct: 241 FGLVEDQVLLDEVAGLVEWPVVLMGSFDEEFLSIPGEVIRATIRNNQKCFVVRQPHHPLE 300 Query: 298 ----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 LAN FIL +NI+ASDGG AIV GN RV+ ARL DA F++ D Sbjct: 301 GGGERLANRFILTANIEASDGGKAIVAGNERVIRARLSDAKFFYETD------------- 347 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-----DADV 408 L L+ R+ + + +VFH K+GTQ ER++RI L +IA L+ A+ Sbjct: 348 -------LKTKLEYRLPKFE--KIVFHEKLGTQAERIARIERLAAEIAPLVVPTAQGAEK 398 Query: 409 A----LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 RA L KADL TE+V EFPELQG +GK YA+ Q+E+ S A EEH KP+GP Sbjct: 399 EKLVAKAKRAAQLCKADLLTEVVGEFPELQGLMGKYYALAQDEDASVAAACEEHYKPQGP 458 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII----------- 513 + VPT+ +SI V+LADK+DTL+ FW I+EKP+GSKDPYALRRA LG I Sbjct: 459 NDRVPTDPVSIAVALADKIDTLVGFWVIDEKPTGSKDPYALRRAALGAIRLLLENNLRLS 518 Query: 514 ------RIILENKIDIPLSQFIED-----------------QNLILFFHDRLKLYLHD-- 548 I E ++ + L+ + + F +L+ D Sbjct: 519 FRRLVGCAIPEIQVKVKLAPLTRSAIAAQEALYKADFDSSAKAVYREFRRKLRQDASDEV 578 Query: 549 -----------------------------RDIRHDLIEAILRP-ENDNLLTIVDLIKHLN 578 + RHDL++A+ D+LL IV ++ L Sbjct: 579 DAAYEAQYEQASSDLLSFFADRLKVQLREQGARHDLVDAVFALEGQDDLLMIVRRVEALG 638 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F + G+ L KR ILAIEEK+++ L+ EK L A I Sbjct: 639 KFLDTDDGKNLLAGTKRASNILAIEEKRDKRTFDGAPDASLYRLDEEKTLAAAIDQVTAE 698 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 ++ ++ + + + ++ FFD+V VN DD +R+NRL LL I+ V + Sbjct: 699 ASAAVANEDFAAAMAAMAKLRPAVDAFFDKVKVNDDDPTIRENRLKLLNEIRAATRTVAD 758 Query: 698 VQKI 701 KI Sbjct: 759 FSKI 762 >gi|330952323|gb|EGH52583.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae Cit 7] Length = 684 Score = 616 bits (1588), Expect = e-174, Method: Composition-based stats. Identities = 205/725 (28%), Positives = 332/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + + G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGITGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISQR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKD-PAQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLIETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 IQ ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AIQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|288942696|ref|YP_003444936.1| glycyl-tRNA synthetase subunit beta [Allochromatium vinosum DSM 180] gi|288898068|gb|ADC63904.1| glycyl-tRNA synthetase, beta subunit [Allochromatium vinosum DSM 180] Length = 691 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 214/726 (29%), Positives = 346/726 (47%), Gaps = 61/726 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D L+EI +EE+P + + + LK G+ ++ + + P RL L +KG Sbjct: 1 MSTTDLLIEIGTEELPPIALPVLSRAFTEGVRDQLKTHGIGFETVESFAAPRRLALLVKG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + P++ R GP V G KA+ GF RS G++ + +++ KG + Sbjct: 61 IQTRQPDQENVRRGPAVQAAFDAEGQPTKALLGFARSCGVEVEALG--REETDKGSWLVH 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P R ++ + A+ +P PK MRW ++RP+ + +L E Sbjct: 119 RSITPGRETAQLVPDMTEAALAGLPIPKRMRWGDRSE-----EFVRPVHWVCLLLGTE-- 171 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 I + +P T GHRFH P PI + Y L E V E RR I Sbjct: 172 ---SIAGTVMGLPTETRTRGHRFHHPAPIAIGQASDYAATLREQGRVEPSFELRRERIRE 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 LA++ L D +LL+E+ LVEW Q + FD+++L +P E++ T+++NQK F Sbjct: 229 QVMSLAASNRLRARIDPELLDEVTALVEWPQALLCKFDERFLEIPPEVLIETMQSNQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D + GN RV+ R DA FW +D Sbjct: 289 PVEDMNGALQARFIAVANIESHD-PDQVRAGNERVIRPRFSDAAFFWSQD---------- 337 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 L +PL+ RL+ VVF K+GTQ + +R+ LG+++AQ I D AL Sbjct: 338 ----------LKQPLEAFAPRLET--VVFQDKLGTQAAKCARVARLGRELAQAIGVDPAL 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V+RA LSK DL T +V EFP LQG +G+ YA E+ A+E+ +PR + +PT Sbjct: 386 VERAAALSKCDLMTAMVFEFPGLQGTMGRYYAERSGEDACVSAAMEDQYRPRFAGDELPT 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE------------ 518 + ++LAD+LDTL+ + I +P+G+KDPYALRRA++ ++R+++E Sbjct: 446 SPCGRALALADRLDTLVGIFGIGLRPTGTKDPYALRRASIAVLRLLIETPLDLDLRDLLE 505 Query: 519 ---NKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L + ++ + +RL+ Y DR + D +E+++ N + I Sbjct: 506 RAAAGFPAGLLAEDTVEAVLGYMLERLRGYYSDRVVAVDTVESVIHTGVTNPWDLDRRIV 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + +F + + KRI IL + + +P L+ E+RL I++ Sbjct: 566 AVTQFRRLPAADALAAANKRIRNILLKADPADL-TEGGPNPALLVEVPEQRLAERIAELE 624 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 T ++ + Y I + L + E ++ FFD+V+V DD R NRL LL+ + + L V Sbjct: 625 TRVEPLARARDYVAILETLAELREDVDAFFDEVMVMADDPATRRNRLQLLRSLSALFLRV 684 Query: 696 INVQKI 701 ++ ++ Sbjct: 685 ADISRL 690 >gi|331017695|gb|EGH97751.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 684 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 206/725 (28%), Positives = 332/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAANVLADFNERRQIISRR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LAS + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VEELASHQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDADGKLLPRFITVANIESKD-PAQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEAEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKVKPAGLAEQVLEFIFDRLRARYEDEGVEVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLARLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|94502179|ref|ZP_01308676.1| Glycyl-tRNA synthetase, beta subunit [Oceanobacter sp. RED65] gi|94425682|gb|EAT10693.1| Glycyl-tRNA synthetase, beta subunit [Oceanobacter sp. RED65] Length = 689 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 212/726 (29%), Positives = 338/726 (46%), Gaps = 62/726 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+EI +EE+P + + L+ +G+ + N + P RL + L G Sbjct: 1 MSQHDFLVEIGTEELPPTALKSLRDAFQKGIETFLQAKGLSFANSEAFAAPRRLAVRLTG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS E+ GP V G KA +GF RS G+ +I +KG+ Sbjct: 61 LSAQGESSKSEKFGPYVNVAIGDDGKPTKAAEGFARSNGVNFEELDRI--TDEKGERLYF 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P D L + ++ K+P PK MRW + + ++RP+ +L +L Sbjct: 119 ATEVPGAKAVDELPNAIRDSLNKLPIPKRMRWGASRT-----EFVRPVHWVLTLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 K I+ D+ + T GHRFHA I + S Y L+E VL + + R+ I Sbjct: 169 DNKSIEADILGVKTNYFTRGHRFHANKEITITSPSAYEATLKEQGKVLANYDERKEMIRQ 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A +G + V D+DLL+E+ L EW G+FDK++L +P E + ++K +QK F Sbjct: 229 QVLAEAEKLGGQAVIDEDLLDEVASLNEWPTALSGNFDKEFLQVPAEALVSSMKEHQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++G L FI + NI++ D +++GN RV+ RL DA FW D Sbjct: 289 HVLDKDGKLMPNFITICNIESKD-PQQVIEGNERVIRPRLADAKFFWDTD---------- 337 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 L PLD R +LD V + ++G+ ++ R+ VL KIA I D Sbjct: 338 ----------LKTPLDSRFEKLD--SVRWVQQLGSLKDKSERLMVLASKIATAIGGDAEK 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +RA L K DL +E+V EF +LQG G+ YA E+ C A+EE P + +P Sbjct: 386 AERAAKLCKTDLLSEMVLEFSDLQGLAGRYYAQHDGEDPDVCAAMEEQYMPAFAGDALPQ 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + ++LAD+LD+L+ + I + P+G KDP+ALRRA+LG++R+I+EN + + L++ I+ Sbjct: 446 TQTGLALALADRLDSLVGLFGIGQIPTGGKDPFALRRASLGVLRLIVENNLKLDLNELID 505 Query: 531 ---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 LI + DR + D +I + +A+ I + Sbjct: 506 WAMDNNWPCDLDADNKSKLIDYMLDRFSAWYQDENIPSVVFQAVRAKGITQPYDINQRVM 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F E + KR+ IL+ + + ++ L AEK L + Sbjct: 566 AVHAFSQLESAEALAAANKRVSNILSKNDAFMD--NAKVDNNLLSDAAEKALAESLDKQM 623 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + Y Q L + + I+ FFD+V+V DD V+ NRLSLL ++N+ L V Sbjct: 624 QSATPLFEKGEYAQYLTQLTELRQSIDTFFDEVMVMADDEAVKQNRLSLLNQLRNLFLNV 683 Query: 696 INVQKI 701 ++ + Sbjct: 684 ADISLL 689 >gi|209696359|ref|YP_002264290.1| glycyl-tRNA synthetase subunit beta [Aliivibrio salmonicida LFI1238] gi|238064847|sp|B6EGT3|SYGB_ALISL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|208010313|emb|CAQ80649.1| glycine-tRNA synthetase, beta subunit [Aliivibrio salmonicida LFI1238] Length = 688 Score = 615 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 212/725 (29%), Positives = 347/725 (47%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + LK G+ +Q ++ Y TP RL L + L Sbjct: 1 MAKNFLIELGTEELPPKALRSLAEAFAANFEAGLKAAGLAHQGIKWYATPRRLALKIAEL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 +KI E+ GP + G KA G+ R G+ ++K D KG+ L Sbjct: 61 DEGQADKIVEKRGPAIASAFDADGNPTKAAQGWARGNGITVEQAERLKTD--KGEWLLHK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++ ++ + A+ +P PK+MRW + +IRP+K++ +L Sbjct: 119 EEVKGQPVKGLVVELAAKALAGLPIPKAMRWGNSD-----IQFIRPVKTLTILL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +++I+ + + GHRF + S D Y LE V+ D + R+ IL Sbjct: 169 DELIEGTILGVASTRTIRGHRFMGESEFTIDSADQYPAILEERGKVMADYDARKAIILAG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A AVG + +L+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AKKAAEAVGGIADLEDELVEEVTSLVEWPVVLTAKFEQEFLNVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +E L FI V+NI++ + I++GN +VV RL DA F+ D+ Sbjct: 289 VYDQEKNLLPNFIFVTNIESKE-PRHIIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ Sbjct: 386 QRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDAQVALALYEQYMPRFAGDDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S +V++ADKLDTL+ + I + P GS DP+ALRRA LGI+RII+E ++ L + Sbjct: 446 DVSASVAMADKLDTLVGIFGIGQAPKGS-DPFALRRAALGILRIIVEKGYNLDLVDLVAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 D ++I F R + + D D+I+A+L +K Sbjct: 505 AQSLFGDKLTNANVDTDVIDFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRELDAAESLAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKVLAEKVEILAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPVFIAGNYQEALSRLAELREPVDAFFDGVMVMADDEALKLNRLTLLNKLRNLFLDIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|170724382|ref|YP_001758408.1| glycyl-tRNA synthetase subunit beta [Shewanella woodyi ATCC 51908] gi|238688635|sp|B1KCY4|SYGB_SHEWM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169809729|gb|ACA84313.1| glycyl-tRNA synthetase, beta subunit [Shewanella woodyi ATCC 51908] Length = 689 Score = 615 bits (1585), Expect = e-173, Method: Composition-based stats. Identities = 217/722 (30%), Positives = 354/722 (49%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L++ + +++ + + P RL + L Sbjct: 5 NLLIEVGTEELPPKALRKLAESFVSNFTDELEKAELSFESAQWHAAPRRLAFTVNQLVLA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ ++K D KG+ L + Sbjct: 65 QADKVVEKRGPAIAQAFDADGNPTKAAMGWARGNGISVEQAERLKTD--KGEWLLHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW T+ + +IRP+ ++ +L +E + Sbjct: 123 VGVETKSLINDMAQRALDKLPIPKPMRWGTSKT-----QFIRPVHTVTMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 ++ +L + + GHRF ++ D+Y+ L+E VL D E R+ I DA Sbjct: 173 VEGELLGVKSARVIRGHRFMGKKSFELDHADNYLSALKEQGMVLADYEARKAIIKTDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGVADLEDDLLEEVTSLVEWPVVLTANFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++ D I+ GN +VV RL DA F++ D+ Sbjct: 293 KAGQLLPHFIFVTNIESKD-PQVIISGNEKVVRPRLADAEFFFETDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ R+A L+ VVF ++GT +RV RI L IA IDAD RA Sbjct: 339 -------KQTLESRLASLET--VVFQKQLGTIKQRVERISQLAGYIAASIDADSDEASRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A+ E KP+ + VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVAVALAEQYKPKFSGDTVPTAPIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 + V+LA+KLDTL+ + I + P G+ DP+ALRRA +G++RI LEN + + L I Sbjct: 450 VCVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRICLENNLPLDLVDLIAKAQE 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ FF R + + D+ + D+I A+L IK + Sbjct: 510 LHGDNLTNDKAAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARRPTAPADFDSRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + + KR+ ILA K E++ +IS + L+ AEK L +++ + Sbjct: 570 FRSLEQASALAAANKRVSNILA---KVEGELATDISSELLVENAEKALAEKLNELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L ++ Sbjct: 627 PLFAAANYQQALSLLADLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFLHAADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|183597049|ref|ZP_02958542.1| hypothetical protein PROSTU_00285 [Providencia stuartii ATCC 25827] gi|188023709|gb|EDU61749.1| hypothetical protein PROSTU_00285 [Providencia stuartii ATCC 25827] Length = 689 Score = 615 bits (1585), Expect = e-173, Method: Composition-based stats. Identities = 200/722 (27%), Positives = 338/722 (46%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L + L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDSADIAHGEVSWFAAPRRLALKVAALADS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 SP++ E+ GP + G KA +G+ R G+ ++K D KG+ L + Sbjct: 65 SPDREVEKRGPAISAAFGADGQPTKAAEGWARGCGISVDQAERLKTD--KGEWLLYRAQV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L +V ++ K+P PK MRW + ++RP+ ++ +L ++ + Sbjct: 123 KGVAVSELLVDMVSRSLAKLPIPKLMRWGDKETH-----FVRPVHTVTLLLGSD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 +D ++ I G GHRF + D Y L V+ D E R+ I DA + Sbjct: 173 VDGEVLGIKSGRTIRGHRFMGESEFTIDHADQYPAILRERGKVIADYEERKAVIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AALALGGKADLTDSLLEEVASLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 NAGNLMPNFIFVANIESSD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ R+ L +A I ADV RA Sbjct: 339 -------KQRLEDNLPRLET--VLFQQQLGTLRDKTDRLEALSGWVAAKIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A++E +PR + +P+ +S Sbjct: 390 GLLAKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVALALKEQYQPRFAGDALPSTDVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 ++LA+K+DTL + I + P G KDP+ALRRA LG++RII+E + L + E+ Sbjct: 450 AALALAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKGYQLDLVEMTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L + +K + Sbjct: 510 LYGDKLTNKNVVNDVVEFMLGRFRSWYQELGYSIDTIQAVLARRPTSPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ IL+ K N +++ ++ L E +L + ++ Sbjct: 570 FRTLEDAEALAAANKRVSNILS---KSNEKLADKVLASVLKAPQEVKLATHLVVLQEKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y L S+ E ++ FF V+V +D VR NRL+LL ++++ L V ++ Sbjct: 627 PMFAERNYQDALVELASLREVVDAFFADVMVMDEDEAVRINRLTLLSQLRDLFLKVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|293393757|ref|ZP_06638064.1| glycyl-tRNA synthetase [Serratia odorifera DSM 4582] gi|291423584|gb|EFE96806.1| glycyl-tRNA synthetase [Serratia odorifera DSM 4582] Length = 689 Score = 615 bits (1585), Expect = e-173, Method: Composition-based stats. Identities = 198/720 (27%), Positives = 326/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFSAELDNANLAHGEVNWFAAPRRLALKVANLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++K D KG+ L + Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAQV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L + + Sbjct: 123 KGQSAQQLLAGMVSTALSKLPIPKLMRWGDKTT-----QFVRPVHTVTMLL-----GDAL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I GHRF +++ D Y + LE V+ D R+ I DA Sbjct: 173 IPGTVLGIDSARTVRGHRFMGEAQFTLENADQYPQILLERGKVVADYAARKAIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAEKIGGKADLSESLLEEVASLVEWPVVLTARFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 AAGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 339 -------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALSGWIAGQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPQSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAAR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L +K + Sbjct: 510 LYGSKLTNANVVDDVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTKPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLEEAAALAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY L ++ ++ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PFFAEGRYQDALVELAALRATVDEFFESVMVMAEDDAVRVNRLTLLSKLRELFLQVADIS 686 >gi|86748220|ref|YP_484716.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris HaA2] gi|86571248|gb|ABD05805.1| glycyl-tRNA synthetase, beta subunit [Rhodopseudomonas palustris HaA2] Length = 760 Score = 615 bits (1585), Expect = e-173, Method: Composition-based stats. Identities = 303/768 (39%), Positives = 417/768 (54%), Gaps = 77/768 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRLVTDKLVAEGLVYEGAKAFATPRRLTLTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + I+KDPKKGD Y+A++ KP + Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEATIQKDPKKGDFYVALIEKPGKPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV ++ PWPKSMRW + A W+RPL SI+ + + ++ D+ Sbjct: 121 IDVLAEILPVIVRTFPWPKSMRWGERSAKPGALQWVRPLHSIVATFGIDTEEPDVVAFDI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP I V+ + Y L A V+LDP+ RR+ IL DA LA A Sbjct: 181 SGIQAGQVTRGHRFMAPDEISVRRFEDYEAKLYAAKVVLDPQRRRDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 ELVED+ LL+E+ GLVEW MGSFD+ +L +P E+IR TI+ NQKCFV G L Sbjct: 241 YELVEDQGLLDEVSGLVEWPVALMGSFDEAFLSIPGEVIRATIRANQKCFVVSDPATGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL +NI+ASDGGAAI GN RV+ ARL DA HFW+ D +LP Sbjct: 301 ANKFILTANIEASDGGAAITAGNERVIRARLSDARHFWETDHKSLPEYRDSGL------- 353 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 +PLDQR+ ++ +VFHA +GTQGER+ RI L ++IA L+ AD RA L+K Sbjct: 354 ---RPLDQRLKKIRDQKIVFHASLGTQGERIDRIIRLAREIAPLVGADPDKAARAAELAK 410 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +SI V+L Sbjct: 411 ADLVTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPADRVPTDPVSIAVAL 470 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-------------- 525 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++++N I + L Sbjct: 471 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLVDNGIRMHLQRKSLLIEMRFRIL 530 Query: 526 ------------------------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 + LI ++ + + D + L Sbjct: 531 GALARERGFTKQLTSTLDILNSDKDHASLEVELISSLERSIEGLYSEIFAKADAAQLNLL 590 Query: 562 PENDN-----LLTIVDLIKHLNEFFSSAKGEKFLLSAKRI-------------------- 596 + L ++ F+ + L+ +R+ Sbjct: 591 SFFADRLKVQLRDQGARHDLVDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLLAGTK 650 Query: 597 --FQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 IL IEEKK+ R + EK L A I E++ + + Sbjct: 651 RAANILRIEEKKDGRAFDGAPDASLYAQDEEKALAAAIDRARAEATEAVAREDFAAAMTA 710 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ FF+ V VN DD+ VR+NRL LL I+ V + KI Sbjct: 711 MAGLRPAVDAFFEHVTVNADDKSVRENRLKLLNEIRAATRAVADFSKI 758 >gi|330965130|gb|EGH65390.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. actinidiae str. M302091] Length = 684 Score = 614 bits (1584), Expect = e-173, Method: Composition-based stats. Identities = 205/725 (28%), Positives = 331/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVFLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDAGGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LAS + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VEELASQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDADGKLLPRFITVANIESKD-PTQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEAEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKVKPAGLAEQVVEFIFDRLRARYEDEGVEVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLARLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|269468521|gb|EEZ80175.1| glycyl-tRNA synthetase, beta subunit [uncultured SUP05 cluster bacterium] Length = 678 Score = 614 bits (1584), Expect = e-173, Method: Composition-based stats. Identities = 216/714 (30%), Positives = 367/714 (51%), Gaps = 57/714 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ +EE+P ++ K + L+ L L E + + + + TP RL + ++ L Sbjct: 5 DFLLELGTEELPPKLLQKISNALTTNLTDQLSELKLSFGKVESFATPRRLAVLVRDLQLQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 ++ ER GP + A +A++GF +S G+ K K D Y + D Sbjct: 65 QDDQTVERKGPALSAPDQAVEGFAKSCGVSKQDLSH--KAFGKADYYFFTKEQKGLKTTD 122 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 +L+ +V AI+K+P K MRW F+++RP ++ +L +E I+ + Sbjct: 123 LLEDVVDTAIKKIPIAKPMRWGNLD-----FTFVRPTHWLVMMLGSE-----IVPATVMG 172 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGL 241 + GN T G RF + + Y + L A + +D + R+ I ++AS Sbjct: 173 LSAGNTTKGLRFTGEQEFGIDNAADYQQTLFDRAQIEVDFDARKQIIRKQVMQVASKSKA 232 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 V D+ LL+E+ LVE+ F G FD+K+L +PEE + +K++QK F L Sbjct: 233 NAVIDESLLDEVCALVEYPCAFSGGFDQKFLSVPEEALISAMKSHQKYFHMVDDNEKLLP 292 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 FI V+NI++SD + I+ GN RV+ RL D+ FW++D+ Sbjct: 293 SFISVANIESSD-LSVIIDGNERVIRPRLSDSEFFWEKDKTE------------------ 333 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 L+ R+++L+ DV+F +G+ G++V RI L IA +I A+V RA +LSK+D Sbjct: 334 --SLESRLSKLN--DVLFMKLLGSMGDKVKRIESLSSYIAGVIGANVDYSARAGLLSKSD 389 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L +++V EF +LQG +G YA+ E+ S AI EH PR +++P+++ + V++AD Sbjct: 390 LVSDMVGEFADLQGVMGGYYALNDGEDESVSIAIREHYHPRFSGDSLPSSREGLVVAIAD 449 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---------- 531 KLDT+ + I + P+GSKDPYALRR LG++RI++E ++++ L I Sbjct: 450 KLDTITGIYGIGQGPTGSKDPYALRRMALGLLRIMVEGQLNLDLKALIAQSLSLHSSKVD 509 Query: 532 ----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ F DRL+ Y ++ + EA+L ++ ++ LN F ++ E Sbjct: 510 ASSADDIYQFMMDRLRAYYKEQKVSAKAFEAVLAVRPESPYDFHRRVEALNLFTQQSESE 569 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + S KRI IL K++ + ++ + +AEK LY +S+ + S Y Sbjct: 570 SLIESNKRIANIL----KEHDNLGTDVDTSVFVEDAEKALYEAVSNVAKDLSLSA---DY 622 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L + + I+ FFDQV+VN DD ++ +RL+LL +++++ L V ++ + Sbjct: 623 EQTMNKLLGLKDSIDSFFDQVMVNTDDEILKRSRLTLLNWVRSLFLSVADISYL 676 >gi|330500955|ref|YP_004377824.1| glycyl-tRNA synthetase subunit beta [Pseudomonas mendocina NK-01] gi|328915241|gb|AEB56072.1| glycyl-tRNA synthetase subunit beta [Pseudomonas mendocina NK-01] Length = 684 Score = 614 bits (1584), Expect = e-173, Method: Composition-based stats. Identities = 207/723 (28%), Positives = 340/723 (47%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + LK G+ Y R Y P RL + ++ Sbjct: 1 MSAKDFLVELGTEELPPKALKSLGDAFLAGIEKGLKAAGLGYAASRVYAAPRRLAVLIEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L ++ GP + G +A GF R G+ I + + G Sbjct: 61 LEEQQADRSMNLDGPPIQAAFDADGNPTQAALGFARKCGVD------IAEIDRSGAKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + ++L TIV ++ +P PK MRW+ ++RP + ++ + Sbjct: 115 AQHIPGQPAVNLLPTIVQDSLDDLPIPKRMRWAARRD-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + ++D ++ G ++ GHRFHA +++ S Y DL A VL D RR I + Sbjct: 165 GDAVVDCEILAQKAGRVSRGHRFHANRDVRISSPASYAEDLRSAYVLADFAERREIISHR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+A + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELAAAEQGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALISTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+N+++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDANGKLLPRFITVANVESKD-PAQIVSGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA+ + D Sbjct: 334 ----------KQKLEGFNQRL--ANVVFQAQLGSVFDKAQRVSALAGFIAREVGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E+ A+ E PRG +P+ Sbjct: 382 ARAGLLSKCDLATEMVSEFPEMQGIAGYYYALNDGESQDVALALNEQYMPRGAGAELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E +D+ L+ ++ Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKGLDLDLAAAVDF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F DRL+ D I + +A+ + L ++ Sbjct: 502 AVAQYAGKVKTDGLAAQVLEFIFDRLRARYEDEGIEVAVYQAVRAVNPTSPLDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + KR+ +L+ E ++ ++ Y +E L+A I Sbjct: 562 VQAFRKLPQAAALAAANKRVSNLLSKAE---GGVAAQVEAHYFDNPSEFALHAAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L S+ EP++ FF+ VLVN +D VR NR +LL ++ + L V Sbjct: 619 AVQPLAAARQYSEALAKLASLREPVDAFFEAVLVNAEDPRVRANRYALLARLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|256823752|ref|YP_003147715.1| glycyl-tRNA synthetase subunit beta [Kangiella koreensis DSM 16069] gi|256797291|gb|ACV27947.1| glycyl-tRNA synthetase, beta subunit [Kangiella koreensis DSM 16069] Length = 690 Score = 614 bits (1584), Expect = e-173, Method: Composition-based stats. Identities = 196/729 (26%), Positives = 347/729 (47%), Gaps = 69/729 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D L E+ +EE+P + ++ L L+ + ++ Y P RL L ++ Sbjct: 1 MSQHDLLFELGTEELPPKALKTLSDALRDNFAANLQSNDFTFDSIENYAAPRRLALTIRN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P+K ERLGP V G+ K A GF +S G++ +I+ D KG+ Sbjct: 61 LADSQPDKNVERLGPAVAGAFNDDGSAKPAAVGFAKSCGVEVDQLDRIETD--KGERLGY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + + ++++ ++ A++K+P PK MRW +IRP+ + + Sbjct: 119 TIAQKGQPLSELIEDMLNSALKKLPIPKPMRWGDRSE-----QFIRPVHWAVLLF----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++++ + + N + GHRF +P + S D Y+ L A V D E R+ I Sbjct: 169 GDQVLNATVLGVKTSNQSRGHRFMSPDWVTFNSADDYLSKLLTAKVNADYEQRKEQIRGQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A +G D+ LL+E+ LVEW G FD ++L +P E + ++ +QK F Sbjct: 229 VKAEADKLGGVAQIDESLLDEVASLVEWPVALTGKFDTEFLAVPAECLISSMAEHQKYFH 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++G L FI VSNI++ + ++++GN +V+ RL DA+ F++ D+ Sbjct: 289 VFDKDGKLMPNFITVSNIES-NRPQSVIEGNEKVIRPRLADAMFFFETDK---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L+ L VVF ++G+ ++ R+ L K IA I A Sbjct: 338 ----------KVSLESHQDHLQ--KVVFQKQLGSILDKSIRVAHLAKYIAPKIGAIPEDA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA +LSK DL T +V EF LQG +G YA EN + A+ E P+ + + N Sbjct: 386 ERAALLSKCDLATNMVGEFDNLQGIMGTYYARHDGENENVAIAMTEQYLPKFSGDELAKN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 + +++AD++D+L+ + + + P GSKDP+ALRRA +G++R I+EN++++ +++ + Sbjct: 446 SVGQCLAIADRVDSLVGIFGVGQGPKGSKDPFALRRAAIGLLRTIVENRLELDINELLSK 505 Query: 532 QN-------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 N L+ F +RL+ D+ + + I A++ L Sbjct: 506 ANQLISERIDKANFYSHKQEALLDFLFERLRALYLDQGVSSNTISAVMALRPTQPLDFDA 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 IK + F + + E + KR+ ILA K + E+ I L E+ L I+ Sbjct: 566 RIKAVQFFQTLPEAESLSAANKRVKNILA---KADIEVPDAIDSGLLQEAEEQALAKTIT 622 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 D + Y L S+ + ++ FFD+V+VN DD V+ NRL++L+ ++++ Sbjct: 623 DAEAKLSAMNS---YQDKLQHLASLRDDVDAFFDKVMVNADDAAVKANRLAMLKKLQDLF 679 Query: 693 LIVINVQKI 701 V ++ + Sbjct: 680 GSVADISLL 688 >gi|330898600|gb|EGH30019.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. japonica str. M301072PT] Length = 684 Score = 613 bits (1582), Expect = e-173, Method: Composition-based stats. Identities = 205/725 (28%), Positives = 330/725 (45%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLISA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADSNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELAAQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDGAGKLLPRFITVANIESKD-PAQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLIETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLEFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 IQ ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AIQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|253699299|ref|YP_003020488.1| glycyl-tRNA synthetase subunit beta [Geobacter sp. M21] gi|259511925|sp|C6E0B4|SYGB_GEOSM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|251774149|gb|ACT16730.1| glycyl-tRNA synthetase, beta subunit [Geobacter sp. M21] Length = 687 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 212/727 (29%), Positives = 341/727 (46%), Gaps = 68/727 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LEI EEIPA KA D+ +++ + Y + TP RL L +KG+ Sbjct: 1 MAKDLFLEIGCEEIPAGFVPKAMADMELLIKKEFDSARIEYGEIVTLGTPRRLVLAVKGV 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ +GP G KA GF R G+ + +KG+ AV Sbjct: 61 AERQPDAELTAMGPAKSHAYDADGNPTKAAQGFARGQGIDVSQLKLV--TTEKGEYLAAV 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + R ++L ++P I +P+ KSMRW+ + RP+ I + Sbjct: 119 KSEIGRETAELLPEMLPRLIGNIPFKKSMRWADFD-----VRFARPIHWIAALF-----D 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 K++ I G+ + GHRF A P V+ L HY+ + E V+ DP R+ I + Sbjct: 169 GKVVPFSFGNIDSGSASRGHRFMANTPFPVRDLAHYLEECERHFVIPDPNKRKEIIRAEI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R+A ++ D+ LLE++ LVE+ G+F +L +P E++ +++ +Q+ F Sbjct: 229 ERVAKQAKGNVLPDEALLEQVSYLVEYPSAVHGTFSPDFLVVPREVLITSMREHQRYFSL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI ++N D +V+GN RV+ ARL DA F+ D Sbjct: 289 VDDEGKLLPGFITINNTITED-PQVVVKGNERVLRARLSDARFFFDEDH----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALV 411 L+ R+ L VV+ AK+GT E++ R R LGK++AQ ++ V V Sbjct: 337 ---------KVRLETRVESLK--SVVYQAKLGTSYEKMERFRELGKRLAQRLNPSVIKQV 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA L KADL + +V EFPE+QG +G+EYA+ E + +AI EH P +P + Sbjct: 386 ERAATLCKADLVSGMVGEFPEVQGIMGREYALHDGEEPAVANAIAEHYLPTQAGGELPAS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 I VSLADK+DT+ + + P+GS DPYALRR+ LGII IILE PLS+F++ Sbjct: 446 DIGAFVSLADKMDTICGCFCVGLIPTGSADPYALRRSALGIINIILEKGYREPLSEFVKA 505 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++++ FF R + DR D +EA+ D+L+ I Sbjct: 506 SLDLLAAKATRPLAEVQKDVLDFFRGRFVNLMADR-FPSDAVEAVASVSFDDLVEAAAKI 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L F + ++ KR+ I+ + +S + AE L+ ++ Sbjct: 565 EALAGFRNRDDFGPLAVAFKRVCNIVK------DGVDTPVSAELFQDAAEGELHQALTQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + +++ Y + ++ +++FF++V+V DD VR NRL+LL I + Sbjct: 619 SGKVADALKKADYLAALTEIATLKPAVDLFFEKVMVMADDERVRQNRLALLTGIARLFAS 678 Query: 695 VINVQKI 701 + + ++ Sbjct: 679 LADFSRL 685 >gi|237806784|ref|YP_002891224.1| glycyl-tRNA synthetase, beta subunit [Tolumonas auensis DSM 9187] gi|259511933|sp|C4L762|SYGB_TOLAT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|237499045|gb|ACQ91638.1| glycyl-tRNA synthetase, beta subunit [Tolumonas auensis DSM 9187] Length = 690 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 204/726 (28%), Positives = 334/726 (46%), Gaps = 63/726 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M +FL+E+ +EE+P + K A+ + L + G+ +Q ++ + P RL L + Sbjct: 1 MATENFLIELGTEELPPKALRKLAQAFADNFTAELDKAGLAHQGVQWFAAPRRLALKVAA 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ +K E+ GP V G A G+ +S G++ ++ D KG+ + Sbjct: 61 LADKQADKQVEKRGPAVSAAFDAAGNPTPAAAGWAKSNGIEVAQADRLATD--KGEWLVY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L + A+ +P PK MRW + +IRP+ ++ + AE Sbjct: 119 RANVAGQPTTGLLPAMAATALAGLPIPKPMRWGAKRT-----QFIRPVHTLCMLFGAE-- 171 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILN 230 ++D ++ + I GHRF ++ D Y L E+ V D E R+ I Sbjct: 172 ---LVDGEILGLRSARIIRGHRFMGEAQFEISHADQYPALLLEKGKVQADYETRKAFIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A A +G ++ LLEE+ LVEW + +F++K+L +P E + T+K +QK F Sbjct: 229 GAEAAAQQLGGIADIEESLLEEVTSLVEWPVILTATFEEKFLAVPAEALVHTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI VSNI++ D A I+QGN RVV RL DA F+ D+ Sbjct: 289 PVYDNNGKLLPNFIFVSNIESKD-PAQIIQGNERVVRPRLSDAEFFFNTDK--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 L R+ LD V+F ++GT ++ RI + IA I ADV Sbjct: 339 -----------KHSLASRLESLDT--VLFQQQLGTLKDKSVRIAEMSAFIAAQIGADVEH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA +E A+ E PR +N+P Sbjct: 386 ATRAGLLSKCDLMTNMVMEFTDTQGVMGMHYARHDHEAEDVAVALNEQYMPRFAGDNLPN 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 ++ V++ADKLDTL + I + P G KDP+ALRRA +G +RII+E ++D+ L + Sbjct: 446 GLVACAVAIADKLDTLAGIFGIGQAPKGDKDPFALRRAAIGTLRIIVEKQLDLDLVDVVS 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 ++ F R + + I D+I+A+L +K Sbjct: 506 KAAELYDGKISNKSVVDEVVDFMLGRFRASYQEAGIAVDVIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + E + KR+ ILA K + ++ + L AE+ L ++ Sbjct: 566 AVSHFRTLDAAEALAAANKRVSNILA---KFDGKLKDSVDAALLQDPAEQVLAQQVAAME 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 T + + Y L ++ E ++ FFD+V+V DD ++ NRL+LL ++ + L Sbjct: 623 TKLAPLFANGEYQLALTELAALREAVDTFFDKVMVMADDEALKLNRLTLLARLQALFLQA 682 Query: 696 INVQKI 701 ++ + Sbjct: 683 ADISLL 688 >gi|238783054|ref|ZP_04627081.1| Glycyl-tRNA synthetase beta subunit [Yersinia bercovieri ATCC 43970] gi|238716055|gb|EEQ08040.1| Glycyl-tRNA synthetase beta subunit [Yersinia bercovieri ATCC 43970] Length = 689 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 205/722 (28%), Positives = 327/722 (45%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDSANLPHGEVIWYAAPRRLALKVVNLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGESAQLLLAGMVNAALAKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I I GHRF + + + Y + LE V+ D E R+ I DA Sbjct: 173 IAGTVLGIDSDRIIRGHRFMGEAEFALDNAEQYPQALLERGKVIADYELRKAIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 TAGNLLPNFIFVTNIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 339 -------KKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N I+ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPIA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNAKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDTLNDHVRASVLKDPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E I+ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PIFAAGQYKEALVELAALRETIDEFFDSVMVMAEDDAVRINRLTLLSKLRELFLQVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|332188373|ref|ZP_08390098.1| glycyl-tRNA synthetase, beta subunit [Sphingomonas sp. S17] gi|332011602|gb|EGI53682.1| glycyl-tRNA synthetase, beta subunit [Sphingomonas sp. S17] Length = 694 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 261/727 (35%), Positives = 380/727 (52%), Gaps = 61/727 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPARMQ A E L+ + L + G+ + Y P RL L KGL Sbjct: 1 MTDFLLELRSEEIPARMQAGARESLAKLFTAELAKAGLSAGEIVTYAGPRRLALIAKGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GPR A +A++GFLR TGL ++ V A+ KP R Sbjct: 61 AATEAVSEEVKGPRASAPPQALEGFLRKTGLTREQL------TERDGVLFAITEKPGRAT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL +P ++ PWPKSMRW + + W+RPL +I+ + E ++ ++ Sbjct: 115 AEVLAEAIPAIVRAFPWPKSMRWGAESASTESMRWVRPLHAIVALFGGE-----VVPFEV 169 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN+T GHRFHAP I + D Y+ L A VL+D + R I A LA+ G Sbjct: 170 AGITSGNVTRGHRFHAPAEITLTGADTYVEQLRAAKVLVDQDERAAIIRERASALAAEAG 229 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED+ L+ E GL EW +G FD+ YL +P E+I+LT + NQK FV R+ +G LA Sbjct: 230 LELVEDEGLVAENAGLTEWPVPLLGRFDEAYLDVPPEVIQLTARVNQKYFVCRSADGKLA 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F+ +NI+A+DGG IV+GN +V+AARL DA F++ D Sbjct: 290 NAFVCTANIEATDGGTKIVEGNGKVLAARLSDARFFYETD-------------------- 329 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---IDADVALVDRAIVL 417 L LD +L+ +VFH K+GT +V R+ L + +A + D L RA L Sbjct: 330 LKTKLDDLRPKLE--KIVFHEKLGTVAGKVERVAKLAEWLASEGIVPNCDSVLARRAAEL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL T +V EFPELQG +G YA Q E+ + +A+ +H KP G ++VP+ +++ V Sbjct: 388 AKADLVTGMVGEFPELQGLMGGYYAAAQGEDTAVAEAVRDHYKPVGQGDDVPSAPVTVAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN---- 533 +LADKLDT+++F++I+EKP+GSKDP+ALRRA LG+I ++L N + L Sbjct: 448 ALADKLDTIVSFFSIDEKPTGSKDPFALRRAALGVIALVLSNGLRGSLYSLFHQSAPEAG 507 Query: 534 ------------LILFFHDRLKLYLHDRDIRHDLIEAILRPEND-------NLLTIVDLI 574 F DRLK+ +RHD+I+A++R D +L+ ++ + Sbjct: 508 DGDMGQVVAADYFYDFVIDRLKVQQRSEGVRHDVIDAVVRMGGDDDIGGERDLVRLLARV 567 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L F ++ G L KR IL E + + +P Y L AE L A + Sbjct: 568 RALQAFVTTDDGTNLLAGYKRAANILKKEGVEGDQ--NWTAPTYTLEPAEADLIAALDAA 625 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 +++ + + L S+ PI+ FFD V VN D R RL+LL ++ + Sbjct: 626 EPKAAQAVKAEDFEAAMAALASLRAPIDRFFDDVTVNDADAVKRTARLALLARVRAAVHT 685 Query: 695 VINVQKI 701 V + +I Sbjct: 686 VADFSRI 692 >gi|148654007|ref|YP_001281100.1| glycyl-tRNA synthetase subunit beta [Psychrobacter sp. PRwf-1] gi|148573091|gb|ABQ95150.1| Glycine--tRNA ligase [Psychrobacter sp. PRwf-1] Length = 697 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 219/733 (29%), Positives = 356/733 (48%), Gaps = 70/733 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ SEE+P + + L + L+E + Y +++ Y P RL + ++G+S Sbjct: 1 MSTILFELGSEELPPKSLKPLRDSLKASVESQLQEANISYDSLKAYAAPRRLAIEIEGIS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++ E++ GP V G +A +GF + G+ I+ D KGD L Sbjct: 61 EKQPDRTEQKRGPAVKAAYDAEGKPTRAAEGFAKGLGIDASELITIETD--KGDYIGYEL 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++L I A+ +P K MR + ++RP+K ++ + + Sbjct: 119 TIQGQATTELLPNIFQTALDNLPIAKRMRSGASRE-----EFVRPVKWLVLM-----QDD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ID ++ + GN T GHR+H+P+PI + Y+ LE A V+ D + R+ I Sbjct: 169 QVIDATVQGLDAGNQTLGHRYHSPNPITIAHASDYLNVLENAKVIADFDRRQQLISERVT 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA V + +DLL+E+ LV+ SF++++L +P+E + T++ +QK F Sbjct: 229 ALADEVNARAIVPEDLLDEVTSLVDLPVALRASFEERFLQVPQEALISTMQADQKYFCLT 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI +SNI++ D + +V GN +VV RL DA F+ +DQ Sbjct: 289 DSEGKLQPYFIFISNIESKD-PSQVVSGNEKVVRPRLADAEFFFLQDQ------------ 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI--------- 404 +PL + L + VF K+GT E+ RI L IA Sbjct: 336 --------KQPLIEMAESLK--NRVFQDKLGTIWEKSERIAKLAAFIAATFRQQNIAGYA 385 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D DVA RA +LSKADL + +V EFPELQG G YA L E + AIEE P+ Sbjct: 386 DIDVAQATRAAMLSKADLTSTLVGEFPELQGVAGTYYARLNGEPEAIAAAIEEQYLPKFS 445 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P + I ++LAD++DTL+ + I++ P+GSKDP++LRR+ +G++RI++E ++ I Sbjct: 446 GDKLPQTAVGICLALADRIDTLVGIFGIDQAPTGSKDPFSLRRSAIGVLRILIEKQLPIN 505 Query: 525 LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L IE +I F + R + ++ + D I+A+L L Sbjct: 506 LVSLIEQAILNYQDKLPKAGETLTQVIDFINSRYRAMYTEQGVSVDTIQAVLAINPHMPL 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I +NEF S + KR+ ILA K ++ + L +AEK LY Sbjct: 566 DFDQRIHAVNEFRSLPQAATLAEINKRVANILA---KSEGQVGEAVDESLLTEDAEKALY 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +S T + +Y QI L ++ P+ FFD V+VN +D ++ NRL+LL+ + Sbjct: 623 QALSTAKTEVAPLQAEAQYTQILQSLATLEVPLTGFFDNVMVNSEDEALKVNRLTLLKQV 682 Query: 689 KNIILIVINVQKI 701 + + L V +V ++ Sbjct: 683 RELFLTVADVGEL 695 >gi|37524312|ref|NP_927656.1| glycyl-tRNA synthetase subunit beta [Photorhabdus luminescens subsp. laumondii TTO1] gi|81833305|sp|Q7MB99|SYGB_PHOLL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|36783735|emb|CAE12589.1| glycyl-tRNA synthetase beta chain (glycine--TRNA ligase beta chain) (GlyRS) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 689 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 202/722 (27%), Positives = 333/722 (46%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + Y + + TP RL L + L Sbjct: 5 TFLVEIGTEELPPKALRSLAEAFAANFAAELDNANLAYGEISWFATPRRLALKVANLDEA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDTEGKPTKAAEGWARGCGITAAQAERLVTD--KGEWLLYRALV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R ++++L +V A+ K+P PK MRWS + + RP+ ++ + +++ Sbjct: 123 KGRSVKELLAAMVNSALNKLPIPKLMRWSDKET-----QFARPVHTVTMLF-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ I + GHRF + + + Y L++ VL D R+ I D + Sbjct: 173 IEGEILGIKSARVIRGHRFMGESEFAIDNAEQYPEILQQRGRVLADYTTRKVLIKQDVEQ 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAIKLGGVADISDSLLEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI +SD I+ GN +VV RL DA F+K D+ Sbjct: 293 NAGKLMANFIFVANIDSSD-PQQIIDGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 339 -------KQRLEDNLPRLET--VLFQKQLGTLRDKTDRIQALAGWIAEKIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ +S Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVALALNEQYQPRFAGDELPSTGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG +RII+E K+ + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPRGDKDPFALRRAALGALRIIVEKKLPLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + ++ R D I+A+L +K + Sbjct: 510 LYGDKLTNAKVTDDVVEFMLGRFRAWYQEQGYRVDTIQAVLARRPTQPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K ++ ++ L E +L + + Sbjct: 570 FRTLDEAAALAAANKRVSNILA---KSEETLNEKVDVSTLKAPEEVKLATHLIVLQDKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ E ++ FFD V+V +D +VR NRL+LL ++++ L V ++ Sbjct: 627 PLFAEGHYQEALVELASLREVVDAFFDNVMVMDEDLQVRVNRLTLLSELRDLFLRVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|163738407|ref|ZP_02145822.1| glycyl-tRNA synthetase subunit beta [Phaeobacter gallaeciensis BS107] gi|161388328|gb|EDQ12682.1| glycyl-tRNA synthetase subunit beta [Phaeobacter gallaeciensis BS107] Length = 754 Score = 612 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 272/778 (34%), Positives = 395/778 (50%), Gaps = 103/778 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRMTDGLVEAGLTYAGAHALSTPRRLTLAMEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA KAI+GFLR G+ D ++D KG VY A++ KP R Sbjct: 61 EHSPTVREERKGPKVGAPDKAIEGFLRGAGVT--RDQLEERDTPKGAVYFALIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PW KSMRW + W+RPL+SILCIL ED +++ L++ Sbjct: 119 AEIIAEVLEDTIRNFPWSKSMRWG-----TGSLRWVRPLQSILCILSKED-GAEVVPLNI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN TYGHRF AP I V D Y L+ A V+LDP R AI +A A A G Sbjct: 173 DGIASGNTTYGHRFMAPDQITVTGFDDYAAKLKRAHVVLDPAEREAAIRQEATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG+ D ++L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLMGAIDDEFLALPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D + Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFWENDLRTVTE-------------- 338 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + + +A+L +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 339 --QGFEPWVAKLG--NVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA +A E H P GP ++VPT +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPQDVANACEAHYSPLGPSDDVPTEPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + + + Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENDLRLSIQPIYTQGIQSQQIVD 514 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE---------------------------- 563 Q L L R K+ + + + L Sbjct: 515 QALELLLETRTKVQGIEETLADPNYQGSLISGTREALEKDLTAGRRELDKRESGYQTWNE 574 Query: 564 -----NDNLLTIV-DLIKH---------------------------LNEFFSSAKG---- 586 +LL+ D +K + + Sbjct: 575 MWEKAPADLLSFFHDRLKVFLRDQGIRHDVIDACIAMEGNDDLTLLVKRARALEDFMASD 634 Query: 587 --EKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 L KR ILA E+K+ E S ++ ++E L+ ++ I +++ Sbjct: 635 DGPNLLQGFKRANNILAQAEEKDGVEYSYGADKKFAEDDSEIALFDALASSEGAISSAIE 694 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + ++ P++ FF+ V VN D+ VR NRL+LL I+ + V ++ +I Sbjct: 695 AEDFAAAMGSMAALRAPVDAFFEAVQVNSDNEVVRRNRLNLLSQIRKVCGQVADLTRI 752 >gi|189424088|ref|YP_001951265.1| glycyl-tRNA synthetase subunit beta [Geobacter lovleyi SZ] gi|238692124|sp|B3E621|SYGB_GEOLS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|189420347|gb|ACD94745.1| glycyl-tRNA synthetase, beta subunit [Geobacter lovleyi SZ] Length = 687 Score = 612 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 211/727 (29%), Positives = 343/727 (47%), Gaps = 68/727 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LLEI +EEIPA KA L ++ L+ + + + TP RL L++KGL Sbjct: 1 MSKELLLEIGAEEIPAGFVPKALASLEEMIRKELETARLCFDAIVTMGTPRRLTLHIKGL 60 Query: 60 SPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 P+ +GP G KA +GF R G+ + I KG+ Sbjct: 61 PVIQPDAELTAMGPSKKAAFDADGKPTKAAEGFARGQGVDVSALQVI--STDKGEYLAVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ R ++L I+P + +P+ KSMRW+ + RP+ I+ + Sbjct: 119 RQETGRPTHELLAEILPRLVAGIPFKKSMRWADLD-----IRFARPVHWIVALFDGI--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ I GNI+ GHRF A V+ HY+ + E V++D E R+ I + Sbjct: 171 --VVPFSFGPIQSGNISRGHRFMANSTFPVRDFAHYLDECERHFVIVDQERRKETIRKET 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 HR+A G L+ D+ LLEE+ LVE+ +GS ++L +P+E++ +++++Q+ F Sbjct: 229 HRVAKTTGGHLLPDESLLEEVTYLVEYPSAIIGSIPAEFLVVPKEVLITSMRSHQRYFSV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI + N A D A +V+GN RV+ ARL DA F+ D+ Sbjct: 289 VDENGKLLPYFITIPNTLAED-PAVVVRGNERVLRARLSDARFFFDEDRKL--------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALV 411 L+ R+ L VV+ K+GT E++ R R L +++A+ ++ A Sbjct: 339 -----------RLESRVESLK--SVVYQQKLGTSYEKMERFRALAEQLAEQLNPAAKQQA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 R L KADL + +V EFPE+QG +G+EYA+ E + +AI EH P ++P + Sbjct: 386 ARTAFLCKADLVSGMVGEFPEVQGIMGREYALHDGEETAVANAIAEHYLPTQAGGDLPAS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 I VSLADKLDTL + + P+G+ DPYALRRAT+G+I IIL+ + LS I+ Sbjct: 446 DIGAFVSLADKLDTLCGCFGVGLIPTGAADPYALRRATIGMISIILDKGYSLSLSGLIDK 505 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +++ FF R D++EA + D+L + I Sbjct: 506 SLELLAAKLTRPRDEVRHDVLEFFRGRFVNL-QGNAYPADVVEAAMAAGFDDLADCAERI 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L+ F + ++ KR+ I+ I ++P EAE LY V+ + Sbjct: 565 RALDTFRQRDDFQPLTVAFKRVCNIIK------EGIDAPVAPALFQDEAEHTLYRVLQET 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++Y + + + ++ FFD V+V +D VR+NRL+LL I + Sbjct: 619 KLSASDKIQQQQYLEALTDIAGLKWAVDAFFDAVMVMAEDSAVRNNRLALLTTINRLFSR 678 Query: 695 VINVQKI 701 + + ++ Sbjct: 679 IADFGRL 685 >gi|121534207|ref|ZP_01666032.1| metal dependent phosphohydrolase [Thermosinus carboxydivorans Nor1] gi|121307310|gb|EAX48227.1| metal dependent phosphohydrolase [Thermosinus carboxydivorans Nor1] Length = 685 Score = 612 bits (1577), Expect = e-172, Method: Composition-based stats. Identities = 212/730 (29%), Positives = 341/730 (46%), Gaps = 73/730 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI +EEIPA+ A L I L+ V + N+R TP RL L + + Sbjct: 1 MAKDLLLEIGTEEIPAKFMPGALAQLESIAKSKLETYRVSFSNVRVVGTPRRLALIVYQV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 ++ E GP G KA GF RS G+ K A+ Sbjct: 61 EEKQTDRKSENKGPSLKIAYDEKGLPTKAALGFARSQGVDVSQLV------AKDGYVYAI 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + R ++++L ++P I + +PK+MRW + RP++ ++ + Sbjct: 115 VEEAGRPVQEILPILLPEIILALSFPKNMRWGDLD-----VRFARPIRWLVALY-----G 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++ L + GN+T GHRF + P+ + S D Y L E V++D + RR I Sbjct: 165 NEVVPFTLAGVASGNMTQGHRFLSKGPVVISSPDDYFAKLAEHHVMVDQDVRRRVIREQV 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A G + D++LLEE++ LVE+ G F++KYL LP E++ ++ +Q+ F Sbjct: 225 ESIAVDQGGVVSIDEELLEEVVYLVEYPTALYGRFEEKYLSLPPEVVITPMREHQRYFPV 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L FI V N A + + GN RV+ ARL DA F+ DQ Sbjct: 285 FGKDGKLLPVFITVRNGGA-EYIDIVRHGNERVLKARLADAQFFFTEDQ----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 PL +R+ +L +VF +GT ++ R+ L IA+ ++ Sbjct: 333 ---------KTPLAERVEKLKT--IVFQEGLGTLYDKTLRLARLAAVIARKAGLPESEIP 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 ++R+ L+KADL T +V EF ELQG +G+EYA L E + AI EH PR + +P Sbjct: 382 TIERSAYLAKADLVTGMVYEFTELQGIMGREYARLSGEPEAVAQAIFEHYLPRFAGDKLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + V +ADKLD ++ ++ P+GS+DPYALRR LGI+ I+++ K + L++ + Sbjct: 442 QSPAGRVVGIADKLDNIVATFSRGLIPTGSQDPYALRRQALGIVNILIDAKYHLSLTEMV 501 Query: 530 ED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + + FF R+K L + +RHD+I+A++ DNL Sbjct: 502 QHTMDLLGIHDPDRRTKLIDEIGDFFRLRIKNILTEEGMRHDMIDAVIAAGTDNLYDTWL 561 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K L + ++ + + R + I+ I P EAE LY Sbjct: 562 RAKALAFEGGTMAMQRAVQAFTRAGNLAKNA------ITETIDPSLFSTEAEHNLYQAYL 615 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + E + + Y + ++ + PI+ FF V+V V+D VR+NRL+LL+ I + Sbjct: 616 SARQTVAEKLHVRDYVGVLKVMAEMAGPIDAFFGAVMVMVEDMAVRNNRLALLKAITGLT 675 Query: 693 LIVINVQKIV 702 V ++ KIV Sbjct: 676 ANVADLSKIV 685 >gi|88813030|ref|ZP_01128272.1| Glycine--tRNA ligase [Nitrococcus mobilis Nb-231] gi|88789663|gb|EAR20788.1| Glycine--tRNA ligase [Nitrococcus mobilis Nb-231] Length = 702 Score = 612 bits (1577), Expect = e-172, Method: Composition-based stats. Identities = 209/724 (28%), Positives = 349/724 (48%), Gaps = 65/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ +EE+P + + E + +I L + + + + R + TP RL + ++G++ Sbjct: 7 DLLVELGTEELPPKGLRRLMESFASQVIAGLDQAELSHADHRCFATPRRLAVLVRGVALQ 66 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P + ER GP G +A GF RS G++ C+++ KG + Sbjct: 67 QPTRQIERKGPAWSVAYDAAGQPTQAALGFARSCGVEIEQLCRLETT--KGVWLGYRGTE 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R ++L I+ A+ ++P K MRW S ++RP+ ++ +L E++ Sbjct: 125 PGRTAAELLPEIIVQALARLPIAKRMRWGD-----SPAEFVRPVHWLILML-----GEEV 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I L + GN + GHR H P PI ++ Y L E V+ D E RR IL Sbjct: 175 IPATLLDTVSGNFSRGHRIHHPQPIALREPLEYSDRLHEEGCVIADFEARRERILAQVTH 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G + + D LL+E+ LVEW G+FD+ +L +P E + +++ +QK F R+ Sbjct: 235 CAEALGAQALWDDALLDEVTALVEWPVALAGTFDETFLRVPPEALISSMQGHQKYFPLRS 294 Query: 295 R-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + + L FI V+N+++ D A ++ GN RV+ RL DA FW +D+ Sbjct: 295 KADTGLLARFITVANLKSQD-PAQVIAGNERVIRPRLADAAFFWDQDRR----------- 342 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 +PL +R+ +L V+F ++G+ ++ +RI LG+ A ++R Sbjct: 343 ---------RPLAERIPQLK--HVLFQKQLGSLYDKSARIGALGRHFAADFGVTGDQIER 391 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 LSK DL TE+V EFPELQG +G+ YA E + A++E +PR + + + + Sbjct: 392 VAWLSKTDLLTEMVGEFPELQGVMGRYYAAHDGEEEAIALALDEGYRPRFAGDPIAASPL 451 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI---- 529 +++A++ DTLI +A+ + P+G+KDP+ALRRA LG++R +E + I L Sbjct: 452 GQLLAVAERADTLIGIFALGKTPTGAKDPFALRRAALGLLRTCIEGQRSIDLEALFRLAA 511 Query: 530 -----------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND-----NLLTIVDL 573 + Q ++ F DRL+ +R+ +L EA+ + Sbjct: 512 ELMPAEVDAARQIQPVLQFCLDRLRGLYLERNYPGELFEAVRTLTQQKHLIVDPWDFHRR 571 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + EF + S KRI IL ++ S + P++L E+RLY ++ Sbjct: 572 VMACAEFIQLPEATSLAASNKRIHNILRHAGADDQPFSP-VDPEHLEHPEERRLYEAVNA 630 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 I+ ++ Y L + EPI+ FFD VLV D+ VR NRL+LL + + L Sbjct: 631 LAGEIESQVNAGEYTAALRHLAILREPIDRFFDTVLVMADEPSVRINRLALLACVSQLFL 690 Query: 694 IVIN 697 V + Sbjct: 691 SVAD 694 >gi|134300311|ref|YP_001113807.1| glycine--tRNA ligase [Desulfotomaculum reducens MI-1] gi|238685553|sp|A4J7C9|SYGB_DESRM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|134053011|gb|ABO50982.1| glycyl-tRNA synthetase beta chain [Desulfotomaculum reducens MI-1] Length = 695 Score = 611 bits (1576), Expect = e-172, Method: Composition-based stats. Identities = 213/732 (29%), Positives = 351/732 (47%), Gaps = 71/732 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLE+ EE+PAR A L + L+E + Y +++ Y TP RL LY+K L Sbjct: 1 MAKDFLLEVGIEEMPARFLGPALTQLKEQTVKTLQELRIEYADIQTYGTPRRLVLYIKDL 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + +E GP G KAI GF RS G+ + + + + A+ Sbjct: 61 AENQAALEKEVKGPAKKAAFDAAGNPTKAILGFTRSQGVSMED--LVVRSIGQVEYLYAL 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 R+ R VL I P I + +PK MRW + RP++ +L + Sbjct: 119 KREEGRPTAQVLAEICPGLIAGLHFPKPMRWGELE-----LRFARPIRWLLALF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E ++ +L + TYGHRF + + + + + Y + A VL+DP R+ I Sbjct: 169 EAVVPFELANLQSNRFTYGHRFLSTGDLSIANPEDYFTKIRGAYVLIDPAERKELIWQQV 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+A G + +D+DLL+EI ++EW G+FD+ YL LP ++ ++ +Q+ F Sbjct: 229 QELATAEGGVVEKDEDLLDEITNILEWPTALCGTFDEDYLKLPGAVLVTPMREHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + EG L N FI V N + GN +V+ ARL DA F++ D Sbjct: 289 VSNEGKLLNKFIAVRNG-TRAYIEIVTAGNEKVLRARLADAAFFFEED------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-- 410 L +PL ++ L VVF +G+ ++V RI + +A+ + A+ Sbjct: 336 --------LKQPLASKVNGLQ--KVVFLEGLGSIADKVDRIGAMADHLAETLGANEEQRE 385 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R +L+KADL T +V EFPELQG++G+EYA+ E +AI EH PR + +P Sbjct: 386 NIQRGALLAKADLITNMVYEFPELQGEMGREYALRNGEAPEVAEAIFEHYLPRFAGDLLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +S+ADK+D+++ +AI +P+GS+DPYALRR LGI +++E I + L + + Sbjct: 446 ETLAGSVLSVADKMDSIVGCFAIGIQPTGSQDPYALRRQALGICHMLIEGNIHLSLRELV 505 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + FF RLK L+DR + +D ++A+L D++ + Sbjct: 506 QWAYQGYHEGVELKQDLNQVITEIEEFFKQRLKGILNDRGLSYDTVDAVLTAGFDDIADV 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 VD L F + + R + + ++ +L AE+ LY + Sbjct: 566 VDRGMALAAFRELPAFAALMTAFNRANNLAKHA------TTTQVQEVHLEHSAEQELYGL 619 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ ++ ++ K Y + +I P++ FF+ V+V V+D V+ NRL+LL+ + Sbjct: 620 LTKLEGEVRPLLEQKNYALALQKIATIQSPLDTFFESVMVMVEDEAVKTNRLALLKKLVG 679 Query: 691 IILIVINVQKIV 702 + + V + KIV Sbjct: 680 LSMNVADFSKIV 691 >gi|117924741|ref|YP_865358.1| glycine--tRNA ligase [Magnetococcus sp. MC-1] gi|254781855|sp|A0L7K9|SYGB_MAGSM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|117608497|gb|ABK43952.1| glycyl-tRNA synthetase beta chain [Magnetococcus sp. MC-1] Length = 700 Score = 611 bits (1575), Expect = e-172, Method: Composition-based stats. Identities = 216/730 (29%), Positives = 349/730 (47%), Gaps = 62/730 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F+ EI +EEIPARM A + + L+E G+ + + TP RL + + GL Sbjct: 1 MAEFMWEIGTEEIPARMLPGAITAMGELTRTALQEAGLGFAQVESQGTPRRLLVVVHGLH 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EER GP + G KA GF R G+ +++ KG L Sbjct: 61 DKQADVQEERRGPALQAAFDSDGNPTKAAQGFARGCGVDVDQLSRVE--TPKGTYLSYTL 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ + +VL I+ + +PWPK+MRWS S ++RP++S+ +L + Sbjct: 119 KQAGKGASEVLPGIMQQVFKALPWPKTMRWSDGES-----RFVRPVQSVTALLNGQQVAV 173 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + + + GHRF + VQ Y + + + V+L E R I Sbjct: 174 EL----AENVRYTDAVSGHRFMGKGAVVVQDYASYQQAMADGKVMLKSEDRMATIRAGVL 229 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A++VG + D+ L+ E L EW +G FD++YL +P E++ +++ +QK F Sbjct: 230 AQAASVGGVVASDEGLVAENASLTEWPVALLGRFDERYLEIPPEVLTTSMRYHQKYFPVL 289 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L F++++N++ D +V+G RV+ ARLEDA FW D+ Sbjct: 290 DAQGGLKPHFVVIANMETEDQ-TVLVRGYQRVLKARLEDAAFFWAEDR------------ 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALVD 412 L R+ L VV+ AK+G+ ++ R+ L IA + AL + Sbjct: 337 --------KIRLTDRLPDLQ--AVVWQAKLGSLFQKSQRMAHLASAIAARVAPQQAALAE 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC-CDAIEEHLKPRGPLENVPTN 471 +A + SK DL T +V EFPELQG +G Y + AI EH P G + +P + Sbjct: 387 KAGLYSKCDLVTGMVGEFPELQGIMGGYYLPRERAQDEVVALAIREHYMPAGAGDALPQS 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL-ENKIDIPLSQFIE 530 VSLADKLDTL+ + + P+G+KDP+ LRRA LG+IR++L E + +PL Q E Sbjct: 447 LCGRIVSLADKLDTLVGCFGMGITPTGTKDPFGLRRAALGVIRLLLQEQGLRLPLRQLCE 506 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + Q ++ FF+ RL+ +L + +DLI+A+ D+L V Sbjct: 507 EAYRQYGEIGLEMGEAQTVQGVLAFFYGRLQAHLKAEGVDYDLIDAVQGLNLDDLWDAVS 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 +K L F A E + + KR+ IL+ E +++L + L AE+ L A ++ Sbjct: 567 RVKALVAFKQDAAYEALVAANKRMANILSKVEDSALDLTLGVDEAVLKASAEQGLAAAVA 626 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + RY + L ++ I+ FFD+V+V +D VR NRL LL + + Sbjct: 627 AVEDRVKTHSSNGRYAEALGELAALRGVIDTFFDEVMVMDEDDAVRHNRLRLLATVLGLF 686 Query: 693 LIVINVQKIV 702 V +V +V Sbjct: 687 RQVADVSCLV 696 >gi|254515956|ref|ZP_05128016.1| glycyl-tRNA synthetase, beta subunit [gamma proteobacterium NOR5-3] gi|219675678|gb|EED32044.1| glycyl-tRNA synthetase, beta subunit [gamma proteobacterium NOR5-3] Length = 694 Score = 611 bits (1575), Expect = e-172, Method: Composition-based stats. Identities = 200/725 (27%), Positives = 337/725 (46%), Gaps = 61/725 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M LLEI EE+P+ + L ++ L E+G+ + + P RL + + Sbjct: 1 MSHQPLLLEIGCEELPSSSLEQLGIALHANVVAKLAEKGLSHGASHWFAAPRRLAVLVDD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L ++ +E LGP V G +A +GF G+ + D KG Sbjct: 61 LVDQGADETKEALGPPVAQAKDADGNWTRAAEGFAAKQGVSADDLELV--DTPKGQRLGF 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + L +V AI +P K MRW ++RP+ I+ + E Sbjct: 119 KQVVSGAQTRECLGELVNEAIADLPIAKRMRWGAARR-----EFVRPVHWIVLMYGDEHG 173 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++ I GNI+ GHRFHAP PI+++S Y + A V+ D + R + I Sbjct: 174 FG-----NVLGISSGNISKGHRFHAPDPIEIKSAKEYPSLMRNAWVIADFQERSHLIREQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A+A+G + + D DLL E+ LVEW GSFD +L +P E + +++++QK F Sbjct: 229 VDAAAAALGGQALIDTDLLGEVASLVEWPVALAGSFDTAFLEVPAEALISSMQSHQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L F+ VSNI++ D G + GN RV+ RL DA F+++D+ Sbjct: 289 VVDASGTLMPNFVTVSNIESRDPGQV-IGGNERVIRPRLADAAFFFEQDRQ--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L R++RL VVF ++G+ ++ R++ L ++A L AD Sbjct: 339 -----------HSLASRVSRLG--AVVFQKQLGSLLDKTQRVQRLAGELAALTGADKTQA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA L KADL +++V EF ++QG G YA E+ + DAI +H P +P Sbjct: 386 ERAAELCKADLVSDMVLEFADMQGIAGAYYARNDGEDSAVADAIAQHYWPTQAGSELPRG 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 +++ V+LAD+LDTL+ + I + P+GSKDP+ALRRA++ ++RI++E ++ + L Sbjct: 446 DVAVAVALADRLDTLLGIFGIGQPPTGSKDPFALRRASIAVLRIMIEKQLTLDLRDCLAI 505 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + + + DRL +I ++ A+ + ++ Sbjct: 506 AKAGFAEGVISDEAPEAVFNYMLDRLPALYESDNIPIEVFRAVRGSGSSRPSDFDRRVRA 565 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KR+ ILA E +R+ LE+S L E L I+ + Sbjct: 566 VQAFGQRPEAEALAAANKRVSNILAKAE--DRDQGLEVSAHLLKEPQETALSEAIAAAAS 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y L ++ EP++ FFD V+VN +D ++ NRL+LL ++ + + Sbjct: 624 DNVNALANADYASALSRLATLREPVDAFFDGVMVNAEDPALKANRLALLAQLREQFMHIA 683 Query: 697 NVQKI 701 ++ ++ Sbjct: 684 DISQL 688 >gi|77918213|ref|YP_356028.1| glycyl-tRNA synthetase subunit beta [Pelobacter carbinolicus DSM 2380] gi|123743123|sp|Q3A8N5|SYGB_PELCD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|77544296|gb|ABA87858.1| glycyl-tRNA synthetase beta chain [Pelobacter carbinolicus DSM 2380] Length = 688 Score = 611 bits (1575), Expect = e-172, Method: Composition-based stats. Identities = 200/725 (27%), Positives = 337/725 (46%), Gaps = 66/725 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + LEI +EEIPA A DL ++ L+ + ++ +R + TP RL L + G++ Sbjct: 3 AELFLEIGTEEIPAGFLPTAMADLERLIRKELETGRIGFETVRTFATPRRLVLAVTGVAS 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + GP V G KA GF RS G++ +++ KG+ Sbjct: 63 GQARQEVTASGPSVSVAFDADGNPTKAALGFARSNGVEVSDLE--RRETDKGEYLFVSKV 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L ++P I +P+ KSMRW + RP+ I+ + + Sbjct: 121 VEGRPTGELLPEMLPRIIAAIPFKKSMRWKDLD-----IRFARPMHWIVALFDG-----Q 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + GN++YGHRF AP +V SL+ Y+ + E+ V++DP RR I + Sbjct: 171 VVPFSYGNLTSGNLSYGHRFMAPDAFEVSSLEQYLVEAEKHFVIVDPVKRRQIISDQLAE 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + G +L D DLL+E+ LVE+ MG F+ YL LP EL+ ++ +Q+ F Sbjct: 231 VVGRCGGKLNPDDDLLDEVAFLVEYPAAVMGGFEDSYLQLPPELLITVMREHQRYFTVVD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI +SN +A D + QGN RV+ ARL DA+ FW D+ Sbjct: 291 DSGKLLPRFITISNTRAED-LTVVQQGNERVLRARLSDAMFFWNEDR------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA-QLIDADVALVDR 413 L+ R+ L +VV+ AK+GT E+V R + L ++A Q + V L +R Sbjct: 337 -------KVKLESRLDALK--NVVYQAKLGTSYEKVMRFKTLAVELAQQQVPEVVELTER 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+K DL T +V EF ELQG +G+EYA+L E+ AI EH P +P + + Sbjct: 388 AASLAKCDLETGMVFEFTELQGVMGREYALLDGEDPRVARAIFEHYLPVQAGGELPGDDV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 VS+ADK+D++ + + P+G+ DP+ALRR+ +GI+ IIL+ + L +E Sbjct: 448 GAFVSIADKIDSICGCFGVGLIPTGTADPFALRRSAIGILNIILDRGYRLSLPALVERSL 507 Query: 533 ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++ F R L + + +D+++A+L ++ + + +K Sbjct: 508 GLLADKLTRPATEVAADVLEFLRLRFFNMLTAQGLPNDVVDAVLSAAFEDPVDALQRVKG 567 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L F + E ++ KR+ I+ + + + E L+ + + Sbjct: 568 LASFREEGEFEALAVTFKRVVNIVK------GGVDTSVDSALFEADCEAGLFDALQNVTG 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + + P++ F+ V+V D V+ NRL+LL + + + Sbjct: 622 RFEQFVAEGAYLDALRTVGGLRSPVDALFEGVMVMSPDEAVKTNRLALLTAVARLFQGIA 681 Query: 697 NVQKI 701 + KI Sbjct: 682 DFSKI 686 >gi|70733526|ref|YP_257165.1| glycyl-tRNA synthetase subunit beta [Pseudomonas fluorescens Pf-5] gi|123776099|sp|Q4KKR8|SYGB_PSEF5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|68347825|gb|AAY95431.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas fluorescens Pf-5] Length = 684 Score = 610 bits (1574), Expect = e-172, Method: Composition-based stats. Identities = 206/723 (28%), Positives = 334/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + AE + L+ G+ +Q Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKALNTLAEAFLAGIEKGLQSAGLSFQAKHVYAAPRRLAVLITQ 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G++ Q G Sbjct: 61 LATQQPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGVELSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P PK MRW+ ++RP + ++ +L Sbjct: 115 SQSIKGKPTASLLPTIVEDSLNDLPIPKRMRWAARKE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++ID + G + GHRFH P +++ + +Y+ DL A VL D RR I Sbjct: 165 GDEVIDCTILAQKAGRDSRGHRFHHPQSVRITAPANYLADLRAAYVLADANERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + DLL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TAELATLQEGTAIVPADLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D I++GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKD-PRQIIEGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF K+G+ ++ RI L IA I D Sbjct: 334 ----------KQKLEDFNLRLQ--NVVFQEKLGSVYDKAERISKLAAFIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P+ Sbjct: 382 ARAGLLSKCDLATEMVGEFPEMQGIAGYYYALNDGEPEDVALALNEQYMPRGAGAELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E K D+ L+ + Sbjct: 442 VTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKKFDLDLNDAVAF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F DRL+ D + ++ + + L ++ Sbjct: 502 AVSAFGSKVKAAGLADQVLEFIFDRLRARYEDEGVDVATYLSVRALKPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ K + I +Y E LY+ I Sbjct: 562 VQAFRKLPEAAALAAVNKRVSNLLS---KIEGNVPTTIEAKYFDNANEFSLYSAIQQADQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L ++ EP++ FF+ V+VN +D +VR NR +LL ++ + L V Sbjct: 619 AVQPMAAARQYSETLARLAALREPVDAFFEAVMVNAEDAKVRANRYALLARLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|110679234|ref|YP_682241.1| glycyl-tRNA synthetase subunit beta [Roseobacter denitrificans OCh 114] gi|109455350|gb|ABG31555.1| glycyl-tRNA synthetase, beta subunit [Roseobacter denitrificans OCh 114] Length = 728 Score = 610 bits (1573), Expect = e-172, Method: Composition-based stats. Identities = 272/753 (36%), Positives = 388/753 (51%), Gaps = 79/753 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++ EEIPARMQ +AA+DL ++ L E G+ Y + + TP RL L L+G+ Sbjct: 1 MPDLLIELFCEEIPARMQRRAAQDLQKLVTDGLVEAGLTYASAAAFSTPRRLTLTLEGVL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GP+ A KAI+GFLR G+ + +D KG V A + K R Sbjct: 61 AASPTTVEERKGPKADAPDKAIEGFLRGAGVAREALET--RDTPKGPVLFAKITKEGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ ++ I+ PWPKSMRW W+RPL SILCIL E A +++ L + Sbjct: 119 AQIVAEVLEKTIRNFPWPKSMRWGAG-----TLRWVRPLHSILCILSDE-AGTQVVPLSV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V D Y L+ A V+LDP R + I +DA A A G Sbjct: 173 DHITAGDHTQGHRFMAPDRFTVTGFDDYAAKLKRAFVVLDPAERADMIWHDATNQAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAALLAEVAGLVEWPVVLMGRIGDDFLDLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW D Sbjct: 293 ERFVTVANRDTADNGATILAGNEKVLSARLADAKFFWDNDLRVA---------------- 336 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + + L+ +V FH K+GTQ ER++R+ L +++A ++ AD + A +KA Sbjct: 337 -KAGMGDWLKALE--NVTFHNKLGTQAERIARVAALARELAPMVGADSDEAEEAARFAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y ++ + A EEH P GP + VPT +S+ V+LA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYLKAAGKSDAIAAAAEEHYAPLGPSDAVPTASVSVAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---------- 530 DKLD WA NE P+GSKDPYALRRA L IR+ILEN++ +PL +E Sbjct: 454 DKLDQFTGMWAANELPTGSKDPYALRRAALSTIRLILENRLKLPLKNLLEISFSDRYEIA 513 Query: 531 ----------------------------------------DQNLILFFHDRLKLYLHDRD 550 L FFHDRLK+YL D+ Sbjct: 514 KLEVKRSVERVAHRYPTEKAELKKILEEELLKISSTVDTRKNGLSEFFHDRLKVYLRDQG 573 Query: 551 IRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR- 608 IRHD+I+A + P ND+L +V K L++ + GE + KR IL ++ + Sbjct: 574 IRHDVIDACIAMPGNDDLTLLVKRAKALSDVVGTEDGENLIQGFKRANNILTQAQEADGV 633 Query: 609 EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQV 668 E S ++ + E+ L+ + I +M + + + ++ PI+ FF+ V Sbjct: 634 EYSYGADAKFAETDEERALFKALDTAEAIITPAMKSEDFATAMSAMATLRAPIDAFFEAV 693 Query: 669 LVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN D+ VR NRL+LL I I L V ++ +I Sbjct: 694 QVNSDNPTVRRNRLNLLNRITQICLSVADLTRI 726 >gi|127510944|ref|YP_001092141.1| glycyl-tRNA synthetase subunit beta [Shewanella loihica PV-4] gi|166227926|sp|A3Q8T4|SYGB_SHELP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|126636239|gb|ABO21882.1| Glycine--tRNA ligase [Shewanella loihica PV-4] Length = 689 Score = 610 bits (1573), Expect = e-172, Method: Composition-based stats. Identities = 218/722 (30%), Positives = 351/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + AE L++ + Y++ Y P RL L + L Sbjct: 5 NLLIEVGTEELPPKSLRTLAESFLANFEEELQKAELSYESATWYAAPRRLALKVNALVTA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ ++ KG+ L + Sbjct: 65 QADKVVEKRGPAIAQAFDADGNPTKAAMGWARGNGITVEQAERL--TTDKGEWLLHKAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + + +IRP+ ++ ++ +++ Sbjct: 123 VGVETKSLVAEMAQRALDKLPIPKPMRWGSNKT-----QFIRPVHTVTMLM-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I +L I GHRF +++ D+Y+ LE V+ D + R I DA Sbjct: 173 IPGELLGIESARTIRGHRFMGVDTLELDHADNYLTALETQGKVMADYQARMAIIKADAQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G D+DLLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 233 AADAMGGIAEIDEDLLEEVTSLVEWPVVLTANFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI VSNI++ D A I+ GN +VV RL DA F++ D+ Sbjct: 293 KAGTLLPHFIFVSNIESKD-PAQIIAGNEKVVRPRLADAEFFFETDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+A L+ VVF ++GT +RV RI L IAQ I AD RA Sbjct: 339 -------KHSLESRLASLET--VVFQQQLGTIKDRVERISALAAFIAQGIGADSEQAGRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A+EE KP+ ++VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLDGETEAVALALEEQYKPKFSGDSVPTQPIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 I+V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+RI +EN + + L + Sbjct: 450 ISVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRICVENNLPLDLVDLVAKAQE 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D+ I D+I A+L + IK + Sbjct: 510 LHGANLSNADTAEQVLEFLMGRFRAWYQDQGISVDVILAVLARRPTSPADFDSRIKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + + KR+ ILA K +I+ +I L AE+ L + +++ ++ Sbjct: 570 FRSLEQAAALAAANKRVSNILA---KVEGDIASDIDSNLLQESAEQALASKLNELQPQLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL S+ E ++ FF+ V+V DD ++ NRL+LL ++ L ++ Sbjct: 627 PLFANADYQQALALLASLRESVDTFFEDVMVMADDEALKQNRLALLSKLRAQFLHAADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|229587588|ref|YP_002869707.1| glycyl-tRNA synthetase subunit beta [Pseudomonas fluorescens SBW25] gi|259511929|sp|C3KE40|SYGB_PSEFS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229359454|emb|CAY46295.1| glycyl-tRNA synthetase beta chain (ec 6.1.1.14) (glycine--trna ligase beta chain) (glyrs) [Pseudomonas fluorescens SBW25] Length = 684 Score = 610 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 201/725 (27%), Positives = 335/725 (46%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + A+ + L G+ ++ + Y P RL + L Sbjct: 1 MSAQDFLVELGTEELPPKALNTLADAFLAGIEKGLHSAGLKFEAKKVYAAPRRLAVLLTA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P++ GP G +A GF + G++ Q G Sbjct: 61 LETQQPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGVELSEIDQS------GPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P PK MRW ++RP + ++ +L Sbjct: 115 SQVITGKPTASLLPTIVEDSLNDLPIPKRMRWGARKE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++ID L G + GHRFH P +++ S +Y DL A VL D RR I Sbjct: 165 GDQVIDCTLLAQKAGRDSRGHRFHHPQAVRITSPANYAADLRAAYVLADANERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TEELARLQEGTAIVPPSLLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKD-PQQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF K+G+ ++ R+ L IAQ I D A Sbjct: 334 ----------KQKLEDFNLRLQ--NVVFQEKLGSVYDKAVRVSKLAAYIAQRIGGDAAWA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPDDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI+++ K+D+ L+Q + Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKKLDLDLTQAVVF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVGQFGAKVKQAGLAEQVLEFVFDRLRARYEDEGVDVSVYLSVRALQPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + KR+ +L+ E + ++ P E L + I+ Sbjct: 562 VQAFRKLPEADALASVNKRVSNLLSKAEGLG---NADVDPGLFADAKEFSLNSAIAKAEN 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + + Y + L ++ EP++ FF+ V++N +D VR NR ++L ++ + + + Sbjct: 619 AVKPLIAERNYAEALARLATLREPVDAFFEAVMINAEDAGVRKNRYAMLARLRGLFVNIA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISTL 683 >gi|332968464|gb|EGK07530.1| glycyl-tRNA synthetase beta subunit [Psychrobacter sp. 1501(2011)] Length = 697 Score = 610 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 214/733 (29%), Positives = 363/733 (49%), Gaps = 70/733 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ SEE+P + + L + LK+ + Y +++ P RL L ++G+S Sbjct: 1 MSTILFELGSEELPPKSLKPLRDSLQASVESQLKDADISYDSLKVMAAPRRLSLLIEGIS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++IE++ GP V G +A +GF + G+ I+ D KGD L Sbjct: 61 DKQPDRIEQKRGPAVKAAYDSEGKPTRAAEGFAKGLGIDVSELMTIETD--KGDYIGYEL 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++L I A+ +P K MR + ++RP+K ++ + + Sbjct: 119 TVQGQETTELLPNIFQNALDNLPIAKRMRSGASRE-----EFVRPVKWLVLM-----QDD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ ++ + GN T GHR+H+P P+ + Y LE A V++D + R+ I+ Sbjct: 169 QVVPATIQGLQSGNQTLGHRYHSPEPMVIPHAKDYESVLEAAKVIVDFDRRQQLIVEAVQ 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +L+ V E + +DLL+E+ LV+ SF++++L +P+E + T++ +QK F Sbjct: 229 KLSDEVNAEAIVPQDLLDEVTALVDLPVALRASFEERFLQVPQEALISTMQADQKYFCLT 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L FI +SNI++ D + +V GN +VV RL DA F+ +DQ Sbjct: 289 DKEGKLQPYFIFISNIESKD-PSQVVSGNEKVVRPRLADAEFFFLQDQ------------ 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI--------- 404 +PL + L + VF K+GT E+ RI L IA+ + Sbjct: 336 --------KQPLIEMAESLK--NRVFQDKLGTIWEKSERIAKLATFIARQLKEHAIADYA 385 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D +V RA +LSKADL + +V EFPELQG G YA L E + AIEE P+ Sbjct: 386 DIEVEQATRAAMLSKADLTSTLVGEFPELQGVAGTYYARLNGEPETIAAAIEEQYLPKFS 445 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P I I ++LAD+LDTL+ + I++ P+GSKDP++LRR+ +G++RI++E K+ I Sbjct: 446 GDVLPQTAIGICLALADRLDTLVGIFGIDQAPTGSKDPFSLRRSAIGVLRILIEKKLPIN 505 Query: 525 LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L + +E ++ F + R + ++ I D I+A+L + L Sbjct: 506 LKELVEQAINNYQGKLADESKTLTQVMDFINSRYRAMYTEQGISVDSIQAVLAINSHVPL 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + ++EF + + KR+ ILA K E+S +++ L EAEK LY Sbjct: 566 DFDQRLHAVSEFRNLPQAATLAEINKRVANILA---KSEGEVSDQVTEDLLAEEAEKTLY 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 ++ + Y++I L ++ P+ FFD V+VN +D ++ NRL+LL+ + Sbjct: 623 QAVTKAEATVAPLQADANYNEILQSLATLEAPLTGFFDNVMVNSEDEALKANRLTLLKQV 682 Query: 689 KNIILIVINVQKI 701 + + L V +V ++ Sbjct: 683 RELFLTVADVGEL 695 >gi|312958112|ref|ZP_07772635.1| Glycyl-tRNA synthetase beta subunit [Pseudomonas fluorescens WH6] gi|311287543|gb|EFQ66101.1| Glycyl-tRNA synthetase beta subunit [Pseudomonas fluorescens WH6] Length = 684 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 199/725 (27%), Positives = 336/725 (46%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + AE + L G+ ++ + Y P RL + L Sbjct: 1 MSAQDFLVELGTEELPPKALNTLAEAFLAGIEKGLHTAGLKFEAKKVYAAPRRLAVLLTA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P++ GP G +A GF + G++ Q G Sbjct: 61 LETQQPDRSINLDGPPRQAAFDADGNPTQAALGFAKKCGVELSEIDQS------GPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P PK MRW ++RP + ++ +L Sbjct: 115 SQVITGKPTASLLPTIVEDSLNDLPIPKRMRWGARKE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++I+ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVIECNILAQKAGRDSRGHRFHHPQSVRITSPASYLNDLRAAYVLADANERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TEELARLQEGTAIVPPSLLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKD-PQQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF K+G+ ++ R+ L IA I D A Sbjct: 334 ----------KQKLEDFNLRLQ--NVVFQEKLGSVYDKAVRVSKLAAYIAPRIGGDAAWA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEADDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI+++ K+D+ L+Q + Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKKLDLDLTQAVVF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVGQFGAKVKQAGLAEQVLEFVFDRLRARYEDEGVDVSVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + KR+ +L+ E + ++ P E L + I+ Sbjct: 562 VQAFRKLPEADALAAVNKRVSNLLSKAEGLG---NADVDPGLFADAKEFSLNSAIAKAEN 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + + Y + L ++ EP++ FF+ V++N +D VR NR ++L ++++ + + Sbjct: 619 AVKPLIAERNYAEALARLATLREPVDAFFEAVMINAEDAGVRKNRYAMLARLRSLFINIA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISTL 683 >gi|90415373|ref|ZP_01223307.1| glycyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2207] gi|90332696|gb|EAS47866.1| glycyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2207] Length = 693 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 211/725 (29%), Positives = 356/725 (49%), Gaps = 58/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFL+EI +EE+P ++ + +E ++ + LKE+ + + M + P RL + +K L Sbjct: 1 MSKDFLVEIGTEELPPKVLRQLSETVASGITQRLKEQQLGFNQMTAFAAPRRLAVLIKDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 +P++ GP + G KA + F R GL+ ++ ++ + D Sbjct: 61 DEQTPDQDIVSWGPPLKVAFDADGQPTKAAEAFARKNGLEVAVLAELVENDGQQDKLCVR 120 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 E +L ++ ++ +P PK MRW + ++RP++ + + Sbjct: 121 QSISGSNTEALLGEVINQSLAALPIPKPMRWGRSRQ-----EFVRPVQWAVVLF-----G 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + + +D+ + GN + GHRFH+ I++ S Y L +A V++D RR I Sbjct: 171 NETVAIDILGVTSGNHSRGHRFHSTGDIQITSPASYRDTLLDAFVMVDFAERRELIRQGV 230 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A + V D+ LLEE+ L EW MG F++ +L +P E + ++ +QK F Sbjct: 231 MAAAKTANGQAVIDESLLEEVTSLNEWPVPLMGRFEEHFLEVPAEALVSSMAQHQKYFHV 290 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L FI V+NI ++D ++ GN RV+ RL DA F+ D Sbjct: 291 VDANNKLLPLFITVANIASAD-PQQVINGNERVIRPRLADAAFFYNTD------------ 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L LD R L +VF +K+GT ++ +R+ L K +A + ADV Sbjct: 338 --------LKTTLDARRETLR--KIVFQSKLGTVYDKTARVSELAKILAPFVGADVTAAG 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSK+DL +E+V EF +LQG +G+ YA+ E+ + DA+ E PR + +P + Sbjct: 388 RAGELSKSDLVSEMVGEFDDLQGVMGRYYALNDGEDPAVADALLEQYLPRFAGDAIPASA 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 ++LAD+LDTL+ ++I ++PSGS+DP+ALRRA+LGI+RII+E IDI L I Sbjct: 448 TGAALALADRLDTLVGIFSIGQQPSGSRDPFALRRASLGILRIIIERNIDIDLKVAIAAA 507 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ + +RLK + D +I ++ ++ E N L I +K + Sbjct: 508 AQQLALTEVLDGNLEQVLTYVTERLKSWYRDENITPEVFASVAAMELSNPLDINARVKAV 567 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +EF + + + KR+ ILA + ++ ++ AE +L A I Sbjct: 568 DEFSRAVEAVALASANKRVLNILAKQ--GETKVEAKVDSTLFEDPAEIQLAAEIERLRLL 625 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 I ++ + Y + L ++ EP++ FFD VLV D+ EVR NRL+LL ++ + L V + Sbjct: 626 IAPLVEERNYMGVLAALATLREPVDTFFDGVLVMADNPEVRANRLALLHSLRQLFLNVAD 685 Query: 698 VQKIV 702 + +V Sbjct: 686 ISHLV 690 >gi|327478621|gb|AEA81931.1| glycyl-tRNA synthetase subunit beta [Pseudomonas stutzeri DSM 4166] Length = 684 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 210/725 (28%), Positives = 345/725 (47%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + K AE + LK+ G+ + + Y P RL + ++ Sbjct: 1 MSALDFLVELGTEELPPKALAKLAEAFCAGIEKGLKDAGLGFAKAQAYAAPRRLAVLVEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF R G+ +I + K Sbjct: 61 LATQQPDRSINLDGPPMQAAFDAHGEPTQAALGFARKCGV---DLAEIDRSGPKLKF--- 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L IV ++ +P PK MRW+ ++RP + ++ + Sbjct: 115 SRTIEGQPATQLLPGIVEASLNDLPIPKRMRWAARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E++ID ++ G + GHRFH+P + + Y+ DL A V+ D RR I Sbjct: 165 GEQVIDCEILAQRAGRESRGHRFHSPGQVHISKPSSYLEDLRGAHVIADFAERRELIAKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LAS + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VEQLASEQNGSAIVPPALLDEVTALVEWPVPLVCSFEQRFLEVPQEALISTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDANGKLLPRFITVANIESKD-PAQIVSGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL++ RL +VVF A++GT ++ R+ L IA+ D A Sbjct: 334 ----------KQPLERFNDRLK--NVVFQAQLGTVYDKAERVSRLAGLIAERTGGDKARA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSKADL TE+V EFPE+QG G YA+ + E A+ E PRG +P+ Sbjct: 382 MRAGLLSKADLATEMVGEFPEMQGIAGYYYALNEGEPEDVALALNEQYMPRGAGGELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + + Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLNLVEAVNF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F DRL+ D + ++ + + L ++ Sbjct: 502 AIGQFGTQVKSAGLADQVLEFIFDRLRARYEDEGVDVAAYLSVRAVQPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + E + KR+ +LA E K + + P++ E LY+ + Sbjct: 562 VQAFRTLPEAEALAAANKRVSNLLAKFEAK---LPEAVEPRWFDNATEFSLYSALQQAEQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + + L + P++ FF+ VLVN +D VR NR +LL ++ + L V Sbjct: 619 AVQPLAAARQYREALERLAHLRGPVDAFFEAVLVNAEDASVRANRYALLARLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISAL 683 >gi|226327616|ref|ZP_03803134.1| hypothetical protein PROPEN_01487 [Proteus penneri ATCC 35198] gi|225204142|gb|EEG86496.1| hypothetical protein PROPEN_01487 [Proteus penneri ATCC 35198] Length = 690 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 191/720 (26%), Positives = 334/720 (46%), Gaps = 60/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + ++ + P RL + + ++ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDNANITHGDVSWFAAPRRLAIKVANMAKS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ KG+ Sbjct: 65 QADRTIEKRGPAIAQAFDAEGKPTKAAEGWARGNGITVDQAERL--STDKGEWLFYRAEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L +V A+ K+P PK MRW + ++RP+ ++ +L + + Sbjct: 123 KGEAVNQLLIGMVSTALSKLPIPKLMRWGDKETH-----FVRPVHTVTLLL-----GDTV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 ID ++ I + GHRF + + D Y L V+ D E R++ IL+DA Sbjct: 173 IDGEILGIQSDRVIRGHRFMGEAEFTIDNADQYPEILYERGKVIADYETRKSIILHDARL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAEKLGGIADLSDSLVEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 KQGGLLPNFIFVTNIESSD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F +GT ++ RI+ L IA + DV RA Sbjct: 339 -------KQRLEDNLPRLET--VLFQKDLGTLRDKTDRIQALAGFIAGKMGTDVNKATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A++E +PR + +P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVAVALKEQYQPRFAGDELPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++A+K+DTL + I + P G KDP+ALRRA+LG++RII+E + + + + ++ Sbjct: 450 SALAIAEKMDTLAGIFGIGQHPKGDKDPFALRRASLGVLRIIVEQDLPLDIEELTQEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L +K + Sbjct: 510 LYGEKLTNKNVVSDVVEFMLGRFRSWYQELGYSIDTIQAVLARRPTQPADFNARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA N +++ + L E +L A +S + Sbjct: 570 FRTLEEAAALAEANKRVSNILAKS--ANVKLNDTVLASVLKAPEEVQLAANLSVLQDKLA 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++Y + L S+ + + FFD+V+V +D VR NRL++L ++ + L V ++ Sbjct: 628 PLFAERKYQEALVELASLRDVVNNFFDKVMVMDEDEAVRINRLTMLSQLRELFLKVADIS 687 >gi|157959836|ref|YP_001499870.1| glycyl-tRNA synthetase subunit beta [Shewanella pealeana ATCC 700345] gi|189082275|sp|A8GYE8|SYGB_SHEPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157844836|gb|ABV85335.1| glycyl-tRNA synthetase, beta subunit [Shewanella pealeana ATCC 700345] Length = 689 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 219/722 (30%), Positives = 349/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K AE L + + +++ + P RL + + L+ Sbjct: 5 NLLIEIGTEELPPKSLRKLAESFLANFTEELTKAELSFESAVWHAAPRRLAICINQLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L R Sbjct: 65 QADKVVEKRGPAVAQAFDADGNPTKAAMGWARGNGITVEQAERLKTD--KGEWLLHQARV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + ++ K+P PK MRW + + +IRP+ ++ +L +E + Sbjct: 123 VGVETKSLIADMAQRSLDKLPIPKPMRWGS-----NTTQFIRPVHTVTMLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 +D +L I I GHRF K+ D+Y+ L+E VL D E R+ I DA Sbjct: 173 VDGELLGIKSDRIIRGHRFMGESSFKLDHADNYLVALKEKGKVLADYEARKAIIKTDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGVADLEDDLLEEVTSLVEWPVVLTASFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F++ D+ + Sbjct: 293 NAGQLLPNFIFVTNIESKD-PQQIIAGNEKVVRPRLADAEFFFETDKKD----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ VVF ++GT +RV RI + IA IDA+ RA Sbjct: 341 ---------TLEARLTSLET--VVFQKQLGTIKQRVERISAMAGYIATSIDANSEEAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A+ E KP+ + VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVAVALSEQYKPKFSGDTVPTAPIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 I V+LA+KLDTL+ + I + P G+ DP+ALRRA +G++RI LEN + + L I Sbjct: 450 ICVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRICLENNLPLDLVDLIAKAQE 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ FF R + + D+ + D+I A+L IK + Sbjct: 510 LHGENLTNADVAEQVLEFFMARFRAWYQDQGVSVDVILAVLARRPTAPADFESRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K E+ I + L+ AEK L +++ + Sbjct: 570 FRTLEQASALAAANKRVSNILA---KVEGELPAAIDDKLLVEAAEKALAEKLAELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ E ++ FF+ V+V DD +++NRL+LL ++ L ++ Sbjct: 627 PLFAAANYQEALALLASLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFLHAADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|192289649|ref|YP_001990254.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris TIE-1] gi|192283398|gb|ACE99778.1| glycyl-tRNA synthetase, beta subunit [Rhodopseudomonas palustris TIE-1] Length = 760 Score = 608 bits (1567), Expect = e-171, Method: Composition-based stats. Identities = 299/780 (38%), Positives = 414/780 (53%), Gaps = 101/780 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQGKAADDLKRLVTDKLVAEGLVYEGAKAFATPRRLTLTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + +I++DPKKGD Y+A++ KP + Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEAKIQRDPKKGDFYVALIEKPGKPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ +PV ++ PWPKSMRW + A W+RPL SI+ E + ++ ++ Sbjct: 121 IDVIAEFLPVIVRTFPWPKSMRWGARSARPGALQWVRPLHSIIATFGMETEEPDVVHFNV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP V+ + Y L A V+LD R++ IL DA LA A Sbjct: 181 DGIEAGQTTRGHRFMAPDAFSVRRFEDYEAKLFAAKVVLDSARRKDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE-GVL 299 ELVED+ LL+E+ GLVEW MGSFDK +L +P+E+IR TI+ NQKCFV G L Sbjct: 241 YELVEDQGLLDEVSGLVEWPVALMGSFDKDFLSIPDEVIRATIRANQKCFVVADPSTGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL +NI+ASDGGAAI GN RV+ ARL DA F++ D Sbjct: 301 ANKFILTANIEASDGGAAITAGNERVIRARLSDAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + D +VFH K+GTQ R+ RI+ L KIA L+ ADV RA L K Sbjct: 342 -LKTKLEDRLPKFDQ--IVFHEKLGTQAVRIKRIQSLAAKIAPLVGADVEKTKRAAKLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDESVAAACEEHYKPQGPADRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++LEN + + L + Q + FH Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLENGLCLNLMPVVRPQASLFVFH 518 Query: 540 DRLKL--------------------------------------------YLHDRDIRHDL 555 + +K + D + +L Sbjct: 519 EWMKSENVQKIMALANEEGLTEEIFPIISASYEKKLGAFRQWNSQTESEVIRDPEKHAEL 578 Query: 556 IEAILRPENDNLLTIVDLIKH-----------LNEFFSSAKGEKFLLSAKRI-------- 596 + + D L D +K ++ F+ + L+ +R+ Sbjct: 579 RKLVSSRCYDLLSFFADRLKVQLRDQGARHDLVDAVFALEGQDDILMIVRRVEALAAFLA 638 Query: 597 --------------FQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 IL IEEKK+ R + EK L A I + Sbjct: 639 TDDGKNLLAGTKRAANILRIEEKKDGRAYDGAPDASLYAQDEEKALAAAIDRAKADAVAA 698 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + + ++ FFD+V VN DD+ VR+NRL LL I+ V + KI Sbjct: 699 VAKEDFAAAMTAMAGLRPAVDAFFDKVTVNADDKAVRENRLKLLNEIRAATRAVADFSKI 758 >gi|146280406|ref|YP_001170559.1| glycyl-tRNA synthetase subunit beta [Pseudomonas stutzeri A1501] gi|166227921|sp|A4VFG6|SYGB_PSEU5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145568611|gb|ABP77717.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Pseudomonas stutzeri A1501] Length = 684 Score = 608 bits (1567), Expect = e-171, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 345/725 (47%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + K A+ + LK+ G+ + + Y P RL + ++ Sbjct: 1 MSALDFLVELGTEELPPKALAKLADAFCAGIEKGLKDAGLGFAKAQAYAAPRRLAVLVEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF R G+ +I + K Sbjct: 61 LATQQPDRSINLDGPPMQAAFDAHGEPTQAALGFARKCGV---DLAEIDRSGPKLKF--- 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L IV ++ +P PK MRW+ ++RP + ++ + Sbjct: 115 SRTIEGQPATQLLPGIVEASLNDLPIPKRMRWAARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E++ID ++ G + GHRFH+P + + Y+ DL A V+ D RR I Sbjct: 165 GEQVIDCEILAQRAGRESRGHRFHSPGQVHISKPSSYLEDLRGAHVIADFAERRELIAKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LAS + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VEQLASEQNGSAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALISTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDTNGKLLPRFITVANIESKD-PAQIVSGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL++ RL +VVF A++GT ++ R+ L IA+ D A Sbjct: 334 ----------KQPLERFNDRLK--NVVFQAQLGTVFDKAERVSRLAGLIAERTGGDKARA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSKADL TE+V EFPE+QG G YA+ + E A+ E PRG +P+ Sbjct: 382 MRAGLLSKADLATEMVGEFPEMQGIAGYYYALNEGEPEDVALALNEQYMPRGAGGELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + + Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLNLVEAVNF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F DRL+ D + ++ + + L ++ Sbjct: 502 AIGQFGTQVKSAGLADQVLEFIFDRLRARYEDEGVDVAAYLSVRAVQPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + E + KR+ +LA E K + + P++ E LY+ + Sbjct: 562 VQAFRTLPEAEALAAANKRVSNLLAKFEAK---LPEAVEPRWFDNATEFSLYSALQQAEQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + + L + P++ FF+ VLVN +D VR NR +LL ++ + L V Sbjct: 619 AVQPLAAARQYREALERLAHLRGPVDAFFEAVLVNAEDASVRANRYALLARLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISAL 683 >gi|197286684|ref|YP_002152556.1| glycyl-tRNA synthetase subunit beta [Proteus mirabilis HI4320] gi|238693195|sp|B4EZ95|SYGB_PROMH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|194684171|emb|CAR45626.1| glycyl-tRNA synthetase beta subunit [Proteus mirabilis HI4320] Length = 690 Score = 607 bits (1566), Expect = e-171, Method: Composition-based stats. Identities = 193/720 (26%), Positives = 338/720 (46%), Gaps = 60/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + ++ + P RL + + ++ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFATHFTAELDNANITHGDVSWFAAPRRLAIKVANMAKS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++I E+ GP + G KA +G+ R G+ ++ KG+ Sbjct: 65 QADRIVEKRGPAIAQAFDAEGKPTKAAEGWARGNGITVDQAERL--STDKGEWLFYRAEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L +V A+ K+P PK MRW + ++RP+ ++ +L + + Sbjct: 123 KGEAVNQLLAGMVSNALAKLPIPKLMRWGDKETH-----FVRPVHTVTLLL-----GDTL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 ID ++ + I GHRF + + D Y L V+ D E R++ IL+DA Sbjct: 173 IDGEILGVQSARIIRGHRFMGEAEFTIDNADQYPEILYERGKVIADYENRKSIILHDARL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAEKLGGVADLSDSLVEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 KQGALLPHFIFVSNIESSD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F +G+ ++ RI+ L IA+ + ADV RA Sbjct: 339 -------KQRLEDNLPRLET--VLFQKNLGSLRDKTDRIQALAGFIAEKMGADVNKATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A++E +PR + +P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALKEQYQPRFAGDALPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++A+K+DTL + I + P G KDP+ALRRA LG++RII+E + + + + ++ Sbjct: 450 SAVAIAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEQDLPLDIEELTQEAAR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L +K + Sbjct: 510 LYGDKLTNQNVVSDVVEFMLGRFRAWYQELGYSIDTIQAVLARRPTQPADFNARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA + +++ ++ L E +L A +S + Sbjct: 570 FRTLEEAAALAEANKRVSNILAKS--ADVKLNDKVLASVLKAPEEVQLAANLSVLQDKLA 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++Y + L S+ + + FFD+V+V D E+R NRL++L ++ + L V ++ Sbjct: 628 PLFAERKYQEALVELASLRDVVNNFFDKVMVMDKDEEIRVNRLTMLHELRELFLKVADIS 687 >gi|147677235|ref|YP_001211450.1| glycyl-tRNA synthetase, beta subunit [Pelotomaculum thermopropionicum SI] gi|146273332|dbj|BAF59081.1| glycyl-tRNA synthetase, beta subunit [Pelotomaculum thermopropionicum SI] Length = 698 Score = 607 bits (1566), Expect = e-171, Method: Composition-based stats. Identities = 215/735 (29%), Positives = 342/735 (46%), Gaps = 74/735 (10%) Query: 1 MP----DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYL 56 M D+LLEI EE+PAR A +L I + L E+ + + + + TP RL LY+ Sbjct: 1 MSARARDYLLEIGVEELPARFLDPALAELKEISVRALAEKRLSCKKVETFGTPRRLALYV 60 Query: 57 KGLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY 109 +GL+ H E GP V G +A +GF RS G+ ++K + Sbjct: 61 EGLAEHQEPLETEVKGPAVKVAFKPDGTPTRAAEGFARSQGVAVS--GLVRKFVGHVEYV 118 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 AV R+ R +VL I P I + +PK MRW + RP++ I+ + Sbjct: 119 FAVKREEGRPAREVLSEIAPALIDGLHFPKPMRWGNLE-----VRFARPIRWIVSLF--- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +++++ + + G T GHRF + P+ + Y + V++D RR I Sbjct: 171 --GDEVVEFEYAGLKAGRTTCGHRFLSKEPVVLAFSSEYFEKMRSNYVIVDTAERRQLIR 228 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA++ G ED+DLL E+ LVE+ +G F YL LP E++ ++ +Q+ Sbjct: 229 RQVQELAASAGGRAEEDEDLLNEVSNLVEYPTALVGEFSPDYLNLPREVLVTPMREHQRY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + +G L FI V N D I G +V+ ARL DA F++ D Sbjct: 289 FPVVSPDGGLLPKFIAVKNGAP-DHLDIIRSGYEKVLRARLADANFFFQED--------- 338 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--- 406 L PL ++ L V+F +GT ++V R+ L +A ++ A Sbjct: 339 -----------LKTPLAGKVPALK--KVIFQESLGTVYDKVERLGALAGYLAGVMGAGRQ 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + + RA L+KADL T +V EFPELQG +G+EYA+ E+ +A+ EH PR + Sbjct: 386 EKEVALRAAYLAKADLVTSMVYEFPELQGIMGREYALRSGESREVAEAVFEHYLPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P +S+ADK+D ++ +AI +PSGS+DPYALRR LGI IILE + + L Sbjct: 446 RLPETLPGKILSIADKIDNIVGCFAIGIQPSGSQDPYALRRQALGISHIILEGQAALSLR 505 Query: 527 QFIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + +E ++ FF RL+ L R +D +EA+L D+ Sbjct: 506 ELVETAYRGYEGKVELKCSLEKVTADVGEFFEQRLRSILGARGFSYDTVEAVLASGCDDF 565 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + L F L R + +++P L +EK L Sbjct: 566 ADTLLRAQALAGFRRDPAFGDLLTVFVRANNLARNA------FPGQVNPALLEDASEKEL 619 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 ++ + ++ K Y + + ++ +P+E FF+ V+V V+DREVR+NRL+LL Sbjct: 620 NRRLAGVQEEAKRHLEKKDYRSLLAGIATLQKPLEEFFNSVMVMVEDREVRENRLTLLAN 679 Query: 688 IKNIILIVINVQKIV 702 + ++ V ++ KIV Sbjct: 680 LAGLVRQVADLSKIV 694 >gi|240139847|ref|YP_002964324.1| glycine tRNA synthetase, beta subunit [Methylobacterium extorquens AM1] gi|240009821|gb|ACS41047.1| glycine tRNA synthetase, beta subunit [Methylobacterium extorquens AM1] Length = 696 Score = 607 bits (1566), Expect = e-171, Method: Composition-based stats. Identities = 310/691 (44%), Positives = 414/691 (59%), Gaps = 37/691 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+S GL ++ DPKKG+ YLAV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKSAGLASLDQATTVTDPKKGEFYLAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL+SI+ E +++ + Sbjct: 121 LDVLAEILPGIIKSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPEVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 +I G +T GHRF AP P +V+ D Y++ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DDITAGTVTSGHRFLAPEPFEVRRFDDYVQALERADVILDADRRKDIILHDAKDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 L+LVED LLEE+ GLVE V MGSF++++L +P E IR TI+ NQKCFV R L Sbjct: 241 LDLVEDDGLLEEVAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSDEL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F+LVSN+ ASDGGAAI GN RVV ARL DA FW+ D+ Sbjct: 301 APAFVLVSNLIASDGGAAITAGNERVVRARLSDARFFWETDK------------------ 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L+ R+ +LD +VFH K+GTQGERV+RI L K+IA L+ AD AL +RA L+K Sbjct: 343 --ATKLEDRLPKLD--SIVFHEKLGTQGERVARIAALAKEIAPLVGADPALAERAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA LQ E+ S AIEEH KP GP + VPT+ +SI V+L Sbjct: 399 ADLVTEMVGEFPELQGLMGRKYAALQGEHDSVAAAIEEHYKPVGPSDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE----------NKIDIPLSQFI 529 ADKLDTL FW+I+EKP+GSKDP+ALRRA LG+IR ++E K Sbjct: 459 ADKLDTLAGFWSIDEKPTGSKDPFALRRAALGVIRAVIERSLRLSLASLLKGRFASGSDE 518 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEK 588 +L+ FF DRLK+YL D+ RHDLI+A+ P D+LL +V ++ L EF S+ G+ Sbjct: 519 RTADLLAFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLLVVRRVEALGEFLSTDDGKN 578 Query: 589 FLLSAKRIFQILAIEEKKN-REISLEISPQYLL--LEAEKRLYAVISDFGTHIQESMDHK 645 L KR IL IEEKK+ R E+ L ++ ++ + Sbjct: 579 LLAGYKRAANILRIEEKKDGRAYDEAPDAALAASGQPEERALAEALAAARQEASAAVAAE 638 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 + L + P++ FF++V VN DD Sbjct: 639 DFAGAMRALSRLRAPVDAFFEKVTVNADDPA 669 >gi|294138812|ref|YP_003554790.1| glycyl-tRNA synthetase subunit beta [Shewanella violacea DSS12] gi|293325281|dbj|BAJ00012.1| glycyl-tRNA synthetase, beta subunit [Shewanella violacea DSS12] Length = 689 Score = 607 bits (1565), Expect = e-171, Method: Composition-based stats. Identities = 216/722 (29%), Positives = 346/722 (47%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K AE LK+ + +++ + P RL L + L+ Sbjct: 5 NLLIEIGTEELPPKSLRKLAESFLSNFTDELKKAELSFESAVWHAAPRRLALSVNQLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L + Sbjct: 65 QADKVVEKRGPAVAQAFDADGNPTKAAMGWARGNGITVEEAGRLKTD--KGEWLLHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + + +IRP+ ++ + +E I Sbjct: 123 VGVETKSLISAMAQRALDKLPIPKPMRWGSNKT-----QFIRPVHTVTMLFGSE-----I 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 + +L I + GHRF ++ D+Y+ L+E VL D E R+ I DA Sbjct: 173 VAGELLGIKSDRVIRGHRFMGQASFELDHADNYLSALKEKGKVLADYEVRKTIIKTDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + +LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGIADLEDELLEEVCSLVEWPVVLTASFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI + D I+ GN +VV RL DA F++ D+ Sbjct: 293 KTGQLLPNFIFVTNIVSKD-PQVIISGNEKVVRPRLADAEFFFENDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ R+ L+ VVF ++GT +RV RI + IA IDA+ RA Sbjct: 339 -------KQTLEDRLVSLET--VVFQKQLGTIKQRVERISEMAGFIASSIDANAEDASRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A++E KP+ + VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVALALQEQYKPKFSGDTVPTASIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 I V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+RI +EN + + L I Sbjct: 450 ICVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRICVENNLPLDLVNLIAKAQE 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ FF R + + D+ + D+I A+L IK + Sbjct: 510 LHGSNLSNETTAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARRPTAPADFDSRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K +I I L AEK L +++ + Sbjct: 570 FRTLDQASALAAANKRVSNILA---KIEGDIPASIDASLLTENAEKALAEKLNELQPKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL + E ++ FF+ V+V DD +++NRL+LL ++ L ++ Sbjct: 627 PLFAAANYQEALALLADLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFLHAADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|254784294|ref|YP_003071722.1| glycyl-tRNA synthetase subunit beta [Teredinibacter turnerae T7901] gi|237687492|gb|ACR14756.1| glycyl-tRNA synthetase, beta subunit [Teredinibacter turnerae T7901] Length = 686 Score = 607 bits (1565), Expect = e-171, Method: Composition-based stats. Identities = 195/722 (27%), Positives = 344/722 (47%), Gaps = 60/722 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FL+E+ +EE+P + + + L ++ + + ++ Y TP RL + + GL+ Sbjct: 1 MH-FLVELGTEELPPTALKTLSHAFTQGIQDGLTQKNLGFDSVESYATPRRLAVSVTGLA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +P++ + GP GA KA + F R G+ + K + + Sbjct: 60 DKTPQESVKIFGPPAQVAFKDGAPTKAAEAFARKNGIALEALQT--GMDGKVEKLVYETT 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 D+L +V ++ +P K MRW + + ++RP+ ++ + A +K Sbjct: 118 AGGEATVDLLADLVAQSLANLPIAKRMRWGASRT-----EFVRPVHWLVML-----ADDK 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 ++ ++ + GN T GHRFH PI ++ + Y L E V+ R+ I+ + Sbjct: 168 VLPAEILGLTSGNETRGHRFHYNQPITLKHANQYAAALAETGHVVASFSERQAMIVKQVN 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G V D DLL+E+ LVE+ G+F+ ++L +P E + ++K +QK F Sbjct: 228 TAADKLGGTAVIDADLLDEVTALVEYPVALAGNFENEFLNVPSEALISSMKEHQKYFHVV 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI ++NI + D A ++ GN RV+ RL DA F++ D+ Sbjct: 288 DNDGELLPHFITIANIVSQD-PAQVIDGNERVIRPRLSDAKFFFETDKQ----------- 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L+ R +L VVF AK+GT ++ RI L IA + + A V R Sbjct: 336 ---------TSLEARREKLKT--VVFQAKLGTIYDKTERIGKLATLIAARLGENEATVKR 384 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L K+DL + +V EF +LQG G YA E+ A+ E P+ +++P Sbjct: 385 AAELCKSDLVSTMVYEFTDLQGIAGYHYANNDGEDAEVAQAMVEQYMPKFAGDDLPATAT 444 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 ++LAD+LDT+ + I +KP+GSKDP+ALRRA++G +R+++E K+D+ L I Sbjct: 445 GTIIALADRLDTITGIFGIGQKPTGSKDPFALRRASVGALRLMVEKKLDLDLRDLINAAA 504 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ + +R + + + I ++ A+ + N L I + + + E Sbjct: 505 DSFTALPNAQVVDDVLAYMLERFRAWYEEASIPAEVFMAVSAKQLSNPLDINNRVYAVAE 564 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F A+ + + KR+ ILA K + + E+ L AEK+L ++ + + Sbjct: 565 FSKLAEAQALAAANKRVSNILA---KLDSAPASEVDAALLTDGAEKQLADALASYAAQAR 621 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y +L + ++ FFD V+V DD VR+NRL+LLQ ++++ L V ++ Sbjct: 622 PLLAEANYTDALKVLAGLRATVDTFFDDVMVMTDDMAVRNNRLALLQSLRDLFLEVADIS 681 Query: 700 KI 701 + Sbjct: 682 LL 683 >gi|227355124|ref|ZP_03839535.1| glycyl-tRNA synthetase beta subunit [Proteus mirabilis ATCC 29906] gi|227164911|gb|EEI49758.1| glycyl-tRNA synthetase beta subunit [Proteus mirabilis ATCC 29906] Length = 690 Score = 607 bits (1565), Expect = e-171, Method: Composition-based stats. Identities = 193/720 (26%), Positives = 338/720 (46%), Gaps = 60/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + ++ + P RL + + ++ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFATHFTAELDNANITHGDVSWFAAPRRLAIKVANMAKS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++I E+ GP + G KA +G+ R G+ ++ KG+ Sbjct: 65 QADRIVEKRGPAIAQAFDAEGKPTKAAEGWARGNGITVDQAERL--STDKGEWLFYRAEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L +V A+ K+P PK MRW + ++RP+ ++ +L + + Sbjct: 123 KGEAVNQLLAGMVSNALAKLPIPKLMRWGDKETH-----FVRPVHTVTLLL-----GDTL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 ID ++ + I GHRF + + D Y L V+ D E R++ IL+DA Sbjct: 173 IDGEILGVQSDRIIRGHRFMGEAEFTIDNADQYPEILYERGKVIADYENRKSIILHDARL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAEKLGGVADLSDSLVEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 KQGALLPHFIFVSNIESSD-PQQIISGNEKVVRPRLADAEFFFKTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F +G+ ++ RI+ L IA+ + ADV RA Sbjct: 339 -------KQRLEDNLPRLET--VLFQKDLGSLRDKTDRIQALAGFIAEKMGADVNKATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A++E +PR + +P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALKEQYQPRFAGDALPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++A+K+DTL + I + P G KDP+ALRRA LG++RII+E + + + + ++ Sbjct: 450 SAVAIAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEQDLPLDIEELTQEAAR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L +K + Sbjct: 510 LYGDKLTNKNVVSDVVEFMLGRFRAWYQELGYSIDTIQAVLARRPTQPADFNARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA + +++ ++ L E +L A +S + Sbjct: 570 FRTLEEAAALAEANKRVSNILAKS--ADVKLNDKVLASVLKAPEEVQLAANLSVLQDKLA 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++Y + L S+ + + FFD+V+V D E+R NRL++L ++ + L V ++ Sbjct: 628 PLFAERKYQEALVELASLRDVVNNFFDKVMVMDKDEEIRVNRLTMLHELRELFLKVADIS 687 >gi|163751701|ref|ZP_02158920.1| glycyl-tRNA synthetase beta subunit [Shewanella benthica KT99] gi|161328440|gb|EDP99596.1| glycyl-tRNA synthetase beta subunit [Shewanella benthica KT99] Length = 689 Score = 607 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 217/722 (30%), Positives = 352/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE LK+ + +++ + TP RL + + L Sbjct: 5 NLLIEVGTEELPPKSLRKLAESFLSNFTAELKKSELSFESAVWHATPRRLAICVNQLVLA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L + Sbjct: 65 QADKVVEKRGPAVAQAFDADGNPTKAAMGWARGNGITVEEAGRLKTD--KGEWLLHQAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P+PK MRW + + +IRP+ ++ +L +E I Sbjct: 123 VGVETKSLISAMAQRALDKLPFPKPMRWGSNKT-----QFIRPVHTVTMLLGSE-----I 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 + +L I + GHRF ++ D+Y+ L+E VL D E R+ I DA Sbjct: 173 VAGELLGIKSDRVIRGHRFMGQASFELDHADNYLSALKEKGKVLADYEARKAIIKTDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + +LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKLGGIADLEDELLEEVCSLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI + D I+ GN +VV RL DA F++ D+ Sbjct: 293 QTGQLLANFIFVTNIVSKD-PQVIISGNEKVVRPRLADAEFFFENDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ R+ L+ VVF ++GT +RV RI + IA IDA+ RA Sbjct: 339 -------KQTLEDRLPSLE--SVVFQKQLGTIKQRVERISAMAGFIASSIDANAEEASRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A++E KP+ + VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVALALQEQYKPKFSGDTVPTAAIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 + V+LA+KLDTL+ + I P G+ DP+ALRRA +GI+RI +EN + + L I Sbjct: 450 VCVALAEKLDTLVGIFGIGLAPKGAADPFALRRAAIGILRICVENNLPLDLVDLIAKAQA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ FF R + + D+ + D+I A+L + IK + Sbjct: 510 LHGSNLSNDTTAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARHPTSPADFDSRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K +I I L AEK L +++ + Sbjct: 570 FRTLEQALALAAANKRVSNILA---KVKGDIPASIDASLLTETAEKALAQKLNELQPKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL + E +++FF++V+V VDD +++NRL+LL ++ L V ++ Sbjct: 627 PLFASANYQEALALLADLRESVDVFFEEVMVMVDDEALKNNRLALLSSLREQFLHVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|126668181|ref|ZP_01739142.1| Glycyl-tRNA synthetase, beta subunit [Marinobacter sp. ELB17] gi|126627330|gb|EAZ97966.1| Glycyl-tRNA synthetase, beta subunit [Marinobacter sp. ELB17] Length = 694 Score = 607 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 190/701 (27%), Positives = 333/701 (47%), Gaps = 61/701 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + ++ + ++ L+ G+ + + + P RL L ++ Sbjct: 3 MATQDFLVELGTEELPPKALKQLSDAFTQGIVSGLQAAGIEFGAVEPFAAPRRLALRIRD 62 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P+K E+ GP V G +A+ GF S G+ ++ D KG + Sbjct: 63 LAHAQPDKPVEKRGPAVKTAFDDAGNPTRALTGFATSLGVTPDELDTLETD--KGAWLVF 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + R +++ ++ ++ +P PK MRW + ++RP+ ++ + + Sbjct: 121 RTVEQGRTTAELMPELIEQSLAALPIPKRMRWGAHRT-----EFVRPVHWLVMLYGS--- 172 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +ID + + GN T GHRFH P + + + Y L + VL D RR I Sbjct: 173 --TVIDHPIMGLKPGNKTRGHRFHCPKSLIIPTPADYEVVLRQEGYVLADFAQRREQIRK 230 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + LA V D+ LL+E+ L EW MG F++++L +P E + ++K +QK F Sbjct: 231 GVNALALQQNCVAVIDEALLDEVTALNEWPVPLMGRFEERFLQVPAEALISSMKEHQKYF 290 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G + FI V+N+++ D + ++ GN +V+ RL DA F++ D+ Sbjct: 291 HLVDDNGQMQPFFITVANLESKD-PSQVIAGNEKVIRPRLSDAAFFYETDR--------- 340 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K LDQR+ RL +VF K+G+ ++ R+ L KIAQ I +D AL Sbjct: 341 -----------KKRLDQRIDRLKP--IVFQDKLGSVYDKSVRVAALAGKIAQAIGSDPAL 387 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +RA +L+K DL TE+V EF +LQG +G+ YA E+ A+ E PR +N+PT Sbjct: 388 AERAAMLAKTDLVTEMVLEFTDLQGIMGQYYATNDGEHADVASALNEQYMPRFAKDNLPT 447 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 V++AD+LD+L+ + IN+ PSG++DP+ALRRA LG++RII+E ++ + L + Sbjct: 448 TLTGCAVAIADRLDSLVGLFGINQPPSGTRDPFALRRAALGVLRIIIERQLPLDLQTCCD 507 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++ + +R + Y ++ I ++ A+ L +K Sbjct: 508 WAAQQFTDLPAENPATSVVDYMLERFRAYYDEQGISAEVYLAVHARRPTRPLDFDRRVKA 567 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + KR+ ILA + + + + L AE L + Sbjct: 568 VEAFRQLPEAGALAAANKRVSNILAKQ--SDSTVHDTVDASLLQDAAELALAEQVEHQTD 625 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 + + Y L + +P++ +FD+V+V DD V Sbjct: 626 TVLPLFEKGDYTAALHSLADLHQPVDRYFDEVMVMADDEAV 666 >gi|238798356|ref|ZP_04641839.1| Glycyl-tRNA synthetase beta subunit [Yersinia mollaretii ATCC 43969] gi|238717814|gb|EEQ09647.1| Glycyl-tRNA synthetase beta subunit [Yersinia mollaretii ATCC 43969] Length = 682 Score = 607 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 201/718 (27%), Positives = 324/718 (45%), Gaps = 61/718 (8%) Query: 7 EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK 66 EI +EE+P + AE + L + + + Y P RL + + LS ++ Sbjct: 2 EIGTEELPPKALRSLAESFAANFTAELDNANLPHGEVVWYAAPRRLAVKVAHLSAAQADR 61 Query: 67 IEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 62 EVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHVKGES 119 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E +I Sbjct: 120 AQLLLAGMVNAALSKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSE-----LISGT 169 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASA 238 + I I GHRF + + D Y + L E V+ D E R+ I DA A Sbjct: 170 VLGIDSDRIIRGHRFMGEAEFALDNADQYPQLLLERGKVIADYELRKTIIKRDAELAAQK 229 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F G Sbjct: 230 MGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDTAGH 289 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 290 LLPNFIFVTNIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR----------------- 331 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA +LS Sbjct: 332 ---KKRLEDNLPRLE--SVLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRAGLLS 386 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ ++ Sbjct: 387 KCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALA 446 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 +ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 447 IADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRLYGS 506 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 +I F R + + D D I+A+L +K + F + Sbjct: 507 KLTNTKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTYFRTL 566 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + KR+ ILA K ++ + L AE +L + ++ Sbjct: 567 DAAATLAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLEPVFA 623 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +Y + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L V ++ + Sbjct: 624 AGQYQEALVELAALRETVDEFFDSVMVMAEDDAVRVNRLTLLSKLRELFLQVADISLL 681 >gi|218531348|ref|YP_002422164.1| glycyl-tRNA synthetase subunit beta [Methylobacterium chloromethanicum CM4] gi|254781856|sp|B7KUK7|SYGB_METC4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218523651|gb|ACK84236.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium chloromethanicum CM4] Length = 696 Score = 607 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 309/691 (44%), Positives = 419/691 (60%), Gaps = 37/691 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+S GL ++ DPKKG+ YLAV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKSAGLASLDQATTVTDPKKGEFYLAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL+SI+ E +++ + Sbjct: 121 LDVLAEILPGIIKSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPEVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP P +V+ D Y++ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DGITAGMVTSGHRFLAPEPFEVRRFDDYVQALERADVILDADRRKDIILHDAKDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 L+LVED+ LLEE+ GLVE V MGSF++++L +P E IR TI+ NQKCFV R L Sbjct: 241 LDLVEDEGLLEEVAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSDEL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F+LVSN+ ASDGGAAI GN RVV ARL DA FW+ D+ Sbjct: 301 APAFVLVSNLIASDGGAAITAGNERVVRARLSDARFFWETDK------------------ 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L+ R+ +LD +VFH K+GTQGERV+RI L +IA L+ AD AL +RA L+K Sbjct: 343 --ATKLEDRLPKLD--SIVFHEKLGTQGERVARIAALAAEIAPLVAADPALAERAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA LQ E+ S AIEEH KP GP + VPT+ +SI V+L Sbjct: 399 ADLVTEMVGEFPELQGLMGRKYAALQGEHDSVAAAIEEHYKPVGPSDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------- 532 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR ++E + + L+ ++ + Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRAVIERSLRLSLASLLKGRFVSGSDE 518 Query: 533 ---NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEK 588 +L+ FF DRLK+YL D+ RHDLI+A+ P D+LL +V ++ L F ++ G+ Sbjct: 519 RTADLLAFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLMVVRRVEALGAFLATDDGKN 578 Query: 589 FLLSAKRIFQILAIEEKKN-REISLEISPQYLL--LEAEKRLYAVISDFGTHIQESMDHK 645 L KR IL IEEKK+ R E+ L ++ ++ + Sbjct: 579 LLAGYKRAANILRIEEKKDGRAYDEAPDAALAASGQPEERALAEALAAARQEASAAVAAE 638 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 + L + P++ FF++V VN DD Sbjct: 639 DFAGAMRALSRLRAPVDAFFEKVTVNADDPA 669 >gi|84516922|ref|ZP_01004280.1| glycyl-tRNA synthetase beta subunit [Loktanella vestfoldensis SKA53] gi|84509390|gb|EAQ05849.1| glycyl-tRNA synthetase beta subunit [Loktanella vestfoldensis SKA53] Length = 724 Score = 607 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 274/746 (36%), Positives = 399/746 (53%), Gaps = 69/746 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L E G+ Y + TP RL L + GL+ Sbjct: 1 MPDLLIELFSEEIPARMQARAADDLRKLVTDGLVEAGLTYAGAAAFATPRRLTLAIDGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTIS-------------------DCQIKK 101 S EE+ GP + A +A+ G+L+ G++ D + Sbjct: 61 AESTIFREEKKGPPIDANPRALKGYLQGLGMEAPDKWYDEQIEALKAGEVISFGDSFVTT 120 Query: 102 DPKKGD-VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLK 160 KG V +AVL P R D++ ++ ++ PWPKSMRW A W+RPL+ Sbjct: 121 QELKGKRVLMAVLEYPPRKAADIIAEVLDATVRNFPWPKSMRWG-----TGALKWVRPLQ 175 Query: 161 SILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLD 220 SI+C+L E A +++ L + I G T GHRF +P V D Y L+ A V+L Sbjct: 176 SIICLLSDE-AGAEVVPLTIDAITAGRSTRGHRFLSPDAFTVNGFDDYEAKLKRAHVILR 234 Query: 221 PECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIR 280 + R I NDA + A A GLELVED+ LL E+ GLVEW V +G D +L LP E+++ Sbjct: 235 ADERAEVIWNDATQQAFASGLELVEDRGLLAEVAGLVEWPVVLLGRIDDAFLGLPPEVLQ 294 Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 ++K +QK F R + F+ V+N+ +D GA I+ GN +V+AARL DA FW+ D Sbjct: 295 TSMKEHQKFFSVRNPKTGRIERFVTVANMATADHGATILAGNQKVLAARLSDAKFFWEND 354 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + A + +V FH K+G+Q +R++RI L ++I Sbjct: 355 LRTVKADGLEGMGA------------------GLANVTFHNKLGSQADRIARIAALAREI 396 Query: 401 AQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 A + AD L ++A +++KADL +E+V EFPELQG +G+ YA N + A ++H Sbjct: 397 APHVGADPDLAEQAAIVAKADLQSEMVGEFPELQGLMGRYYATAAGLNPAVAAACQDHYS 456 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P GP + VPT +S+ V+LADK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN Sbjct: 457 PLGPSDAVPTAPVSVAVALADKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENG 516 Query: 521 IDIPLSQFI-----------------------EDQNLILFFHDRLKLYLHDRDIRHDLIE 557 I L +L+ FFHDRLK+YL D+ IRHD+I+ Sbjct: 517 ARINLRDIRVSAEMRIPDEFKSGETVPDDAGANYDSLLAFFHDRLKVYLKDQGIRHDIID 576 Query: 558 AILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEIS 615 A + P ND+L +V + L + ++ GE + KR IL E K+ E S Sbjct: 577 ACIAMPNNDDLTLLVKRARALADVLATDDGENLIQGFKRANNILTQAEAKDGVEYSYGAD 636 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 ++ AEK L+A + I +M + + + ++ PI+ FF V VN D + Sbjct: 637 LKFAEDGAEKALFAALDAADAKIAPAMKDEDFSTAMTAMAALRGPIDAFFTAVQVNDDRQ 696 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKI 701 +R NRL+LL I+ I L V ++ KI Sbjct: 697 VIRRNRLNLLSRIRKICLSVADLTKI 722 >gi|170747570|ref|YP_001753830.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium radiotolerans JCM 2831] gi|238688771|sp|B1M1W2|SYGB_METRJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|170654092|gb|ACB23147.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium radiotolerans JCM 2831] Length = 699 Score = 607 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 305/697 (43%), Positives = 410/697 (58%), Gaps = 40/697 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L G +Y+ R + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVARGFLYEGARAFSTPRRLALHIAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+ GL ++ DPKKG+ YLAV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKGAGLASLDQATTVTDPKKGEFYLAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL +P ++ PWPKSMRW + + W+RPL+SI+ E ++I + + Sbjct: 121 LDVLAEFLPEIVRSFPWPKSMRWGAASAEPGSLRWVRPLQSIVATFGPETETPEVIPVSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +TYGHRF AP I+V+ D YI+ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 GGIAAGTVTYGHRFLAPEAIEVRRFDDYIQALERAKVVLDADRRKDVILHDARDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 L+LVED+ LLEE+ GLVEW V MGSFD+ +L +P E IR TI+ NQKCFV R L Sbjct: 241 LDLVEDEGLLEEVSGLVEWPVVLMGSFDESFLDIPAEAIRATIRANQKCFVLRKGGSEDL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FILVSN+ A+DGG AI GN RVV ARL DA FW+ D+ Sbjct: 301 APAFILVSNLVATDGGQAITAGNERVVRARLSDAKFFWETDK------------------ 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L+ R+ +LD +VFH K+GTQGER++RI L K +A + AD AL +RA L+K Sbjct: 343 --ATRLEDRLPKLD--AIVFHEKLGTQGERIARIAALAKDLAPRVGADPALAERAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA LQ E+ S C AIEEH KP GP + VPT+ +SI V+L Sbjct: 399 ADLVTEMVGEFPELQGLMGRKYAALQGEHDSVCAAIEEHYKPLGPSDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGII-------------RIILENKIDIPLS 526 ADKLDTL FWAI+EKP+GSKDP+ALRRA LG+I + + Sbjct: 459 ADKLDTLAGFWAIDEKPTGSKDPFALRRAALGVIRLILDRGLRLRLLEQVGAADRSLAGR 518 Query: 527 QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAK 585 + ++L+ FF DRLK+YL D+ RHDLI+A+ P D+LL +V ++ L F + Sbjct: 519 AGADARDLLGFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLMVVRRVEALAAFLDTED 578 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE---KRLYAVISDFGTHIQESM 642 G+ L KR IL IEEKK+ L E + L ++ ++ Sbjct: 579 GKNLLAGYKRAANILRIEEKKDGRAYDAAPDAALAAAGEPAERALAEALAKARETASAAV 638 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + + L ++ P++ FF V VN D ++R+ Sbjct: 639 AREDFSGAMQALSTLRAPVDAFFQDVTVNAPDPKLRE 675 >gi|114561194|ref|YP_748707.1| glycyl-tRNA synthetase subunit beta [Shewanella frigidimarina NCIMB 400] gi|122301220|sp|Q08A46|SYGB_SHEFN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|114332487|gb|ABI69869.1| Glycine--tRNA ligase [Shewanella frigidimarina NCIMB 400] Length = 694 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 213/727 (29%), Positives = 341/727 (46%), Gaps = 66/727 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + AE L + + +++ Y P RL + + GL+ Sbjct: 5 NLLIEVGTEELPPKALRTLAESFLTSFTDELTKADLPFESAVWYAAPRRLAINVLGLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDADGNPTKAAQGWARGNGITVEQAERLVTD--KGEWLVHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ ++ +L +E + Sbjct: 123 VGVETKSLIADMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTVTMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + +L I I GHRF ++ D+Y+ L+E VL D E R++ I DA Sbjct: 173 VAGELLGITSNRIIRGHRFMGKASFELDHADNYLAALKEQGKVLADYELRKSLIKADAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKLGGIADIQDGLLEEVASLVEWPIVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++ D I+ GN +VV RL DA F+ D+ N Sbjct: 293 KAGKLLPNFIFVTNIESKD-PQQIISGNEKVVRPRLADAEFFFNTDKKN----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-----ADVA 409 L+ R+A L+ VVF ++GT RV RI L IA ++ + Sbjct: 341 ---------TLESRIASLET--VVFQKQLGTLKARVERISELAGFIATQMNNNGVETNSV 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP Sbjct: 390 DASRAGLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAIALEEQYKPKFSGDTVP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 T +S V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+R+I+ENK+ + L + I Sbjct: 450 TATVSCAVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRVIVENKLPLDLVELI 509 Query: 530 ED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +++ F R + + D+ I+ D+I A+L + Sbjct: 510 AKAQALHATNITNTNTSDDVLEFLLARFRAWYQDKGIQVDVILAVLARRPTKPADFDSRV 569 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K ++ F + KR+ ILA K E+ I+ L AEK L + Sbjct: 570 KAVSHFRGLEASTALAAANKRVSNILA---KVEGELPATINSALLTEPAEKALADKLVQL 626 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L Sbjct: 627 QPQLAPLFADGNYQQALTLLADLRENVDQFFEDVMVMADDEALKNNRLALLTNLREQFLH 686 Query: 695 VINVQKI 701 V ++ + Sbjct: 687 VADISLL 693 >gi|120552981|ref|YP_957332.1| glycyl-tRNA synthetase subunit beta [Marinobacter aquaeolei VT8] gi|166227917|sp|A1TWM6|SYGB_MARAV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120322830|gb|ABM17145.1| glycyl-tRNA synthetase beta chain [Marinobacter aquaeolei VT8] Length = 693 Score = 606 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 193/702 (27%), Positives = 336/702 (47%), Gaps = 62/702 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + ++ + ++ L+E GV + + + P RL + ++ Sbjct: 1 MATQDFLVELGTEELPPKALKPLSDAFTQGIVKGLEEAGVAFGAVESFAAPRRLAVRIRD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P+K E+ GP V G +A+ GF S G+ ++ D KG + Sbjct: 61 LADAQPDKSVEKRGPAVKAAFDDSGNPTRALTGFATSLGITPDQLDTMETD--KGAWLVY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +++ +V ++ +P PK MRW + ++RP+ ++ + Sbjct: 119 RTVEKGKPTVELMPDLVEKSLAALPIPKRMRWGAWKT-----EFVRPVHWLILLY----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 K+I+ + + GN T GHRFH P + V + Y L++ VL D RR I Sbjct: 169 GNKVIEAPVMNLKPGNKTRGHRFHCPKELIVPTPADYEVVLKQEGYVLADFAERREQIRA 228 Query: 231 DAHRLA-SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA G + V D+DLL+E+ L EW MG F+ ++L +P E + ++K +QK Sbjct: 229 GVAALAEKEAGGKAVIDEDLLDEVTALNEWPVPLMGRFEDRFLEVPAEALISSMKEHQKY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + FI V+N+++ D + ++ GN +V+ RL DA F++ D+ Sbjct: 289 FHVVDASDNMLPLFITVANLESKD-PSQVISGNEKVIRPRLSDAAFFYETDR-------- 339 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L+ R+ L +VF K+G+ ++ R+ L KKIA+ I++D A Sbjct: 340 ------------KTRLEDRIESLKP--IVFQDKLGSIYDKSVRVAALAKKIAEAINSDPA 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 L +RA +L+K DL TE+V EF +LQG +G+ YA E+ A+ E PR +++P Sbjct: 386 LAERAAMLAKTDLVTEMVLEFTDLQGIMGQYYAANDGEHEDVAKALNEQYMPRFAGDDLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 T V++AD++D+L+ + IN+ PSG++DP+ALRRA+LG++RII+E ++ + L Sbjct: 446 TTLTGCAVAIADRIDSLVGLFGINQPPSGTRDPFALRRASLGVLRIIIERQLPLDLQTVC 505 Query: 530 E--------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 E ++ + DR + + ++ I ++ A+ L +K Sbjct: 506 EWAEQNFTVLTENNTASTVVDYMLDRFRAHYDEQGICAEVYLAVHARRPTRPLDFDRRVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KR+ IL + I + L AEK L A + + Sbjct: 566 AVEAFRQLPEAQALAGANKRVSNILTKQ--GGDSIGETVDTALLQDAAEKTLAAKVEEQA 623 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 + + Y L S+ EP++ FFD+V+V DD V Sbjct: 624 QQVLPMFEQGDYASALTSLASLREPVDTFFDEVMVMADDDAV 665 >gi|260774575|ref|ZP_05883488.1| glycyl-tRNA synthetase beta chain [Vibrio metschnikovii CIP 69.14] gi|260610481|gb|EEX35687.1| glycyl-tRNA synthetase beta chain [Vibrio metschnikovii CIP 69.14] Length = 688 Score = 606 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 203/725 (28%), Positives = 336/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + + ++ + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFSTELAAAELTHDGIKWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++K ++G+ L Sbjct: 61 AEKQADKVLEKRGPAVSVAFDAQGNPTKAAQGWARGNGITVEQADRLK--TEQGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + ++ + A+ +P K MRW + +IRP+K++ +L Sbjct: 119 QEVKGQAAKAIVVELAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILND 231 +++ID ++ + GHRF + S Y L + V+ D E R+ I+ Sbjct: 169 DELIDGEILGVASARTIRGHRFMGEKEFTIDSAQQYPDILEQRGKVIADYETRKATIIAG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A VG D DL+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 AQQAAQQVGGIAELDDDLVEEVTALVEWPVVLTAKFEEKFLNVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI V+NI++ + +++GN +VV RL DA F+ D Sbjct: 289 VYDANKQLLPNFIFVTNIESKE-PRHVIEGNEKVVRPRLADAEFFFNTD----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L L R+ +L+ +F K+GT ++ RI L IA+ I ADVA Sbjct: 337 ---------LKSKLIDRLPQLETA--IFQQKLGTIKDKTDRITELAGYIAEQIGADVAQA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E + A+ E PR + +PT+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEPEAVALAMNEQYMPRFAGDQLPTD 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S +++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E + L + Sbjct: 446 GVSSALAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYKLDLVDLVAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNQAVEHDVIEFMLGRFRAWYQDEGFSVDVIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K ++ E+ L AEK L ++ Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFAGQLPAEVDLALLQEPAEKALGQDVAVMSE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ Y Q L S+ EP++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPVFASGDYQQALSQLASLREPVDAFFDNVMVMADDEALKQNRLTLLNDLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|258516200|ref|YP_003192422.1| glycyl-tRNA synthetase, beta subunit [Desulfotomaculum acetoxidans DSM 771] gi|257779905|gb|ACV63799.1| glycyl-tRNA synthetase, beta subunit [Desulfotomaculum acetoxidans DSM 771] Length = 698 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 217/734 (29%), Positives = 341/734 (46%), Gaps = 74/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFL EI +EEIP+R A +L I + L+E + Y + Y TP RL LY++ L Sbjct: 1 MAKDFLFEIGTEEIPSRFIAPALAELKEITVKALEENRLSYGKVNTYGTPRRLVLYIEAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP V G +A GF +S + +++ + A+ Sbjct: 61 AEEQDSLLREVKGPAVKVAFTPEGEPTRAAVGFAKSQQVDIKD--LVRRQVATVEYLYAI 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ R +VL + P+ I + +PK MRW + RP++ +L + E Sbjct: 119 KQELGRPAYEVLTELCPLLISSLHFPKPMRWGDLE-----VRFARPIRWLLALWGGET-- 171 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ + G +T+GHRF + P++V S Y+ L V++D + RR I Sbjct: 172 ---VNFSFAGLSSGKVTFGHRFLS-GPLEVDSPKDYLARLRSNYVIVDIDERRQMIWQQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA G + D+DLLEE+ LVE+ GSF++KYL LP+E++ ++ +Q+ F Sbjct: 228 QNLAEQSGGVVEPDEDLLEEVCNLVEYPTALCGSFEEKYLHLPKEVLITPMREHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI V N + GN +V+ ARL DA F++ D Sbjct: 288 LDSEGRLMPKFIAVRNGIHKY-LDTVRAGNEKVLRARLADAEFFFEED------------ 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 L PL ++ L VV+ +GT ++V R+ L ++ L+ A Sbjct: 335 --------LKTPLADKVEGLK--KVVYQESLGTVHDKVKRVIKLADYLSDLLIVGAAVKE 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA VL KADL T +V EF ELQG +G+EYA+ E AI EH PR +++P Sbjct: 385 QIMRAAVLCKADLVTNMVYEFTELQGIMGREYALKSGEEPVVAQAIFEHYLPRFAGDSLP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +++ADK DT+ +AI +P+GS+DP+ALRR LGI IIL + + I LS + Sbjct: 445 ETLPGKILAIADKFDTVAGCFAIGIQPTGSQDPHALRRQALGICHIILSSGLKISLSALV 504 Query: 530 EDQ---------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + +FF RLK D + +D I+A+L D+ Sbjct: 505 TAAYASYLEQEQVQLKLGLDELLVEMWVFFQIRLKNIFSDCGLGYDTIDAVLAAGFDDFS 564 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + L++F + L R + + EI P++L+ ++E+ LY Sbjct: 565 DTWERARALSQFRNEPAFSDLLTVFNRANNLSKNVD------VAEIKPEFLVDDSERNLY 618 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + MD K Y + + I EP+ FFD V+V +D +RDNRL+LL+ + Sbjct: 619 DHFLALKKQVAVEMDKKNYLGVLKAVAEIREPLGKFFDSVMVMAEDTNIRDNRLALLKSL 678 Query: 689 KNIILIVINVQKIV 702 ++ V + KIV Sbjct: 679 AGLMQSVADFSKIV 692 >gi|88860611|ref|ZP_01135248.1| glycyl-tRNA synthetase beta subunit [Pseudoalteromonas tunicata D2] gi|88817206|gb|EAR27024.1| glycyl-tRNA synthetase beta subunit [Pseudoalteromonas tunicata D2] Length = 689 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 207/719 (28%), Positives = 348/719 (48%), Gaps = 60/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + AE L L + Y++ Y +P RL + + GL Sbjct: 5 NLLIEIGTEELPPKSLRTLAEALLQNFCDELATLELSYESASWYASPRRLGVKVFGLINA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP + G KA G+ R G++ +++ D KG L V + Sbjct: 65 QQDKEVEKRGPALQAAFDAEGNPTKAAIGWARGCGIEVDQAERLETD--KGAWLLHVAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +E ++ + A+ K+P K MRW + +IRP+ ++ + Sbjct: 123 AGQAVESLIPDALSNALTKLPIAKPMRWGAYKT-----QFIRPVHTVTVFY-----GPSL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ + N GHRFH P I++ D LE+A V+ D E R+ I L Sbjct: 173 VEGTILGKAISNQLQGHRFHHPARIEINHADEAFAALEKAYVVADYEARKALIKGQIEAL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + D+ LLEE+ LVEW +F++ +L +P E + T+K +QK F + Sbjct: 233 AAEHNAIVAMDESLLEEVTSLVEWPVTLTATFEESFLSVPSEALIFTMKDDQKYFPLLDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L N F+ VSNI++ A ++ GN +VV RL DA F++ D+ Sbjct: 293 DGNLLNKFLFVSNIESK-NPAQVISGNEKVVRPRLADAQFFFETDK-------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 K L+ R+A L+ V+F ++GT ++ RI L IA+ + A V RA Sbjct: 338 ------KKTLESRLASLET--VLFQKELGTLKDKSERIAELSGFIAEKLGASVVDATRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EF ++QG +G YA E + A E PR + +P++ IS Sbjct: 390 LLSKTDLMTEMVMEFTDVQGIMGMHYARHDGETEAVALAQNEQYMPRFSGDALPSSLISC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----------- 524 +V+LADK D+L+ + I + P G KDP+ALRRA +G +RII+E ++++ Sbjct: 450 SVALADKFDSLVGIFGIGQAPKGDKDPFALRRAAIGALRIIVEKELNLDALDIINKAMTL 509 Query: 525 ----LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 LS +++ F R + + D+ I D+I+A+L L +K ++ F Sbjct: 510 FGEKLSNPNVAEDVFEFLLGRFRAWYQDQGIEVDIIQAVLARRPSQPLDFDRRVKAVSHF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + + KR+ ILA K + + + +++ L+ EAEK L A + + + Sbjct: 570 RSLEQAAALAAANKRVANILA---KNDFKAAEQVNENLLVEEAEKELAAQVKRYQAELAP 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + + L +I EP++ FFD V+V +D ++ NR +LL ++++ L V ++ Sbjct: 627 VIAAGDYQSVLEKLAAIREPVDTFFDNVMVMAEDEAIKQNRFTLLNELRSLFLQVADIS 685 >gi|254562265|ref|YP_003069360.1| glycine tRNA synthetase subunit beta [Methylobacterium extorquens DM4] gi|254269543|emb|CAX25509.1| glycine tRNA synthetase, beta subunit [Methylobacterium extorquens DM4] Length = 696 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 305/691 (44%), Positives = 410/691 (59%), Gaps = 37/691 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+S GL ++ DPKKG+ YLAV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKSAGLASLDQATTVTDPKKGEFYLAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL+SI+ E +++ + Sbjct: 121 LDVLAEILPGIIKSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPEVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I +T GHRF AP P +V+ D Y++ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DGITADTVTSGHRFLAPEPFEVRRFDDYVQALERADVILDADRRKDIILHDAKDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 L+LVED+ LLEE+ GLVE V MGSF++++L +P E IR TI+ NQKCFV R L Sbjct: 241 LDLVEDEGLLEEVAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSDEL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F+LVSN+ ASDGG AI GN RVV ARL DA FW+ D+ Sbjct: 301 APAFVLVSNLIASDGGVAITAGNERVVRARLSDARFFWETDK------------------ 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L+ R+ +LD +VFH K+GTQGERV+RI L K+IA L+ D AL +RA L+K Sbjct: 343 --AVRLEDRLPKLD--SIVFHEKLGTQGERVARIAALAKEIAPLVGTDPALAERAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA LQ E+ S AIEEH KP GP + VPT+ +SI V+L Sbjct: 399 ADLVTEMVGEFPELQGLMGRKYAALQGEHDSVAAAIEEHYKPVGPSDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE----------NKIDIPLSQFI 529 ADKLDTL FW+I+EKP+GSKDP+ALRRA LG+IR ++E K Sbjct: 459 ADKLDTLAGFWSIDEKPTGSKDPFALRRAALGVIRAVIERSLRLSLASLLKGRFASGSDE 518 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEK 588 +L+ FF DRLK+YL D+ RHDLI+A+ P D+LL +V ++ L F ++ G+ Sbjct: 519 RTADLLAFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLMVVRRVEALGAFLATDDGKN 578 Query: 589 FLLSAKRIFQILAIEEKKN-REISLEISPQYLL--LEAEKRLYAVISDFGTHIQESMDHK 645 L KR IL IEEKK+ R E+ L ++ ++ + Sbjct: 579 LLAGYKRAANILRIEEKKDGRAYDEAPDAGLAASGQPEERALAEALAAARQEASAAVAAE 638 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 + L + P++ FF++V VN DD Sbjct: 639 DFAGAMRALSRLRAPVDAFFEKVTVNADDPA 669 >gi|226942180|ref|YP_002797253.1| glycyl-tRNA synthetase subunit beta [Azotobacter vinelandii DJ] gi|259511919|sp|C1DFV1|SYGB_AZOVD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226717107|gb|ACO76278.1| Glycyl-tRNA synthetase protein, beta subunit [Azotobacter vinelandii DJ] Length = 685 Score = 605 bits (1559), Expect = e-170, Method: Composition-based stats. Identities = 212/723 (29%), Positives = 338/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ SEE+P + A + L G+ Y+ R Y P RL + ++ Sbjct: 1 MSAQDFLVELGSEELPPKALKSLATAFLAGIEKGLAAAGLEYRVARFYAAPRRLAVLVEH 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P++ GP V G +A GF R G+ ++ + G Sbjct: 61 LVAQQPDRTLNLDGPPVAAAFDAEGNPTQAALGFARKCGV------ELHEIDSSGAKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + +L IV ++ ++P PK MRW T ++RP + ++ + Sbjct: 115 SRHIPGQPASALLPAIVQASLDELPIPKRMRWGTRKE-----EFVRPSQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++D ++ G + GHRFH P +++ Y+ DL A VL D RR I Sbjct: 165 GNQVVDCEILAQKAGRESMGHRFHHPDAVRISQPSSYLEDLRSAYVLADFAERRELIAGR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ V +DLL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VADLAAQQQGSAVVPEDLLDEVTALVEWPVPLVCSFEERFLTVPQEALISTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L CFI V+NI++ D A IV GN +VV RL DA F+ +D+ Sbjct: 285 LLDANGKLLPCFITVANIESRD-PAQIVAGNEKVVRPRLTDAEFFFNQDKR--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL VVF A++G+ E+ R+ L IA+ I D Sbjct: 335 -----------QPLESFNQRL--ASVVFQAQLGSVLEKAERVSRLAGFIAERIGGDPQHA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSKADL +E+V EFPELQG G YA+ E A++E PRG +P+ Sbjct: 382 IRAGLLSKADLASEMVGEFPELQGIAGYHYALNAGEPEDIARALDEQYMPRGAGAQLPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E ++D+ L + Sbjct: 442 LTGAAVAMADKLDTLVGIFGIGMPPTGSKDPYALRRAALGILRILIEKQLDLNLEEASHF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + + F DRL+ D I A+ + + + ++ Sbjct: 502 AVAQYGTKVKASGLAEQVSEFVFDRLRARYEDEGIDVSSYLAVRALQPASAYDLDLRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E KR+ +L E K + I +Y +E LY+ + Sbjct: 562 VQAFRRLPEAEALAAVNKRVSNLLGKYEGK---LPAAIEARYFDNASEFSLYSALQQAQH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ +RY + + L S+ +P++ +F+ VLVN +D +R NR ++L ++ + L V Sbjct: 619 AVRPLAAERRYREALERLASLRDPVDAYFEAVLVNAEDPAIRANRHAMLAQLRGLFLCVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|84683642|ref|ZP_01011545.1| glycyl-tRNA synthetase beta subunit [Maritimibacter alkaliphilus HTCC2654] gi|84668385|gb|EAQ14852.1| glycyl-tRNA synthetase beta subunit [Rhodobacterales bacterium HTCC2654] Length = 742 Score = 605 bits (1559), Expect = e-170, Method: Composition-based stats. Identities = 278/765 (36%), Positives = 402/765 (52%), Gaps = 90/765 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ +AAEDL ++ L E G+ Y + TP RL L L L Sbjct: 1 MADLLIELFSEEIPARMQGRAAEDLKKLVTDGLVEAGLTYGGAAAFATPRRLCLTLTDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GPR A + A++GFLRSTGL D +D KKG + AV+ K R Sbjct: 61 AMSPDTREERKGPRTDAPETALEGFLRSTGLT--KDQLEARDEKKGQAWYAVIAKKGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ I+ PWPKSMRW + W+RPL SILCIL E +++ LD+ Sbjct: 119 ADIVAEVLERTIRNFPWPKSMRWGAG-----SLKWVRPLHSILCILSDE-GGAEVVPLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP P KV S D Y L++A V+LDP R I +DA + A A G Sbjct: 173 DGIAAGDTTQGHRFMAPGPFKVSSFDDYQAKLKKACVVLDPAERAETIWHDAEQAAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ELVEDK LL E+ GLVEW V MG ++ LP E+++ ++K +QK F + + Sbjct: 233 FELVEDKGLLSEVAGLVEWPVVLMGDIGADFIDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V+AARL DA FW+ D + S Sbjct: 293 EKFVTVANRETADDGATILAGNQKVLAARLSDAKFFWENDLRTVAQHGMTSMSES----- 347 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH ++G+Q ER+ RI L ++IA ++ A+ A ++KA Sbjct: 348 -------------LTNVTFHRELGSQSERIDRIAALARRIAPMVGAEPDEAVLAAKVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA + + DA +H P GP ++VPT +S+ V+LA Sbjct: 395 DLASEMVYEFPELQGIMGRYYAKRAGLSDAVADACRDHYSPLGPSDDVPTAPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++L N + + L + Q Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLANDLRLNLDPVFDMQLLRLKGAR 514 Query: 533 ---------------------------NLILFFHDR------------------------ 541 ++ F DR Sbjct: 515 EAALPNDGVAMMIDEIADHGVFAAALETVLDAFKDRDGAEALAGLKTAVPDLSDDLLAFF 574 Query: 542 ---LKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 LK++L D IRHD+I+A L P ND+L +V + L F ++ G KR Sbjct: 575 HDRLKVHLRDEGIRHDVIDACLNMPGNDDLTLLVKRARALAAFLATEDGANLTQGFKRAN 634 Query: 598 QILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 IL E+K+ E S ++ EK L+A + ++ +M+ + + ++ Sbjct: 635 NILTQAEEKDGVEYSFGADVKFAEAAEEKALFAALDSAAAPLKTAMEAEDFAGAMSVMAD 694 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + PI+ FF+ V +N +++ VR NRL+LL I++I + V ++ +I Sbjct: 695 LRAPIDAFFEAVQINTENQIVRRNRLNLLARIRDICMSVADLTRI 739 >gi|331006049|ref|ZP_08329387.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium IMCC1989] gi|330420135|gb|EGG94463.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium IMCC1989] Length = 691 Score = 604 bits (1558), Expect = e-170, Method: Composition-based stats. Identities = 203/725 (28%), Positives = 347/725 (47%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFL+E+ +EE+P + K + + + L EG+ + + Y TP RL + + GL Sbjct: 1 MSQDFLVELGTEELPPKALLKLSTAFTAGIKAGLSAEGLSFSEISPYATPRRLAVVVSGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +P E GP V G KA + F + G+ + + K D + Sbjct: 61 AESTPVNDVEIWGPPVKVAFDAEGNPSKAAEAFAKKNGIAITD--LVTANDGKMDKLVFR 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +L+ IV ++ K+P K MRW + + ++RP+ ++ + + Sbjct: 119 TQAGGVQTTSLLEGIVNNSLAKLPIAKRMRWGASRT-----EFVRPVHWLVMLFGND--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 I+D + + +T GHRFH + + + Y L + A V+ D R+ I Sbjct: 171 --IVDATVLGLSANRLTRGHRFHYNQTLDIANASEYASKLNDIAYVVADFAQRKQLIEQQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A VG V LL+E+ GLVEW G F++++L +P E + ++K +QK F Sbjct: 229 VIAEAKKVGGTAVIGSGLLDEVAGLVEWPVALTGRFEERFLSVPAEALISSMKEHQKYFH 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI VSNI+++D A ++ GN RV+ RL DA F+ D+ Sbjct: 289 VVDEKGELLPYFITVSNIESTD-PAQVIDGNERVIRPRLSDAAFFFDTDK---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L + +L VVF AK+GT E+ RI L + IA+ + +V Sbjct: 338 ----------KTTLASKREQLK--KVVFQAKLGTVYEKTQRIANLSRAIAEKLSVNVDTA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L K DL +E+V EF ++QG G YAV E A+ EH PR + +P+N Sbjct: 386 VRAGELCKCDLVSEMVYEFADMQGIAGYHYAVHDGEASDVALAMNEHYMPRFAGDVLPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V+LAD+LDTL+ + I E+P+GSKDP+ALRRA++ ++R+++E + +I L + Sbjct: 446 DVSAVVALADRLDTLVGIFGIGEQPTGSKDPFALRRASVAVLRLLVEQQRNIDLRDLLTL 505 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ + DR + + ++ I + +A+ + L I ++ Sbjct: 506 AFQQHNNLAEGQAVIEQVLSYMLDRFRAWYEEQSIPATVFQAVSAKQLSQPLDIDQRVQA 565 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 +N F + E + KR+ ILA + + ++ L +AEK LYA + + Sbjct: 566 VNFFRQLPEAEALAAANKRVANILAKAD----SVPDSVNVDSLQEDAEKALYAAVVEQQK 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ ++Y + L S+ E ++ FFDQV+V DD +++NRL+LLQ ++ + Sbjct: 622 VVEPLFAQRQYKEALTALASLREVVDTFFDQVMVMADDEALKNNRLALLQQLRGLFFETA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISCL 686 >gi|152989471|ref|YP_001345404.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa PA7] gi|150964629|gb|ABR86654.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa PA7] Length = 685 Score = 604 bits (1558), Expect = e-170, Method: Composition-based stats. Identities = 207/725 (28%), Positives = 341/725 (47%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + E + LK G+ Y R Y P RL + ++ Sbjct: 2 MSAKDFLVELGTEELPPKALNSLGEAFLNGIEKGLKAAGLSYSAARFYAAPRRLAVLIEQ 61 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF + G+ +++ K G Sbjct: 62 LAVQQPDRTVNLDGPPLQAAFDASGKPTQAALGFAKKCGVD------LEQIDKSGPKLRF 115 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L IV ++ ++P PK MRW+ ++RP + ++ + Sbjct: 116 SQTIAGQPAAGLLPGIVETSLNELPIPKRMRWAARRD-----EFVRPTQWLVMLF----- 165 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 166 GDEVVDCEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKR 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 226 VAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+N+++ IV GN +VV RL DA F+K+D+ Sbjct: 286 LLDANGKLLPRFITVANVESK-APENIVSGNEKVVRPRLTDAEFFFKQDK---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT ++ R+ L IA+ I D Sbjct: 335 ----------KQPLESFNERLQ--NVVFQAQLGTVFDKARRVSGLAAYIAERIGGDAQNA 382 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 383 ARAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEPEDVALALNEQYMPRGAGAELPST 442 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + Sbjct: 443 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVHA 502 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + +++ + + L ++ Sbjct: 503 AVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQA 562 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KR+ ILA K E+ + L+ AEK L + +++ + Sbjct: 563 VQAFRQLPEAEALAAANKRVSNILA---KSEDEVPASVDASLLVEAAEKALGSAVANAES 619 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ + L V Sbjct: 620 EVAPLAAARDYRAALARLAALREPVDAFFADVMVNVDDSSVRANRYALLAKLRGLFLGVA 679 Query: 697 NVQKI 701 ++ + Sbjct: 680 DISLL 684 >gi|119475258|ref|ZP_01615611.1| Glycyl-tRNA synthetase, beta subunit [marine gamma proteobacterium HTCC2143] gi|119451461|gb|EAW32694.1| Glycyl-tRNA synthetase, beta subunit [marine gamma proteobacterium HTCC2143] Length = 697 Score = 604 bits (1558), Expect = e-170, Method: Composition-based stats. Identities = 202/724 (27%), Positives = 351/724 (48%), Gaps = 60/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+EI +EE+P K + + + +K G+ Y ++ Y TP RL + + GL Sbjct: 8 HDFLVEIGTEELPPTALLKLSNSFTAQVAAGIKTAGLSYTGVQSYATPRRLAIVVSGLDS 67 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +PEK GP G KA F + G+ I D I+ D K + + Sbjct: 68 QTPEKDVIVWGPPKKIAFDADGKPTKAAAAFAKKNGVG-IDDINIEND-GKAEKLVYKSL 125 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K ++L +I+ A+ K+P K MRW + ++RP++ I+ + Sbjct: 126 KAGISATELLPSIIQDALDKLPIAKRMRWGAERT-----EFVRPVQWIVMM-----QGSH 175 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 II+ + GN T GHRFH + +++ Y LE ++ E R+ I Sbjct: 176 IIECSILGFSAGNTTRGHRFHCDTTLAIENPAAYATLLEHSGHIVPAFETRKAMIRQQVV 235 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +G V D+DLL E+ GLVEW GSF+ ++L +P E + ++K +QK F Sbjct: 236 AEGEKLGGAAVIDEDLLNEVTGLVEWPVALTGSFENRFLEVPPEALISSMKEHQKYFHVE 295 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI + D + +++GN RV+ RL DA F++ D+ Sbjct: 296 NKDGYLMPHFITVSNIVSRD-PSQVIRGNERVIRPRLSDAAFFFETDKKIA--------- 345 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L+ R+ +L +VF A++GT ++ R+ L IA I ++ A R Sbjct: 346 -----------LETRVEKLK--SIVFQAQLGTLYDKTQRMMGLAASIADSIGSNRAYASR 392 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A LSKADL +++V EF ++QG G+ YA+ Q E +AI + P+ + +P + Sbjct: 393 AAELSKADLVSDMVLEFDKMQGIAGRYYALAQGEEEEVANAIRDQYLPKFSGDQLPESLT 452 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 ++LAD+LDT++ + I + P+GSKDP+ALRRATLG++RII+E ++ + L ++ Sbjct: 453 GCAIALADRLDTIVGIFGIGQPPTGSKDPFALRRATLGVLRIIVEKRLPLDLRVLLKQAQ 512 Query: 534 ---------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++ + +R + + + I ++ ++ L I +K +N Sbjct: 513 QQYSHLSAGENLVETVLQYMTERFRAWYEEEQINAEVFMSVSEKGLSQPLDIDQRVKAVN 572 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA + ++ + L+ ++EK L ++ + Sbjct: 573 RFSMLPEAQALAAANKRVSNILAKLD--SQAAIGSVDNTLLVEDSEKNLAELVEQKAQQL 630 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +++Y + L + PI+ FFD V+V VD+ V++NRL+LL+ ++++ L V ++ Sbjct: 631 APLFANRQYSEALTSLAELRVPIDAFFDNVMVMVDEESVKNNRLALLKSLRSLFLEVADI 690 Query: 699 QKIV 702 +V Sbjct: 691 SLLV 694 >gi|83594287|ref|YP_428039.1| glycine--tRNA ligase [Rhodospirillum rubrum ATCC 11170] gi|123525869|sp|Q2RQ43|SYGB_RHORT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|83577201|gb|ABC23752.1| Glycine--tRNA ligase [Rhodospirillum rubrum ATCC 11170] Length = 721 Score = 604 bits (1558), Expect = e-170, Method: Composition-based stats. Identities = 258/736 (35%), Positives = 383/736 (52%), Gaps = 76/736 (10%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +A EDL+ ++ L E G+ + +R + TP RL L + GL P+ EER G Sbjct: 13 IPARMQVRAIEDLTKLVGTGLAEAGLSHGGLRGFVTPRRLTLVVDGLPVAQPDVHEERRG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P+ A KAI GFL S GL ++ KG AV+ + R +VL I+ A+ Sbjct: 73 PKADAPDKAIAGFLGSLGLTRDQLET--RETPKGPFLFAVIERKGRPTAEVLPEIIYRAL 130 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA-KEKIIDLDLKEIP------- 184 + WPKSMRW+ F+W+RPL SIL + + + L+ +P Sbjct: 131 TALSWPKSMRWARGQ-----FTWVRPLHSILAVFEGAPLRGAIGLGVSLEGLPVGFIADP 185 Query: 185 -----------CGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 G T GHRF AP P V+ Y L +A VL+D E R+ I A Sbjct: 186 AAAPEGTPLLAFGATTRGHRFLAPEPFPVRDFADYAARLRQAHVLIDREERKRVIAERAA 245 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA+ GL + +D LLEEI GLVEW MG DK ++ +P E++ +++++QK F Sbjct: 246 ALAAGEGLRVKDDPALLEEITGLVEWPVPLMGHIDKAFMDVPAEVLTTSMRSHQKYFSVE 305 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L F++VSN+ A+D A +V GN RV+ ARL DA FW +D+ Sbjct: 306 NADGTLNARFVVVSNMDATDSSARVVAGNERVLRARLSDAKFFWDQDR------------ 353 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVD 412 PL ++ L VFHAK+G+ ++V+R+R +A + AD +LVD Sbjct: 354 --------KAPLAGKVEALGAR--VFHAKLGSDLDKVTRVRAGAAWLAARVPGADASLVD 403 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +L+KADL T +V EFPELQG +G+ YA+ E + AI +H P GP + PT Sbjct: 404 RAALLAKADLTTGMVGEFPELQGLMGRYYALHDGEPPAVAQAIRDHYSPVGPGDACPTAA 463 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 S+ V+LADK+DTL FW I+EKP+GSKDP+ALRRA LG+IR+I+EN + +PL + + Sbjct: 464 TSVCVALADKIDTLAGFWLIDEKPTGSKDPFALRRAALGVIRLIVENSLRLPLREVLGSA 523 Query: 531 -----------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDN 566 + +LI F +RLK+ ++ +RHDLIEA+ D+ Sbjct: 524 ISTYGDRMLAQCGKADGTSSDVIEHDLIAFIAERLKVQQREKGVRHDLIEAVFSQGGEDD 583 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE-ISLEISPQYLLLEAEK 625 L+ ++ + L +F +S +G L + +R I+ IEEKK+ + +S + + E+ Sbjct: 584 LVRLLARVSALADFLASEEGTNLLSAYRRATNIVRIEEKKDGKPVSGDPDNALFEQDEER 643 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L + + S+ + + L + P++ FFD+V VN D +R+NRL LL Sbjct: 644 ALSLALDTLLGEVSPSLAAEDHAAAMRALARLRGPVDAFFDRVTVNADTPALRNNRLRLL 703 Query: 686 QYIKNIILIVINVQKI 701 I + + + KI Sbjct: 704 ARIGTAMATLADFSKI 719 >gi|257453498|ref|ZP_05618788.1| glycyl-tRNA synthetase, beta subunit [Enhydrobacter aerosaccus SK60] gi|257448956|gb|EEV23909.1| glycyl-tRNA synthetase, beta subunit [Enhydrobacter aerosaccus SK60] Length = 725 Score = 604 bits (1558), Expect = e-170, Method: Composition-based stats. Identities = 217/731 (29%), Positives = 357/731 (48%), Gaps = 63/731 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L+ + LK+ + + ++ + P RL L ++G+S Sbjct: 26 MSTILFELGTEELPPKNLKTLRDALNNHVTQSLKDANIRFDTIKSFAAPRRLALQIQGIS 85 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+KIE++ GP V G KA GF + G+ IK KGD + Sbjct: 86 EKQPDKIEQKRGPAVKAAYDKDGNPTKAAQGFAQGLGIDVKDLITIK--GDKGDYIGYEM 143 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + ++L +I A+ ++P K MR S ++RP+K ++ + + Sbjct: 144 NVIGQPVAELLPSIFQKALDELPIAKRMRSGAERS-----EFVRPVKWLVLLKDDQVLPA 198 Query: 174 KIIDLD-----LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 I L L+ G + GHRFH P +K+ + D Y ++L EA V+ D + R+ I Sbjct: 199 TIQGLTSGEAGLQGFEKGRFSLGHRFHHPDMVKIDTADSYEQNLAEAHVIADFDKRQQQI 258 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +LA VG + +DLL+E+ LV++ SF+ ++L +P+E + T++ +QK Sbjct: 259 KAQVQQLADEVGATAIVPQDLLDEVTALVDYPVALRASFEPRFLQVPQEALISTMQADQK 318 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F +G L FI +SNI + D A ++ GN +VV RL DA F+ +DQ Sbjct: 319 YFCLTDSQGKLQPYFIFISNIDSKD-KAQVIAGNEKVVRPRLADAEFFFLQDQ------- 370 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 +PL L VF K+GT E+ RI L IA I DV Sbjct: 371 -------------KQPLFALTENLKTR--VFQDKLGTIWEKSERIAKLAAFIATQIGEDV 415 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +LSKADL + +V EFPELQG G YA L E + AIEE P+ + + Sbjct: 416 EQTARAGLLSKADLASTLVGEFPELQGVAGTYYARLNQEPEAVAAAIEEQYLPKFSGDKL 475 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P I ++LAD+LDTL+ + I++ P+GSKDP++LRRA +G++RI++E K+ + L Sbjct: 476 PATNIGTALALADRLDTLVGIFGIDQAPTGSKDPFSLRRAAIGVLRILIEKKLPLNLVVL 535 Query: 529 IED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +E + ++ F + R + ++ + D I A+ + + Sbjct: 536 LEQALLGYVGKIDDLPKTFKQVMAFINSRYRAMYEEQGVSVDTIMAVQALQPQVPMDFDH 595 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 IK + F ++ + KR+ ILA E EI+ ++ YL AEK LY + Sbjct: 596 RIKAVQAFRDLPPAKQLAEANKRVANILAKAE---GEIATQVQTAYLQEPAEKALYQAVQ 652 Query: 633 DFGTHIQESM--DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 I+ D+ Y QI L ++ +P++ FF+QV+VN +D ++ NRL+LL+ ++ Sbjct: 653 TAAQSIEPHQHTDNANYTQILQSLATLQQPLDDFFEQVMVNSEDANLKANRLALLKKVRG 712 Query: 691 IILIVINVQKI 701 + L V ++ ++ Sbjct: 713 LFLTVADISEL 723 >gi|254474910|ref|ZP_05088296.1| glycyl-tRNA synthetase, beta subunit [Ruegeria sp. R11] gi|214029153|gb|EEB69988.1| glycyl-tRNA synthetase, beta subunit [Ruegeria sp. R11] Length = 743 Score = 604 bits (1558), Expect = e-170, Method: Composition-based stats. Identities = 271/766 (35%), Positives = 393/766 (51%), Gaps = 90/766 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y TP RL L L+G+ Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRVTDGLVEAGLTYAGAHALSTPRRLTLALEGVL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA KAI+GFLR GL D ++D KG VY A + K R Sbjct: 61 DHSPTVREERKGPKVGAPDKAIEGFLRGAGLT--RDQLEERDTPKGAVYFATIEKAGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ I+ PWPKSMRW + W+RPL SILCIL AED +++ LD+ Sbjct: 119 ADIIAEVLEDTIRNFPWPKSMRWGAG-----SLRWVRPLHSILCILSAED-GAEVVALDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP I V S + Y L+ A V+LDP R AI DA A A G Sbjct: 173 DGITSGNTTRGHRFMAPDEITVSSFEDYATKLKRAYVVLDPAEREAAIWQDATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V +GS D ++L LP E+++ ++K +QK F + + Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLLGSIDDEFLELPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW+ D + + Sbjct: 293 EKFVTVANRETADNGATILAGNQKVLSARLADAKFFWENDLRTAKSEAG----------- 341 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + + L +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 342 ----MSAWVDNLS--NVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA + +A E+H P GP ++VPT +S+ V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAEAAGLPSAVANACEQHYSPLGPSDDVPTESVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + + L I+ L Sbjct: 456 DKMDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLNNDVRVRLDSVIDAHLLRHEMAQ 515 Query: 541 --------RLKLYL----HDRDIRHDLIEAILRPENDNLLT------------------- 569 RL + D + + +L + +L Sbjct: 516 NGDDPVATRLMQDMLTEIADHGVFGSAVRTVLDAFDGDLPKHIEQLKEQLPDVSRDLLSF 575 Query: 570 IVDLIKH---------------------------LNEFFSSAKG------EKFLLSAKRI 596 D +K + + L KR Sbjct: 576 FHDRLKVFLRDQGIRHDVIDACIAMDGNDDLTLLVKRARALEDFLKSEDGTNLLQGFKRA 635 Query: 597 FQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 IL E+K+ E S ++ + EK L+ ++ I +++ + + + Sbjct: 636 NNILTQAEEKDGVEYSYGADKKFAEDDTEKALFDALATSEGAISSAIEAEDFAAAMGSMA 695 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ P++ FF+ V VN D+ VR NRL+LL I+ ++ V ++ +I Sbjct: 696 ALRAPVDAFFEAVQVNSDNEVVRRNRLNLLSQIRKVVGQVADLTRI 741 >gi|157373155|ref|YP_001471755.1| glycyl-tRNA synthetase subunit beta [Shewanella sediminis HAW-EB3] gi|189082276|sp|A8FP54|SYGB_SHESH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157315529|gb|ABV34627.1| Glycine--tRNA ligase [Shewanella sediminis HAW-EB3] Length = 689 Score = 604 bits (1557), Expect = e-170, Method: Composition-based stats. Identities = 208/722 (28%), Positives = 349/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE LK+ + +++ + P RL + + L+ Sbjct: 5 NLLIEVGTEELPPKSLRKLAESFLSNFTDELKKAELSFESAVWHAAPRRLAICVNQLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ ++K D KG+ L + Sbjct: 65 QADKVVEKRGPAIAQAFDTDGNPTKAAMGWARGNGITVEQAGRLKTD--KGEWLLHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + ++ K+P PK MRW + +IRP+ ++ +L +E + Sbjct: 123 VGVETKSLIAAMAQRSLDKLPIPKPMRWGN-----NTTQFIRPVHTVTMLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 ++ +L I GHRF ++ D+Y+ L+E V + E R+ I A Sbjct: 173 VEGELLGQKSARIIRGHRFMGKASFELVHADNYLSALKEQGKVEANYEVRKALIKAGAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGVADLEDDLLEEVTSLVEWPVVLTANFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++ D I+ GN RVV RL DA F++ D+ + Sbjct: 293 KAGQLMPNFIFVTNIESKD-PQQIIAGNERVVRPRLADAEFFFETDKKD----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT +RV+RI + IA IDA+ RA Sbjct: 341 ---------SLESRLTSLET--VIFQKQLGTIKDRVARISDMAGFIANSIDANADEAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A++E KP+ + VPT +S Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVALALQEQYKPKFSGDTVPTAPVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 + V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+RI +EN + + L I Sbjct: 450 VCVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRICVENNLPLNLIDLIAKAQE 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ FF R + + D+ + D+I A+L + IK ++ Sbjct: 510 LHGSNLTNDKAAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARRPTSPADFDSRIKAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + + KR+ ILA K E+ I L+ AEK L +++ + Sbjct: 570 FRSLEQASALAAANKRVSNILA---KVEGELPAAIDAGLLVENAEKVLAEKLNELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL + E ++ FF+ V+V DD +++NRL+LL ++ L ++ Sbjct: 627 PLFAAANYQEALALLADLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFLHAADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|188582530|ref|YP_001925975.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium populi BJ001] gi|179346028|gb|ACB81440.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium populi BJ001] Length = 724 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 298/706 (42%), Positives = 404/706 (57%), Gaps = 65/706 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL EER G Sbjct: 13 IPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLPARGDAVREERRG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 PRVGA + A+ GFL+S GL ++ DPKKG+ YLAV+ +P R DVL I+P I Sbjct: 73 PRVGAPEAAVQGFLKSAGLSSLDQATTVTDPKKGEFYLAVIERPGRETLDVLAEILPGII 132 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 + PWPKSMRW + + W+RPL+SI+ E ++ ++ I G T GH Sbjct: 133 KSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPDVVPFAVEGISAGTTTRGH 192 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 RF +P P +V+ D Y+ LE A V+LD + R++ IL+DA LA A GL+LVED+ LLEE Sbjct: 193 RFLSPEPFEVRRFDDYVPALERADVILDADRRKDIILHDAKDLAFARGLDLVEDEGLLEE 252 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVLANCFILVSNIQA 311 + GLVE V MGSF++++L +P E IR TI+ NQKCFV R LA F+LVSN+ A Sbjct: 253 VAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSEELAPAFLLVSNLVA 312 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 SDGGAAI GN RVV ARL DA FW+ D+ + L+ R+ + Sbjct: 313 SDGGAAITAGNERVVRARLSDARFFWETDK--------------------ATKLEDRLPK 352 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVALVDRAIVLSKADLCTEIVRE 429 LD +VFH K+GTQGERV+RI L ++IA ID D+ LV+RA L+KADL TE+V E Sbjct: 353 LD--AIVFHEKLGTQGERVARIAGLARRIASDIDVQFDLDLVERAARLAKADLVTEMVGE 410 Query: 430 FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINF 489 FPELQG +G++YA LQ E+ AIEEH KP GP + VPT +SI V++ADKLD L F Sbjct: 411 FPELQGLMGRKYATLQGEDPRVAAAIEEHYKPLGPSDRVPTEIVSIAVAMADKLDLLAGF 470 Query: 490 WAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------------- 528 W+I+EKP+GSKDP+ LRRA LG+IR+ILEN + +PL Sbjct: 471 WSIDEKPTGSKDPFGLRRAALGVIRLILENGLRLPLLDGPIWDAFDELPGKSVAILDLSS 530 Query: 529 ---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVD 572 ++L+ FF DRLK+YL D+ RHDLI+A+ P D+LL +V Sbjct: 531 VAALDALDEDTELTDPRAKDLLAFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLLVVR 590 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLL--LEAEKRLYA 629 ++ L F ++ G+ L KR IL IEEKK+ R E E+ L Sbjct: 591 RVEALGAFLATDDGKNLLAGYKRAANILRIEEKKDGRAYDAEPDAALAASGEPEERALAE 650 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 ++ ++ + + L + P++ FF++V VN DD Sbjct: 651 ALTATREEASAAVAAEDFSGAMRALSRLRAPVDAFFEKVTVNADDP 696 >gi|88705386|ref|ZP_01103097.1| Glycyl-tRNA synthetase beta chain [Congregibacter litoralis KT71] gi|88700476|gb|EAQ97584.1| Glycyl-tRNA synthetase beta chain [Congregibacter litoralis KT71] Length = 693 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 204/724 (28%), Positives = 339/724 (46%), Gaps = 60/724 (8%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M LLE+ EE+P+ + L L+ L ++G+ + + P RL + ++ L Sbjct: 1 MSQPLLLEVGCEELPSSSLEQLGIALREQLLRHLADKGLSHGASHWFAAPRRLGVLVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++ E LGP + G +A GF G I D KG Sbjct: 61 VEQADDETREALGPPLAQAKDEEGNWSRAAQGFAAKQGCTADELEII--DTPKGQRLGLK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + L TI AI +P PK MRW S ++RP+ I+ + + Sbjct: 119 QVVTGAKTSECLDTIANSAIADLPMPKRMRWGA-----SRREFVRPVHWIVLMYGDKSGF 173 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++ I GN + GHRFHAP + S +Y L +A V+ D + R + I Sbjct: 174 GEVL-----GITSGNTSKGHRFHAPQSVTFASAANYRETLRKARVIADFQERCDLIREQV 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A+A+G + + D+DLL E+ LVEW GSFD +L +P E + +++++QK F Sbjct: 229 EKAATALGGQALIDEDLLGEVASLVEWPVALAGSFDTAFLEVPAEALISSMQSHQKYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + L F+ VSNI++ D G + GN RV+ RL DA F+++D+ + Sbjct: 289 VDADNKLMPNFVTVSNIESQDPGQV-IAGNERVIRPRLADAAFFFEQDRQS--------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L R+ RL VVF K+G+ E+ RI+ L K+A LI A+ + Sbjct: 339 -----------TLASRVPRLG--AVVFQKKLGSLLEKTQRIQRLAGKLAALIGANQTDTE 385 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L KADL +++V EF +LQG G YA EN + DAI +H P ++P Sbjct: 386 RAAELCKADLVSDMVLEFGDLQGIAGAYYARNDGENDAVADAIAQHYWPTQAGSDLPVGD 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 +++ V+LAD+LDTL+ + I + P+GSKDP+ALRRA++ ++RII+E + + L + +E Sbjct: 446 VAVAVALADRLDTLMGIFGIGQPPTGSKDPFALRRASIAVLRIIIEKGLALDLRECLELA 505 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + + DRL + I ++ A+ + ++ + Sbjct: 506 GEGFPAEVIAENAGDAVFDYMLDRLPALYENDAIAIEVFRAVRGSGSSKPADFDRRVRAV 565 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + F + E + KR+ ILA E +R+ +S L E LY I+ Sbjct: 566 HAFGERPEAEALAAANKRVSNILAKAE--DRDDDARVSADLLSEANEIALYEAITAAERD 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 ++ Y L ++ P++ FFD+V+VN +D ++ NRL+LL ++ + + + Sbjct: 624 NVNALAKADYSTALGRLATLRAPVDAFFDEVMVNAEDPALKANRLALLASLRGQFMAIAD 683 Query: 698 VQKI 701 + ++ Sbjct: 684 ISQL 687 >gi|78224137|ref|YP_385884.1| glycyl-tRNA synthetase subunit beta [Geobacter metallireducens GS-15] gi|123729181|sp|Q39RG5|SYGB_GEOMG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|78195392|gb|ABB33159.1| glycyl-tRNA synthetase beta chain [Geobacter metallireducens GS-15] Length = 686 Score = 603 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 214/726 (29%), Positives = 342/726 (47%), Gaps = 67/726 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LEI +EEIPA KA D+ +L L+ + + ++R TP RL L +KGL Sbjct: 1 MKELFLEIGTEEIPAGFIPKAMADMEALLAKELENARISFDDIRTLGTPRRLALTVKGLP 60 Query: 61 PHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+ +GP G +A +GF R G+ S + +KG+ AV Sbjct: 61 TVQPDAEITAMGPARNVAFDAEGKPTRAAEGFARGQGVDVASLTLVA--TEKGEYVAAVR 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ R + ++L I+P + +P+ KSMRW + RP+ I+ + Sbjct: 119 KESGRPVPELLAEILPRLVANIPFRKSMRWGALD-----VRFARPIHWIVALF-----DG 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ I G I+ GHRF A P V+ HY+ + E V+ DPE R+ I + H Sbjct: 169 VVVPFTFGNIESGTISRGHRFMANQPFPVRDFAHYLEECERHFVIPDPERRQEIIRREIH 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 R+A A G L+ D+ LLEE+ L E+ G+F ++L +P E++ +++++Q+ F Sbjct: 229 RVAKAAGGHLLPDEGLLEEVSFLCEYPSAVHGTFSAEFLKVPREVLITSMRSHQRYFSIV 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI ++N D +V+GN RV+ ARL DA F++ DQ Sbjct: 289 DDAGKLMPGFITINNTLTED-PTVVVKGNERVLRARLSDARFFFEEDQ------------ 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALVD 412 L+ R+ L +VV+ K+GT E++ R R L + +A L++ A V Sbjct: 336 --------KVKLETRVESLK--NVVYQQKLGTSFEKMERFRALAEGLADLLNPAVKVKVS 385 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 +A L KADL + +V EFPE+QG +G+EYA+++ E+ AI EH P +P + Sbjct: 386 QAAFLCKADLVSGMVGEFPEVQGIMGREYALIEGEDAEVAAAIAEHYLPTQAGGELPASD 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ----- 527 I VS+ADKLDT+ + + P+GS DPYALRR+ LGII IIL+ + L + Sbjct: 446 IGAFVSMADKLDTICGCFGVGLIPTGSADPYALRRSALGIINIILDKGYRLSLEEQVDKA 505 Query: 528 ------------FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +++ FF R + DR + A+ D L+ I Sbjct: 506 LGLLAAKLTRPAVDVKADVLEFFRGRFVNLMADRHASDAVDAAVAAGCAD-LVDAAARIA 564 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L+EF S E ++ KR+ I+ + + AE L + Sbjct: 565 ALSEFRSHPDFEPLAVAFKRVGNIVK------EGVDAPVDTALFQDAAEGLLNDAVQGVA 618 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++E + Y + + ++ P++ FFD+V+V +D VR NRL+LL I ++ + Sbjct: 619 VSVREKIATGAYLEALTEIAALRGPVDTFFDKVMVMAEDERVRTNRLALLTGIARMLGAI 678 Query: 696 INVQKI 701 + KI Sbjct: 679 ADFAKI 684 >gi|16125591|ref|NP_420155.1| glycyl-tRNA synthetase subunit beta [Caulobacter crescentus CB15] gi|221234341|ref|YP_002516777.1| glycyl-tRNA synthetase subunit beta [Caulobacter crescentus NA1000] gi|13422689|gb|AAK23323.1| glycyl-tRNA synthetase, beta subunit [Caulobacter crescentus CB15] gi|220963513|gb|ACL94869.1| glycyl-tRNA synthetase beta chain [Caulobacter crescentus NA1000] Length = 692 Score = 603 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 270/730 (36%), Positives = 385/730 (52%), Gaps = 69/730 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLE++SEEIPARMQ +AA+DL + L G + + ++ + P RL L +GL Sbjct: 1 MPQLLLELFSEEIPARMQAQAAKDLERMAREHLAAAGFLPEALKTFAGPRRLTLVAEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EE GPRVGA +A++GFLR GL D +++D VY+A + K R Sbjct: 61 LAQADRKEELKGPRVGAPPQAMEGFLRKAGLT--QDQLVERDG----VYMAFIEKKGRPT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ +V ++ PWPKSM W T W+RPLK ILC+L E ++ + Sbjct: 115 AEIIAEMVEAIVRGFPWPKSMIWGTKK-----LRWVRPLKRILCVLDRE-----VVPFAI 164 Query: 181 KEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + I G++T GHRF P + D Y+ LE+ V+LD E R+ IL L A Sbjct: 165 EGIESGDVTEGHRFMGEAKPFVAKDFDEYVAGLEKHFVVLDVEERKARILEGCKTLCFAR 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGV 298 LELVED+ LL+E+ GL EW +G D +L LP E+IR +++T+QK F R E Sbjct: 225 HLELVEDQGLLDEVAGLAEWPTPVLGDMDPVFLSLPPEVIRTSMRTHQKYFAVRKAGEEG 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FI ++NIQ +DGGA I GN++V+++RL DA FW D Sbjct: 285 LAPHFITIANIQPADGGAVIAAGNAKVLSSRLSDARFFWDED------------------ 326 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + + + +LD V FHAK+GT +RV RI L +IA L+ ADV A L+ Sbjct: 327 --VKVGFEPWLKKLD--GVTFHAKLGTMAQRVERIVALAAEIAPLVGADVEKTKEAARLA 382 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +++V EFPELQG +G YA + DA+ +H KP+GP + VPT +SI V+ Sbjct: 383 KADLASQMVGEFPELQGIMGGYYARTFGLDHEIADAVRDHYKPQGPSDAVPTAPVSIAVA 442 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI----------------- 521 LADKLDTL +F+AI EKP+GSKDPYALRRA LG IRIILEN Sbjct: 443 LADKLDTLASFFAIEEKPTGSKDPYALRRAALGAIRIILENNRKIGFRMFFVPYLDRMQA 502 Query: 522 ----------DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + L+ FF DRLK+ L D+ RHDL++A+ +D+L IV Sbjct: 503 EWRAGVVTSPRLNADWLSISTELLAFFADRLKVTLRDQGKRHDLVDAVFALGDDDLARIV 562 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ L+ F + G+ L KR IL EEKK + + AE LY + Sbjct: 563 ARVEALDGFLKTDDGKNLLAGYKRASNILKAEEKKGALPTGAPAEPAADSAAEVGLYNAL 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 +++++ + + L + P++ + D V VN + E RDNRL L +++ Sbjct: 623 RLLDKPLKDALAKEDFTGAMTQLAELRGPVDAYLDGVFVN--EPEHRDNRLRTLATVRDA 680 Query: 692 ILIVINVQKI 701 + V + I Sbjct: 681 MGQVADFGLI 690 >gi|163733327|ref|ZP_02140770.1| glycyl-tRNA synthetase subunit beta [Roseobacter litoralis Och 149] gi|161393115|gb|EDQ17441.1| glycyl-tRNA synthetase subunit beta [Roseobacter litoralis Och 149] Length = 742 Score = 603 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 255/768 (33%), Positives = 376/768 (48%), Gaps = 95/768 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ AA+DL ++ L E G+ Y + + TP RL L L+G+ Sbjct: 1 MPDLLIELFSEEIPARMQRHAAQDLQKLVADGLVEAGLTYASAAAFSTPRRLTLTLEGVL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GP+ A KAI+GFLR G+ + +D KG V A + K R Sbjct: 61 AASPTTVEERKGPKADAPDKAIEGFLRGAGVTREALET--RDTPKGPVLFAKITKEGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ ++ I+ PWPKSMRW W+RPL SILCIL E A +++ L + Sbjct: 119 AQIVAEVLEKTIRNFPWPKSMRWG-----TGTLRWVRPLHSILCILSDE-AGTQVVPLSV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V D Y L+ A V+LDP R + I +DA A A G Sbjct: 173 DLITAGDSTQGHRFMAPDRFSVTGFDDYTAKLKRAFVVLDPAERADMIWHDATNQAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG D+ +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAGLLAEVAGLVEWPVVLMGRIDEAFLDLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW D Sbjct: 293 ERFVTVANRDTADNGATILAGNEKVLSARLADAKFFWDNDLRVA---------------- 336 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + + + L+ +V FH K+GTQ E V R+ L +++A ++ AD + A L+KA Sbjct: 337 -KAGMGEWLKALE--NVTFHNKLGTQAELVDRVAALAREMAPMVGADPDEAEEAARLAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y ++ + A +EH P GP + VPT +S+ V+LA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYLKAAGKSDAIAAAAQEHYAPLGPSDAVPTAPVSVAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 +K+D L FWAI+EKP+GSKDP+ALRRA LG++R+ L N + I L + ++ + Sbjct: 454 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVVRLALGNGVRIDLERLLKLL-VAEQLIG 512 Query: 541 RLKLYLHDRDIR----------------------HDLIEAILRPENDNLLTIVDLIKHLN 578 ++ D + +E LR D+ I+ + L Sbjct: 513 IARIKFEDEFEPVPIEERGRYYQGVLEFWRALEEFESLETKLRTSPDDEPLIIQGARSLL 572 Query: 579 EFF--------------------------------------------SSAKGEKFLLSAK 594 F + GE + K Sbjct: 573 TFLHDRLKVYLRDQGIRHDVIDACIAMPGNDDLTLLVKRAKALSDVVGTEDGENLIQGFK 632 Query: 595 RIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 R IL ++ + E S ++ + E+ L+ + I +M + + Sbjct: 633 RANNILTQAQEADGVEYSYGADIKFAETDEERALFEALDTAEAIITPAMKSEDFATAMSA 692 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ PI+ FF+ V VN D+ VR NRL+LL I I L V ++ +I Sbjct: 693 MATLRAPIDAFFEAVQVNSDNPTVRRNRLNLLSRITQICLSVADLTRI 740 >gi|311696630|gb|ADP99503.1| glycyl-tRNA synthetase beta subunit [marine bacterium HP15] Length = 693 Score = 603 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 191/702 (27%), Positives = 333/702 (47%), Gaps = 62/702 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + ++ + + L+E G+ + + + P RL + ++ Sbjct: 1 MATQDFLVELGTEELPPKALKPLSDAFTQGIARGLEEAGIEFGKVEAFAAPRRLAVRIRD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P+K E+ GP V G +A+ GF S G+ ++ D KG + Sbjct: 61 LADSQPDKSVEKRGPAVKAAFDDAGNPTRALTGFATSLGVTPDQLDTLETD--KGAWVVY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +++ +V ++ +P PK MRW + ++RP+ ++ + Sbjct: 119 RTVEQGKPTVELMPELVEQSLAGLPIPKRMRWGAHRT-----EFVRPVHWVVMLF----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 K+I+ + + GN T GHRFH P + V + Y L++ V+ D RR I Sbjct: 169 GNKVIEAPIMGLTPGNKTRGHRFHCPKSLIVPTPSDYEVVLKQEGYVIADFAERREQIRA 228 Query: 231 DAHRLA-SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA G + V D+DLL+E+ L EW MG F++++L +P E + ++K +QK Sbjct: 229 GVTELAEKEAGGKAVIDEDLLDEVTALNEWPVPLMGRFEERFLEVPAEALISSMKEHQKY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +G + FI V+NI++ D + +V GN +V+ RL DA F++ D+ Sbjct: 289 FHVVAADGEMLPLFITVANIESKD-PSQVVSGNEKVIRPRLSDAAFFYETDR-------- 339 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L+ R+ L +VF K+G+ ++ R+ L KKIA I +D A Sbjct: 340 ------------KTKLEDRIDALKP--IVFQEKLGSIYDKSVRVAALAKKIADAIGSDPA 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 L +RA +L+K DL TE+V EF +LQG +G+ YA E A+ E PR +++P Sbjct: 386 LAERAAMLAKTDLVTEMVLEFTDLQGIMGQYYAANDGEPEDVAKALNEQYMPRFAGDDLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 T +++AD+LD+L+ + IN+ PSG++DP+ALRRA+LG++RII+E ++ + L Sbjct: 446 TTLTGCAIAIADRLDSLVGLFGINQPPSGTRDPFALRRASLGVLRIIIERELPLDLQTCC 505 Query: 530 E--------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 E ++ + +R + + ++ I ++ A+ L +K Sbjct: 506 EWAEENFSVLTEQNTASTVVDYMLERFRAHYDEQGIGAEVYLAVHARRPTRPLDFDRRVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KR+ IL + I + L AEK L + Sbjct: 566 AVEAFRQLPEAQALAGANKRVSNILTKQ--GGDSIGETVDASLLQDSAEKALAEQVDQQA 623 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 + ++ Y L S+ P++ FFD+V+V DD V Sbjct: 624 AKVLPLFENGDYASALSSLASLRAPVDNFFDEVMVMADDEAV 665 >gi|93006879|ref|YP_581316.1| glycyl-tRNA synthetase subunit beta [Psychrobacter cryohalolentis K5] gi|92394557|gb|ABE75832.1| Glycine--tRNA ligase [Psychrobacter cryohalolentis K5] Length = 697 Score = 603 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 349/733 (47%), Gaps = 70/733 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ EE+P + + L + L + + + +++ + P RL + ++G+S Sbjct: 1 MSTILFELGCEELPPKSLKPLRDALQESVTEQLADANISFDSIKAFAAPRRLAIQIQGIS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++ EE+ GP + G +A GF + G++ I + KGD V Sbjct: 61 DKQPDRTEEKRGPAIKAAFDADGNPTRAAMGFAKGLGIEASKLTTI--NTDKGDYVGYVQ 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++L I A+ +P K MR + + ++RP++ + + + Sbjct: 119 TIQGQATTELLPAIFQTALDNLPIAKRMRSGASRN-----EFVRPIQWAVLM-----QND 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++D ++ G T GHRFH+P + + Y + L+ V+ D + R+ I N Sbjct: 169 AVVDATIQGHQTGTQTRGHRFHSPDYHNIAHANDYEQLLDGLKVVADFDKRQMLIKNQVK 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA V + + + LL+E+ LV++ SF+ ++L +P+E + T++ +QK F Sbjct: 229 ALADEVSSDAIVPQSLLDEVTALVDFPIALRASFEARFLQVPQEALISTMQADQKYFCLT 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI ++NI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 DKAGKLQPYFIFITNIESKDPNQ-IIEGNEKVVRPRLADAEFFFLQDQ------------ 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD- 412 +PL L VF K+GT E+ RI L IA L+ +D Sbjct: 336 --------KQPLFALTESLKTR--VFQDKLGTIWEKSERIAKLAAFIAALMQQQGQQIDI 385 Query: 413 ----RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +LSKADL + +V E+PELQG G YA L +E + ++EE P+ + + Sbjct: 386 DQTVRAGILSKADLASSLVGEYPELQGIAGTYYARLNDEPEAVAASLEEQYLPKFSGDVL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + I ++LAD+LDTL+ +AI++ P+GSKDP++LRR+ +GI+RI++E ++ I L Sbjct: 446 PQTPVGICLALADRLDTLVGIFAIDQAPTGSKDPFSLRRSAIGILRILIEKQLPINLVAL 505 Query: 529 IED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 IE ++ F + R + ++ + D I+A+ L Sbjct: 506 IEQAIKGYSTAEGSKIDKMGDTFTQVMAFLNSRYRAMYTEQGVNVDTIQAVQAINPHMPL 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ + F + + S KR+ ILA K ++ + L AE+ LY Sbjct: 566 DFDQRIRAVQTFSNLPQASMLADSNKRVANILA---KSEVSVADTVDEALLSEPAEQNLY 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A + T +Q ++ Y Q+ L S+ EP+ FFD V+VN +D ++ NRL+LL+ + Sbjct: 623 ASVKQAQTVVQPLLEQADYTQVLQTLASLDEPLTQFFDNVMVNSEDTALKANRLALLKQV 682 Query: 689 KNIILIVINVQKI 701 + + L V ++ ++ Sbjct: 683 RALFLTVADISEL 695 >gi|163852512|ref|YP_001640555.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium extorquens PA1] gi|163664117|gb|ABY31484.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium extorquens PA1] Length = 726 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 310/721 (42%), Positives = 416/721 (57%), Gaps = 67/721 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+S GL ++ DPKKG+ Y AV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKSAGLASLDQATTVTDPKKGEFYHAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL+SI+ E +++ + Sbjct: 121 LDVLAEILPGIIKSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPEVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP P +V+ D Y++ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DGITAGTVTSGHRFLAPEPFEVRRFDDYVQALERADVILDADRRKDIILHDAKDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 L+LVED+ LLEE+ GLVE V MGSF++++L +P E IR TI+ NQKCFV R L Sbjct: 241 LDLVEDEGLLEEVAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSDEL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F+LVSN+ ASDGG AI GN RVV ARL DA FW+ D+ Sbjct: 301 APAFVLVSNLIASDGGTAITAGNERVVRARLSDARFFWETDK------------------ 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L+ R+ +LD +VFH K+GTQGERV+RI L K+IA L+ AD AL +RA L+K Sbjct: 343 --ATKLEDRLPKLD--SIVFHEKLGTQGERVARIAALAKEIAPLVGADPALAERAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA LQ E+ S AIEEH KP GP + VPT+ +SI V+L Sbjct: 399 ADLVTEMVGEFPELQGLMGRKYAALQGEHDSVAAAIEEHYKPVGPSDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+ R++L + I L + + Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVTRLVLTSNSRIHLIELAKKLVGVFEKS 518 Query: 532 --------------------------------QNLILFFHDRLKLYLHDRDIRHDLIEAI 559 +L+ FF DRLK+YL D+ RHDLI+A+ Sbjct: 519 ISEDSIWRVTAASSEEFATKPFDREEMLAMIASDLLAFFADRLKVYLRDQGARHDLIDAV 578 Query: 560 LR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQ 617 P D+LL +V ++ L EF S+ G+ L KR IL IEEKK+ R Sbjct: 579 FALPGQDDLLLVVRRVEALGEFLSTDDGKNLLAGYKRAANILRIEEKKDGRAYDEAPDAA 638 Query: 618 YLL--LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 E+ L ++ ++ + + L + P++ FF++V VN DD Sbjct: 639 LAASGQPEERALAEALAAARQEASAAVAAEDFAGAMRALSRLRAPVDAFFEKVTVNADDP 698 Query: 676 E 676 Sbjct: 699 A 699 >gi|304393464|ref|ZP_07375392.1| glycyl-tRNA synthetase, beta subunit [Ahrensia sp. R2A130] gi|303294471|gb|EFL88843.1| glycyl-tRNA synthetase, beta subunit [Ahrensia sp. R2A130] Length = 778 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 294/794 (37%), Positives = 426/794 (53%), Gaps = 111/794 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDFLLE+ SEEIPARMQ KAA DL ++ L + G+ Y+ R+YWTP RL L L+GL+ Sbjct: 1 MPDFLLELRSEEIPARMQRKAAGDLKKLVTDALVDAGLTYEGAREYWTPRRLTLDLRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI GFLR GL+++ + + DPKKG+ +AV+ KP R Sbjct: 61 ARSADIKEERKGPRTDAPEKAIAGFLRGAGLESVDQAETRTDPKKGEFLVAVIEKPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ +++P I+ PWPKSMRW + + W+RPL+SI+ +L E+ + +++ ++ Sbjct: 121 ADIIASVMPGIIENFPWPKSMRWGAKSAQAGSLRWVRPLQSIIALLGVENDETEVVPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +TYGHRFHAP I V+ D Y+ LE A V+LD E R++ I DA LA A G Sbjct: 181 SGIATGKVTYGHRFHAPEEITVRRFDDYVAKLEAANVVLDAERRKDIIRADAANLAFAKG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ LVEW +G F YL +P E+IRLTIK NQKCFV R + E L Sbjct: 241 LELVEDEALLEEVANLVEWPVALLGEFGADYLDIPPEVIRLTIKENQKCFVLRKQGETAL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N F+LVSNI A DGG I GN++VV ARL DA FW+ D + + Sbjct: 301 SNTFLLVSNIDAHDGGTEIASGNAKVVNARLSDAKFFWETDLHTIETEGFQP-------- 352 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + +LD +V FHAK+G+QG+RV RI L +++A L+ AD + A ++K Sbjct: 353 --------WIDKLD--NVTFHAKLGSQGDRVRRIAALARELAPLVGADPDDAEHAAKIAK 402 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL ++++ EFPELQG +G++YA ++ E A E H P GP ++VPT +S+ V+L Sbjct: 403 ADLNSQMIYEFPELQGAMGRKYAEIKGEKPEVAAAAELHYSPLGPTDDVPTEPVSVAVAL 462 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+ R++LENK+ + + I Sbjct: 463 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVTRLLLENKLSVSVFSLIRESYIQHLFR 522 Query: 531 ----------------DQNLILFFHDR---LKLYLHDRDIRHDLIEAILRPE-------- 563 ++ FF R + + +I +D A+++ + Sbjct: 523 RQAWNEIVLIPLCDHGYASITAFFFYRGDEVAPWAKFSEIDYDRRVAVVKAKEEEADTRD 582 Query: 564 ------------------------NDNLLTIVDLIKH----------LNEFFSSAKGEKF 589 D L D +K L + + + Sbjct: 583 SATLTSGLQDYELSYELPSFGSVIPDLLAFFHDRLKVYLRDSGARHDLIDAVITPASDDL 642 Query: 590 LLSAKRI----------------------FQILAIEEKKNREISLEISPQYLLLEAEKRL 627 L +R+ ILA EEKK ++ + P + E+ L Sbjct: 643 LAITRRVEALGSFLDTDDGANLLAGTKRAVNILAAEEKKGTGVAESVDPAMFDTDQERAL 702 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + E+++ + Y L ++ P++ F D V+VNV+D VR NRL+L++ Sbjct: 703 FTTLESAEHCAAEAVEKQNYEGAMKALAALRAPVDAFLDDVMVNVEDDAVRANRLALMRR 762 Query: 688 IKNIILIVINVQKI 701 I++ V + KI Sbjct: 763 IRDATGTVADFSKI 776 >gi|85860061|ref|YP_462263.1| glycyl-tRNA synthetase subunit beta [Syntrophus aciditrophicus SB] gi|123517130|sp|Q2LVI9|SYGB_SYNAS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|85723152|gb|ABC78095.1| glycyl-tRNA synthetase beta chain [Syntrophus aciditrophicus SB] Length = 690 Score = 602 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 225/728 (30%), Positives = 362/728 (49%), Gaps = 67/728 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LLEI +EEIPA KA +D+S ++ L E + + + + TP RL L + + Sbjct: 1 MSNELLLEIGTEEIPAAFLPKALQDMSSMIRKALTEARIPFGQVHTFGTPRRLCLAVADV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +++ E+LGP G KA GF +S G+ ++ D KG+ Sbjct: 61 AEKQEDQVIEKLGPARRVSFDADGNPTKAALGFAKSQGVDISEIGTMQTD--KGEYICIS 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +L ++ I + + KSMRW F + RP+ IL + E Sbjct: 119 RHISGKSTVSLLSEMLSRLITSLSFKKSMRWGNLD-----FRFARPIHWILALYGGE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I ++ I G + GHRF P V +L Y+ E V++ PE R+ IL +A Sbjct: 171 --VIPFRIENIESGATSRGHRFMHPEAFPVSNLQEYLARTREHFVIVAPEERKRIILEEA 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A+AV ++E++DLLE + LVE+ + GSFD+KYL LP+E++ ++ ++QK F Sbjct: 229 RKAAAAVSGRVLENEDLLETVTYLVEYPTIVCGSFDRKYLELPKEVLITSMMSHQKYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L FI ++N A D A + +GN +V+ ARL DA F++ DQ Sbjct: 289 VDQEGRLLPFFITINNTLARD-PAVVTRGNEKVIRARLSDAQFFFEEDQ----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 LD R+ L VVFH +GT E+V R R L IA ID V Sbjct: 337 ---------KIRLDDRVEGLQQ--VVFHTLLGTSYEKVQRFRKLAGWIADRIDPSLKNRV 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +R+ +L+KADL T++V EF ELQG +G+EYA+L E+ + AI EH P ++P Sbjct: 386 NRSALLAKADLDTQMVGEFSELQGIMGREYALLAGEDPTVARAIYEHYLPLTAGGDLPQT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 VS+ADK+D++ F+ +N P+G+ DPYALRR LG+I IIL+ K + L ++ Sbjct: 446 HEGAIVSIADKMDSIAGFFGVNLVPTGTADPYALRRQALGVINIILDKKYPLTLDDLVDE 505 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +++I FF RL+ L + HD++ A+L +L+ ++ I Sbjct: 506 CISILEEKLKRPAEETRKDVIEFFRGRLENMLISQGHPHDVVSAVLAAGFADLVQVIKKI 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + + F + E ++ KR IL + I P E +LY+ + + Sbjct: 566 EAMESFKAHPAYEPLAIAFKRAGNILKEFR------NGRIDPALFSAAEENQLYSTLLEA 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + ++++ Y L ++ +PI+ FF+ V+V VD+ +R NRLSLL+ + +I Sbjct: 620 RARVVKALEKDDYPAALLELAALRQPIDHFFESVMVMVDEENIRFNRLSLLEALFSIFRR 679 Query: 695 VINVQKIV 702 + + +IV Sbjct: 680 IADFSRIV 687 >gi|217977293|ref|YP_002361440.1| glycyl-tRNA synthetase, beta subunit [Methylocella silvestris BL2] gi|217502669|gb|ACK50078.1| glycyl-tRNA synthetase, beta subunit [Methylocella silvestris BL2] Length = 737 Score = 602 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 297/722 (41%), Positives = 404/722 (55%), Gaps = 69/722 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA+DL ++ L E+G+ + + TP RL L++ GL Sbjct: 10 MPDLLLELFSEEIPARMQAQAADDLKRLVTEALAEKGLSCEGAAAFATPRRLALHVAGLP 69 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKG-DVYLAVLRKPKRL 119 P+ EE+ GPRVG+ + A+ GFL+S GL ++++ +I+ DPKK + YLAV+ + + Sbjct: 70 ARQPDLREEKKGPRVGSPEAAVQGFLKSAGLASLAEAKIEVDPKKKTEFYLAVVERKGQP 129 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 DVL I+P I++ PWPKSMRW A W+RPL +I+ E +I+ Sbjct: 130 TLDVLAEILPAVIKRFPWPKSMRWGAASVSPEALRWVRPLHAIIATFGPETEDPEIVPFS 189 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + I ++T+GHRF AP PIKV+ D Y LE+A V+LDP RR+ IL+D LA A Sbjct: 190 VGGIEASDVTFGHRFMAPGPIKVRRFDDYAPALEKAKVVLDPTRRRDIILHDLRDLAFAQ 249 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE-GV 298 GLEL+ED LLEE+ GLVEW V G FD +L +P E+IR TI+ NQKCFV E G Sbjct: 250 GLELIEDAALLEEVSGLVEWPVVLTGEFDAVFLDIPPEVIRATIRANQKCFVLNDAESGK 309 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LAN F LV+NI A DGGAAI GN+RVV ARL DA FW+ D Sbjct: 310 LANQFALVANIDAPDGGAAIAAGNARVVRARLSDAKFFWETD------------------ 351 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 L L+ R+ +L+ V FH K+GTQ ERV R+ L + IA + AD L RA +L+ Sbjct: 352 --LKVRLEDRLQKLE--AVTFHEKLGTQRERVRRLEALARLIAPQVGADPELAARAALLA 407 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EFPELQG +G+ YA Q E +AI +H KP+GP + +P ++I V+ Sbjct: 408 KADLPSEMVGEFPELQGLMGRYYAAAQGEAPEVAEAIGDHYKPQGPGDRIPAAPVTIAVA 467 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK---------------IDI 523 LADK+D L FWAI+EKP+GSKDPYALRRA LG++ I+LEN+ +D Sbjct: 468 LADKIDILAGFWAIDEKPTGSKDPYALRRAALGVVAIVLENRLRLRLLDILALHKKIVDD 527 Query: 524 PLSQF----------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 L + +L+ FF DRLK+YL +R RHDLI+A+ Sbjct: 528 DLRKLHLERARGGGGDSAAMTGQVGPDTVPADLLGFFADRLKVYLRERGARHDLIDAVFA 587 Query: 562 -PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK-----NREISLEIS 615 P D+L I+ ++ L F S+ G L +R IL EEKK L S Sbjct: 588 LPGQDDLTLILRRVEALGAFLSAEDGANLLGGYRRAANILRAEEKKFGAEEAASYELPFS 647 Query: 616 PQYLLLEAEKRLYAVIS--DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 P L E L V+ ++ + + L + P++ FF++V VN Sbjct: 648 PASLREPEELALANVLDPKGAEPRWSAAIRDEDFEAAMKALAQLRAPVDAFFEKVTVNAP 707 Query: 674 DR 675 D Sbjct: 708 DP 709 >gi|114766654|ref|ZP_01445595.1| glycyl-tRNA synthetase beta subunit [Pelagibaca bermudensis HTCC2601] gi|114541117|gb|EAU44171.1| glycyl-tRNA synthetase beta subunit [Roseovarius sp. HTCC2601] Length = 741 Score = 601 bits (1550), Expect = e-169, Method: Composition-based stats. Identities = 264/765 (34%), Positives = 386/765 (50%), Gaps = 90/765 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL ++ L E G+ Y + TP RL L + GL Sbjct: 1 MPDLLIELFSEEIPARMQTRAAEDLKKLVTDGLVENGLTYAGAAAFSTPRRLTLTVSGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+V A +KAI+GFLR G+ ++ KKG AV+ KP R Sbjct: 61 DASPATREERRGPKVDAPEKAIEGFLRGAGVSREQCE--AREDKKGTFLYAVIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ AI+ PWPKSMRW W+RPL I+C+L +E A + ++ L++ Sbjct: 119 AEIVAEVLEAAIRNFPWPKSMRWGAG-----TLRWVRPLHRIMCVLSSE-AGDAVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF +V S Y L+ A V+L E R I +DA A A G Sbjct: 173 DGIEAGQTTEGHRFMGDGAFEVTSFADYETRLKRAKVILSAEERAETIWHDATNRAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVEW V MG D ++L LP E+++ ++K +QK F + Sbjct: 233 LEVVEDRGLLAEVAGLVEWPVVLMGKIDAQFLELPPEVLQTSMKEHQKFFSVKNPATSRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ D GA I+ GN++V++ARL DA FW+ D N Sbjct: 293 EGFVTVANVETPDDGATILAGNNKVLSARLSDAKFFWENDLRVAKNEG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ RL +V FH K+G+Q +R+ RI L ++IA ++ AD AL ++A ++KA Sbjct: 341 ----LEAWTERLG--NVTFHNKLGSQRDRIERIAALAREIAPMVGADAALAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A EEH P GP + VPT +S+TV+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPTEVAVACEEHYSPLGPSDAVPTAPVSVTVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++L N + + L + + Q L Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLVNGLRLHLDRLFDAQILRHKIEA 514 Query: 541 RLKLYLHD--------------------------RDIRHDLIEAILRPEN---DNLLTIV 571 + + + ++ + D+LL Sbjct: 515 GVDSDQQELRDALLREIAQHGVFGSSVKAVIDEIEGDAAEWVKEVTNHRPDLSDDLLAFF 574 Query: 572 -DLIK---------------------------------HLNEFFSSAKGEKFLLSAKRIF 597 D +K L E + G + KR Sbjct: 575 HDRLKVHLKGEGVRHDVIDAVLAMPGNDDLAQVVRRATALGEVLGTEDGANLVQGFKRAN 634 Query: 598 QILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 IL E K+ E S P++ ++ EK L+A + I+ +++ + + + Sbjct: 635 NILTQAEDKDGVEYSFGADPKFAEVDEEKALFAALDAADAEIKPALEKEDFAAAMTAMAG 694 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + PI+ FF+ V VN + VR NRL+LL I+ L V ++ ++ Sbjct: 695 LRAPIDAFFEAVQVNSESPVVRRNRLNLLSRIRTSCLQVADLNRL 739 >gi|258545073|ref|ZP_05705307.1| glycyl-tRNA synthetase, beta subunit [Cardiobacterium hominis ATCC 15826] gi|258519693|gb|EEV88552.1| glycyl-tRNA synthetase, beta subunit [Cardiobacterium hominis ATCC 15826] Length = 689 Score = 601 bits (1549), Expect = e-169, Method: Composition-based stats. Identities = 207/726 (28%), Positives = 347/726 (47%), Gaps = 64/726 (8%) Query: 1 MP---DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M L+EI EE+P + A+ + L G+ + ++ TP RL ++ Sbjct: 1 MSATTTLLIEIGVEELPTKAVTTLADAGRDLWAQALANAGLTHGDIEALATPRRLAWRIR 60 Query: 58 GLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 L+ ++ ER GP + G KA GF S G+ + +D KG + Sbjct: 61 DLATRQSDQKIERKGPALAAAKDKDGNWSKAALGFAASCGVDVAALA--VEDTPKGKWLM 118 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 +P + +E +L + +P K MRW S++RP+ S++ + Sbjct: 119 YYGEQPGQPLEALLPELFRHVCDNLPIAKRMRWGDHEQ-----SFVRPVLSLVAL----- 168 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 A ++++ L + G T GHR H P + + S Y DL A ++ R +I Sbjct: 169 ADDRVLPLAYFGVQAGRETLGHRVHHPQAVAIASATSYEADLRGAHIISSHAARMESIRA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A+A+G V LL E+ L EW GSFD++YL +P+E++ T++ NQK F Sbjct: 229 QVEAKAAALGGVAVIPPALLAEVASLTEWPVAIAGSFDERYLAVPQEVLITTMQDNQKTF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G + FI V+N++++D AA+ +GN +V+ R DA FW++D Sbjct: 289 AVVGADGKIRPHFIAVANLESADE-AAVRKGNEKVIRPRFADAEFFWQQD---------- 337 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 L L + RL+ VV+ K+G+ + R+ LG+ +A + AD Sbjct: 338 ----------LKHKLADYLPRLE--HVVYQEKLGSVAAKTRRLEALGRALAPVCGADADN 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V A +SK+DL TE+V EFPELQG +G+ YA + A++E +PRG +P Sbjct: 386 VATAAHISKSDLLTEMVMEFPELQGLMGRYYAAAEGYAADIAAALDEQYQPRGAGGALPQ 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + +++A+KLDTL+ +AI KP+GSKDPYALRR + +IR+I EN++ +PL+ +++ Sbjct: 446 TRTGLALAIAEKLDTLVGGFAIGAKPTGSKDPYALRRMAISLIRLITENELALPLAAWLD 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + +RL + ++ IR + +A+L +D+L+ I I+ Sbjct: 506 KSAAQYDAALGAPIHVAAVREYILERLDSHYREQGIRSETCQAVLALGSDDLVDIERRIR 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L+ F S L SAKRI IL KKN E + L AE+ L+ D Sbjct: 566 ALDAFAGSPSATSLLASAKRIRNIL----KKNGERDGAVQTALLQEPAEQALWQAWQDKQ 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++++ Y + L ++ P++ FF V+V DD ++ NRL+LL ++ + Sbjct: 622 PAFEQALVAGDYRAALEQLATLGAPLDAFFTDVMVMSDDPALQQNRLALLTTLQRGFDQI 681 Query: 696 INVQKI 701 ++ + Sbjct: 682 ADLSLL 687 >gi|126737300|ref|ZP_01753035.1| glycyl-tRNA synthetase subunit beta [Roseobacter sp. SK209-2-6] gi|126721885|gb|EBA18588.1| glycyl-tRNA synthetase subunit beta [Roseobacter sp. SK209-2-6] Length = 747 Score = 601 bits (1549), Expect = e-169, Method: Composition-based stats. Identities = 270/770 (35%), Positives = 392/770 (50%), Gaps = 94/770 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y + TP RL L L+GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRVTDGLVEAGLTYAGAAAFSTPRRLTLALEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR GL D ++D KG VY A + KP R Sbjct: 61 AESPTVREERKGPKVGAPDKAIEGFLRGAGLT--RDQLEERDTPKGAVYFAAIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ ++ ++ PW KSMRW + W+RPL SILC+L E A ++DLD+ Sbjct: 119 AAIIAEVLEDTVRNFPWSKSMRWG-----TGSLRWVRPLHSILCVLSDE-AGATVVDLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T+GHRF AP I V + Y L+ A V+LD R+ AI +A A A G Sbjct: 173 DGIKSGNTTHGHRFMAPDEIIVTGFEDYAAKLKRAHVVLDTAERQQAIWQEATNQAFARG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V +G D ++L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLLGDIDAEFLELPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW D + Sbjct: 293 EGFVTVANRETADQGATILAGNQKVLSARLADAKFFWANDLRVAKSE------------- 339 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +L +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 340 --TGMAAWAEKLS--NVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA +A E H P GP ++VPT +S+ V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAEAAGLPQEVANACEMHYSPLGPSDDVPTEPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------------- 525 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++LEN + + L Sbjct: 456 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLENDVRMSLFAVLKEQANEVAEGV 515 Query: 526 ------------------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAI--LRPEND 565 ++FI++ + + + R + + I L +D Sbjct: 516 AGVENQLFIQSGQAEELEAEFIKNMGVEDILAYLNEKDELEEGDRKEFEQGISFLERISD 575 Query: 566 NLLTIVDLIKH---------------------------LNEFFSSAKG------EKFLLS 592 L D +K + + E L Sbjct: 576 LLTFFHDRLKVFLRDQGIRHDVIDACIAMEGNDDLTLLVKRARALEDFLKSEDGENLLQG 635 Query: 593 AKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR IL+ E+K+ E S ++ ++EK L+A ++ I +++ + + Sbjct: 636 FKRANNILSQAEEKDGVEYSYGADVKFAEDDSEKALFAALAASEGAISTAIEAEDFAAAM 695 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ P++ FF+ V VN D+ VR NRL+LL I+ + V ++ +I Sbjct: 696 GGTAALRAPVDAFFEAVQVNSDNEVVRRNRLNLLSQIRKVCGQVADLSRI 745 >gi|254512072|ref|ZP_05124139.1| glycyl-tRNA synthetase, beta subunit [Rhodobacteraceae bacterium KLH11] gi|221535783|gb|EEE38771.1| glycyl-tRNA synthetase, beta subunit [Rhodobacteraceae bacterium KLH11] Length = 731 Score = 600 bits (1548), Expect = e-169, Method: Composition-based stats. Identities = 280/756 (37%), Positives = 404/756 (53%), Gaps = 82/756 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL + L E G+ Y + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAGEDLKKRITEGLVEAGLTYASAAALTTPRRLTLAIEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KA++GFLR GL D ++D KG VY A + K R Sbjct: 61 AESPTIREERKGPKVGAPDKAVEGFLRGAGLT--RDQLEERDTPKGPVYFATIEKTGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW W+RPL SILCIL E A +++ L++ Sbjct: 119 AEIVAEVLEATIRNFPWPKSMRWGRG-----TMRWVRPLHSILCILSDE-AGAQVVPLEV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G+ T GHRF AP V S ++Y L+ A V+L P R I NDA +A A G Sbjct: 173 EGIASGDTTEGHRFMAPARFAVTSFENYATKLKHAFVMLSPSERAEHIWNDAQNMAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDK LL E+ GLVEW V MG D ++L LP E+++ ++K +QK F + + Sbjct: 233 LELVEDKGLLAEVAGLVEWPVVLMGQIDDEFLDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + SD GA I+ GN +V++ARL DA FW+ D Sbjct: 293 ERFVTVANRETSDNGATILAGNQKVLSARLADAKFFWENDLRIA---------------- 336 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 LD + +D+ +V FH ++GTQ ER+ RI + +A++ D A +L+KA Sbjct: 337 ---KLDMTVWTIDLQNVTFHNQLGTQAERIERIAAVAGALAEVTGVDARQAKDAALLAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +++V EFPELQG +G+ Y EEH P GP ++VPT +S+TV+LA Sbjct: 394 DLSSQMVYEFPELQGLMGRYYLEAAGMRAELAAVAEEHYSPLGPSDDVPTAPLSVTVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---------- 530 DKLDTL +FWAI+EKP+GSKDP+ALRRA LG+IR+IL N + + L + Sbjct: 454 DKLDTLTSFWAIDEKPTGSKDPFALRRAALGVIRLILTNDLRLSLKETFASALRILLKLP 513 Query: 531 -------------------------------------------DQNLILFFHDRLKLYLH 547 +L+ FFHDRLK++L Sbjct: 514 EWQAALLDAKAKQATAEDKDAAAQQVHGLAHQVEAANALVASVPGDLLSFFHDRLKVFLR 573 Query: 548 DRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK 606 D IRHD+I+A + ND+L +V + LN ++ GE + KR IL+ E+K Sbjct: 574 DEGIRHDIIDACIAMDGNDDLNLLVKRARALNAVIATEDGENLVQGFKRANNILSQAEEK 633 Query: 607 NR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 + E S ++ ++EK L+A + I +++ + + + ++ P++ FF Sbjct: 634 DGVEYSYGPDIKFAETDSEKALFAALDGAQAKIDLALEAEDFPTAMTAMAALRAPVDAFF 693 Query: 666 DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + V VN D+ +R NRL+LL I+ I V ++ KI Sbjct: 694 EDVQVNSDNDILRRNRLNLLNQIRQICADVADLTKI 729 >gi|119773167|ref|YP_925907.1| glycyl-tRNA synthetase subunit beta [Shewanella amazonensis SB2B] gi|166227923|sp|A1S1I1|SYGB_SHEAM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|119765667|gb|ABL98237.1| Glycine--tRNA ligase [Shewanella amazonensis SB2B] Length = 689 Score = 600 bits (1548), Expect = e-169, Method: Composition-based stats. Identities = 215/722 (29%), Positives = 346/722 (47%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + AE L + + ++++ Y P RL LY+KGL+ Sbjct: 5 NLLIEIGTEELPPKALRTLAESFQANFSEELTKAELPFESIEWYAAPRRLALYVKGLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QEDKVVEKRGPAVQSAFDADGNPTKAAEGWARGNGITVAEAERLATD--KGEWLVYRANV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++ + A+ K+P PK MRW + ++ +IRP+ ++ +L +E + Sbjct: 123 AGEPTSVLVPAMTQRALDKLPIPKPMRWGS-----NSTQFIRPVHTVTLLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I ++ I GHRF + D+Y+ L+ V+ D + R+ I DA + Sbjct: 173 IAGEVLGIQSDRTIRGHRFMGESSFSLDHADNYLAALKERGKVIADYQARKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G ++ LLEE+ LVEW V F++K+L +P E + T+K +QK F + Sbjct: 233 AAAVIGGNADIEESLLEEVASLVEWPVVLTAHFEEKFLAVPAEALVYTMKGDQKYFPVFS 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ Sbjct: 293 NDGKLLPNFIFVANIESKD-PAQIIAGNEKVVRPRLADAEFFFNTDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L R+A L+ VVF ++GT +R RI L IA I A RA Sbjct: 339 -------KHTLASRLASLET--VVFQKQLGTLKDRAERISALAGFIAGQIGASSEDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ ++VP+ +S Sbjct: 390 GLLSKCDLMTNMVMEFTDTQGTMGMHYARLDGEAEAVAVALEEQYKPKFSGDSVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LA+KLDTL + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 450 CAVALAEKLDTLSGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLIAKAVE 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + D+ I D+I A+L D I ++ Sbjct: 510 LHGSNLSNALAADEVLEFLMGRFRAWYQDKGISTDVILAVLARRPTRPADFDDRILAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K E+ I+ L AEK L A +++ I Sbjct: 570 FRTLEQAAALAAANKRVSNILA---KVEGELPSSINDALLSEAAEKALAAKLAEVTPVIA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y Q L ++ E ++ FF+ V+V DD+ +R+NRL+LL +++ L V ++ Sbjct: 627 PLFAAGNYQQALTELAALRESVDQFFEDVMVMADDQALRNNRLALLGNLRDQFLHVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|53803631|ref|YP_114481.1| glycyl-tRNA synthetase subunit beta [Methylococcus capsulatus str. Bath] gi|53757392|gb|AAU91683.1| glycyl-tRNA synthetase, beta subunit [Methylococcus capsulatus str. Bath] Length = 693 Score = 600 bits (1547), Expect = e-169, Method: Composition-based stats. Identities = 222/727 (30%), Positives = 353/727 (48%), Gaps = 64/727 (8%) Query: 1 MP---DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M D L E+ +EE+P + K +E L + L++ G+ Y + Y TP RL L ++ Sbjct: 1 MAETRDLLFELGTEELPPKSLLKLSEALKDHVAAGLEKAGLSYAGIEAYATPRRLALLVR 60 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 L+ P++ ER GP + GA KA +GF RS G+ T +K +KG+ Sbjct: 61 RLAAAQPDQTIERRGPALNAAYDAQGAPTKATEGFARSCGVTTDQLITLK--TEKGEWVG 118 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 V R E ++ I+ A+ +P K MRW + + ++RP++ ++ + Sbjct: 119 VVQEIRGRSTEALIPDIIRQALTALPIAKRMRWGSGLA-----EFVRPVQWVVLLYGG-- 171 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAIL 229 +++ ++ + G T GHR HAP PI++ + Y L VL D RR I Sbjct: 172 ---TVVECEILGVASGRTTRGHRCHAPDPIEITNPTEYAGLLTTRGHVLPDFGERRACIE 228 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A A+ V + + D DLL+EI LVEW +G F+ +YL LP E++ T++ NQK Sbjct: 229 RLAVETAATVNGKPLIDPDLLDEITALVEWPVPVLGGFEARYLSLPPEVLITTMQDNQKY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F EG L FI SNI + + +GN RVV RL DA FW +D+ Sbjct: 289 FPVVDAEGGLLPHFITFSNIDSR-RPEFVREGNERVVRPRLADAEFFWNQDR-------- 339 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 + L++R+ L V F K+G+ ++ R++ L IA+ ++ D + Sbjct: 340 ------------KRTLEERVEELGQ--VTFQNKLGSVLDKTRRVQQLAVFIAESLNVDPS 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V+RA +L+KADL T +V EF ELQG +G+ YA+ + E AIEE P+ +P Sbjct: 386 FVERAALLAKADLLTHMVGEFTELQGLMGRYYALAEGEPYEVALAIEEQYLPKVSGGALP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 ++ ++LA+K+DTL +++ PSG +DPYALRRA LGIIRI++E ++D+ + + Sbjct: 446 ASRTGEILALAEKIDTLAGIFSVGLVPSGDRDPYALRRAALGIIRILIEKRLDLDVEVLL 505 Query: 530 E---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 E L+ F ++RL+ Y ++ RHD EA+L NL +D + Sbjct: 506 EKALNLLPHGFDPEATRSALLDFIYERLRGYCLEQGYRHDEFEAVLAIRPTNLADFLDRL 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + EF E + KRI IL K + + L+ +EK L A Sbjct: 566 AAVREFRGLTAAESLAAANKRIRNILR---KSGETVVANAEERILIEPSEKALLAAARQA 622 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I + + Y L + + ++ FFD V+V +D +R NRL LL ++ + L Sbjct: 623 HADILPLLHARDYTTALCRLAQLRDCVDAFFDTVMVMCEDVSLRSNRLGLLALVEGLFLN 682 Query: 695 VINVQKI 701 V ++ + Sbjct: 683 VADISTL 689 >gi|83589468|ref|YP_429477.1| glycyl-tRNA synthetase, beta subunit [Moorella thermoacetica ATCC 39073] gi|123725759|sp|Q2RKV5|SYGB_MOOTA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|83572382|gb|ABC18934.1| glycyl-tRNA synthetase beta chain [Moorella thermoacetica ATCC 39073] Length = 694 Score = 600 bits (1547), Expect = e-169, Method: Composition-based stats. Identities = 224/733 (30%), Positives = 347/733 (47%), Gaps = 71/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D + EI +EEIPAR + A E ++ + LL+E + Q + Y TP RL LYL L Sbjct: 1 MARDLIFEIGTEEIPARFMNPALEQMAAVASQLLQEYRLPCQKVATYGTPRRLALYLTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E ++E GP V G KA GF RS G+ + ++ G A+ Sbjct: 61 AENQEELVQEIKGPPVKAAFTADGQPTKAALGFARSMGVAVEE--LVTREYNGGQYVFAI 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 R+ R VL ++ + + +PK MRW + + RP++ +L + +E Sbjct: 119 KREQGRPAVTVLPELLLAVVNALSFPKPMRWGSLE-----IRFARPIRWLLALFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I ++L + N TYGHRF AP P +V + Y + LEE VL+D RR I Sbjct: 171 --VIPVELAGLTASNQTYGHRFLAPGPHQVPTASAYFQVLEENYVLVDQHRRRQLIWEQI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LAS G + +D +LLEEI LVE+ G FD +YL LP+E++ ++ +Q+ F Sbjct: 229 TGLASREGGRVEKDPELLEEITYLVEYPTALAGHFDPEYLKLPQEVVITPMRDHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI V N +D I +GN RV+AARL DA F++ D+ Sbjct: 289 WNAQGELLPRFITVHNG-TADHLENISRGNERVLAARLADAAFFYQEDRQ---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---A 409 PL ++ +L+ ++VF +GT + R++ L + +D Sbjct: 338 ----------TPLAAKVPKLE--EIVFQESLGTMLAKTRRLQRLAVNLVNTLDLPAELVP 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 LV+R L+KADL T +V EFPELQG +G YA E C I +H PR + +P Sbjct: 386 LVERTAELAKADLVTAMVYEFPELQGIMGSYYAAHDGERAEVCQGIRQHYWPRFAGDRLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS--- 526 + + V LAD+LDTL+ + P+GS+DPYALRR G++ I +E + L+ Sbjct: 446 DSLTGMVVGLADRLDTLVGCFGAGLIPTGSQDPYALRRQATGVVTIAVEFNLKFSLTASI 505 Query: 527 ------------QFIEDQN-----LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 Q + L+ F RL+ L ++ R+D+I+A L +D+L Sbjct: 506 AAAYEGYTAGGIQLARPLDVVQEQLVQFCRQRLEHLLEEKGYRYDVIQACLAAGSDDLAA 565 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L+ F + R F + +K + P+ L +AE LY Sbjct: 566 AYHRTRDLSAFREEEGFAALQTAFTRAFNLARQAREK-----YHLRPEALQEKAEAELYR 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + + + Y + ++ PI+ FFD VLV D EVR+NRL+LLQ I Sbjct: 621 ALMETRHQAEPRLRAGDYLAALKAMAALRGPIDAFFDNVLVMAPDMEVRNNRLALLQAIV 680 Query: 690 NIILIVINVQKIV 702 N++ + + ++V Sbjct: 681 NLVFQIADFSRLV 693 >gi|84499656|ref|ZP_00997944.1| glycyl-tRNA synthetase beta subunit [Oceanicola batsensis HTCC2597] gi|84392800|gb|EAQ05011.1| glycyl-tRNA synthetase beta subunit [Oceanicola batsensis HTCC2597] Length = 739 Score = 600 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 261/763 (34%), Positives = 386/763 (50%), Gaps = 88/763 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA DL + L E G+ Y + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAADLKSRMTDGLVEAGLTYGGAASFHTPRRLCLAIEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPRV A +KAI+GFLR G+ +D KKG VY+A++ +P R Sbjct: 61 TESPTLREERKGPRVDAPEKAIEGFLRGAGVAKEDLQ--VRDDKKGQVYVALIERPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + + W+RPL SILCIL E + ++L Sbjct: 119 AEIVAEVLTSVIRNFPWPKSMRWGSG-----SLKWVRPLHSILCILSDES-GAATVPIEL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + + T+GHRF AP V + Y L+ A V+LD + R + I DA LA A G Sbjct: 173 DGLTATDRTHGHRFMAPGAFSVTGFEDYTTKLKRACVVLDAQERADHIWQDATNLAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVEW V MG D+++L LP E+++ ++K +QK F R Sbjct: 233 LEVVEDRGLLSEVAGLVEWPVVLMGDIDQEFLGLPPEVLQTSMKEHQKFFSVRNARTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V+AARL DA FW+ D Sbjct: 293 EKFITVANRETADDGATILAGNQKVLAARLSDARFFWENDLRIARTAG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 ++ +ARL +V FH K+G+Q R+ RI L + IA +DAD AL ++A ++KA Sbjct: 341 ----MEDWVARL--ANVTFHNKLGSQAARIDRIAALARDIAPTVDADPALAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A EEH P GP + VP+ +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPDQVARAAEEHYSPLGPSDAVPSAPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---------- 530 DK+D L FW+I+EKP+GSKDP+ALRRA LG+IR++L N + + L +F + Sbjct: 455 DKIDLLTGFWSIDEKPTGSKDPFALRRAALGVIRLVLANGLRVDLDRFFDAQILRHRLSD 514 Query: 531 ----DQNLILFFHDRL----------KLYLHDRDIRHDLIEAILRPEN----DNLLTIVD 572 DQ L+ ++ + L + + A+ + D L D Sbjct: 515 GAAADQALLDDLLGKIAHHGMSGAPVRALLDSVEDAPGWLAAVSEHDPELGADLLAFFHD 574 Query: 573 LIK-----------HLNEFFSSAKGEKFL----------------------LSAKRIFQI 599 +K ++ + + KR I Sbjct: 575 RLKVHLRDEGIRHDVIDVAIAMPEKSDLALVVQRAEALSAFLRTEDGENLVQGFKRANNI 634 Query: 600 LAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 L E K+ P++ +E L+ + I+ +M + + L ++ Sbjct: 635 LTQAEDKDGVAYEFGADPKFAEDASETALFEALERVRPRIETAMAQEEFEAALSDLATLR 694 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FF+ V VN ++ VR NRL+LL I+ L V ++ ++ Sbjct: 695 APIDAFFEAVQVNAENEIVRRNRLNLLSTIRTTCLAVADLTRL 737 >gi|107099002|ref|ZP_01362920.1| hypothetical protein PaerPA_01000008 [Pseudomonas aeruginosa PACS2] gi|218888754|ref|YP_002437618.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa LESB58] gi|226737058|sp|B7V0P3|SYGB_PSEA8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218768977|emb|CAW24735.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa LESB58] Length = 684 Score = 600 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 206/725 (28%), Positives = 338/725 (46%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + E + LK G+ Y R Y P RL + ++ Sbjct: 1 MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLSYAAARFYAAPRRLAVLVEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF + G+ +++ K G Sbjct: 61 LAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVD------LQQIDKSGPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L IV ++ ++P PK MRW+ ++RP + ++ + Sbjct: 115 SQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDDVVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+N+++ IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDANGKLLPRFITVANVESK-APENIVSGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT E+ R+ L IA+ I + Sbjct: 334 ----------KQPLESFNERLR--NVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 382 SRAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------ 525 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNA 501 Query: 526 ---------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + +++ + + L ++ Sbjct: 502 AVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KR+ ILA K E+ + L+ AEK L + +++ + Sbjct: 562 VQAFRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAES 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V Sbjct: 619 EVAPLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|15595206|ref|NP_064728.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa PAO1] gi|25009339|sp|Q9I7B8|SYGB_PSEAE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|9945826|gb|AAG03398.1|AE004440_8 glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa PAO1] Length = 684 Score = 600 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 206/725 (28%), Positives = 339/725 (46%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + E + LK G+ Y R Y P RL + ++ Sbjct: 1 MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLSYAAARFYAAPRRLAVLVEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF + G+ +++ K G Sbjct: 61 LAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVD------LQQIDKSGPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L IV ++ ++P PK MRW+ ++RP + ++ + Sbjct: 115 IQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDDVVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+N+++ IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDANGKLLPRFITVANVESK-APENIVSGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT E+ R+ L IA+ I + Sbjct: 334 ----------KQPLESFNERLR--NVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 382 SRAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------ 525 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNA 501 Query: 526 ---------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + +++ + + L ++ Sbjct: 502 AVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KR+ ILA K E+ + L+ AEK L + +++ + Sbjct: 562 VQAFRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAES 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V Sbjct: 619 EVAPLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|116053728|ref|YP_788163.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa UCBPP-PA14] gi|254237749|ref|ZP_04931072.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa C3719] gi|254243121|ref|ZP_04936443.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa 2192] gi|122262137|sp|Q02V73|SYGB_PSEAB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|115588949|gb|ABJ14964.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa UCBPP-PA14] gi|126169680|gb|EAZ55191.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa C3719] gi|126196499|gb|EAZ60562.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa 2192] Length = 684 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 206/725 (28%), Positives = 338/725 (46%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + E + LK G+ Y R Y P RL + ++ Sbjct: 1 MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLSYAAARFYAAPRRLAVLVEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF + G+ +++ K G Sbjct: 61 LAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVD------LQQIDKSGPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L IV ++ ++P PK MRW+ ++RP + ++ + Sbjct: 115 SQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDDVVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+N+++ IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDANGKLLPRFITVANVESK-APENIVSGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT E+ R+ L IA+ I + Sbjct: 334 ----------KQPLESFNERLR--NVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 382 ARAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------ 525 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNA 501 Query: 526 ---------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + +++ + + L ++ Sbjct: 502 AVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KR+ ILA K E+ + L+ AEK L + +++ + Sbjct: 562 VQAFRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAES 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V Sbjct: 619 EVAPLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|296386480|ref|ZP_06875979.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa PAb1] Length = 684 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 206/725 (28%), Positives = 338/725 (46%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + E + LK G+ Y R Y P RL + ++ Sbjct: 1 MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLGYAAARFYAAPRRLAVLVEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF + G+ +++ K G Sbjct: 61 LAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVD------LQQIDKSGPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L IV ++ ++P PK MRW+ ++RP + ++ + Sbjct: 115 SQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDDVVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+N+++ IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDANGKLLPRFITVANVESK-APENIVSGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT E+ R+ L IA+ I + Sbjct: 334 ----------KQPLESFNERLR--NVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 382 ARAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------ 525 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNA 501 Query: 526 ---------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + +++ + + L ++ Sbjct: 502 AVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KR+ ILA K E+ + L+ AEK L + +++ + Sbjct: 562 VQAFRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAES 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V Sbjct: 619 EVAPLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISLL 683 >gi|304309658|ref|YP_003809256.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium HdN1] gi|301795391|emb|CBL43589.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium HdN1] Length = 691 Score = 597 bits (1540), Expect = e-168, Method: Composition-based stats. Identities = 214/721 (29%), Positives = 356/721 (49%), Gaps = 62/721 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ +EE+P + + E + + L +G+ ++++R +P RL + + L+ Sbjct: 10 DLLIELGTEELPPKALSRLMESFAHSIREYLGAQGLAFESVRPLASPRRLAVIVSALAGQ 69 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP R G KA GF RS G++ + IK D KG+ Sbjct: 70 QADQTVEKKGPTLVAAYDREGNPSKAAIGFARSCGVEFDALESIKTD--KGEWLFHRSSH 127 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +++++ ++ A+ ++P PK M W + + ++RP ++ + ++ Sbjct: 128 KGRALDEIVGPMIKSALDQLPIPKRMHWGSRRAL-----FVRPAHWLVVLY-----GNRV 177 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + + G +YGHRFHAP I ++S Y L+ A V+ D RR I AHR+ Sbjct: 178 LPCEALGLTAGRTSYGHRFHAPDAITIESPSSYEAQLQHAYVVADFFARRTQIAESAHRI 237 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G L +LL+E+ GLVEW +G+FD ++L +P+E + T+++NQK F Sbjct: 238 ANEMGATLSIAAELLDEVTGLVEWPIPLVGNFDPEFLSVPQEALISTMESNQKYFPLFDN 297 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N FI ++NI+++ ++ GN RVV RL DA F++ DQ Sbjct: 298 TGKLLNRFITIANIESTH-PDRVIAGNERVVRPRLSDARFFFETDQ-------------- 342 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 + L+ VVF ++G+ E+ R L ++IAQ+I + L RA Sbjct: 343 ------KQRLEDHAE--LQQKVVFEKQLGSVDEKSVRNSALAREIAQVIGGEPGLAKRAG 394 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL + +V EFPELQG +G+ YA+ Q E AI EH PR + +P Sbjct: 395 RLAKADLASNMVGEFPELQGVMGEYYALGQGEPKDVATAIREHYLPRYSGDAMPATLTGS 454 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LADK+D+LI I + PSG KDPYALRRA +G++RI++EN+ I LS E Sbjct: 455 AVALADKVDSLIGILGIGKIPSGDKDPYALRRAAIGVLRIVVENRFGISLSMLAEASISL 514 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 Q+ + F R+ Y ++ I D + A+L +D I++ + EF Sbjct: 515 YSSRLTNPNVKQDFLEFIRARIPGYFAEQGIASDTVRAVLAVSSDAPSDIMERAIGVTEF 574 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ IL EK+ S + L AE L+ +++ + Sbjct: 575 RTYPEAAALAAANKRVRNIL---EKRTDNGSQAVDGALLKESAEVELFHRLAETREKLTT 631 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 Y L + P++ FF++VLVN + EVR NRL+LL ++ + L + ++ + Sbjct: 632 L--RGNYSAQLKTLAELRTPVDNFFEKVLVNAESPEVRTNRLNLLANLQELFLGIADIAE 689 Query: 701 I 701 + Sbjct: 690 L 690 >gi|330806669|ref|YP_004351131.1| glycine--tRNA ligase, beta subunit (glycyl-tRNA synthetase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327374777|gb|AEA66127.1| Glycine--tRNA ligase, beta subunit (Glycyl-tRNA synthetase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 683 Score = 597 bits (1540), Expect = e-168, Method: Composition-based stats. Identities = 204/723 (28%), Positives = 337/723 (46%), Gaps = 67/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + A+ + L+ G+ Y+ + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKALNTLADAFLAGIDKGLQAAGLGYEAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSINLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P PK MRW+ ++RP + ++ +L Sbjct: 115 SQSIKGKPTASLLPTIVEDSLNDLPIPKRMRWAARKE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++ID + G + GHRFH P +++ S +Y+ DL A VL D RR I Sbjct: 165 GDQVIDCTILAQKAGRDSRGHRFHHPQSVRITSPANYLADLRAAYVLADANERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + +LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TEELATLQEGTAIVPANLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKD-PQQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF K+G+ ++ R+ L IA I D Sbjct: 334 ----------KQPLESFNERLR--NVVFQEKLGSVYDKAERVSKLAAFIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +PT Sbjct: 382 ARAGILSKCDLSTEMVGEFPEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI+++ ++D+ L+ + Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKQLDLDLNDAVAF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F DRL+ D + ++ + + L ++ Sbjct: 502 AVNAFGSKVKSAGLADAVLEFIFDRLRARYEDEGVEVATYLSVRALKPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E + + +Y AE L + I Sbjct: 562 VQAFRKLPEAAALASVNKRVSNLLSKAEPSVK----AVEARYFDNAAEFSLNSAIQQAYA 617 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q M+ + Y + L ++ EP++ FF+ V+VN D+ +VR NR +LL ++++ L + Sbjct: 618 SVQPLMEKRDYAEALARLAALREPVDAFFEAVMVNADNEDVRKNRYALLARLRSLFLNIA 677 Query: 697 NVQ 699 ++ Sbjct: 678 DIS 680 >gi|260886751|ref|ZP_05898014.1| glycyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] gi|330839432|ref|YP_004414012.1| glycyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] gi|260863603|gb|EEX78103.1| glycyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] gi|329747196|gb|AEC00553.1| glycyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] Length = 688 Score = 597 bits (1539), Expect = e-168, Method: Composition-based stats. Identities = 216/730 (29%), Positives = 340/730 (46%), Gaps = 72/730 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI +EEIPA ++L LKE + + +R TP RL L ++GL Sbjct: 1 MSKDLLLEIGTEEIPAHAMPGMLKELGENAKKALKELRLAHGAVRTLGTPRRLALVVEGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE+ GP V G KA +GF R G++ + +D A+ Sbjct: 61 AEKQEDVAEEKRGPSVQVAFDAAGKPTKAAEGFARGQGIKAQD--LVVRDG----YVYAL 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + E VL ++P I +P P SMRW F +IRPL+ ++ + Sbjct: 115 VEEAGESAEKVLAKMLPELISGLPLPNSMRWGDLD-----FRFIRPLRWLVALY-----G 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I+ +L + GN + GHRF + ++ HY E+A V++DP R+ I Sbjct: 165 DRIVPFELACVKSGNTSRGHRFLSTGDFTIEDAAHYEEACEKAFVIVDPARRKALIEEGL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A A G +LLEE++ LVE+ GSF+ KYL LP + + ++ +Q+ F Sbjct: 225 VEAAKAHGGTAEITPNLLEEVLYLVEYPTALAGSFEDKYLALPPDAVITPMRDHQRYFPV 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++ +G L F+ V N + + GN RV+ ARL DA F+ D+ Sbjct: 285 KSADGKLLPLFLTVRNGG-KEYLETVQHGNERVLRARLADAQFFFDEDR----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 K L + + +L VVF +GT ++ R+ L KIA IDA + Sbjct: 333 ---------KKSLAEHLEKLKT--VVFQEGLGTVYDKSLRLEKLAGKIADAIDANDAEKK 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSKADL T +V EF ELQG +GKEYA L E AI+EH PR + P Sbjct: 382 AAMRAALLSKADLVTGMVTEFTELQGVMGKEYARLDGEGEDVALAIDEHYMPRFAGDAQP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + VSLADK+D ++ ++ P+GS+DP+ALRR LG++ I+E + I L + Sbjct: 442 KTRAGLVVSLADKMDNIVATFSRGLIPTGSQDPFALRRQALGMVHSIIEAGVAISLHDLV 501 Query: 530 E-----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ F RLK L + IR+D+ +A+L D++ ++ Sbjct: 502 DWTMDLLKITDAAVCEKMQADVADFMRLRLKNVLAEEGIRYDIADAVL-GNVDDVRRVLL 560 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K + E ++ + + R+ + A EK + + EK L + Sbjct: 561 AAKAVREQLAAPGMADAVQAFVRVANLAAKAEKGEVH----VDAALFETDEEKELMKAYT 616 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + ++ + D + EPI FFD V+V DD ++R NRLSLL+ I +++ Sbjct: 617 SARSAAESLIEAHDFVGAIDDFKDLAEPINAFFDAVMVMADDEKIRRNRLSLLKGIDDLL 676 Query: 693 LIVINVQKIV 702 + KIV Sbjct: 677 REAADFSKIV 686 >gi|83945361|ref|ZP_00957709.1| glycyl-tRNA synthetase beta subunit [Oceanicaulis alexandrii HTCC2633] gi|83851195|gb|EAP89052.1| glycyl-tRNA synthetase beta subunit [Oceanicaulis alexandrii HTCC2633] Length = 711 Score = 597 bits (1539), Expect = e-168, Method: Composition-based stats. Identities = 248/751 (33%), Positives = 398/751 (52%), Gaps = 92/751 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FL EI+ EEIPARMQ +A EDL+ ++ LKE G+ + ++ + P RL + ++GL Sbjct: 1 MAQFLFEIFCEEIPARMQARAEEDLARLMSDRLKEAGLKWDSLEAFSGPRRLGVVIEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + + EER GPR A +KA++GF+R G+ ++ C+I+ + KKG Y+AV+ KP R Sbjct: 61 LKTEDVREERKGPRTDAPEKALEGFMRGAGITSLDQCKIE-EGKKGSFYIAVIEKPGRET 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ +P ++ PWPKSM++ + W+RPL+S++ +L ++I ++ Sbjct: 120 AEVIAEAIPDILKSFPWPKSMKFGKGETAQ---RWVRPLRSLISLLDG-----QVIKTEV 171 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G++T GHR H P V+ Y L + V+L + R+ +L+ A R+ G Sbjct: 172 FGINSGDVTDGHRIHGSGPFSVRDFADYEAKLRKNGVILRRDERKQLVLDGARRVCEEAG 231 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 LEL+ED+ LLEE+ GLVE +G D +L LP E+I LT+KT+QK F R + L Sbjct: 232 LELIEDQGLLEEVTGLVEHPAPILGDMDPDFLDLPPEVIALTMKTHQKYFAVRDPKSQRL 291 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 + F++++N A DGG AI GN+RV++ARL DA HFW D+ Sbjct: 292 TSKFVVLANQDAPDGGKAIAAGNARVLSARLSDARHFWDLDR------------------ 333 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L+ + L V FH K+G+ ++V R+ L +++A ++ AD + ++A L+K Sbjct: 334 --KTGLEAMASELG--KVTFHEKLGSVADKVERVAKLARELAPVVGADADMAEKAARLAK 389 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL +++V EFPELQG +G+ YA+ + DAI++H KP+GP ++VPT +S V+L Sbjct: 390 ADLVSQMVYEFPELQGAMGRYYALDAGLDPQIADAIKDHYKPQGPSDDVPTAPVSAAVAL 449 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI---------- 529 ADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG+IRI+L+ + L + Sbjct: 450 ADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVIRILLDGDYRLALKKLFSPTVLDSAGG 509 Query: 530 ----------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + +L+ F DRLK++L D ++HD+I+A+ +D+L+ + + L Sbjct: 510 DGGVQGDMIAKRDDLLAFCADRLKVHLKDEGVKHDVIDAVFALGDDDLVRVTKKARALQA 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREI-----------SLEISPQYLL-------L 621 F +S G+ L +R IL EEKK ++ + ++ Sbjct: 570 FMNSDDGQALLQGYRRAANILTAEEKKGFDLASARAEAVSGSDKDTDAALMIAIAKTADA 629 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 E+ L A I ++ + + L + EP++ FF+ V+VN +D Sbjct: 630 AEERALIAAIEGADEVASVALTSEDFEGAMSALSQLREPVDAFFEAVVVNAED------- 682 Query: 682 LSLLQYI-----------KNIILIVINVQKI 701 + + V + ++ Sbjct: 683 ----SMVRRNRLLLLSRIRAAADQVADFSRL 709 >gi|90581119|ref|ZP_01236918.1| glycyl-tRNA synthetase beta subunit [Vibrio angustum S14] gi|90437640|gb|EAS62832.1| glycyl-tRNA synthetase beta subunit [Vibrio angustum S14] Length = 689 Score = 597 bits (1539), Expect = e-168, Method: Composition-based stats. Identities = 217/723 (30%), Positives = 342/723 (47%), Gaps = 62/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FL+E+ +EE+P AE + LK + + ++ Y P RL L + GL+ Sbjct: 4 KNFLIELGTEELPPTALRTLAEAFATNFEAELKAADLPHDGIKWYAAPRRLALKVTGLAE 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + P+K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 64 NQPDKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGITVDQAERMVTD--KGEWLLFKQE 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + +L + A+ K+P P+ MRW + +IRP+K++ +L ++ Sbjct: 122 VKGQPAQTLLPELAAAALAKLPIPRPMRWGDKET-----QFIRPVKTLTMLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAH 233 +I+ + + GHRF + + D Y LE V+ D E R+ IL DA Sbjct: 172 LIEGTILGVASARTIRGHRFMGEAEFTIDNADQYPAILEERGKVMADYEARKAIILADAK 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A AVG + DL+EE+ LVEW V SF++++L +P E + T+K +QK F Sbjct: 232 KAAEAVGGIADLEDDLVEEVTSLVEWPVVLTASFEEEFLKVPSEALVYTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI VSNI ++D + I+ GN +VV RL DA F+ D Sbjct: 292 DAEGKLVPKFIFVSNIISND-PSQIISGNEKVVRPRLADAEFFFNTD------------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L L R+ +L+ +F ++GT ++ RI L IA I ADV R Sbjct: 338 -------LKSKLIDRLPQLETA--IFQKQLGTIKDKTDRITELAGYIADKIGADVDNAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 389 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEDVALALNEQYMPRFAGDQLPSTPV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN D+ L + Sbjct: 449 SSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYDLDLVDLVAKAH 507 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 D ++I F R + + D D+I+A+L +K ++ Sbjct: 508 SLFGDKLTNNNVDSDVIEFMLGRFRAWYQDAGFSIDVIQAVLAMHPTQPADFDKRVKAVS 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F E + KR+ ILA K + E+ + L+ AEK L +S + Sbjct: 568 HFRELDAAESLAAANKRVGNILA---KFDGELPTTVDNSLLVEAAEKELAEKVSAVVAAL 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y L S+ EP++ FFD V+V DD +++ NRL+LL ++N L V ++ Sbjct: 625 EPVFATGDYQTALTELASLREPVDAFFDNVMVMADDEKLKVNRLALLNLLRNQFLKVADI 684 Query: 699 QKI 701 + Sbjct: 685 SLL 687 >gi|313111470|ref|ZP_07797271.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa 39016] gi|310883773|gb|EFQ42367.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa 39016] Length = 685 Score = 597 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 206/725 (28%), Positives = 335/725 (46%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + E + LK G+ Y R Y P RL + ++ Sbjct: 2 MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLSYAAARFYAAPRRLAVLVEQ 61 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF + G+ I K K Sbjct: 62 LAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGV---DLQHIDKSGPK---LRF 115 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L IV ++ ++P PK MRW+ ++RP + ++ + Sbjct: 116 SQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQWLVMLF----- 165 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 166 GDDVVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKR 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 226 VAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI V+N+++ IV GN +VV RL DA F+K+D+ Sbjct: 286 LLDANNKLLPRFITVANVESK-APENIVSGNEKVVRPRLTDAEFFFKQDK---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT E+ R+ L IA+ I + Sbjct: 335 ----------KQPLESFNERLR--NVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNA 382 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 383 ARAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPST 442 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------ 525 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L Sbjct: 443 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNA 502 Query: 526 ---------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + +++ + + L ++ Sbjct: 503 AVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQA 562 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KR+ ILA K E+ + L+ AEK L + +++ + Sbjct: 563 VQAFRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAES 619 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V Sbjct: 620 EVAPLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVA 679 Query: 697 NVQKI 701 ++ + Sbjct: 680 DISLL 684 >gi|85708600|ref|ZP_01039666.1| glycyl-tRNA synthetase beta subunit [Erythrobacter sp. NAP1] gi|85690134|gb|EAQ30137.1| glycyl-tRNA synthetase beta subunit [Erythrobacter sp. NAP1] Length = 683 Score = 597 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 251/717 (35%), Positives = 359/717 (50%), Gaps = 52/717 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ EEIPARMQ A ++L + ++ GV N+ + TP RL L + L Sbjct: 1 MADFLLELRCEEIPARMQAGARKELDKLFRREMEAAGVAVGNLTIFSTPRRLALIARDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GP VGA +A+DGF R G+ S +++ K + AV+ KP + + Sbjct: 61 KETEAVREEAKGPPVGAPDQAVDGFCRKNGVTRESLE--EREVKGRATWFAVIEKPGQAV 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D+L +P I WPKSMRW + W+RPL I+ +L E ++ Sbjct: 119 ADLLAAAIPAIISDFSWPKSMRWGDASISSESTRWVRPLSGIVALLDGE-----VVPCVT 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G +T GHRFH+ I + D Y L + V++D E R N I A A+ G Sbjct: 174 DGMASGRVTMGHRFHSDGGIPIDDADDYAPRLRDEYVIVDHEERANIIREGASNAAADAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L+LVED+ L+ E GL EW +G FD+ +L +P E+I+LT + NQK FV +G LA Sbjct: 234 LKLVEDEGLVIENAGLTEWPVPLLGRFDEAFLDVPPEVIQLTARVNQKYFVCEDADGELA 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FI +NI + D +V GN +V+AARL DA FW+ DQ Sbjct: 294 NAFICTANIASVD-PTGVVDGNRKVLAARLADARFFWELDQ------------------- 333 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI---AQLIDADVALVDRAIVL 417 K L + L+ + FH K+GT ++V R+ L + A+ + D L A L Sbjct: 334 -KKTLAEHAKGLER--ITFHEKLGTVADKVDRVAKLASWLVFDAKEPNGDHQLTRTAAEL 390 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SKADL TE+V EFPELQG +G YA + + DA+ +H KP G ++VPT ++ V Sbjct: 391 SKADLVTEMVGEFPELQGLMGGYYAQKEGQPQEVADAVRDHYKPVGQGDDVPTAPTTVAV 450 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN---- 533 SLADKLD L++F+ I+ P+GSKDP+ALRRA LG IR++ N + + L Q + + Sbjct: 451 SLADKLDNLLSFFKIDILPTGSKDPFALRRAALGYIRLVQANGLKLSLDQVVHAWDSQPN 510 Query: 534 ------LILFFHDRLKLYLHDRDIRHDLIEAILRPEND---NLLTIVDLIKHLNEFFSSA 584 L F HDRL + L D +RHD I A + + + L F S Sbjct: 511 QSLAEKLTEFLHDRLAVQLRDEGVRHDFIRASRDWSGSIDMRIDRVEARARALTRFLGSD 570 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 G L KR IL EE + +E+S AEK L I+ +++ Sbjct: 571 DGTNLLAGYKRAANILKKEEWEAKEVSYSP------EPAEKALIDAINAAAPKAAAAVNE 624 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +R+ L ++ PI+ FFD+V VN D+ R RL LL + + V + +I Sbjct: 625 ERFEDAMAALATLRAPIDAFFDEVTVNDDNENKRAARLDLLARFTSAVGQVADFSRI 681 >gi|85374000|ref|YP_458062.1| glycyl-tRNA synthetase beta subunit [Erythrobacter litoralis HTCC2594] gi|84787083|gb|ABC63265.1| glycyl-tRNA synthetase beta subunit [Erythrobacter litoralis HTCC2594] Length = 742 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 256/752 (34%), Positives = 379/752 (50%), Gaps = 63/752 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDFLLE+ SEEIPARMQ A ++L + + GV + + TP RL L + L Sbjct: 1 MPDFLLELRSEEIPARMQAGARDELEKLFRREMDAAGVEAGELTVWSTPRRLALIARDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GP GA +AIDGF R G+ D +D K + Y AV+ KP R + Sbjct: 61 EATQAVREEAKGPPEGAPDQAIDGFCRKNGVT--RDQLEIRDVKGRNTYFAVIEKPGRAV 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +D+L +P I+ WPKSMRW T + W+RPL I+ +L + +++ ++ Sbjct: 119 KDLLAEAIPAIIRDFSWPKSMRWGTASMSTESLRWVRPLSGIVALL-----GDDVVECEV 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G +T GHRFH I + + D Y L V++D E R++ I A ++A+ G Sbjct: 174 HGVTSGAVTLGHRFHHSGDITIGNADDYAMKLRAGHVIVDHEQRQDLIREGAAKVAAEAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR----- 295 L+LVED+ L+ E GL EW +G F++ +L +P E I+LT + NQK FV Sbjct: 234 LKLVEDEGLVIENAGLTEWPVPLLGRFEEDFLQVPPETIQLTARVNQKYFVCHRSPAEAG 293 Query: 296 ---EG-------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 +G LAN FI +NI+A DGGA +V GN +V+AARL DA FW Sbjct: 294 VSDDGGQPHEVPASAGTQQLANAFICTANIEAEDGGARVVDGNRKVLAARLADARFFWDV 353 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLD--QRMARLDML----DVVFHAKIGTQGERVSRI 393 D+ + + F+ L D +R+A L D+V AK GT + ++ Sbjct: 354 DRKKTLAEHAKGLERITFHEKLGTVADKVERVANLARWLVESDIVVPAKAGTSLGQSAKT 413 Query: 394 RVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCD 453 + + L ++A L+KADL TE+V EFPELQG +G YA + D Sbjct: 414 NEIPASAGMTKEELADLTEQAARLAKADLVTEMVGEFPELQGLMGGYYARAEGLPDEVAD 473 Query: 454 AIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII 513 AI +H KP G + VPT +++ VSLADKLDTL +F++I+EKP+GSKDP+ALRRA LG+I Sbjct: 474 AIRDHYKPVGQGDEVPTAPVTVAVSLADKLDTLRSFFSIDEKPTGSKDPFALRRAALGVI 533 Query: 514 RIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVD 572 R++ EN + + Q L+ FF DRLK+ + +RHDLI+A+ D+L+ ++ Sbjct: 534 RLMTENGLRMSAGQ----GELLEFFADRLKVQQREAGVRHDLIDAVFALGGEDDLVRLLA 589 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL------------ 620 + L F + G L KR IL E+ + E L Sbjct: 590 RVHALQAFVQTEDGTNLLAGYKRAANILKKEQW-DAEPEHTGDEDPLENVDDPDMREIYA 648 Query: 621 -----------LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 AEK L + +++ + + L S+ PI+ FF++V+ Sbjct: 649 EAVEKKLSYTPEPAEKALIDALDSAEPKAVATVETEDFAAAMSALASLRAPIDAFFEEVI 708 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN +++ VR RL LL ++ + V + +I Sbjct: 709 VNAEEKHVRAARLDLLARFRDAVHRVADFSRI 740 >gi|158422656|ref|YP_001523948.1| glycyl-tRNA synthetase beta subunit [Azorhizobium caulinodans ORS 571] gi|158329545|dbj|BAF87030.1| glycyl-tRNA synthetase beta subunit [Azorhizobium caulinodans ORS 571] Length = 744 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 295/769 (38%), Positives = 415/769 (53%), Gaps = 95/769 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA+ L ++ L E G++Y+ + + TP RL L + GL Sbjct: 1 MPDLLLELFSEEIPARMQAQAADTLRKLVTDALVERGLLYEGAKAFVTPRRLALAVHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPR+GA + AI GFL+S GL +I +I+ DPKKG+ Y+AV+ +P + Sbjct: 61 GRQADSREERKGPRMGAPEGAIQGFLKSAGLASIDQAKIESDPKKGEFYVAVIERPGKAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ IVP ++ PWPKSMRW W+RPL SI+C E +++ ++ Sbjct: 121 TEVIAEIVPEIVRTFPWPKSMRWG-----TGTMRWVRPLHSIVCTFGTEVEDPEVVRFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G++T GHRF AP P V+ L+ ++ LE A V+ D + R+ ILNDA LA G Sbjct: 176 EGIVSGDVTRGHRFLAPEPFAVRRLEDWMAKLEAAKVVADRDRRKAIILNDAKDLALVHG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW MGSF++++L +P+E+IR TI+ NQKCFV R G L Sbjct: 236 LELVEDEGLLEEVCGLVEWPVTLMGSFEERFLDIPDEVIRATIRANQKCFVLRDPRTGRL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FILVSNI A+DGGAAIV GN RV+ ARL DA FW D+ Sbjct: 296 ANRFILVSNIAATDGGAAIVAGNERVIRARLSDAKFFWDTDRR----------------- 338 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 P+ RM++ D + FH K+G+QG R++RI L ++IA + ADV L ++A L+K Sbjct: 339 ---TPMADRMSKFD--AITFHEKLGSQGARINRIVALAREIAPRVGADVDLTEQAARLAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G+ YA + A EEH KP+GP + VPT +SI V+L Sbjct: 394 ADLLTEVVGEFPELQGLMGRYYAQHEKLPPEVAAACEEHYKPQGPSDRVPTAPVSIAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN-------------------- 519 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRIIL+N Sbjct: 454 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIILDNNLRLPLRPLLVSASRTILGE 513 Query: 520 ----KIDIPLSQFIED-----QNLILFFHDRLKLY-----------LHDRDIRHDLIEAI 559 + + + +L+ RL + + DL + + Sbjct: 514 EHFERHPHDVFRLETIADKVVSDLLQGLARRLANLPADADVESAERVEGMTLSGDLADDL 573 Query: 560 LRPENDNL----------LTIVDLIKHL---NEFFSSAKGEKFLLSA------------- 593 L D L +VD + L ++ + L + Sbjct: 574 LAFFGDRLKVHLRDRGARHDLVDAVFALPGQDDLLLVDRRVAALAAFLETEDGRTLLAGY 633 Query: 594 KRIFQILAIEEKKNREISLEISPQ-YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD 652 +R IL IEEKK+ S L AE+ L A I + +++ + + Sbjct: 634 RRAVNILRIEEKKDGVAYKGPSEAKLLKEPAEEHLAAAIETVKRQVADAVAREDFAAAMG 693 Query: 653 LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + P++ FF+ V VN + +R NRL LL I++ + + +I Sbjct: 694 ALAHLRGPVDAFFEGVTVNAPEAALRINRLKLLDEIRSATRGIADFDRI 742 >gi|86137955|ref|ZP_01056531.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. MED193] gi|85825547|gb|EAQ45746.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. MED193] Length = 741 Score = 596 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 269/764 (35%), Positives = 391/764 (51%), Gaps = 88/764 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y + TP RL L L+GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRMTDGLVEAGLTYAGAAAFSTPRRLTLALEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR GL D +++ KG VY A++ KP R Sbjct: 61 AESPTVREERKGPKVGAPDKAIEGFLRGAGLT--RDQLEERETPKGAVYFALIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL SILC L E+ +++ L++ Sbjct: 119 AEIIAEVLEATIRNFPWPKSMRWGAG-----SLRWVRPLHSILCQLSDEN-GSEVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP I V + Y L+ A V+LDP R+ AI +A A A G Sbjct: 173 DGIKAGTVTQGHRFMAPGEITVSGFEDYAAKLKRANVVLDPVERQEAIWQEAGNQAFARG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDK LL E+ GLVEW V +G D ++L LP E+++ ++K +QK F + + Sbjct: 233 LELVEDKGLLAEVAGLVEWPVVLLGDIDAEFLELPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F V+N + +D GA I+ GN +V++ARL DA FW+ D + + ++ Sbjct: 293 EGFFTVANRETADQGATILAGNQKVLSARLADAKFFWENDLRVAKSETGMEAWTG----- 347 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+GTQ ER+ RI L ++IA ++ AD L ++A ++KA Sbjct: 348 ------------QLSNVTFHNKLGTQAERIDRIAALAREIAPVVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA +A E H P GP ++VPT +S+ V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAEAAGLPQEVANACEMHYSPLGPSDDVPTEPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL------ 534 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + L +F + Q L Sbjct: 456 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENNARMSLDRFFDGQLLRIESAL 515 Query: 535 -----------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 F R +L + DL + +D L Sbjct: 516 DASLPDAGIASLLKEIAEHGVFGAAFRVVRDRLGENAERAFLDLETKVPDLSDDLLSFFH 575 Query: 572 DLIKH---------------------------LNEFFSSAKG------EKFLLSAKRIFQ 598 D +K + + L KR Sbjct: 576 DRLKVFLRDQGIRHDVIDACIAMAGNDDLTLLVKRARALEDFLNSEDGTNLLQGFKRANN 635 Query: 599 ILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL E+K+ E S ++ ++EK L+A + I +++ + + + ++ Sbjct: 636 ILTQAEEKDGVEYSYGADVKFAEDDSEKALFAALEASEGAISAAIEAEDFAAAMGGMAAL 695 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF+ V VN D VR NRL+LL I+ + V ++ +I Sbjct: 696 RGPVDAFFEAVQVNSDKEVVRRNRLNLLSQIRKVCGQVADLSRI 739 >gi|326387506|ref|ZP_08209114.1| glycine--tRNA ligase [Novosphingobium nitrogenifigens DSM 19370] gi|326208010|gb|EGD58819.1| glycine--tRNA ligase [Novosphingobium nitrogenifigens DSM 19370] Length = 668 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 262/704 (37%), Positives = 376/704 (53%), Gaps = 47/704 (6%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFLLE+ SEEIPARMQ +A DL + L+ G+ + + TP RL L + L Sbjct: 6 ADFLLELRSEEIPARMQAQARADLERLFRKELEAAGLTPGEVAVWSTPRRLALVARALPL 65 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 + EE GPR A +A++GFLR TGL +D ++D V+ AVL KP R Sbjct: 66 ATAAVSEELKGPRTSAPPQALEGFLRKTGLS--ADQLTERDG----VWFAVLEKPGRATV 119 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 DVL +P I+ PWPKS RW + W+RPL I+ +L E I+ ++ Sbjct: 120 DVLAAAIPAIIRAFPWPKSQRWGAASLSSESLRWVRPLSGIVALLGGE-----IVPCEVA 174 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 I G T+GHRFH PI + ++ Y L A V++D R + + A + A+ GL Sbjct: 175 GIVAGRETFGHRFHHSGPIAIDGVEDYADKLRAAHVIVDHAEREATVRDGARKAATEAGL 234 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 LVED+ L+ E GL EW +G FD+ +L +P E+I+LT + NQK F+ R G LAN Sbjct: 235 VLVEDEGLVIENAGLTEWPVPLLGRFDEAFLAVPPEVIQLTARVNQKYFICRDAAGKLAN 294 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F+ +NI A DGG AIV GN +V+AARL DA FW++DQ Sbjct: 295 AFVCTANIVAKDGGEAIVAGNRKVLAARLSDARFFWEQDQ-------------------- 334 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---IDADVALVDRAIVLS 418 PL Q+ +L + FH K+GT ++V+R+ L + +A+ AD A A L Sbjct: 335 KTPLAQQAEKL--ARIKFHEKLGTVADKVARVADLAESLARDGVVPGADPAQARLAAELC 392 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G YA ++ + DA+ +H KP G ++VPT +++ ++ Sbjct: 393 KADLVTEMVGEFPELQGLMGGYYARVEGLPDAVADAVRDHYKPVGQGDDVPTAPVTVALA 452 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF 538 LADKLDTL +F+AI+EKP+GSKDP+ALRRA LG+IR+I +N + L + +L+ FF Sbjct: 453 LADKLDTLRSFFAIDEKPTGSKDPFALRRAALGVIRLITDNGLRFGLGE----GDLLAFF 508 Query: 539 HDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 DRLK+ + +RHDLI+A+L D+L+ ++ + L F ++ G L KR Sbjct: 509 ADRLKVQQREAGVRHDLIDAVLALGGEDDLVRLLARVHALQAFVATEDGVNLLAGYKRAA 568 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL E + + E L ++ G ++ + + L S+ Sbjct: 569 NILKKETWEPLPRNYEPDAAEAALA------EALAVAGPKADAAVAAEDFTGAMGALASL 622 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FFD V VN D R NRLSLL + + V + +I Sbjct: 623 RAPIDAFFDDVTVNDADAHKRANRLSLLDLFRAAVHKVADFSRI 666 >gi|94498278|ref|ZP_01304838.1| Glycine--tRNA ligase [Sphingomonas sp. SKA58] gi|94422280|gb|EAT07321.1| Glycine--tRNA ligase [Sphingomonas sp. SKA58] Length = 772 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 264/781 (33%), Positives = 383/781 (49%), Gaps = 91/781 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ EEIPARMQ KA++DL+ + L + G+ + + TP RL L + L Sbjct: 1 MTDFLLELRCEEIPARMQVKASDDLARLFADELAKAGLKPSAIDSFVTPRRLALIARDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GPR A +A+DGFLR TGL D ++D V+ AV+ KP R Sbjct: 61 LETAAVSEEFKGPRTSAPAQALDGFLRKTGLT--QDQLEERDG----VWFAVVNKPGRAA 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL VP I+ PWPKSMRW + W+RPLK I+ IL E+++D+++ Sbjct: 115 ADVLAQAVPAVIRAFPWPKSMRWGAASQTTESLRWVRPLKGIVTIL-----GEQLVDIEM 169 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + + G T GHRFH P I + Y+ L V+ + R+ I A A+A G Sbjct: 170 EGLRSGYATLGHRFHHPGEITIGGAHDYLEKLRACHVIASHQERQAIIAAKADEAAAAHG 229 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ++EDK L+ E GL EW +G FD +L +P E+I+LT++ NQK FV R +G LA Sbjct: 230 YSVIEDKGLVAENAGLTEWPVPLLGDFDPAFLEVPPEVIQLTLRINQKYFVLRDTDGNLA 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI +NI A DGGAAI+ GN +V+AARL DA FW++D+ + K + F+ Sbjct: 290 PAFICTANIDAKDGGAAIIAGNRKVLAARLSDARFFWEQDRKTSLADHAKKLERITFHEK 349 Query: 361 LSKPLD--QRMARLDMLDV-------VFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L D +R+A+L V AK G QG+ L L Sbjct: 350 LGTVADKVERVAKLARWLVEEGIVGASAPAKAGAQGDEAQPNSGLLPLQEHCGAELATLA 409 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A L KADL TE+V EFPELQG +G YA ++ + DAI +H KP G ++VPT Sbjct: 410 EQAARLCKADLVTEMVGEFPELQGVMGGYYARAEDLPDAVADAIRDHYKPVGQGDDVPTA 469 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI-------- 523 +++ VSLADKLDT+ +F+ I+EKP+GSKDP+ALRRA LGII+++++N + + Sbjct: 470 PVTVAVSLADKLDTITSFFGIDEKPTGSKDPFALRRAALGIIQLVIKNDLRLRLLDLIIY 529 Query: 524 -----------------------------PLSQFI------EDQNLILFFHDRLKLYLHD 548 L+ L+ FF DRLK+ + Sbjct: 530 VSRGNEGDFTQRFVFEDNFRDWLKAGGEGDLAAVNGILLRGNGLALLDFFADRLKVQQKE 589 Query: 549 RDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE--- 604 +RHDLI+A+ D+L+ ++ +K L F ++ G L KR IL + Sbjct: 590 AGVRHDLIDAVFAIGGEDDLVRLLARVKALQSFVATDDGANLLAGYKRAANILKKDAPDL 649 Query: 605 --------------KKNREISLEISP----------QYLLLEAEKRLYAVISDFGTHIQE 640 + E S Y AE L + + Sbjct: 650 SSARHPGLEPGSRFFDDAEGSGTPDQVRGDDAADALSYTPEPAEADLITALDAAEPRAAQ 709 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ +R+ L ++ PI+ FFD V VN D + R +RL+LL +++ + V + K Sbjct: 710 AVAEERFEDAMAALATLRAPIDAFFDSVTVNDPDPDKRASRLALLARVRDAVHNVADFSK 769 Query: 701 I 701 I Sbjct: 770 I 770 >gi|260893578|ref|YP_003239675.1| glycyl-tRNA synthetase, beta subunit [Ammonifex degensii KC4] gi|260865719|gb|ACX52825.1| glycyl-tRNA synthetase, beta subunit [Ammonifex degensii KC4] Length = 690 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 222/730 (30%), Positives = 350/730 (47%), Gaps = 72/730 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLEI +EE+PAR+ EDL LL+E + Y+ ++ + TP RL L +KGL+ Sbjct: 1 MRDFLLEIGTEEMPARLLSSILEDLREKAQELLREARLSYREIKTFGTPRRLVLLVKGLA 60 Query: 61 PHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E GP G KA GF RS G++ + + + AV Sbjct: 61 EKQERLVREVKGPARRVAFDEEGKPTKAALGFARSQGVKVED--LVVRLVGDTEYVYAVK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +VL+ + P I + +P+SMRW S+IRP++ +L + E Sbjct: 119 EEEGRPTPEVLRELCPRLITSLSFPRSMRWGDKK-----ISFIRPIRWLLALY-----GE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I +L + GN+T GHRF + P+ V S + Y + + E V++DPE R+ IL+ Sbjct: 169 EVIPFELDGLKAGNVTRGHRFLSSAPVTVPSPEAYFQLMAENFVVVDPEERKKLILSQLE 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA+ G ++ D +LLEE+ LVE+ F GSF ++L LPE ++ T+K +Q+ F R Sbjct: 229 ELAAREGGKVEADPELLEEVANLVEYATAFCGSFSPEFLRLPEAVLVTTMKEHQRYFPLR 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L F+ V + + I +GN RV+ ARL DA F++ D Sbjct: 289 DKEGKLLPRFLAVHSSSPAHT-EGIRKGNERVLKARLADASFFYRED------------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VAL 410 L++PL R+ L VV+ +GT ++ R++ L + + D + Sbjct: 335 -------LARPLADRVEGLKR--VVYLEDLGTLYDKTLRLQELVAYLGNELGVDDATRKI 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA L+KADL T +V EFPELQG +G+EYA+ E+ + +A+ E PR + +P Sbjct: 386 LARAAYLAKADLLTHMVYEFPELQGVMGREYALASGEDPAVAEALYEQYLPRFAGDALPQ 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII------------LE 518 + LADK+D L+ + + P+GS+DPYALRR LGII II E Sbjct: 446 TMPGRILGLADKVDNLVGCFGLGLIPTGSQDPYALRRQALGIIHIITSASLSLSLSRLWE 505 Query: 519 N-------KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++ + L + +L FF RL+ ++ IR ++IEA+L D+L Sbjct: 506 KAYQAYRGRLRLGLEEV--LGSLRDFFAQRLRALWGEK-IRAEVIEAVLAVGFDDLNRAF 562 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L F + R IL K + P + AE+ LY + Sbjct: 563 LKTQALAAFCQDPAFPLLHTAYLRAVNIL-----KGNLPEEKPDPSLFVHPAEQELYDTL 617 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + Y + L + +P+ FFD VLV ++ +R NRL+LL +I + Sbjct: 618 VGLEEEVAPDLKRGDYFAVLQKLTRLHDPVARFFDGVLVMDENPALRANRLALLAWIVRL 677 Query: 692 ILIVINVQKI 701 + V ++ I Sbjct: 678 VREVGDISCI 687 >gi|258622965|ref|ZP_05717980.1| glycyl-tRNA synthetase beta subunit [Vibrio mimicus VM573] gi|258584748|gb|EEW09482.1| glycyl-tRNA synthetase beta subunit [Vibrio mimicus VM573] Length = 688 Score = 595 bits (1533), Expect = e-167, Method: Composition-based stats. Identities = 201/725 (27%), Positives = 336/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVTNL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVDMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTIRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAKQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDANKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|197117039|ref|YP_002137466.1| glycyl-tRNA synthetase subunit beta [Geobacter bemidjiensis Bem] gi|238690872|sp|B5ED84|SYGB_GEOBB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|197086399|gb|ACH37670.1| glycyl-tRNA synthetase, beta subunit [Geobacter bemidjiensis Bem] Length = 687 Score = 595 bits (1533), Expect = e-167, Method: Composition-based stats. Identities = 209/727 (28%), Positives = 341/727 (46%), Gaps = 68/727 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LEI EEIPA KA D+ +++ + Y + TP RL L +KG+ Sbjct: 1 MAKDLFLEIGCEEIPAGFVPKAMADMELLIKKEFDSARIEYGEIVTLGTPRRLVLAVKGV 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ +GP G KA GF R G+ + +KG+ AV Sbjct: 61 AERQPDAELTAMGPAKSHAYDADGNPTKAAQGFARGQGIDVSQLKLV--TTEKGEYLAAV 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + R ++L ++P I +P+ KSMRW+ + RP+ I+ + Sbjct: 119 KSEIGRATAELLPELLPRLIGNIPFKKSMRWADFD-----VRFARPIHWIVALF-----D 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 K++ I G+ + GHRF A V+ L HY+ + E V+ DP R+ I + Sbjct: 169 GKVVPFSFGNIDSGSASRGHRFMANTSFPVRDLAHYLEECERHFVIPDPNKRKEIIRAEI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R+A ++ D+ LLE++ LVE+ G+F +L +P E++ +++ +Q+ F Sbjct: 229 ERVAKQAKGNVLPDEALLEQVSYLVEYPSAVHGTFSPDFLVVPREVLITSMREHQRYFSL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI ++N D +V+GN RV+ ARL DA F+ D Sbjct: 289 VDDEGKLLPGFITINNTITED-PQVVVKGNERVLRARLSDARFFFDEDH----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-V 411 L+ R+ L VV+ AK+GT E++ R R LGK++AQ ++ V V Sbjct: 337 ---------KVRLEARVESLK--SVVYQAKLGTSYEKMERFRELGKRLAQRLNPAVTKEV 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA L KADL + +V EFPE+QG +G+EYA+ E + +AI EH P +P + Sbjct: 386 ERAATLCKADLVSGMVGEFPEVQGIMGREYALHDGEEKAVANAIAEHYLPTQAGGELPAS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 I VSLADK+DT+ +++ P+GS DPYALRR+ LGII IIL+ PLS F++ Sbjct: 446 DIGAFVSLADKMDTICGCFSVGLIPTGSADPYALRRSALGIINIILDKGYREPLSDFVKA 505 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++++ FF R + DR D +EA++ D+L+ I Sbjct: 506 SLDLLSAKATRPLAEVQKDVLDFFRGRFVNLMADR-FPSDAVEAVVSVSFDDLVEAAAKI 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L F + ++ KR+ I+ + +S + AE L+ ++ Sbjct: 565 EALAGFRNRDDFGPLAVAFKRVCNIVK------DGVDTPVSTELFQDAAEGELHQALTQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + ++ Y + ++ +++FF++V+V +D VR NRL+LL I + Sbjct: 619 SGKVAAALKKADYLAALTEIATLKPAVDLFFEKVMVMAEDERVRQNRLALLTGIARLFGS 678 Query: 695 VINVQKI 701 + + ++ Sbjct: 679 LADFSRL 685 >gi|149201986|ref|ZP_01878960.1| glycyl-tRNA synthetase subunit beta [Roseovarius sp. TM1035] gi|149145034|gb|EDM33063.1| glycyl-tRNA synthetase subunit beta [Roseovarius sp. TM1035] Length = 749 Score = 595 bits (1533), Expect = e-167, Method: Composition-based stats. Identities = 271/772 (35%), Positives = 392/772 (50%), Gaps = 96/772 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAA+DL L L E G+ Y + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQSKAADDLRARLTEALVEAGLTYAGAAAFSTPRRLALTVQGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPRV A ++AI+GFLR GL +D KKG VY A + KP R Sbjct: 61 GQSPTTREERKGPRVDAPEQAIEGFLRGAGLTRDDLEI--RDEKKGQVYFATITKPGRAA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ + I+ PWPKSMRW + W+RPL SILCIL E + ++DLD+ Sbjct: 119 AEIVAEELDKIIRNFPWPKSMRWGAG-----SLRWVRPLHSILCILTDEAGEVTVVDLDV 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF A V S D Y L A V+L+ E R I +A A A G Sbjct: 174 DGIRAGNTTEGHRFMAAGRFAVSSFDDYRTKLRRAHVILEAEERAAHIWQEASNQAFASG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED LL E+ GLVEW V MG D +L LP E+++ +++ +QK F + + Sbjct: 234 LELVEDPSLLAEVAGLVEWPVVLMGRIDDAFLGLPPEVLQTSMREHQKFFSVKNPKTGRI 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ +D G I+ GN +V+AARL DA FW+ D L A Sbjct: 294 ERFVTVANVETADQGVTILAGNQKVLAARLSDAKFFWENDLRTLQAEGLEGMGA------ 347 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + V FH K+G+Q +R++RI L ++IA + AD L ++A ++KA Sbjct: 348 ------------GLAHVTFHNKLGSQADRIARIAALAREIAPHVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G+ YA A +EH P GP + VP+ +S+ V+LA Sbjct: 396 DLQSAMVGEFPELQGLMGRYYAAEAGLAPEVAAACQEHYSPLGPGDAVPSAPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN------- 533 DK+DTL FWA+ ++P+GSKDP+ALRRA LGIIRII+ NK+ + LS I++ + Sbjct: 456 DKIDTLTGFWAVPDEPTGSKDPFALRRAALGIIRIIIANKLRVRLSVGIDNTDSDLIEAG 515 Query: 534 ------------LILFFHDRLK-LYLHDRDIRHDLIEAILRP----------------EN 564 L L +RL+ Y RD + EA + P Sbjct: 516 EFSPIECAYLGHLDLGQPNRLRSNYWRLRDFGKLIAEASMDPYNRYCKQTLLGFGKGNRV 575 Query: 565 DNLLTIV-DLIK-----------HLNEFFSSAKGEKFLLSAKRI---------------- 596 ++LL+ + D +K ++ + + L +R Sbjct: 576 NDLLSFLHDRLKVHLREEGIRHDVIDACLAMPGNDDLTLLVQRARALSDFLKTDDGENLL 635 Query: 597 ------FQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 IL E+K+ E S ++ + EK L+A ++ I ++ + + + Sbjct: 636 QGFKRANNILTQAEEKDGVEYSYGADVKFAETDEEKALFAALATAEPAIANALKAEDFAR 695 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ PI+ FF V VN + + +R NRL+LL I+NI L ++ +I Sbjct: 696 AMGAMAALRAPIDAFFTAVQVNAESQVIRRNRLNLLSSIRNICLQAADLGRI 747 >gi|254291119|ref|ZP_04961916.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae AM-19226] gi|150422964|gb|EDN14914.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae AM-19226] Length = 688 Score = 595 bits (1533), Expect = e-167, Method: Composition-based stats. Identities = 201/725 (27%), Positives = 335/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVDMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASSRTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|262172786|ref|ZP_06040464.1| glycyl-tRNA synthetase beta chain [Vibrio mimicus MB-451] gi|261893862|gb|EEY39848.1| glycyl-tRNA synthetase beta chain [Vibrio mimicus MB-451] Length = 688 Score = 594 bits (1531), Expect = e-167, Method: Composition-based stats. Identities = 202/725 (27%), Positives = 336/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGRE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + I GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVKSDRIVRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAKQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNTNVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|222054674|ref|YP_002537036.1| glycyl-tRNA synthetase, beta subunit [Geobacter sp. FRC-32] gi|254781851|sp|B9M5V4|SYGB_GEOSF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|221563963|gb|ACM19935.1| glycyl-tRNA synthetase, beta subunit [Geobacter sp. FRC-32] Length = 687 Score = 594 bits (1531), Expect = e-167, Method: Composition-based stats. Identities = 207/727 (28%), Positives = 346/727 (47%), Gaps = 68/727 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LEI +EEIPA KA D+ ++ L+ + + ++ TP RL L +K + Sbjct: 1 MAKELFLEIGTEEIPAGFLPKAMADMEGLIRKELESARIGFGEVKTMATPRRLALVVKNV 60 Query: 60 SPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + +GP KA +GF R G+ + I +KG+ Sbjct: 61 SAQQTDAEITTMGPAKKVAFNDDGTTTKAGEGFARGQGVDASALSIIA--TEKGEYVAVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ +L I+P I +P+ KSMRW + RP+ I+ + Sbjct: 119 KKEIGVATAGLLAEILPRLINNIPFKKSMRWGDQE-----VRFARPMHWIVALF-----D 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + G+++ GHRF A V+ HY+ + E V+ DP R+ I + Sbjct: 169 GTVIPFAFGNVQSGSMSRGHRFMANTSFPVRDFGHYLEECERHFVIPDPAKRKEIISREI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R+A A G ++ D+ LLE++ LVE+ G+F ++L +P+E++ +++ +Q+ F Sbjct: 229 ERVAKAAGGNVLPDEGLLEQVTYLVEYPSAVHGTFSAEFLAVPKEVLITSMREHQRYFSL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI ++N D + +V+GN V+ ARL DA F++ D+ Sbjct: 289 VDDKGKLLPGFITINNTLTED-PSVVVKGNEMVLRARLSDARFFFEEDK----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 PL++R+ L V++ AK+GT E++ R R L + +A+ + A V Sbjct: 337 ---------KVPLEKRVEALK--SVLYQAKLGTSYEKMERFRTLAEGLAEQLQPPLKAKV 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +A L KADL T +V EFPE+QG +G+EYA+LQ + AI EH P +P + Sbjct: 386 FQAATLCKADLVTGMVGEFPEVQGIMGREYALLQGVDAEVARAIAEHYLPNQAGGELPAS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 VS+ADK+DT+ +++ PSGS DPYALRRA LGII IIL ++PL + Sbjct: 446 DTGAFVSIADKVDTICGCFSVGLIPSGSADPYALRRAALGIINIILAKGYNLPLIPLVTK 505 Query: 532 -----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +++ FF R L DR D++EA++ DNL+ I Sbjct: 506 AIGQLEGRLTRKKEEVLADVLDFFKGRFINLLTDR-FPADVVEAVVAVSFDNLVEATAKI 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L +F E ++ KR+ I+ ++++ + + AE L+ Sbjct: 565 EALAQFKKRDDFEPLAVAFKRVCNIVK------EQVTVPVDDKLFQDAAEGTLFQSFKSA 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + ++E + + Y + S+ ++ FFD+V+V +D VR+NRL+LLQ IK++ Sbjct: 619 SSMVEEKVVQREYLAALTQIASLKGAVDDFFDKVMVMAEDEGVRNNRLALLQEIKSLFRD 678 Query: 695 VINVQKI 701 + + K+ Sbjct: 679 IADFGKL 685 >gi|258626089|ref|ZP_05720940.1| glycyl-tRNA synthetase beta subunit [Vibrio mimicus VM603] gi|258581615|gb|EEW06513.1| glycyl-tRNA synthetase beta subunit [Vibrio mimicus VM603] Length = 688 Score = 593 bits (1530), Expect = e-167, Method: Composition-based stats. Identities = 202/725 (27%), Positives = 337/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + I GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVKSDRIVRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAKQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDANKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLTRNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|121727896|ref|ZP_01680955.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae V52] gi|121629840|gb|EAX62255.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae V52] Length = 688 Score = 593 bits (1530), Expect = e-167, Method: Composition-based stats. Identities = 201/725 (27%), Positives = 335/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLLGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|254471700|ref|ZP_05085101.1| glycyl-tRNA synthetase, beta subunit [Pseudovibrio sp. JE062] gi|211958902|gb|EEA94101.1| glycyl-tRNA synthetase, beta subunit [Pseudovibrio sp. JE062] Length = 745 Score = 593 bits (1530), Expect = e-167, Method: Composition-based stats. Identities = 293/770 (38%), Positives = 411/770 (53%), Gaps = 96/770 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL +L L E GV Y+ + Y TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRRAAEDLKSLLTNALVEAGVTYEGAKAYATPRRLALHIAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA +KA+ GFLR GL +I + ++ DPKKGD Y+AV+ KP R Sbjct: 61 AGSKATREERKGPRVGAPEKALAGFLRGAGLTSIEEAEVHNDPKKGDFYVAVIEKPGRKT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ ++P I+ PWPKS RW + + W+RPL SI+C E + ++I ++ Sbjct: 121 EDIVADVMPDIIRNFPWPKSQRWGSGN-----LRWVRPLHSIVCTFGPETEEPEVIPFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP I+V+ L+ Y+ LE A V+LD + R++ I DA A A+G Sbjct: 176 DGITSGQTTYGHRFMAPEAIEVRRLEDYMSKLEAAKVVLDADRRKDIIDTDAKNAAMALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED LLEE+ GL EW V +GS+D+ +L LP+E+I+LTIK NQK FV R L Sbjct: 236 LELVEDAGLLEEVAGLNEWPTVLIGSYDESFLQLPDEVIQLTIKVNQKNFVLRDPATSNL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N F L +NI A DGG I+ GN +VV+ARL DA FW+ D Sbjct: 296 SNKFALTANIVAKDGGTKIIAGNEKVVSARLSDAKFFWETD------------------- 336 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ +++L D+VFH K+G+ RV R+ L +IA L+ AD+ RA L+K Sbjct: 337 -LKTKLESNVSKLQ--DIVFHEKLGSVAARVDRLERLAAEIAPLVGADIEQTKRAARLAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G+ YA Q E+ + AIE+H KP G ++VPT+ +SI V+L Sbjct: 394 ADLVSAMVFEFPELQGLMGRYYAEAQGEDAAVAQAIEDHYKPAGASDDVPTSPVSIAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---QNLIL 536 ADKLD L FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + +PL + +NL Sbjct: 454 ADKLDILAGFWAIDEKPTGSKDPFALRRAALGVIRLVLENDLRLPLRDVLVQSLRRNLAD 513 Query: 537 FFHDRLKLYLHD----------RDIRHDLIEAILRPENDNLLTIVDLI------------ 574 R + L D + D+ + + + L + D I Sbjct: 514 IAAARGESALSDLPFIGKGKTGEGVVKDIFSMVSKAADVVLANVSDKIPETSLETGLIDD 573 Query: 575 --------------------KHLNEFFSSAKGEKFLLSAKRI------------FQIL-- 600 ++ + + L K+ +L Sbjct: 574 LLGFFADRMKVVLKDKGVRHDLIDAVLARGGQDDIALIVKQAEALAGLLGSEDGANLLAG 633 Query: 601 ---------AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 A E+K + + L +AEK L A + I+ +D + Sbjct: 634 YKRAANILRAEEKKDGKTFEGKPDAALLEEQAEKDLAAALDSVLVEIKPLLDSADFSGAM 693 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + P++ FFD + VN + EVR+NRL +L I+ + V + KI Sbjct: 694 AALAKLRGPVDGFFDNIHVNAEKPEVRENRLKILSEIRAAVHQVADFSKI 743 >gi|327482932|gb|AEA77339.1| Glycyl-tRNA synthetase beta chain [Vibrio cholerae LMA3894-4] Length = 688 Score = 593 bits (1529), Expect = e-167, Method: Composition-based stats. Identities = 201/725 (27%), Positives = 335/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|15640052|ref|NP_229679.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587243|ref|ZP_01677016.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 2740-80] gi|147674732|ref|YP_001218392.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae O395] gi|153817571|ref|ZP_01970238.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae NCTC 8457] gi|153821948|ref|ZP_01974615.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae B33] gi|227080257|ref|YP_002808808.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae M66-2] gi|229508305|ref|ZP_04397809.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae BX 330286] gi|229508856|ref|ZP_04398347.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae B33] gi|229517127|ref|ZP_04406573.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae RC9] gi|229606579|ref|YP_002877227.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae MJ-1236] gi|254851584|ref|ZP_05240934.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae MO10] gi|255746798|ref|ZP_05420744.1| glycyl-tRNA synthetase beta chain [Vibrio cholera CIRS 101] gi|262167108|ref|ZP_06034823.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae RC27] gi|298501204|ref|ZP_07011003.1| glycyl-tRNA synthetase, beta subunit [Vibrio cholerae MAK 757] gi|11387203|sp|Q9KVW8|SYGB_VIBCH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|172047498|sp|A5F487|SYGB_VIBC3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781870|sp|C3LP93|SYGB_VIBCM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|9654412|gb|AAF93198.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548489|gb|EAX58545.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 2740-80] gi|126511839|gb|EAZ74433.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae NCTC 8457] gi|126520568|gb|EAZ77791.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae B33] gi|146316615|gb|ABQ21154.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae O395] gi|227008145|gb|ACP04357.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae M66-2] gi|227011977|gb|ACP08187.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae O395] gi|229346190|gb|EEO11162.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae RC9] gi|229354131|gb|EEO19063.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae B33] gi|229354578|gb|EEO19500.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae BX 330286] gi|229369234|gb|ACQ59657.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae MJ-1236] gi|254847289|gb|EET25703.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae MO10] gi|255735555|gb|EET90954.1| glycyl-tRNA synthetase beta chain [Vibrio cholera CIRS 101] gi|262024494|gb|EEY43180.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae RC27] gi|297540076|gb|EFH76138.1| glycyl-tRNA synthetase, beta subunit [Vibrio cholerae MAK 757] Length = 688 Score = 593 bits (1529), Expect = e-167, Method: Composition-based stats. Identities = 201/725 (27%), Positives = 335/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|291288703|ref|YP_003505519.1| glycyl-tRNA synthetase, beta subunit [Denitrovibrio acetiphilus DSM 12809] gi|290885863|gb|ADD69563.1| glycyl-tRNA synthetase, beta subunit [Denitrovibrio acetiphilus DSM 12809] Length = 687 Score = 593 bits (1529), Expect = e-167, Method: Composition-based stats. Identities = 224/727 (30%), Positives = 344/727 (47%), Gaps = 65/727 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDFLLEI SEEIPA A E L + G+ + ++ TP R ++ +KGL+ Sbjct: 1 MPDFLLEIGSEEIPAGFIGSACEYLKNDFTKRFTDAGIGFNDIESDGTPRRFYVSIKGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 ++ + +GP G KA GF++S GL D K + ++G V Sbjct: 61 EKQEDREDTIMGPPAAVAFDADGNLTKAGLGFVKSKGLS--EDSLTKAETERGIYLSGVK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + D ++ I+ I+ +P+ KSM W F + RP+ L + + Sbjct: 119 KTKGVPTRDFIEGILIDVIKSIPFRKSMHWGD-----KTFRYARPVHWFLALFGGD---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I D+ I GN T GHR HA +V+ D Y L+EA V+ E R + + Sbjct: 170 -VISFDIDGIKSGNKTMGHRIHANEYFEVKDFDDYKAKLKEARVISSTEERISQVREQVA 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + G ++ D+DLLE + GLVE+ MG F+++YL +P E++ ++K +QK F Sbjct: 229 EIEKETGYKVDLDEDLLETVAGLVEYPVALMGEFEERYLDIPAEVLITSMKNHQKYFYVT 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L N FI VSN +D + G +RV+ ARL DA FW D+ Sbjct: 289 DKDGNLVNKFIGVSNTVPND-PQLVKTGYARVLRARLADAEFFWANDR------------ 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALVD 412 PL+ R+ L VV+ KIGT E++ R R L ++ ++ + Sbjct: 336 --------KYPLENRVEELK--KVVYQEKIGTSYEKMERFRKLAVFFSENLNPSAKTDTE 385 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L KADL +E+V EFPELQG +G YA LQ EN AIEEH PR +++P + Sbjct: 386 RAATLCKADLLSEMVYEFPELQGIMGHRYAKLQGENDVVAQAIEEHYLPRFAGDDLPESD 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 +S+ADKLDT+ +AIN P+G++DPYALRR +GI+ I I L + I + Sbjct: 446 TGAFISMADKLDTICGCFAINLIPTGNQDPYALRRGAIGILSTIKAKGYRIGLKEMIGES 505 Query: 533 N-----------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + F R + L I D +EA +D+++TI K Sbjct: 506 ADLLSGYISFDKEKTVELVYDFIIQRYRQILAGEGIPADCVEAACEI-SDDIITIEAAAK 564 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L+E + + KRI IL KK+ S + E+ L +I+D Sbjct: 565 ALSESKQTKEFASIAAGYKRINNIL----KKSGHTSENYDEALFEDDYERELAKLIADKA 620 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 I + + + L + P++ FF+ V+V D ++R NRLSLL +K++ ++ Sbjct: 621 DQINREVSEENFTMAMTQLLTFSAPVDNFFENVMVMAKDEKIRLNRLSLLNKLKSVFNML 680 Query: 696 INVQKIV 702 ++ KI+ Sbjct: 681 GDLTKII 687 >gi|262370018|ref|ZP_06063345.1| glycyl-tRNA synthetase subunit beta [Acinetobacter johnsonii SH046] gi|262315057|gb|EEY96097.1| glycyl-tRNA synthetase subunit beta [Acinetobacter johnsonii SH046] Length = 689 Score = 593 bits (1529), Expect = e-167, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 349/724 (48%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKTLRDALQAETVKGLKDAGLAFDSIEAYAAPRRLALKIIN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP V G KA++GF+R G+ + K + Sbjct: 61 VDGAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITADQVSTFQ--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + Sbjct: 119 LKDVQGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++D +++ GN+TYGHRFHAP I + + D Y+ L A V+ + E R+ I Sbjct: 169 DNDVVDATIQDHKAGNVTYGHRFHAPEAITLANADAYLDALRAAKVVANFEERQAIIDQQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA V + DL +E+ LVEW SF++++L +P+E + T++ NQK F Sbjct: 229 VKTLADEVNAIAIVPADLRDEVTALVEWPVALRASFEERFLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 LVNADNKLQPYFITVSNIESKD-PTQIIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT + RI L ++ + A+ A Sbjct: 338 ----------KQPLASRKEKL--ANMVFQAQLGTLWNKSERIAKLAVALSAITGANPADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P Sbjct: 386 EKAALLAKCDLTSELVGEFPELQGIAGTYYARIEGENDEVAEALGEQYLPKFAGDVLPQT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 K T++LAD+LDTL + I + P+GSKDP+ALRR+ +GI+R++ EN +DI + + I+ Sbjct: 446 KTGTTIALADRLDTLTGIFGIGQAPTGSKDPFALRRSAIGILRLVTENNLDISIEELIKL 505 Query: 531 ---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F R + D+ + D+I+A+ + L + Sbjct: 506 ALASYGDVLKDHDKTLADAVAFLEGRYRAKYEDQGVAVDVIQAVQALSPKSPLDFDKRVT 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F S + + KR+ ILA E + EI L+ +AEK LYA I Sbjct: 566 AVNHFRSLPEAAALAAANKRVANILAKEAA----PTGEIVESKLVEDAEKALYAEIQAIL 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q + K Y + L ++ PI+ FFD V+V +D E++ NRL LL ++++ V Sbjct: 622 PVVQPLLAAKDYTEALSKLAALRAPIDAFFDGVMVMAEDAELKANRLRLLAQLRDLFTSV 681 Query: 696 INVQ 699 ++ Sbjct: 682 ADIS 685 >gi|229530194|ref|ZP_04419583.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae 12129(1)] gi|229332327|gb|EEN97814.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae 12129(1)] Length = 688 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 200/725 (27%), Positives = 335/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I AD+ Sbjct: 338 ----------KRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADMEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|289164399|ref|YP_003454537.1| glycyl-tRNA synthetase beta chain [Legionella longbeachae NSW150] gi|288857572|emb|CBJ11410.1| glycyl-tRNA synthetase beta chain [Legionella longbeachae NSW150] Length = 689 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 204/722 (28%), Positives = 357/722 (49%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A++ + +L+ L + ++Y +++Y TP R+ + + GL Sbjct: 4 DFIFELGCEELPSGSVWPLADEFANLLLTALDKAQLVYGQVKRYATPRRIAVAILGLQAQ 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP + G A+ GF++S G + +++ +KG + + Sbjct: 64 QQSQRITRRGPALAAAYDKEGNPSPALLGFVKSCGAELEQLSRLE--TEKGAWIVYETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L T++ A+ + K MRW + + RP+ I+ + + + Sbjct: 122 QGNKTKDLLPTLISQALATLSISKPMRWGSGDD-----EFARPVHWIVTLY-----GDDV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ L I G I+ GHRFH P I + S Y ++EA V+ D RR I +L Sbjct: 172 IEYTLLGIQSGRISRGHRFHHPQQISIHSAQSYEAQMKEAFVMADFAHRRQIIQEQVKQL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A++ + + LL+E+ +VEW Q M F+K++L +P E + +++++QKCF + + Sbjct: 232 AASYQATAIMPESLLDEVTSIVEWPQALMADFEKEFLEVPAESLIASMQSHQKCFALKDK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI VSNI +S ++ GN +V+ ARL DA F+++D+ Sbjct: 292 QGNLLPHFITVSNIVSS-NPKQVIMGNEKVMRARLSDAAFFFRQDK-------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 + L QR+ VVF AK+GT ++ R+ + ++ ++ +V RA Sbjct: 337 ------KQALSQRIP--GTEHVVFQAKLGTLLDKALRVEAMMTYLSAALNLEVHQAQRAA 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 LSK DL T +V EFPELQG +G YA+ E+ + A+ E PR +++P + + + Sbjct: 389 QLSKCDLLTGMVGEFPELQGLMGYYYALNDGEDQAVAHALNEQYMPRFSADSLPKSDLGL 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SLA+++DTL+ +AI +KPSG KDP+ LRR L ++R+++ + + LS IE Sbjct: 449 ALSLAERVDTLVGIFAIGQKPSGVKDPFKLRRHALAVVRLLISTRAPLNLSTLIEQAITH 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L LF DRL+ Y + + DLI A +++ L + + L Sbjct: 509 YGVTVSIEPNLRHELKLFILDRLQSYYQGQGLSIDLIHAGRARQDEWLYDLDKRLSALQA 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ +LA EK + I + E EK LY I ++ Sbjct: 569 FVTLPEAASLSAACKRVNNLLAQIEK---HVLPPIKEELFEDEVEKSLYTQIKHISQAVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL ++ EP++ FFD+V+V VDD ++ NRL+LL +++++ V ++ Sbjct: 626 PLYRTGEYSSLLKLLATLKEPVDAFFDKVMVMVDDASIKSNRLALLVCLQDLLQGVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|270157200|ref|ZP_06185857.1| glycyl-tRNA synthetase beta subunit [Legionella longbeachae D-4968] gi|269989225|gb|EEZ95479.1| glycyl-tRNA synthetase beta subunit [Legionella longbeachae D-4968] Length = 689 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 203/722 (28%), Positives = 358/722 (49%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A++ + +L+ L + ++Y +++Y TP R+ + + GL Sbjct: 4 DFIFELGCEELPSGSVWPLADEFANLLLTALDKAQLVYGQVKRYATPRRIAVAILGLQAQ 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP + G A+ GF++S G + +++ +KG + + Sbjct: 64 QQSQRITRRGPALAAAYDKEGNPSPALLGFVKSCGAELEQLSRLE--TEKGAWIVYETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L T++ A+ + K MRW + + RP+ I+ + + + Sbjct: 122 QGNKTKDLLPTLISQALATLSISKPMRWGSGDD-----EFARPVHWIVTLY-----GDDV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ L I G I+ GHRFH P I + S Y ++EA V+ D RR I +L Sbjct: 172 IEYTLLGIQSGRISRGHRFHHPQQISIHSAQSYEAQMKEAFVMADFAHRRQIIQEQVKQL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A++ ++ + LL+E+ +VEW Q M F+K++L +P E + +++++QKCF + + Sbjct: 232 AASYQATVIMPESLLDEVTSIVEWPQALMADFEKEFLEVPAESLIASMQSHQKCFALKDK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI VSNI +S ++ GN +V+ ARL DA F+++D+ Sbjct: 292 QGNLLPHFITVSNIVSS-NPKQVIMGNEKVMRARLSDAAFFFRQDK-------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 + L QR+ VVF AK+GT ++ R+ + ++ ++ +V RA Sbjct: 337 ------KQALSQRIP--GTEHVVFQAKLGTLLDKALRVEAMMTYLSAALNLEVHQAQRAA 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 LSK DL T +V EFPELQG +G YA+ E+ + A+ E PR +++P + + + Sbjct: 389 QLSKCDLLTGMVGEFPELQGLMGYYYALNDGEDQAVAHALNEQYMPRFSADSLPKSDLGL 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SLA+++DTL+ +AI +KPSG KDP+ LRR L ++R+++ + + LS IE Sbjct: 449 ALSLAERVDTLVGIFAIGQKPSGVKDPFKLRRHALAVVRLLISTRAPLNLSTLIEQAITH 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L LF DRL+ Y + + DLI A +++ L + + L Sbjct: 509 YGVTVSIEPNLRHELKLFILDRLQSYYQGQGLSIDLIHAGRARQDEWLYDLDKRLSALQA 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ +LA EK + I + E EK LY + ++ Sbjct: 569 FVTLPEAASLSAACKRVNNLLAQIEK---HVLPPIKEELFEDEVEKSLYTQVKHISQAVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL ++ EP++ FFD+V+V VDD ++ NRL+LL +++++ V ++ Sbjct: 626 PLYRTGEYSSLLKLLATLKEPVDAFFDKVMVMVDDASIKSNRLALLVCLQDLLQGVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|89055222|ref|YP_510673.1| glycyl-tRNA synthetase subunit beta [Jannaschia sp. CCS1] gi|88864771|gb|ABD55648.1| glycyl-tRNA synthetase beta chain [Jannaschia sp. CCS1] Length = 739 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 262/764 (34%), Positives = 385/764 (50%), Gaps = 90/764 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +A+ D+ ++ L E G+ Y + + TP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQARASADVKRLVTDGLVEAGLTYASAGSFVTPRRLVLTVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +SP E+R GP+VGA KA++GFLR G+ +++ KKG Y A + R Sbjct: 61 DNSPTTTEDRRGPKVGAPDKALEGFLRGAGVAREDLE--EREDKKGTFYYAKVTSEGRAT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++P ++ PWPKSMRW + W+RPL+SILC+L ED + +++ D+ Sbjct: 119 SDIIADLIPQIVRNFPWPKSMRWG-----TGSLRWVRPLQSILCLLTREDGSD-VVNFDV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP V S D Y L A V+L P+ R +AI +DA +A A G Sbjct: 173 DGIASGNTTEGHRFMAPGRFSVSSFDDYSAKLRAAKVVLSPQDRSDAIWHDATNMAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG + +L LP E+++ +++ +QK F R Sbjct: 233 LEVVEDAGLLTEVAGLVEWPVVLMGEIAEGFLGLPAEVLQTSMREHQKFFSVRNPATGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GNS+V++ARL D FW D + A Sbjct: 293 ERFITVANRETADEGATILAGNSKVLSARLADGKFFWDNDLRIARDGMGAWRKA------ 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V F ++G+Q ERV RI L +IA ++ AD + A ++KA Sbjct: 347 -------------LENVTFERRLGSQAERVERIATLALEIAPMVGADPTAAETAARIAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +GK YA+ + + E+H P GP +NVPT +SI V+LA Sbjct: 394 DLSSEMVYEFPELQGTMGKYYALEAGLDPAIAAVAEDHYAPLGPTDNVPTAPLSIAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF--- 537 DKLD L FWAI+EKP+GSKDP+ALRRA LG+IRI+L+ + + L + + Q ++ Sbjct: 454 DKLDLLTGFWAIDEKPTGSKDPFALRRAALGVIRIVLDGGLRVRLDRLFDMQLVVHKGAI 513 Query: 538 ---------------------FHDRLKLYLHDRDIRH-----DLIEAILRPENDNLLTIV 571 F K R ++ E + +D L Sbjct: 514 IDPIDRDEVAELVREIANHGVFGAAWKAVKESRGGLPSSGFIEMKEQVPDKSDDLLAFFH 573 Query: 572 DLIK-----------HLNEFFSSA----------------------KGEKFLLSAKRIFQ 598 D +K ++ S GE + KR Sbjct: 574 DRLKVHLKAENIRHDVIDAALSMPSNDDLSLVVARARALQAFLDTPDGENLIQGYKRSAN 633 Query: 599 ILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 ILA E K+ E +Y + E+ L+ + T I ++ +R+ + + + Sbjct: 634 ILAQAEAKDGVEYRYGADVKYAETDEERALFTALDVARTAIAPALAEERFEEAMTEMAKL 693 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FF+ V VN D+ VR NRL+LL I V ++ +I Sbjct: 694 RAPIDAFFEAVQVNADNDIVRRNRLNLLNDIAQTCGAVADLTRI 737 >gi|330831645|ref|YP_004394597.1| glycyl-tRNA synthetase subunit beta [Aeromonas veronii B565] gi|328806781|gb|AEB51980.1| Glycyl-tRNA synthetase beta subunit [Aeromonas veronii B565] Length = 689 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 208/723 (28%), Positives = 340/723 (47%), Gaps = 61/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI + E+P + AE + L + + + ++ + +P RL L + L+ Sbjct: 4 HTFLVEIGTAELPPKALRSLAEAFADNFKAELTKADLAFGDVEWFASPRRLALKVSELAG 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P K E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 64 EQPSKSVEKRGPAVAQAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHTAK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +D+L +V A+ K+P PK MRW ++RP+ ++ +L + Sbjct: 122 VEGRPAKDLLGELVSQALAKLPIPKMMRWGD-----KTIQFVRPVFTVTLLLDGD----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAH 233 ++ + I GHRF + + Y + L+E V+ D R+ I D Sbjct: 172 LVPAHILGIDSARTIRGHRFMGESEFTIDNASQYPQILQERGMVIADFMARKAKIKADVE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A G D LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 232 AAAAAFGGVADLDDALLEEVTALVEWPVVLTANFEEKFLAVPAEALVHTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI V+NI++ D + I+ GN +VV RL DA F+K D Sbjct: 292 DKSGKLLPKFIFVTNIESKD-PSQIISGNEKVVRPRLSDAEFFFKTD------------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L + L R+ RL+ V+F ++GT +V RI + IA+ I ADVA R Sbjct: 338 -------LKQTLASRLPRLET--VLFQQQLGTVKAKVERIETVAGFIAERIGADVAQAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ + A+ E PR + +P+ + Sbjct: 389 AGLLSKCDLMTNMVGEFTDTQGVMGMHYARHDGEDEAVAVALNEQYMPRFAGDALPSGLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + V+LADK DTL + I P G KDP+ALRRA +G +RI+ E ++D+ L + +E+ Sbjct: 449 ACAVALADKFDTLAGIFGIGMLPKGDKDPFALRRAAIGALRIMTEKQLDLDLVELVEEAV 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F R + D I D++ A+L L +K ++ Sbjct: 509 RVYGDKLTNKTVVTDVVDFMLGRFRAAYQDEGIGADVVLAVLARRPTRPLDFDRRVKAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + KR+ ILA K E+ + P+ L+ AEK L +++ + Sbjct: 569 HFRTLDAALALAAANKRVSNILA---KVEGELPTAVKPELLVDAAEKALATQVAELQAEL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y L ++ EP++ FF++V+V DD ++ NRL+LL ++N+ L V ++ Sbjct: 626 APLFAAGDYQAALTRLAALREPVDTFFNEVMVMADDEALKANRLALLNNLRNLFLQVADI 685 Query: 699 QKI 701 + Sbjct: 686 SLL 688 >gi|260753970|ref|YP_003226863.1| glycyl-tRNA synthetase subunit beta [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553333|gb|ACV76279.1| glycyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 682 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 243/707 (34%), Positives = 373/707 (52%), Gaps = 47/707 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPA +Q A E L+ +L LKE G+ + +Y TP R+ L ++ L Sbjct: 1 MADFLLELRSEEIPAGLQKMAVEKLAELLSSTLKEAGINPTKIEKYATPRRIALLMRDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPR A +KA+ GFLRSTGL ++ KG+ Y A + KP + + Sbjct: 61 AKTEAVQEERRGPRADAPEKALAGFLRSTGLTKEELEL--RETPKGNFYYAHIEKPGQTL 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +L +P I+ PWPKSMRW + + W+RPLK I+ + E++I ++L Sbjct: 119 IALLGEAIPAIIKTFPWPKSMRWGNFSASSESLRWVRPLKGIVAL-----IDEQLIPIEL 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GH FH P + + Y + A V++D + R I ++A + A G Sbjct: 174 DGITSGTETKGHPFHHPDIVTLAKASDYPEKMAAAHVMIDFDARVQKITDEARKAAQKAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L L+ED L +E GL EW +G FD+ YL +P E+I+LT++TNQK F R LA Sbjct: 234 LTLIEDAALAQENAGLTEWPVPLLGRFDEAYLAVPREVIQLTMRTNQKYFACTDRNQDLA 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V++++A DGG I QGN +V++ARL DA FW++D Sbjct: 294 AVFICVADMEAQDGGKEITQGNEKVLSARLADARFFWEQD-------------------- 333 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L PL+ + RLD V+F+ +G+ G++ RI L IA I AD +RA +L+KA Sbjct: 334 LKIPLEDWLPRLD--SVLFYEGMGSVGDKAKRIAHLSGYIADQIGADRKQAERAGLLAKA 391 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA NE A+ + + VSLA Sbjct: 392 DLASNMVGEFPELQGVMGGYYAKAGNEAPDVVSAVSGQYQAEAGAGV------AAAVSLA 445 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------QN 533 D++D+L F+ N +P+GSKDP+ALRRA + II+ I+ +++ +PL+ E ++ Sbjct: 446 DRIDSLACFFVRNIRPTGSKDPFALRRAAVQIIQTIIAHQLRLPLTPLFEKAGAGDQIES 505 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ F +RLK+ + IR+DLI+A+L D+++ ++ ++ L F S G L Sbjct: 506 LLAFITERLKVQQREAGIRYDLIDAVLALGYEDDVIRLLARVQALQSFIESEDGSDLLAG 565 Query: 593 AKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD 652 +R IL E + + + + E+ L + +++++ + Y Sbjct: 566 YRRAVNILKGSEASEKGDISQED----IEQPEQDLQKALQAIEAPLEQALKAEDYAAAMT 621 Query: 653 LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 L S+ +PI+ FFD+V+VN D +R RL+LL+ I+ + V + Sbjct: 622 ALASLRQPIDQFFDKVIVNHDKAGIRSRRLALLEQIRTAMHQVADFS 668 >gi|56552340|ref|YP_163179.1| glycyl-tRNA synthetase subunit beta [Zymomonas mobilis subsp. mobilis ZM4] gi|241761604|ref|ZP_04759691.1| glycyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|56543914|gb|AAV90068.1| glycyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis ZM4] gi|241373912|gb|EER63445.1| glycyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 682 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 243/707 (34%), Positives = 373/707 (52%), Gaps = 47/707 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPA +Q A E L+ +L LKE G+ + +Y TP R+ L ++ L Sbjct: 1 MADFLLELRSEEIPAGLQKMAVEKLAELLSAKLKEAGINPTKIEKYATPRRIALLMRDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPR A +KA+ GFLRSTGL ++ KG+ Y A + KP + + Sbjct: 61 AKTEAVQEERRGPRADAPEKALAGFLRSTGLTKEELEL--RETPKGNFYYAHIEKPGQTL 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +L +P I+ PWPKSMRW + + W+RPLK I+ + E++I ++L Sbjct: 119 IALLGEAIPAIIKTFPWPKSMRWGNFSASSESLRWVRPLKGIVAL-----IDEQLIPIEL 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GH FH P + + Y + A V++D + R I ++A + A G Sbjct: 174 DGITSGTETKGHPFHHPDVVTLAKASDYPEKMAAAHVMIDFDARVQKITDEARKAAQKAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L L+ED L +E GL EW +G FD+ YL +P E+I+LT++TNQK F R LA Sbjct: 234 LTLIEDAALAQENAGLTEWPVPLLGRFDEAYLAVPREVIQLTMRTNQKYFACTDRNQDLA 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V++++A DGG I QGN +V++ARL DA FW++D Sbjct: 294 AVFICVADMEAQDGGKEITQGNEKVLSARLADARFFWEQD-------------------- 333 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L PL+ + RLD V+F+ +G+ G++ RI L IA I AD +RA +L+KA Sbjct: 334 LKIPLEDWLPRLD--SVLFYEGMGSVGDKAKRIAHLSGYIADQIGADRKQAERAGLLAKA 391 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA NE A+ + + VSLA Sbjct: 392 DLASNMVGEFPELQGVMGGYYAKAGNEAPDVVSAVSGQYQAEAGAGV------AAAVSLA 445 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------QN 533 D++D+L F+ N +P+GSKDP+ALRRA + II+ I+ +++ +PL+ E ++ Sbjct: 446 DRIDSLACFFVRNIRPTGSKDPFALRRAAVQIIQTIIAHQLRLPLTPLFEKAGAGDQIES 505 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ F +RLK+ + IR+DLI+A+L D+++ ++ ++ L F S G L Sbjct: 506 LLAFITERLKVQQREAGIRYDLIDAVLALGYEDDVIRLLARVQALQSFIESEDGSDLLAG 565 Query: 593 AKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD 652 +R IL E + + + + E+ L + +++++ + Y Sbjct: 566 YRRAVNILKGSEASEKGDISQED----IEQPEQDLQKALQAIEAPLEQALKAEDYAAAMT 621 Query: 653 LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 L S+ +PI+ FFD+V+VN D +R RL+LL+ I+ + V + Sbjct: 622 ALASLRQPIDQFFDKVIVNHDKAGIRSRRLALLEQIRTAMHQVADFS 668 >gi|293610784|ref|ZP_06693084.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827128|gb|EFF85493.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 689 Score = 592 bits (1525), Expect = e-166, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 354/724 (48%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKTLRDALQAETVKGLKDAGLNFASIEAYAAPRRLALKIVD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP V G KA++GF+R G+ + K + Sbjct: 61 IDAAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K +L + Sbjct: 119 LKDVKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVLLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++I+D +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I Sbjct: 169 DDQIVDATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLTALEKAYVVANFEKRQATIQEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 229 VKKLADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 LINSEGKLQPYFITVSNIESKD-PTQIIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A Sbjct: 338 ----------KQPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P Sbjct: 386 EKAALLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 446 KTGTTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNL 505 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F R + D+ + D+++A+ + L + Sbjct: 506 ALQGYGDIVKDHDKTRADAVTFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVN 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + + + KR+ ILA E + L+ AEK L+A + Sbjct: 566 AVNHFRTLPEAAALAAANKRVANILAKEATPE----GSVVEANLVEAAEKALFAELQAVT 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V Sbjct: 622 PVVEPLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAV 681 Query: 696 INVQ 699 +V Sbjct: 682 ADVS 685 >gi|153212966|ref|ZP_01948560.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 1587] gi|124116192|gb|EAY35012.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 1587] Length = 688 Score = 591 bits (1524), Expect = e-166, Method: Composition-based stats. Identities = 201/725 (27%), Positives = 335/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVASL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFIIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAKEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|299768625|ref|YP_003730651.1| glycyl-tRNA synthetase subunit beta [Acinetobacter sp. DR1] gi|298698713|gb|ADI89278.1| glycyl-tRNA synthetase subunit beta [Acinetobacter sp. DR1] Length = 689 Score = 591 bits (1524), Expect = e-166, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 354/724 (48%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + + L + LK+ G+ + + Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKTLRDALQAETVKGLKDAGLNFAAIEAYAAPRRLALKIVD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP V G KA++GF+R G+ + K + Sbjct: 61 IDTAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K +L + Sbjct: 119 LKDVKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVLLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++I+D +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I Sbjct: 169 DDQIVDATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQVTIQEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA V + DLL+E+ LVEW +F++++L +P+E + T++ NQK F Sbjct: 229 VKKLADEVNATAIVPADLLDEVTSLVEWPVALRANFEERFLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 LINAEGKLQPYFITVSNIESKD-PTQIIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A Sbjct: 338 ----------KQPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSPITGANPADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P Sbjct: 386 EKAALLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++DI + + Sbjct: 446 KTGTTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDITIEELVNL 505 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F R + D+ + D+++A+ + L + Sbjct: 506 ALQGYGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVN 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + + + KR+ ILA E + L+ +AEK L+A + Sbjct: 566 AVNHFRTLPEAAALAAANKRVANILAKEAAPE----GSVVEANLVEDAEKALFAELQAVT 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V Sbjct: 622 PAVEPLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAV 681 Query: 696 INVQ 699 +V Sbjct: 682 ADVS 685 >gi|289423934|ref|ZP_06425727.1| glycyl-tRNA synthetase, beta subunit [Peptostreptococcus anaerobius 653-L] gi|289155711|gb|EFD04383.1| glycyl-tRNA synthetase, beta subunit [Peptostreptococcus anaerobius 653-L] Length = 687 Score = 591 bits (1524), Expect = e-166, Method: Composition-based stats. Identities = 219/726 (30%), Positives = 369/726 (50%), Gaps = 65/726 (8%) Query: 1 MPDFLL-EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LL EI EE+P+R + L L L+E+ V ++++ + TP RL L +KGL Sbjct: 1 MNNYLLYEIGVEEMPSRFVQSTLDQLVSGLKSRLEEKRVAFEDIDTFATPRRLILVVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G+ KA GF+R GL KD + A Sbjct: 61 ADRQADLEEEVKGPAKKISIAEDGSFTKAAQGFMRGKGLSESD--VYFKDLNGTEYIFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +R+ + ++VL ++P ++ V +PKSMRW ++RP++ ++ + Sbjct: 119 IREEGKDTDEVLMEVLPEIVKSVVFPKSMRWG-----GKNMRFVRPIRWLVAL-----HN 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K++ +DL+ I N+T GHRF I+V S++ Y + LEE V+ D + R++ I Sbjct: 169 DKVVPVDLEGIIASNVTVGHRFLGAKSIEVSSIEDYFKKLEENFVVYDQDLRKDMIRKQI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++A+++G ++ D++LL+E+ +VE+ F G FDK Y LP+E+++ +K +Q+ F Sbjct: 229 DQVAASIGGKVEMDEELLDEVTYIVEYPTAFYGEFDKSYTELPKEVVKTPMKAHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + L FI V N + GN +V+ ARL DA F+ D+ Sbjct: 289 VGEDSNLLPYFIAVRNG-NDYKIENVKAGNEKVLEARLADAKFFFNEDRQ---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L+ +L+ VVF K+GT ++ RI + K + +D ++ ++ Sbjct: 338 ----------HDLEYYRNKLNT--VVFQEKLGTLLDKSERIYNIAKVYGKEVDVNIEDLE 385 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A +KADL T +V EF ELQG +G +Y+ L+ +N + AI EH PR + VP+ Sbjct: 386 SAAYYAKADLVTNMVFEFDELQGYMGMQYSRLEGKNDTVSKAIYEHYMPRFNGDTVPSTM 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 +S+ DK+DT+ F+AI +P+GS DP+ALRR +GI+ I+LE I+I +++ Sbjct: 446 EGAILSIIDKMDTIAGFFAIGIQPTGSADPFALRRQCIGILTILLEKNIEIDVARLASIS 505 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +N+I FF++R K D IR+D++EA+L + N+ + + Sbjct: 506 LDQYSSVEFDKDSVIENIIEFFNERTKNMFKDMGIRYDVVEAVLASDEKNISDLYVRAEA 565 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 +N++ L++ R+ + E + +I LL + EK LY D + Sbjct: 566 MNKWIDRDSLTDMLVAFNRVSNLAEGAE------TDKIDQALLLEDVEKELYDNFKDVDS 619 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 I + MD K Y + D S+ ++ FFD V+V DD ++R NRL+LL+ I + +L V Sbjct: 620 KISDLMDQKEYTKSLDAFASLKPAVDNFFDNVMVMSDDPKLRANRLALLKNISDSMLKVC 679 Query: 697 NVQKIV 702 ++ KIV Sbjct: 680 DLTKIV 685 >gi|328952742|ref|YP_004370076.1| Glycyl-tRNA synthetase beta subunit [Desulfobacca acetoxidans DSM 11109] gi|328453066|gb|AEB08895.1| Glycyl-tRNA synthetase beta subunit [Desulfobacca acetoxidans DSM 11109] Length = 690 Score = 591 bits (1524), Expect = e-166, Method: Composition-based stats. Identities = 210/727 (28%), Positives = 348/727 (47%), Gaps = 68/727 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D L+EI +EEIPAR E++ + L L++E + + ++ TP RL L + ++ Sbjct: 3 ADLLIEIGTEEIPARFIPPVLEEMKVSLAKRLEQERLAVEVVKTMGTPRRLTLIAQKVAT 62 Query: 62 HSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 E E +GP G +A GF R+ G++ ++ D +G Sbjct: 63 QQAESTAEIIGPPQAVAFGADGQPTQAAFGFARAQGVEVKDLIVVQTD--RGPYLAVKKH 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R + L I+P I + +PKSMRW + ++ RPL I+ + E+ Sbjct: 121 AAGRPAHERLSEILPEWILGLSFPKSMRWGSL-----TVTFARPLHWIVALF-----GEE 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDH--YIRDLEEAMVLLDPECRRNAILNDA 232 +I + +I G +TYGHRF AP I + + D YI L +A VL+ PE RR +L Sbjct: 171 VIPFAVGDITSGRLTYGHRFQAPQAITLATADAEAYINSLRQAQVLVAPEERRAKLLEQL 230 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A++V ++V + +LL+E LVE+ + +G+F++K+L LP++++ +++ +Q+ F Sbjct: 231 QQAAASVQGQIVPNPELLQENTFLVEYPNLTLGNFEEKFLALPDDVLITSMREHQRYFSL 290 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R G L FI V+N A + QG+ RV+ ARL DA+ F++ D+ Sbjct: 291 RDGSGKLMPHFIAVNNTLAR-NPDVVRQGHERVLRARLSDAMFFFQEDR----------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-V 411 LD + L VV+H+ +GT ++++R R L + +A+ + D V Sbjct: 339 ---------KVNLDDWVEALR--GVVYHSLLGTSYDKMARFRSLARYLAERLLPDSITPV 387 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L KADL + +V EFP LQG +G+EYA+L E DAI H PR + +P N Sbjct: 388 HRAATLCKADLVSGMVGEFPSLQGIMGREYALLAGEAPEVADAIWTHYLPRHAGDQLPDN 447 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 + V +AD+LD++ + + P+G+ DPY LRR L II I+ E K + LS Sbjct: 448 PVGAIVGMADRLDSICGCFGVGLIPTGAADPYGLRRQALAIISILGEKKFYLDLSSAVSY 507 Query: 529 --------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +I FF RL L + +++EA+L +++ ++ + Sbjct: 508 SLSLLQDKLTLPVDQTHAEIIEFFRTRLHHLLTGENFSVEVVEAVLTTSFTDIVEAMEKV 567 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L E ++ KR+ I + I P+ AE+ L+ Sbjct: 568 RALEEVRRGLDFPSLAVAFKRVINISRQA------PAAVIKPELFDNTAEQELFQATIAM 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + ++ + Y ++ L ++ P++ FFD+VLV DD +R NRL+LL I L Sbjct: 622 EEVVARALPARDYAEVFKALAALKTPVDRFFDEVLVMTDDLNIRANRLALLVRISQTFLK 681 Query: 695 VINVQKI 701 V + +I Sbjct: 682 VADFSRI 688 >gi|78357076|ref|YP_388525.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552273|sp|Q30ZR6|SYGB_DESDG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|78219481|gb|ABB38830.1| glycyl-tRNA synthetase beta chain [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 696 Score = 591 bits (1523), Expect = e-166, Method: Composition-based stats. Identities = 205/729 (28%), Positives = 329/729 (45%), Gaps = 63/729 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F++EI +EE+PAR ++++ L V + + TP RL L ++ + Sbjct: 1 MSVFVMEIGTEELPARFLSGLEQEIASRFEAALAAANVEFGTLNVQSTPRRLALTIENID 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 E E GP V G KA +GF R+ G + + KG+ Sbjct: 61 AVQREAEEVVSGPPVRIAFDAQGRPTKAAEGFARTQGAELDELFTL--TTDKGEYLAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R ++++L + P I +P+PK M+W + F++ RPL+ +L + +E Sbjct: 119 KTGGRPVQEILSEVAPEIIAALPFPKKMKWGSGD-----FTFGRPLRWVLALFDSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDA 232 ++ + I GN T GHR H P P +V D Y + + V L RR + Sbjct: 170 -VVSFTVAGIVSGNETCGHRVHGPGPFEVSGADAYAGTVRDKCHVTLCAADRRRVTVEGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ G ++ LL+E+ GL E +G FD +L LP E++ +++++QK F Sbjct: 229 DALAAQAGGRILWKDSLLDEVQGLCEHPVPCLGDFDPSFLELPAEVLLTSMESHQKSFGV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V N+ A + +G RV+ ARLEDA FWK D Sbjct: 289 AAADGSLMPHFLTVLNMTP-QNSALVKKGWERVLRARLEDARFFWKAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 L+ D +A+LD +V+F A +G+ G++ R+ L + +A + D Sbjct: 336 --------LASDFDSWLAKLD--NVIFLAPLGSMGDKTRRLERLCRWLAAAVAPDIQEQA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSKADL +E+V EF LQG +G YA + E+ A+ E P GP VP + Sbjct: 386 ARAGRLSKADLVSEMVYEFDSLQGIMGGIYARRKGEDEIVAQAVSEQYLPAGPESPVPDS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S+ADK DTL + ++ P+G+ DPYALRR LGI RI+LE + + + Sbjct: 446 LCGALLSIADKADTLAGCFGLSMIPTGAADPYALRRCALGIARIMLEKGLRFDVRELFRY 505 Query: 532 QN------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L FF RLK + L+EA L D++ Sbjct: 506 AQEGYGERQWKLKPEQAAEKLHEFFVLRLKNLFVSQGHETLLVEAALHAGADDVWAAGAR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAI-EEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ L+ F SA+ + +L+ KR I+ ++++ + EAEK L + Sbjct: 566 LEALDRFSKSAEFGQAVLTFKRAANIIRKQGQEEDGGLDGCYDASLFEDEAEKALAGALE 625 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 D + YH + LL + ++ FFD V+V +D +R NRL+LLQ + + Sbjct: 626 DIAPDFEARWAADDYHALFGLLGVLRPAVDAFFDSVMVMCEDPHIRRNRLNLLQSLVQRL 685 Query: 693 LIVINVQKI 701 + + + Sbjct: 686 GRLADFGAL 694 >gi|261856636|ref|YP_003263919.1| glycyl-tRNA synthetase subunit beta [Halothiobacillus neapolitanus c2] gi|261837105|gb|ACX96872.1| glycyl-tRNA synthetase, beta subunit [Halothiobacillus neapolitanus c2] Length = 692 Score = 591 bits (1523), Expect = e-166, Method: Composition-based stats. Identities = 216/724 (29%), Positives = 352/724 (48%), Gaps = 62/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + + + L+ L+ L+E G+ + + Y P RL + ++ ++ Sbjct: 5 ADFLFELGTEELPPKALLRLSNALTEELLTALREAGLAFGTHQSYAAPRRLAVLIREVAA 64 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +PE+ ER GP + G +A++GF RS G+ + +I+ D KG + Sbjct: 65 STPEQAVERKGPALASAFDAEGKPSRALEGFARSCGVTVDALEKIETD--KGTWLVHRHT 122 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + +++ + A+ K+P PK MRW + +IRP+ + + Sbjct: 123 QPGKTAAEIIPVAIARALDKLPTPKRMRWGSHE-----VEFIRPVHWAVAL-----HGNT 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +ID ++ + G T+GHRFH P I ++S Y LE+ VL D RR+ I Sbjct: 173 VIDTEILGVKAGKETFGHRFHHPAAITIESPASYADVLEKKGFVLADFAARRSKIQAQIE 232 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A +G D DLL+E+ LVEW G F++ +L +P E + T++ NQK F Sbjct: 233 AIARDLGGTARVDDDLLDEVTALVEWPVAVAGKFEESFLQVPHEALISTMQGNQKYFPLV 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + L FI ++NI + AA+ +GN RV+ R DAL FW D+ Sbjct: 293 DVQNRLLPWFITIANIDSK-NPAAVREGNERVIRPRFSDALFFWNEDR------------ 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L+ + L V+F ++G+ ++ R+ L + IA I DVA R Sbjct: 340 --------KHTLESHLESLKT--VIFQQRMGSLFDKTIRVERLAEFIAAQIGGDVAQTRR 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L K DL + +V EFPELQG +G+ A E + A +++ PR +++P + + Sbjct: 390 AARLCKCDLQSHMVGEFPELQGIMGRYLAANDGEPAAVAQAQDDYYLPRRAGDSLPGDAV 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 S V+LAD+LDTL+ +AI + P+G+KDP+ALRRA LG++RII+E ++D+ L +E Sbjct: 450 SQAVALADRLDTLMGIFAIGQAPTGAKDPFALRRAALGVLRIIVEQRLDLDLKSLLEQAA 509 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 Q + F +R Y DR IR D+ A+ + L + + Sbjct: 510 KGLVSVIPEAPGHVQAVFEFITERQYRYSLDRAIRADVFAAVAAVGTTHPLDFEQRMVAV 569 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 NEF + + E KRI IL K+ + + I L AEK L+ ++ Sbjct: 570 NEFLNLPESEPLTAGNKRIQNILK---KQEQPVDGLIQADLLQESAEKALFEAVTKMTPR 626 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 I + + Y L + PI+ FFD+V+V DD +R NRL+LLQ + L + + Sbjct: 627 ITAATAARAYTDALTELAQLRAPIDRFFDEVMVMADDAAIRHNRLALLQQTGALFLSIAD 686 Query: 698 VQKI 701 + ++ Sbjct: 687 LAQL 690 >gi|260433231|ref|ZP_05787202.1| glycyl-tRNA synthetase, beta subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260417059|gb|EEX10318.1| glycyl-tRNA synthetase, beta subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 739 Score = 591 bits (1523), Expect = e-166, Method: Composition-based stats. Identities = 269/764 (35%), Positives = 391/764 (51%), Gaps = 90/764 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL + L E G+ Y + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQTRAGEDLKKRITDGLVEAGLTYAHAHALTTPRRLTLAVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR G+ D ++D KG VY A + KP R Sbjct: 61 AESPTIREERKGPKVGAPDKAIEGFLRGAGIS--RDQLEERDTPKGAVYFATIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL SILCIL E A +++ +++ Sbjct: 119 AEIVAEVLADTIRNFPWPKSMRWGSGQ-----LRWVRPLHSILCILSDE-AGAQVVPMEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V + Y L+ A V+L PE R I NDA LA A G Sbjct: 173 DGITAGDTTEGHRFMAPGRFAVTGFEDYAAKLKRAFVVLSPEERAEHIWNDAQNLAFATG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG D ++L LP E+++ ++K +QK F R Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLMGQIDDEFLDLPPEVLQTSMKEHQKFFSVRNPNTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D + + A Sbjct: 293 ERFITVANRETTDNGATILAGNQKVLSARLADAKFFWENDLRVAKSDITQWTRA------ 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+GTQ +R+ RI L +++A + AD ++A L+KA Sbjct: 347 -------------LENVTFHNKLGTQAQRIERIAALARELAPVTGADPDQAEKAARLAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y E+ + +EH P GP ++VPT +S+TV+LA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYIEAAGEDAAVAAVAQEHYSPLGPSDDVPTAPLSVTVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------------- 525 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR+IL N + + L Sbjct: 454 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLILNNDLRLKLGGILDAQLVRAEVAS 513 Query: 526 ---------SQFIEDQNLILFFHDRLKLYLHDRDIRH-----DLIEAILRPENDNLLTIV 571 + +E+ F ++ +H + + D L Sbjct: 514 NDAVHDEHVADLLEEIAQHGVFGAAFRVVKEKLAGKHLSDILHMERKVPDATQDLLSFFH 573 Query: 572 DLIKH-----------------------LNEFFSSAKGEKFLLS----------AKRIFQ 598 D +K +N A+ +++ KR Sbjct: 574 DRLKVFLRDEGIRHDVIDACIAMDGNDDINLLVKRARALNVVIATEDGENLVQGFKRANN 633 Query: 599 ILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL E+K+ E S P++ ++EK L+A + + I ++ + + + ++ Sbjct: 634 ILTQAEEKDGVEYSFGADPKFAETDSEKALFAALDEAQAKIASALAAEDFPAAMAAMAAL 693 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FF+ V VN D+ +R NRL+LL I+ I V ++ KI Sbjct: 694 RGPIDAFFEDVQVNSDNPVLRRNRLNLLSQIRQICSSVADLTKI 737 >gi|260556987|ref|ZP_05829204.1| glycyl-tRNA synthetase beta subunit [Acinetobacter baumannii ATCC 19606] gi|260409593|gb|EEX02894.1| glycyl-tRNA synthetase beta subunit [Acinetobacter baumannii ATCC 19606] Length = 689 Score = 590 bits (1522), Expect = e-166, Method: Composition-based stats. Identities = 203/724 (28%), Positives = 354/724 (48%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + + L + L E G+ + ++ Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKTLRDALQAETVKGLNEAGLDFASVEAYAAPRRLALKIVD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP V G KA++GF+R G+ + K + Sbjct: 61 VDAAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + Sbjct: 119 LKDVKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++I+ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I Sbjct: 169 DDQVIEATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 229 VKKLADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 LINAEGKLQPYFITVSNIESKD-PTQIIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A Sbjct: 338 ----------KQPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P Sbjct: 386 EKAALLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 446 KTGTTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNL 505 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F R + D+ + D+++A+ + L + Sbjct: 506 ALQGYGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVN 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + + + KR+ ILA E + L+ +AEK L+A + Sbjct: 566 AVNHFRTLPEAAALAAANKRVANILAKEAAPE----GSVVEANLVEDAEKALFAELQAVT 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V Sbjct: 622 PVVEPLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAV 681 Query: 696 INVQ 699 +V Sbjct: 682 ADVS 685 >gi|87200127|ref|YP_497384.1| glycine--tRNA ligase [Novosphingobium aromaticivorans DSM 12444] gi|87135808|gb|ABD26550.1| glycyl-tRNA synthetase beta chain [Novosphingobium aromaticivorans DSM 12444] Length = 738 Score = 590 bits (1522), Expect = e-166, Method: Composition-based stats. Identities = 256/766 (33%), Positives = 373/766 (48%), Gaps = 99/766 (12%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFLLE+ SEEIPARMQ A DL + L G+ + + TP RL L + L Sbjct: 4 ADFLLELRSEEIPARMQAGARADLEKLFRKELDAAGLKAGEVTVWSTPRRLALIARALPL 63 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 + EE GPR A ++A++GFLR TGL D ++D V+ AV KP R Sbjct: 64 ATEAVSEEVKGPRTSAPEQALEGFLRKTGLT--RDQLTERDG----VWFAVTEKPGRATR 117 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 DVL VP I+ PWPKS RW + W+RPL I+ IL + +++ ++ Sbjct: 118 DVLAEAVPAIIRAFPWPKSQRWGAASLSTESLRWVRPLSGIVAIL-----GDDLVECEIG 172 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 + G T GHRFH P I + S Y L V++D R + + A A A GL Sbjct: 173 AVKSGYATRGHRFHCPGEITIGSAHDYADKLRACHVIVDHVEREAMVRDKAKAAAEAAGL 232 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 LVED+ L+ E GL EW +G FD+ +L +P E+I+LT + NQK F+ R G LAN Sbjct: 233 VLVEDEGLVIENAGLTEWPVPLLGRFDEAFLDVPPEVIQLTARVNQKYFICRDSAGKLAN 292 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F+ +NI+A DGGAAIV GN +V+AARL DA FW++D+ Sbjct: 293 AFVCTANIEAKDGGAAIVDGNRKVLAARLSDARFFWEQDK-------------------- 332 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---IDADVALVDRAIVLS 418 KPL ++ +L + FH K+GT ++V R+ L + +A + D AL +A L Sbjct: 333 KKPLAEQAQKLSR--ITFHEKLGTVADKVQRVVKLAEWLASEGIVPNCDPALARQAAELC 390 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G YA + + DAI +H KP G ++VPT +++ V+ Sbjct: 391 KADLVTEMVGEFPELQGLMGGYYARAEGLPDAVADAIRDHYKPVGQGDDVPTAPVTVAVA 450 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------- 530 LADKLDTL+ F+ I+++P+GS+DP+ALRRA LG++ ++ + + + + I Sbjct: 451 LADKLDTLVGFFLIDQRPTGSRDPFALRRAALGVLELLNWGSLRVSMWEAIAKALAAFTK 510 Query: 531 ----------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNL 567 L FF DRLK+ + +RHDLI+A+ D+L Sbjct: 511 QLVSDDMAEASYEAFQTNQKAVFTTLPDFFADRLKVQQREAGVRHDLIDAVFALGGEDDL 570 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-----------EISLEISP 616 + ++ + L F + G L KR IL E + E P Sbjct: 571 VRLLARVHALQAFVGTEDGTNLLAGYKRAANILKKEGFAANPNAGSEGEGVVPPTGEEDP 630 Query: 617 QYLL---------------------LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 L+ AE+ L + + +++ + + +L Sbjct: 631 LVLVDDPAMEGVVAQFSHPECNYQREPAEQALVDALDYAEPAARGAVESEDFDFAMRVLA 690 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 S+ PI+ FFDQV VN D R +RL+LL + + V + +I Sbjct: 691 SLRAPIDSFFDQVTVNDADANKRSSRLALLDRFRAAVHKVADFSRI 736 >gi|260549881|ref|ZP_05824097.1| glycyl-tRNA synthetase [Acinetobacter sp. RUH2624] gi|260407131|gb|EEX00608.1| glycyl-tRNA synthetase [Acinetobacter sp. RUH2624] Length = 689 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 353/724 (48%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + + L + L E G+ + ++ Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKTLRDALQAETVKGLNEAGLNFASVEAYAAPRRLALKIVD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP V G KA++GF+R G+ K + Sbjct: 61 VDAAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITADQLSTFH--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K +L + Sbjct: 119 LKDVKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVLLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++I+D +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I Sbjct: 169 DDQIVDATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLEALEKAYVVANFEKRQATIQEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 229 VKKLADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 LINAEGKLQPYFITVSNIESKD-PTQIIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A Sbjct: 338 ----------KQPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P Sbjct: 386 EKAALLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 446 KTGTTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNL 505 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F R + D+ + D+++A+ + L + Sbjct: 506 ALQGYGNIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVN 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + + + KR+ ILA E + L+ +AEK L+A + Sbjct: 566 AVNHFRTLPEAAALAAANKRVANILAKEAAPE----GSVVEANLVEDAEKALFAELQALT 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V Sbjct: 622 PVVEPLLAAKDYTAALSKLAALRAPIDAFFDSVMVMADDADLKANRLRLLAQLRNLFTAV 681 Query: 696 INVQ 699 +V Sbjct: 682 ADVS 685 >gi|258593379|emb|CBE69718.1| glycine tRNA synthetase, beta subunit [NC10 bacterium 'Dutch sediment'] Length = 689 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 216/725 (29%), Positives = 358/725 (49%), Gaps = 66/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI EEIP+ A +DL+ L +E + + +R + TP RL L+++ L + Sbjct: 4 DLLFEIGIEEIPSGYLTPALKDLATQARRLFEEHRIAFTGVRTFGTPRRLTLHVERLDQN 63 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E +GP G KA GF R G+ K +G+ +A + + Sbjct: 64 QGDLVREVVGPSRAAAFDQEGRPTKAALGFARGQGVPVEQ--LRVKTLDRGEYVVAAIVE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++++L ++P I + +PKSMRW AF ++RP++ ++ + ++ Sbjct: 122 QGARLDEILPVVLPRLITSLSFPKSMRWG-----QGAFRFVRPIRWLVALYSG-----RV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++ + GN T GHRF + I+V++ YI LEE V+++ RR + A Sbjct: 172 IPFEIDGVISGNKTCGHRFLSRGQIRVRNFQDYIEKLEERYVIVNQHRRRELVTRLAKEA 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ VG + V D +L+E + LVE+ G F+++YL LP E+I ++ +Q+ F Sbjct: 232 AAKVGGKPVFDDELVEMVASLVEYPTAVCGGFEQEYLSLPREVIMTPMRKHQRYFPVTDD 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+ +SN++A D G I GN RV+ ARL+DA F+ D+ Sbjct: 292 AGKLLPYFVTISNMKAKDMG-LIRAGNERVLRARLKDAAFFFTEDRRLE----------- 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALVDRA 414 L +R+ +L + F ++GT E+V R+ L +A+ + +A Sbjct: 340 ---------LHERVPQLR--GITFQERLGTMLEKVGRLTELTAYLAEQVAPHLAHDACQA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL T +V+EFP LQG +G+EYA L E AIEEH PR + +P + + Sbjct: 389 AQLCKADLVTTMVKEFPSLQGVMGREYAQLSGEPAVVAQAIEEHYLPRFSGDRLPESLVG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V +AD+LDT+ + I P+GS+DPYALRR GII+I+L ID+PLSQ I Sbjct: 449 ALVGIADRLDTICGCFGIGLIPTGSEDPYALRRHAQGIIQILLNAGIDLPLSQPIYKSLD 508 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 Q ++ F RL+ L +R + DL+EA L + + + + L Sbjct: 509 LLSDRVTLPRERVAQEVMEFLAARLQAILMERGVPGDLVEAALSVDAERVSDAGKRAEAL 568 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 F A + + KR+ +IL + S + P+ + AE+ L+ + Sbjct: 569 ATFRREADFTELAAAFKRVIRILPK------DFSKPVDPRRFVSSAERALHGEAATLRAE 622 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + M Y + L+ +I +++FF++VLV V+DR+++DNRL++L+ + ++ + N Sbjct: 623 TEPLMQSGDYVRALQLIAAIRPIVDMFFEEVLVMVEDRDLQDNRLAILKEVADLFCGIAN 682 Query: 698 VQKIV 702 KI+ Sbjct: 683 FSKIM 687 >gi|326573918|gb|EGE23868.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis O35E] Length = 692 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 213/728 (29%), Positives = 349/728 (47%), Gaps = 65/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V G +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ I+ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWIVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +ID ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIDATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 341 ------------KQPLFELSHHLKTQ--IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 ED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQKI 701 V ++ + Sbjct: 683 SVADIGLL 690 >gi|326565638|gb|EGE15801.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 12P80B1] Length = 692 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 212/728 (29%), Positives = 349/728 (47%), Gaps = 65/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V G +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ ++ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWVVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +ID ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIDATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 341 ------------KQPLFELNHHLKTQ--IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 ED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQKI 701 V ++ + Sbjct: 683 SVADIGLL 690 >gi|184159639|ref|YP_001847978.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii ACICU] gi|332876124|ref|ZP_08443908.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6014059] gi|238691009|sp|B2HZR3|SYGB_ACIBC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|183211233|gb|ACC58631.1| Glycyl-tRNA synthetase, beta subunit [Acinetobacter baumannii ACICU] gi|322509549|gb|ADX05003.1| glyS [Acinetobacter baumannii 1656-2] gi|323519569|gb|ADX93950.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii TCDC-AB0715] gi|332735742|gb|EGJ66785.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6014059] Length = 689 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 203/724 (28%), Positives = 354/724 (48%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + + L + L E G+ + ++ Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKTLRDALQAETVKGLNEAGLDFASVEAYAAPRRLALKIVD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP V G KA++GF+R G+ + K + Sbjct: 61 VDAAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + Sbjct: 119 LKDVKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++I+ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I Sbjct: 169 DDQVIEATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 229 VKKLADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 LINAEGKLQPYFITVSNIESKD-PTQIIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A Sbjct: 338 ----------KQPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P Sbjct: 386 EKAALLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 446 KTGTTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNL 505 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F R + D+ + D+++A+ + L + Sbjct: 506 ALQGYGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVN 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + + + KR+ ILA E + L+ +AEK L+A + Sbjct: 566 AVNHFRTLPEAAALAAANKRVANILAKEAAPE----GSVIEANLVEDAEKALFAELQAVT 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V Sbjct: 622 PVVEPLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAV 681 Query: 696 INVQ 699 +V Sbjct: 682 ADVS 685 >gi|169794555|ref|YP_001712348.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AYE] gi|213158873|ref|YP_002320871.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter baumannii AB0057] gi|215482143|ref|YP_002324325.1| Glycyl-tRNA synthetase beta chain(Glycine--tRNA ligasebeta chain) (GlyRS) [Acinetobacter baumannii AB307-0294] gi|301348164|ref|ZP_07228905.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB056] gi|301511530|ref|ZP_07236767.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB058] gi|301595664|ref|ZP_07240672.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB059] gi|332856634|ref|ZP_08436243.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013150] gi|332868664|ref|ZP_08438311.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013113] gi|226737044|sp|B7GVW2|SYGB_ACIB3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226737045|sp|B7IA77|SYGB_ACIB5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238688065|sp|B0V7W2|SYGB_ACIBY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169147482|emb|CAM85343.1| glycyl-tRNA synthetase, beta chain [Acinetobacter baumannii AYE] gi|213058033|gb|ACJ42935.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter baumannii AB0057] gi|213988471|gb|ACJ58770.1| Glycyl-tRNA synthetase beta chain(Glycine--tRNA ligasebeta chain) (GlyRS) [Acinetobacter baumannii AB307-0294] gi|332727027|gb|EGJ58517.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013150] gi|332733236|gb|EGJ64431.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013113] Length = 689 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 202/724 (27%), Positives = 353/724 (48%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + + L + L E G+ + ++ Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKTLRDALQAETVKGLNEAGLNFASVEAYAAPRRLALKIVD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP V G KA++GF+R G+ + K + Sbjct: 61 VDAAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVEQLSTFQ--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + Sbjct: 119 LKDVKGQSLDTLLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++I+ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I Sbjct: 169 DDQVIEATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 229 VKKLADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 LINAEGKLQPYFITVSNIESKD-PTQIIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A Sbjct: 338 ----------KQPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P Sbjct: 386 EKAALLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K T++L+D+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 446 KTGTTIALSDRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNL 505 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F R + D+ + D+++A+ + L + Sbjct: 506 ALQGYGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVN 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + + + KR+ ILA E + L+ +AEK L+A + Sbjct: 566 AVNHFRTLPEAAALAAANKRVANILAKEATPE----GSVVEANLVEDAEKALFAELQAVT 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + K Y L ++ PI+ FFD V+V DD ++ NRL LL ++N+ V Sbjct: 622 PVVEPLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDAGLKANRLRLLAQLRNLFTAV 681 Query: 696 INVQ 699 +V Sbjct: 682 ADVS 685 >gi|326574910|gb|EGE24840.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 101P30B1] Length = 692 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 209/728 (28%), Positives = 348/728 (47%), Gaps = 65/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V G +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I ++RP+ ++ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFVRPVHWVVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++L +E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELFDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 341 ------------KQPLFELNHHLKTQ--IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 ED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQKI 701 V ++ + Sbjct: 683 SVADIGLL 690 >gi|326567137|gb|EGE17259.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis BC1] Length = 692 Score = 590 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 212/728 (29%), Positives = 349/728 (47%), Gaps = 65/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V G +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ I+ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWIVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 341 ------------KQPLFELNHHLKTQ--IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 ED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQKI 701 V ++ + Sbjct: 683 SVADIGLL 690 >gi|153830859|ref|ZP_01983526.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 623-39] gi|148873669|gb|EDL71804.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 623-39] Length = 688 Score = 590 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 200/725 (27%), Positives = 335/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVTNL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFSGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + ++ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGKLGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|239503276|ref|ZP_04662586.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB900] Length = 689 Score = 590 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 203/724 (28%), Positives = 354/724 (48%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + + L + L E G+ + ++ Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKTLRDALQAETVKGLNEAGLNFASVEAYAAPRRLALKIVD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP V G KA++GF+R G+ + K + Sbjct: 61 VDAAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVEQLSTFQ--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + Sbjct: 119 LKDVKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++I+ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I Sbjct: 169 DDQVIEATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 229 VKKLADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 LINAEGKLQPYFITVSNIESKD-PTQIIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A Sbjct: 338 ----------KQPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P Sbjct: 386 EKAALLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 446 KTGTTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNL 505 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F R + D+ + D+++A+ + L + Sbjct: 506 ALQGYGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVN 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + + + KR+ ILA E + L+ +AEK L+A + Sbjct: 566 AVNHFRTLPEAAALAAANKRVANILAKEAAPE----GSVIEANLVEDAEKALFAELQAVT 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V Sbjct: 622 PVVEPLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAV 681 Query: 696 INVQ 699 +V Sbjct: 682 ADVS 685 >gi|326560538|gb|EGE10919.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 103P14B1] gi|326576238|gb|EGE26153.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis CO72] Length = 692 Score = 590 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 210/728 (28%), Positives = 349/728 (47%), Gaps = 65/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V G +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I ++RP+ ++ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFVRPVHWVVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 341 ------------KQPLFELNHHLKTQ--IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 ED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQKI 701 V ++ + Sbjct: 683 SVADIGLL 690 >gi|330447264|ref|ZP_08310914.1| glycyl-tRNA synthetase, &beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491455|dbj|GAA05411.1| glycyl-tRNA synthetase, &beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 689 Score = 590 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 214/723 (29%), Positives = 344/723 (47%), Gaps = 62/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FL+E+ +EE+P + AE + LK + + ++ Y P RL L + GL+ Sbjct: 4 KNFLIELGTEELPPKALRTLAEAFAANFEAELKAADLPHDGIKWYAAPRRLALKVTGLAE 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + P+K+ E+ GP + G KA G+ R G+ ++ D KG+ L Sbjct: 64 NQPDKVVEKRGPAIASAFDADGNPTKAAQGWARGNGITVDQAERMVTD--KGEWLLFKQE 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + +L + A+ K+P P+ MRW + +IRP+K++ +L ++ Sbjct: 122 VKGQPAQTLLPELAAAALAKLPIPRPMRWGDKDT-----QFIRPVKTLTMLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAH 233 +++ + + GHRF + + D Y LE V+ D E R+ I+ DA Sbjct: 172 LVEGTILGVASARTIRGHRFMGEAEFTIDNADQYPAILEERGKVMADYEARKAIIVADAQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A AVG + DL+EE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 232 KAAQAVGGTADLEDDLVEEVTSLVEWPVVLTASFEEKFLKVPSEALVYTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI VSNI ++D + I+ GN +VV RL DA F+ D Sbjct: 292 DAEGKLVPKFIFVSNIISND-PSQIISGNEKVVRPRLADAEFFFNTD------------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L L R+ +L+ +F ++GT ++ RI L IA I ADV R Sbjct: 338 -------LKSKLIDRLPQLETA--IFQKQLGTIKDKTDRITELAGYIADKIGADVDNAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 389 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEQEDVALALNEQYMPRFAGDQLPSTPV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN D+ L + Sbjct: 449 SSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYDLDLVDLVAKAH 507 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 D ++I F R + + D D+I+A+L +K ++ Sbjct: 508 SLFGDKLTNNNVDSDVIEFMLGRFRAWYQDAGFSIDVIQAVLAMHPTQPADFDKRVKAVS 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F E + KR+ ILA K + E+ + L+ AEK L ++ + + Sbjct: 568 HFRELDAAESLAAANKRVGNILA---KFDGELPTTVDNSLLVEAAEKELAEKVTAVVSAL 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y L S+ EP++ FFD V+V DD +++ NRL+LL ++N L V ++ Sbjct: 625 EPVFAAGDYQTALTELASLREPVDAFFDNVMVMADDEKLKVNRLALLNLLRNQFLKVADI 684 Query: 699 QKI 701 + Sbjct: 685 SLL 687 >gi|241668636|ref|ZP_04756214.1| glycine--tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877169|ref|ZP_05249879.1| glycyl-tRNA synthetase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843190|gb|EET21604.1| glycyl-tRNA synthetase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 695 Score = 590 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 216/725 (29%), Positives = 362/725 (49%), Gaps = 60/725 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + AE L + LK+ V + + + +P RL +K L+ Sbjct: 6 KDFLFELGTEELPPKALRGLAESLLNSVETQLKDAKVGFGGTKWFASPRRLSFIIKDLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G K GF S G++ +I+ KGD + Sbjct: 66 SQEDIVVEKQGPLVSIAYKDGEPTKVALGFASSCGVELDQLDRIE--TPKGDKLFYKTIQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L +L+ I+ A++++P PK MRW S ++RP+ +L + +I Sbjct: 124 SGQLTVSLLQEIITKALKQLPIPKMMRWGD-----SVVEFVRPVHWVLALY-----GNEI 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + + Y R L EA VL+D E R+ ++ A ++ Sbjct: 174 VDIEILGHKASNITYGHRFHHPDAISINEIAEYERLLAEAKVLIDWEQRKQMLIEQAKKI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+ +L +P+E + +++ +QKCF Sbjct: 234 AKENNYKVVLDDDLVEEVCAIVEYPNAMLCSFNNDFLRVPQEALISSMEEHQKCFALLDC 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 + L FI +SNI++ + GN +V+ ARL DA F+ D Sbjct: 294 DNNLVANFITISNIESK-KPELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L K L+Q + RL+ +V F K+G ++ RI +K+A L + D RA Sbjct: 338 -----LKKSLEQLLPRLE--NVTFQNKLGNMYQKAQRIANTAQKLADLNNVDSQQAYRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL +++V EF +LQG IGK YA E DAIE+ P+ +P ++ Sbjct: 391 LLAKADLISDMVFEFTDLQGIIGKYYAKAHGETDIVADAIEQQYWPKYSGAELPRTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ + I +KP+G+KDP+ALRR+ +GI+RI+ + IDI L + IE Sbjct: 451 CVALAEKLDTLVGIFGIGQKPTGNKDPFALRRSAIGILRILRDTNIDIALEKVIEIALDS 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ F DRLK D + ++ E+++ + D++ I + Sbjct: 511 YKEVNNLEFSSDIKAEVVSFCLDRLKNLYKDEGVAVNIFESVINTKYDSIKDFAARIIAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS-PQYLLLEAEKRLYAVISDFGT 636 F S+ K + + S KR+ IL ++++ S I + E E L I + Sbjct: 571 TSFISTDKAQSLIASNKRVANILIKNASEDKKYSYNIEIAKTAGNEYELALAYSIEEISA 630 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + ++ Y+ +LL + + I FF+ V+V DD VRDNR++LL I + + V Sbjct: 631 DLDKYLGNREYNYALELLTCLDKVIAEFFENVMVMDDDASVRDNRIALLATIHKMFVGVA 690 Query: 697 NVQKI 701 ++ K+ Sbjct: 691 DISKL 695 >gi|117618734|ref|YP_854662.1| glycyl-tRNA synthetase subunit beta [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166227909|sp|A0KEJ9|SYGB_AERHH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|117560141|gb|ABK37089.1| glycyl-tRNA synthetase, beta subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 689 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 212/723 (29%), Positives = 342/723 (47%), Gaps = 61/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI + E+P + AE + L L + + + ++ + +P RL L + L+ Sbjct: 4 HTFLVEIGTAELPPKALRSLAEAFADNLKSELTKADLAFGDVEWFASPRRLALKVSELAG 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P K E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 64 EQPSKSVEKRGPAVAQAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHTAK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +D+L +V A+ K+P PK MRW ++RP+ ++ +L E Sbjct: 122 VEGRPAKDLLGELVSQALAKLPIPKMMRWGD-----KTIQFVRPVFTVTLLLDGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAH 233 ++ + I GHRF + + Y + L+E V+ D R+ I DA Sbjct: 172 LVPAHILGIDSARTLRGHRFMGESEFTIDNASQYPQILQERGMVIADFMARKVKIKADAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A G D LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 232 AAAAAFGGVADLDDALLEEVTALVEWPVVLTANFEEKFLAVPAEALVHTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI V+NI++ D + I+ GN +VV RL DA F+K D Sbjct: 292 DKNGKLLPKFIFVTNIESKD-PSQIISGNEKVVRPRLSDAEFFFKTD------------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L + L R+ RL+ V+F ++GT +V RI + IA+ I ADVA R Sbjct: 338 -------LKQTLASRLPRLET--VLFQQQLGTVKAKVERIETVAGFIAERIGADVAQAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ + A+ E PR + +P+ + Sbjct: 389 AGLLSKCDLMTNMVGEFTDTQGVMGMHYARHDGEDEAVAVALNEQYMPRFAGDALPSGLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + V+LADK DTL + I P G KDP+ALRRA +G +RI+ E ++D+ L + +E+ Sbjct: 449 ACAVALADKFDTLAGIFGIGMLPKGDKDPFALRRAAIGALRIMTEKQLDLDLVELVEEAV 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F R + D I D++ A+L L +K ++ Sbjct: 509 RVYGDKLTNKTVVTDVVDFMLGRFRAAYQDEGIGADVVLAVLARRPTRPLDFDRRVKAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F S + KR+ ILA K E+ + P+ L+ AEK L +++ + Sbjct: 569 HFRSLDAALALAAANKRVSNILA---KVEGELPTAVKPELLVDAAEKALATQVAELQAEL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y L ++ EP++ FF++V+V DD ++ NRL+LL ++N+ L V ++ Sbjct: 626 APLFAAGDYQAALTRLAALREPVDTFFNEVMVMADDEALKANRLALLNNLRNLFLQVADI 685 Query: 699 QKI 701 + Sbjct: 686 SLL 688 >gi|326561407|gb|EGE11757.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 46P47B1] gi|326572304|gb|EGE22299.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis BC8] Length = 692 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 211/728 (28%), Positives = 349/728 (47%), Gaps = 65/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V G +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ ++ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWVVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 341 ------------KQPLFELNHHLKTQ--IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 ED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQKI 701 V ++ + Sbjct: 683 SVADIGLL 690 >gi|238685535|sp|A3M9C2|SYGB_ACIBT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|193078508|gb|ABO13516.2| glycyl-tRNA synthetase beta chain [Acinetobacter baumannii ATCC 17978] Length = 689 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 203/724 (28%), Positives = 354/724 (48%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + + L + L E G+ + ++ Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKTLRDALQAETVKGLNEAGLDFASVEAYAAPRRLALKIVD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP V G KA++GF+R G+ + K + Sbjct: 61 VDAAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + Sbjct: 119 LKDVKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++I+ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I Sbjct: 169 DDQVIEATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 229 VKKLADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 LINAEGKLQPYFITVSNIESKDSTQ-IIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A Sbjct: 338 ----------KQPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P Sbjct: 386 EKAALLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 446 KTGTTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNL 505 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F R + D+ + D+++A+ + L + Sbjct: 506 ALQGYGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVN 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + + + KR+ ILA E + L+ +AEK L+A + Sbjct: 566 AVNHFRTLPEAAALAAANKRVANILAKEAAPE----GSVIEANLVEDAEKALFAELQAVT 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V Sbjct: 622 PVVEPLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAV 681 Query: 696 INVQ 699 +V Sbjct: 682 ADVS 685 >gi|169632311|ref|YP_001706047.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii SDF] gi|238688157|sp|B0VQA1|SYGB_ACIBS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169151103|emb|CAO99765.1| glycyl-tRNA synthetase, beta chain [Acinetobacter baumannii] Length = 689 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 203/724 (28%), Positives = 355/724 (49%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + + L + + L E G+ + ++ Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKTLRDALQVETVKGLNEAGLNFASVEAYAAPRRLALKIVD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP V G KA++GF+R G+ + K + Sbjct: 61 VDAAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVEQLSTFQ--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + Sbjct: 119 LKDVKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++I+ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I Sbjct: 169 DDQVIEATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 229 VKKLADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 LINAEGKLQPYFITVSNIESKD-PTQIIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A Sbjct: 338 ----------KQPLASRKEKL--TNMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P Sbjct: 386 EKAALLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 446 KTGTTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNL 505 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F R + D+ + D+++A+ + L + Sbjct: 506 ALQSYGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVN 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + + + KR+ ILA E + L+ +AEK L+A + Sbjct: 566 AVNHFRTLPEAAALAAANKRVANILAKEAASE----GSVVEANLVEDAEKALFAELQAVT 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V Sbjct: 622 PVVEPLLTAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAV 681 Query: 696 INVQ 699 +V Sbjct: 682 ADVS 685 >gi|262166791|ref|ZP_06034528.1| glycyl-tRNA synthetase beta chain [Vibrio mimicus VM223] gi|262026507|gb|EEY45175.1| glycyl-tRNA synthetase beta chain [Vibrio mimicus VM223] Length = 688 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 201/725 (27%), Positives = 336/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAKQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLNVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|326562179|gb|EGE12507.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 7169] Length = 692 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 211/728 (28%), Positives = 349/728 (47%), Gaps = 65/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V G +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ ++ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWVVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 341 ------------KQPLFELSHHLKTQ--IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 ED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQKI 701 V ++ + Sbjct: 683 SVADIGLL 690 >gi|229515941|ref|ZP_04405398.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae TMA 21] gi|229347041|gb|EEO12003.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae TMA 21] Length = 693 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 201/730 (27%), Positives = 335/730 (45%), Gaps = 68/730 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVDMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TR-----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYSHKMGDANKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR----- 342 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 +PL R+ L+ + +F ++GT ++ RI L IA+ I A Sbjct: 343 ---------------KRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGA 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 DV RA +L+K DL T +V EF + QG +G YA E A+ E PR + Sbjct: 386 DVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+ +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L Sbjct: 446 ELPSRGVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLV 504 Query: 527 QFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 I Q +I F R + D D+I+A+L Sbjct: 505 DLIAKAKSLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 QRVKAVSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ Sbjct: 622 EIMAEALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNL 681 Query: 692 ILIVINVQKI 701 L + ++ + Sbjct: 682 FLQIADISLL 691 >gi|56696243|ref|YP_166600.1| glycyl-tRNA synthetase subunit beta [Ruegeria pomeroyi DSS-3] gi|56677980|gb|AAV94646.1| glycyl-tRNA synthetase, beta subunit [Ruegeria pomeroyi DSS-3] Length = 735 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 268/760 (35%), Positives = 400/760 (52%), Gaps = 86/760 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL + L E G+ Y TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAGEDLKKRITDGLVEAGLTYAYAAALSTPRRLVLAVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP + EER GP+VGA ++A++GFLR G+ D +++ KG +Y A + KP R Sbjct: 61 DASPTQREERKGPKVGAPEQAVEGFLRGAGIS--RDQLEERETPKGAIYFATIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ ++ I+ PWPKSMRW + W+RPL+SILCIL E A +++ LD+ Sbjct: 119 AAIVAEVLEDTIRNFPWPKSMRWGAG-----SLRWVRPLQSILCILTTE-AGAEVVPLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V S + Y L+ A V+LDP R I NDA +A A G Sbjct: 173 DGIKAGDSTAGHRFMAPARFSVTSFEDYQVKLKRAFVVLDPAERAEHIWNDAQNMAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDK LL E+ GLVEW V MG ++L LP E+++ +++ +QK F R + Sbjct: 233 LELVEDKGLLAEVAGLVEWPVVLMGQIGSEFLDLPAEVLQTSMREHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW D Sbjct: 293 ERFVTVANRETADNGATILAGNQKVLSARLADAKFFWDNDLRAAHA-------------- 338 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +D + L+ +V FH K+G+QG+R+ RI L +++A ++ A+ ++A L+KA Sbjct: 339 ---GMDAWVQALE--NVTFHNKLGSQGDRIRRIAALARELAPVVGAEADQAEQAATLAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y ++ + ++H P GP + VPT +S+ V+LA Sbjct: 394 DLSSEMVFEFPELQGLMGRYYIAASGQDAAIAAVAQDHYSPLGPSDEVPTAPLSVIVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + +PL + I+ Q Sbjct: 454 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLANDLRLPLDRSIDAQLLRHKYHA 513 Query: 533 --------NLILFFHD-----RLKLYLHDRDIRHDLIEA----ILRPENDNLLTIVDLIK 575 +LI D + ++ +EA + D L I D +K Sbjct: 514 SNGEAALRDLIEEIADHGVFGAAFETIKEKLGDAGALEALAGDVPDLSADLLAFIHDRLK 573 Query: 576 ---------------------------------HLNEFFSSAKGEKFLLSAKRIFQILAI 602 LN ++ GE + KR IL Sbjct: 574 VFLRDEGIRHDVIDACIAMAGNDDLNLLVKRARALNTVIATEDGENLVQGFKRANNILTQ 633 Query: 603 EEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 E+K+ E S ++ ++EK L+A + + I ++ + + + ++ P+ Sbjct: 634 AEEKDGVEYSFGADIKFAEADSEKALFAALEQAESKINVALKAEDFAAAMTAMAALRAPV 693 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + FFDQV VN D++ VR NRL+LL I+ + V ++ +I Sbjct: 694 DAFFDQVQVNSDNQVVRRNRLNLLSQIRKVCSSVADLTRI 733 >gi|326568416|gb|EGE18496.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis BC7] Length = 692 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 211/728 (28%), Positives = 349/728 (47%), Gaps = 65/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V G +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ ++ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWVVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + D+Y L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADYYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 341 ------------KQPLFELSHHLKTQ--IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDQLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGIALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 ED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQKI 701 V ++ + Sbjct: 683 SVADIGLL 690 >gi|148265692|ref|YP_001232398.1| glycyl-tRNA synthetase subunit beta [Geobacter uraniireducens Rf4] gi|189082268|sp|A5G7Q7|SYGB_GEOUR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|146399192|gb|ABQ27825.1| glycyl-tRNA synthetase beta chain [Geobacter uraniireducens Rf4] Length = 688 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 199/725 (27%), Positives = 331/725 (45%), Gaps = 66/725 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + LEI +EEIPA KA ++ ++ L + + ++ TP RL L + ++ Sbjct: 3 KELFLEIGTEEIPAGFLPKAMAEMEGLIRKELDNARIAFGEVKAMATPRRLALVVSQVAG 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + +GP G +A +GF R G++ + + +KG+ + Sbjct: 63 QQADAEITAMGPAKKVAFNEDGTPTRAGEGFARGQGVEPSALSIVV--TEKGEYVAVTKK 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L I+P I + + KSMRW + RP+ I+ + Sbjct: 121 ETGVPTVGLLGEILPRLINNISFKKSMRWGDLD-----VRFARPVHWIVALFDGI----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ I G ++ GHRF A V+ HY+ + E V+ DP R+ I + HR Sbjct: 171 VVPFSFGNIESGTMSRGHRFMANTSFPVRDFTHYLDECERHFVIPDPAKRKEIIRREIHR 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A A G L+ D+ LLE++ LVE+ G+F ++L +P E++ +++ +Q+ F Sbjct: 231 VAKAAGGRLLPDEGLLEQVTYLVEYPSAVHGTFSAEFLVVPREVLITSMREHQRYFSLVD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++N D + +V+GN RV+ ARL DA F+ D+ Sbjct: 291 DNGKLLPGFITINNTLTED-PSVVVKGNERVLRARLSDARFFFDEDK------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALVDR 413 PL+ R+ L V++ AK+GT E++ R R L + +A+ + V + Sbjct: 337 -------KVPLENRVESLK--SVLYQAKLGTSYEKMERFRALAEGVAEELQPGLKEKVSQ 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL T +V EFPE+QG +G+EYA LQ + +AI EH P +P + I Sbjct: 388 AATLCKADLVTGMVGEFPEVQGIMGREYAFLQGIDPGVANAIAEHYLPTQAGGELPASDI 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 VS+ADKLDT+ +++ P+GS DPYALRRA LGII II+ + L+ + Sbjct: 448 GAFVSIADKLDTICGCFSVGLIPTGSADPYALRRAALGIINIIVAKGYALQLTTLVSKAL 507 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++ FF R + DR D+++A++ D+L+ I+ Sbjct: 508 ARLEGKLTRKKEEVFGDVMDFFQGRFVNLMTDR-FPADVVDAVVAVSFDDLVDTAAKIEA 566 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L F E ++ KR+ I+ L+ +AE L+ Sbjct: 567 LAVFKKRPDFEPLAVAFKRVCNIVKGPVVVVGVNELD-----FEEDAEGTLHRAYHSVAG 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + Y + ++ ++ FFD V+V +D VR+NRL+LLQ IK + + Sbjct: 622 TVAAKVAERDYLAALTQIATLKGAVDDFFDNVMVMAEDERVRNNRLALLQEIKGLFRDIA 681 Query: 697 NVQKI 701 + KI Sbjct: 682 DFAKI 686 >gi|114771721|ref|ZP_01449125.1| glycyl-tRNA synthetase beta subunit [alpha proteobacterium HTCC2255] gi|114547793|gb|EAU50683.1| glycyl-tRNA synthetase beta subunit [alpha proteobacterium HTCC2255] Length = 732 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 278/750 (37%), Positives = 410/750 (54%), Gaps = 76/750 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPA MQ+KA EDL+ ++ L E G+ Y + + TP RL L ++GL Sbjct: 8 MADLLLELFSEEIPAIMQNKACEDLNNVVTNALVEAGLTYNSSKSLSTPRRLCLMIEGLI 67 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GPRV A ++A++GFLR GL D +D KKG Y A++ K R Sbjct: 68 NKSPDTREERKGPRVDAPEQALNGFLRGVGLTI--DQLEVRDDKKGKTYFAIIEKEGRFA 125 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ A+ PWPKSMRW + + W+RPL SILCIL AED + + +++ Sbjct: 126 SEIVSEVINDAVNNFPWPKSMRWGS-----KSLKWVRPLHSILCILSAED-GVETVKVEI 179 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N+T GHRF +P V S++ Y +DL+++ V+LD R + IL DA LA A G Sbjct: 180 DGIKSSNLTAGHRFMSPDHFTVSSIEQYQKDLKKSYVILDAHERADHILEDAKNLAFAQG 239 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED +LL E+ GLVE+ V MG K++ LP E++ ++K +QK F R + Sbjct: 240 LELVEDINLLNEVAGLVEYPVVLMGEISKEFFELPAEVLMTSMKEHQKFFSVRNPKSNRI 299 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N SD G I+ GN +V+ ARL DA FW+ D Sbjct: 300 EKFITVANRATSDNGETIIAGNQKVLFARLSDAKFFWENDLRIA---------------- 343 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +++ +L+ V FH K+G+Q ER+ RI + ++L +AD+ L ++A +L K Sbjct: 344 -KAGMNEWSEKLN--KVTFHNKLGSQSERIKRISFIASATSRLTNADMELTNKAAMLCKV 400 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EF +LQG +G YA I +A +EH P+GP + VP+ +SI+V+LA Sbjct: 401 DLSSEMVGEFAKLQGLMGSYYAAEAGLPIEIGNASKEHYSPQGPTDAVPSAPVSISVALA 460 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-------------- 526 DK+DTL FW I+EKP+GSKDP+ALRRA LGIIR++++N+I+ PL Sbjct: 461 DKIDTLTGFWLIDEKPTGSKDPFALRRAALGIIRLVIDNEINEPLECILAYGFYLNSIAV 520 Query: 527 ------------QFIED---------------------QNLILFFHDRLKLYLHDRDIRH 553 + ++LI FFHDRLK+YL D++I H Sbjct: 521 QSLEDKSQTKYIDLSNNSLEQIFELIGEGHSKKTKGILRDLISFFHDRLKVYLRDQNINH 580 Query: 554 DLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EIS 611 D+I+A L P N N + K L EF S G+ L KR IL+ EEKK+ Sbjct: 581 DVIDACLAMPNNTNFSLLAKRAKVLQEFCDSDDGKNLLQGFKRANNILSAEEKKDGVSYE 640 Query: 612 LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVN 671 Y ++ E+ L+ ++ + + I + ++ + + L ++ PI++FF+ V +N Sbjct: 641 GTPEINYAQIDEERSLFKILDENESDIIDYINKQDFKSAMGALANLRLPIDLFFENVQIN 700 Query: 672 VDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D + VR NRL LL I+ I+ + I Sbjct: 701 SDSKIVRRNRLCLLNRIRLIMKSAADFTLI 730 >gi|332980880|ref|YP_004462321.1| glycyl-tRNA synthetase subunit beta [Mahella australiensis 50-1 BON] gi|332698558|gb|AEE95499.1| glycyl-tRNA synthetase, beta subunit [Mahella australiensis 50-1 BON] Length = 688 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 215/728 (29%), Positives = 356/728 (48%), Gaps = 67/728 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EEIPA + + + ++ + Y++MR Y TP R+ L K ++ Sbjct: 1 MNTFLLEIGCEEIPAHFMPDILDQMEQKGKAIFEQYRLPYKDMRAYGTPRRIVLIAKDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 H + + GP G KA+ GF+RS + I + A Sbjct: 61 RHQQDVEQLVKGPAKKAAYGDDGQPTKALLGFMRSQNVSVED--LIIDEINGIPYVYAHK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + LK I P I + +PKSMRW ++RP++ I +L + Sbjct: 119 VQRGMQASEALKGIAPQLISTLSFPKSMRWGDMD-----IRFVRPIRWIASLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I D+ IP G + GHRF + + D+YI +E+ V++D R++ I Sbjct: 169 EVISFDMGGIPSGRYSRGHRFLGQPEVAIDRADNYIAIMEQQFVIVDQHRRKDMISRQIK 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA G ++D DLLEE++ LVE+ F+G+FDKKYL LP+E++ +K +Q+ F + Sbjct: 229 ELADKTGGTALQDPDLLEEVVYLVEYPTAFLGNFDKKYLDLPKEVVITPMKDHQRYFPVK 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V N +D + +GN +V+ ARL+DA F++ D Sbjct: 289 DDTGALMPYFIGVRNG-TTDYIDVVREGNEKVLRARLDDAKFFFEED------------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV-- 411 + +PL+QR+ L +VFH +GT ++ R+R L + I Q + + ++ Sbjct: 335 -------IKRPLEQRVEELK--GIVFHDGLGTLYDKTMRLRNLCRYIGQRLGLNEDMLSC 385 Query: 412 -DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DRA LS+ADL T++V EF ELQG +G+EY++LQ E AI E PR ++++P Sbjct: 386 LDRAAYLSRADLVTDMVNEFDELQGIMGREYSILQGEPKPVAQAIYEMYLPRTAVDDLPD 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I +SLADKLDTL +++I +P+GS+DPY LRR LGI R+I E +I I L + Sbjct: 446 TVIGTAISLADKLDTLCGYFSIGLQPTGSQDPYGLRRQALGICRMIYEKEISISLRDAVM 505 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++ F R++ L D + +D+++A + + D++ + Sbjct: 506 HSLELYDLDDENRRKTFNEVLDFIKQRVRSMLIDDGLSYDVVDAAIAADFDDICEVRRRA 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K + ++ + + E F+ + R + A + SL + +E +L+ D Sbjct: 566 KIIAQWKARSDFEDFMTAFNRPNNLAAKTD------SLFVDESLFSDSSESKLWQAYKDA 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + E++ Y + ++L + ++ FFD VLV V+D +R NRL++L+ I + Sbjct: 620 KELLNEALAAWDYDRAYEILKGLKPAVDEFFDAVLVMVEDPAIRANRLAILKNIAELFKA 679 Query: 695 VINVQKIV 702 + + IV Sbjct: 680 IGDFSYIV 687 >gi|325123646|gb|ADY83169.1| glycyl-tRNA synthetase, beta chain [Acinetobacter calcoaceticus PHEA-2] Length = 689 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 355/724 (49%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKTLRDALQAETVKGLKDAGLNFVSIEAYAAPRRLALKIVD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP V G KA++GF+R G+ + K + Sbjct: 61 IDAAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K +L + Sbjct: 119 LKDVKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVLLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++I+D +++ GN+TYGHRFHAP + + + Y+ LE+A V+ D E R+ I Sbjct: 169 DDQIVDATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLTALEKAYVVADFEKRQATIKQQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 229 VKKLADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 LINAEGKLQPYFITVSNIESKD-PTQIIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A Sbjct: 338 ----------KQPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSPITGANPADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P Sbjct: 386 EKAALLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 446 KTGTTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNL 505 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F R + D+ + D+++A+ + L + Sbjct: 506 ALQGYGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVN 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + + + KR+ ILA E + L+ +AEK L+A + Sbjct: 566 AVNHFRTLTEAAALAAANKRVANILAKEAAPE----GSVVEANLVEDAEKALFAELQAVT 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V Sbjct: 622 PVVEPLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDVDLKANRLRLLAQLRNLFTAV 681 Query: 696 INVQ 699 +V Sbjct: 682 ADVS 685 >gi|153802495|ref|ZP_01957081.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae MZO-3] gi|124121965|gb|EAY40708.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae MZO-3] Length = 688 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 201/725 (27%), Positives = 335/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDSSKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|297581946|ref|ZP_06943866.1| glycyl-tRNA synthetase [Vibrio cholerae RC385] gi|297533813|gb|EFH72654.1| glycyl-tRNA synthetase [Vibrio cholerae RC385] Length = 693 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 201/730 (27%), Positives = 335/730 (45%), Gaps = 68/730 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TR-----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYSHKMGDANKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR----- 342 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 +PL R+ L+ + +F ++GT ++ RI L IA+ I A Sbjct: 343 ---------------KRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGA 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 DV RA +L+K DL T +V EF + QG +G YA E A+ E PR + Sbjct: 386 DVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+ +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L Sbjct: 446 ELPSRGVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLV 504 Query: 527 QFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 I Q +I F R + D D+I+A+L Sbjct: 505 DLIAKAKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 QRVKAVSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ Sbjct: 622 EIMAEALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNL 681 Query: 692 ILIVINVQKI 701 L + ++ + Sbjct: 682 FLQIADISLL 691 >gi|261213255|ref|ZP_05927537.1| glycyl-tRNA synthetase beta chain [Vibrio sp. RC341] gi|262402073|ref|ZP_06078637.1| glycyl-tRNA synthetase beta chain [Vibrio sp. RC586] gi|260837529|gb|EEX64232.1| glycyl-tRNA synthetase beta chain [Vibrio sp. RC341] gi|262351719|gb|EEZ00851.1| glycyl-tRNA synthetase beta chain [Vibrio sp. RC586] Length = 688 Score = 588 bits (1516), Expect = e-165, Method: Composition-based stats. Identities = 201/725 (27%), Positives = 336/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTIRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|167628096|ref|YP_001678596.1| glycine--tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167598097|gb|ABZ88095.1| Glycine--tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 695 Score = 588 bits (1516), Expect = e-165, Method: Composition-based stats. Identities = 216/725 (29%), Positives = 365/725 (50%), Gaps = 60/725 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + AE L + LK+ V + + + +P RL +K L+ Sbjct: 6 KDFLFELGTEELPPKALRSLAESLLNSVETQLKDAKVGFGGAKWFASPRRLSFIMKDLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + K GF S G++ +I+ KGD + Sbjct: 66 SQEDIVVEKQGPLVSIAYKDDEPTKVALGFASSCGVELDQLDRIE--TPKGDKLFYKTIQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L +L+ I+ A++++P PK MRW S ++RP+ +L + +E I Sbjct: 124 SGQLTVSLLQEIITKALKQLPIPKMMRWGD-----SVVEFVRPVHWVLALYGSE-----I 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + + Y R L EA VL+D E R+ ++ A ++ Sbjct: 174 VDIEILGHKASNITYGHRFHHPDAISINEIAEYERVLAEAKVLVDWEQRKQMLIEQAQKI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +++ D DL+EE+ +VE+ + SF+K +L +P+E + +++ +QKCF Sbjct: 234 AKENNYKVILDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISSMEEHQKCFALLDC 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 + L + FI +SNI++ + GN +V+ ARL DA F+ D Sbjct: 294 DNNLVSNFITISNIESK-KPELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L K L+Q + RL+ +V F K+G ++ RI +K+A L + D RA Sbjct: 338 -----LKKSLEQLLPRLE--NVTFQNKLGNMYQKAQRIANTAQKLADLNNVDSQQAYRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL +++V EF +LQG IGK YA E DAIE+ P+ +P ++ Sbjct: 391 LLAKADLISDMVFEFTDLQGIIGKYYAKAHGETDIVADAIEQQYWPKYSGAELPRTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ + I +KP+G+KDP+ALRR+ +GI+RI+ + IDI L + IE Sbjct: 451 CVALAEKLDTLVGIFGIGQKPTGNKDPFALRRSAIGILRILRDTNIDIALEKVIEIALDS 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ F DRLK D + ++ E+++ + D++ I + Sbjct: 511 YKEVNNLEFSSDIKAEVVSFCIDRLKNLYKDEGVAVNIFESVINTKYDSIKDFAARILAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS-PQYLLLEAEKRLYAVISDFGT 636 F S+ K + + S KR+ IL+ ++++ S I + E E L I + Sbjct: 571 TSFISTDKAQSLIASNKRVANILSKNASEDKKYSYNIEIAKTARNEYELALAYSIEEISA 630 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + ++ Y+ +LL + + I FF+ V+V DD VRDNR++LL I + + V Sbjct: 631 DLDKYLGNREYNYALELLTCLDKVIAEFFENVMVMDDDASVRDNRIALLATIHKMFVGVA 690 Query: 697 NVQKI 701 ++ K+ Sbjct: 691 DISKL 695 >gi|254225550|ref|ZP_04919159.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae V51] gi|125621870|gb|EAZ50195.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae V51] Length = 688 Score = 588 bits (1516), Expect = e-165, Method: Composition-based stats. Identities = 201/725 (27%), Positives = 335/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 ADSQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAIALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|322421192|ref|YP_004200415.1| glycyl-tRNA synthetase subunit beta [Geobacter sp. M18] gi|320127579|gb|ADW15139.1| glycyl-tRNA synthetase, beta subunit [Geobacter sp. M18] Length = 687 Score = 588 bits (1515), Expect = e-165, Method: Composition-based stats. Identities = 205/727 (28%), Positives = 341/727 (46%), Gaps = 68/727 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LEI EEIPA KA D+ +++ L+ + + + TP RL L +KGL Sbjct: 1 MAKDLFLEIGCEEIPAGFVPKAMADMELLMKRELETARIEFGEIVTLGTPRRLVLAVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ +GP G +A GF R G++ + KG+ AV Sbjct: 61 AARQPDAELTAMGPAKSAAYDADGNPTRAAQGFARGQGVEVADLKVVM--TPKGEYLAAV 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + R ++L ++P I +P+ KSMRW+ + RP+ I+ + Sbjct: 119 KSEVGRDTSELLPEMLPRLIGAIPFKKSMRWADFE-----VRFARPIHWIVALF-----D 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ I G+ + GHRF A V+ L HY+ + E V+ DPE R+ I + Sbjct: 169 GTVVPFSFGNIESGSASRGHRFMANTTFPVRDLAHYLEECERHFVIPDPEKRKAIIRQEI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R+A ++ D+ LLE++ LVE+ G+F +L +P E++ +++ +Q+ F Sbjct: 229 DRVARQAKANVLPDESLLEQVSFLVEYPSAVHGTFSPDFLVVPREVLITSMREHQRYFSL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI ++N D +V+GN RV+ ARL DA F+ D Sbjct: 289 VDDQGKLLPGFITINNTLTED-PQVVVKGNERVLRARLSDARFFFDEDH----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALV 411 L+ R+ L VV+ AK+GT E++ R R L K +AQ +A V Sbjct: 337 ---------KVKLETRVESLK--SVVYQAKLGTSYEKMERFRELAKGLAQRHNAAVTEKA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L KADL + +V EFPE+QG +G+EYA+ E+ + +AI EH P +P + Sbjct: 386 ARAATLCKADLVSGMVGEFPEVQGIMGREYALHDGEDAAVANAIAEHYLPTQAGGELPAS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 I VSLADK+DT+ +++ P+GS DPYALRR+ LGII IIL+ P+S ++ Sbjct: 446 DIGAFVSLADKMDTICGCFSVGLIPTGSADPYALRRSALGIINIILDKGYREPISGLVKA 505 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++++ FF R + DR D+++A++ D+L+ I Sbjct: 506 SLGLLEQKATRPVDEVQKDVLEFFRGRFVNLMADR-YPSDVVDAVVSVSFDDLVEAAAKI 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L EF ++ KR+ I+ + ++ + AE L+ + Sbjct: 565 RALAEFRKRDDFGALAVAFKRVCNIVK------EGVETPVAAELFQEPAEGGLFEAQNQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 +++++ Y + ++ +++FFD+V+V +D VR NRL+LL I + Sbjct: 619 KGKVEKALSGADYLCALTEIATLKPAVDLFFDKVMVMAEDERVRQNRLALLTSIARLFGR 678 Query: 695 VINVQKI 701 + + ++ Sbjct: 679 LADFARL 685 >gi|229520192|ref|ZP_04409619.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae TM 11079-80] gi|229342786|gb|EEO07777.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae TM 11079-80] Length = 693 Score = 588 bits (1515), Expect = e-165, Method: Composition-based stats. Identities = 201/730 (27%), Positives = 335/730 (45%), Gaps = 68/730 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 TESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVDMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TR-----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYSHKMGDANKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR----- 342 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 +PL R+ L+ + +F ++GT ++ RI L IA+ I A Sbjct: 343 ---------------KRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGA 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 DV RA +L+K DL T +V EF + QG +G YA E A+ E PR + Sbjct: 386 DVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+ +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L Sbjct: 446 ELPSRGVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLV 504 Query: 527 QFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 I Q +I F R + D D+I+A+L Sbjct: 505 DLIAKAKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 QRVKAVSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ Sbjct: 622 EIMAEALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNL 681 Query: 692 ILIVINVQKI 701 L + ++ + Sbjct: 682 FLQIADISLL 691 >gi|71066328|ref|YP_265055.1| glycyl-tRNA synthetase subunit beta [Psychrobacter arcticus 273-4] gi|71039313|gb|AAZ19621.1| glycyl-tRNA synthetase, beta subunit [Psychrobacter arcticus 273-4] Length = 697 Score = 588 bits (1515), Expect = e-165, Method: Composition-based stats. Identities = 202/733 (27%), Positives = 347/733 (47%), Gaps = 70/733 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ EE+P + + L I + + +++ + P RL + +KG+S Sbjct: 1 MSTILFELGCEELPPKSLKTLRDALQQSFIIQSAAANITFDSIKAFVAPRRLAIQIKGIS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++ EE+ GP + G +A GF + G++ I + KGD V Sbjct: 61 AKQPDRTEEKRGPAIKAAFDAEGNPTRAAMGFAKGLGIEASELTTI--NTDKGDYVGYVQ 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++L TI A+ +P K MR + + ++RP++ + + + Sbjct: 119 TVQGQATTELLPTIFQTALDNLPIAKRMRSGASRN-----EFVRPVQWAVLM-----QDD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I+ ++ GN T GHRFH+P + + Y + L+ V+ D + R+ I N Sbjct: 169 AVINATIQGHQTGNQTRGHRFHSPDYHTIAHANDYEQLLDGLKVVADFDKRQMLIKNQVK 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA V + + + LL+E+ LV++ SF+ ++L +P+E + T++ +QK F Sbjct: 229 ALADEVNSDAIVPQSLLDEVTALVDFPIALRASFEPRFLQVPQEALISTMQADQKYFCLT 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L FI ++NI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 DKEGKLQPYFIFITNIESKD-PKQIIEGNEKVVRPRLADAEFFFLQDQ------------ 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-----DADV 408 +PL L + VF K+GT E+ RI L IA L+ + D+ Sbjct: 336 --------KQPLFVLTENLK--NRVFQDKLGTIWEKSERIAKLAAFIATLMQQQGQEIDI 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +LSKADL + +V E+PELQG G YA L NE + ++EE P+ + + Sbjct: 386 NETVRAGILSKADLASSLVGEYPELQGIAGTYYARLNNEPEAVAASLEEQYLPKFSGDVL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + I ++LAD+LDTL+ +AI + P+GSKDP++LRR+ +GI+RI++E ++ I L Sbjct: 446 PKTAVGICLALADRLDTLVGIFAIGQAPTGSKDPFSLRRSAIGILRILIEKQLPINLVAL 505 Query: 529 IED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 +E ++ F + R + ++ + D I+A+ L Sbjct: 506 VEQAIKGYSTSDGSKIAKMGDTFTQVMAFLNSRYRAMYTEQGVSVDTIQAVQAINPHMPL 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ + F + S KR+ ILA K ++ E++ L E EK LY Sbjct: 566 DFDQRIRAVQTFSELPQASMLADSNKRVANILA---KSEGAVANEVNASLLTEEVEKSLY 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + +D Y Q+ L S+ P+ FF V+VN +D ++ NRL+LL+ + Sbjct: 623 QTVQQAQLDVMPLLDTANYTQVLQTLVSLDAPLTQFFADVMVNSEDAALKANRLALLKQV 682 Query: 689 KNIILIVINVQKI 701 + + L V ++ ++ Sbjct: 683 RALFLTVADISEL 695 >gi|92112142|ref|YP_572070.1| glycine--tRNA ligase [Chromohalobacter salexigens DSM 3043] gi|123265866|sp|Q1R1N7|SYGB_CHRSD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|91795232|gb|ABE57371.1| glycyl-tRNA synthetase beta chain [Chromohalobacter salexigens DSM 3043] Length = 688 Score = 588 bits (1515), Expect = e-165, Method: Composition-based stats. Identities = 211/720 (29%), Positives = 344/720 (47%), Gaps = 61/720 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+E+ +EE+P A L + L + V + + Y TP RL + ++GL Sbjct: 6 LLVELGAEELPPSAIEPLALALRDGIAKGLADADVAFASAHAYATPRRLAVRVEGLDDKQ 65 Query: 64 PEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P++ ER GP + G KA +GF RS G+ ++ D KG ++ Sbjct: 66 PDRDIERRGPALAAAFKDGQPTKAAEGFARSCGVTVDDLIHLETD--KGTWLGYRYQESG 123 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L IV A+Q +P PK+MRW + + + RP+ ++ + A+ ++ Sbjct: 124 EATTALLPAIVERAVQALPVPKNMRWGASRT-----EFSRPVHWLVMLYGAD-----VVP 173 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + G T GHRFHAP I + D Y+ LE A VL D + RR I A Sbjct: 174 ATVLGLEAGRTTRGHRFHAPDAIDLAHADDYLDALENAYVLADMQRRRERIREQVLAEAE 233 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V D+DLL+E+ GLVEW GSFD+++L +P E + ++K NQK F +G Sbjct: 234 VNEATAVIDEDLLDEVSGLVEWPVALTGSFDERFLDVPAECLISSMKANQKYFHLLDAQG 293 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D +++GN +V+ RL DA F+ D+ Sbjct: 294 TLKPLFITVSNIESRD-PQQVIEGNEKVIRPRLADAAFFYDTDR---------------- 336 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 + L R + L+ VVF +GT ++ RI + IA I D RA L Sbjct: 337 ----KQSLASRRSALE--SVVFQQSLGTLADKAQRIEAISSFIASRIGGDADHASRAAQL 390 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL TE+V EFPELQG +G YA E A+ E PR ++VP + + Sbjct: 391 AKCDLVTEMVLEFPELQGIMGTYYARQDGEPEEVAQALHEQYLPRFASDDVPATPAGLAL 450 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI---------------- 521 +LAD+LDTL + I ++PSG+KDP+ALRRA +G++ I+++ ++ Sbjct: 451 ALADRLDTLTGIFGIGQRPSGTKDPFALRRAAIGVLNILVKAELDLDLRELLELAAAQHG 510 Query: 522 DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 D+P ++ + +++ + DR + + D I ++ A+ L I+ ++ F Sbjct: 511 DLPKAEGL-VDDVLDYMLDRFRAWTQDEGIAVEVYLAVRARPVTRPLDFARRIRAVHAFS 569 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + KR+ IL+ K+ + S + L EAE L + ++ Sbjct: 570 QREEAVALAAANKRVSNILS---KQQHDGSTSVDTGLLQAEAETTLSTALEQCHQSVRPL 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D RY + D+L + P++ FF+ V+V +D VR NRL+LL ++++ L V ++ ++ Sbjct: 627 LDAARYAEALDVLAQLRGPVDAFFEDVMVMAEDEAVRRNRLALLASLQSLFLEVADIAQL 686 >gi|296284056|ref|ZP_06862054.1| glycyl-tRNA synthetase, beta subunit [Citromicrobium bathyomarinum JL354] Length = 734 Score = 587 bits (1514), Expect = e-165, Method: Composition-based stats. Identities = 253/758 (33%), Positives = 366/758 (48%), Gaps = 90/758 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ SEEIPARMQ A +L + + GV + + TP RL L +GL Sbjct: 6 DFLLEMRSEEIPARMQAGARAELEKLFRREMDAAGVSMGEVTVWSTPRRLALIARGLPTE 65 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + EE GP VGA +A+DGF R + D +D K + Y AV+ P R + D Sbjct: 66 TQAVSEEAKGPPVGAPDQAVDGFCRKNNVT--RDQLEVRDVKGRETYFAVIDTPGRAVRD 123 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 VL +P I+ WPKSMRW + W+RPL I+ +L +++++ ++ Sbjct: 124 VLAEAIPAIIRDFAWPKSMRWGAASISTESMRWVRPLSGIVALL-----GDEVVECEVHG 178 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 + G +T GHRFH I + D Y L A V++D + R I A R+AS GL Sbjct: 179 VTSGAVTLGHRFHHSGDITIGDADDYAVKLRAAHVIVDHQERAALIREGAARVASEAGLS 238 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 LVED+ L+ E GL EW +G F++ +L +P E I+LT + NQK FV +G LAN Sbjct: 239 LVEDEGLVVENAGLTEWPIPLLGRFEEDFLSVPPETIQLTARVNQKYFVCEDAQGTLANA 298 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 FI +NI+A+DGGAAIV GN +V+AARL DA FW+ DQ Sbjct: 299 FICTANIEAADGGAAIVDGNRKVLAARLSDARFFWEVDQ--------------------K 338 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK----------IAQLIDAD-VALV 411 K L Q L + FH K+GT ++V R+ L + A + + + Sbjct: 339 KTLAQHAEGLKR--ITFHEKLGTVADKVERVAKLARWLVESDIVTPASAGVTKEELAQMA 396 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 + A L KADL TE+V EFPELQG +G YA + + DAI +H KP G + VPT Sbjct: 397 EDAAKLCKADLVTEMVGEFPELQGLMGGYYAGAEGLPDAVADAIRDHYKPVGQGDEVPTA 456 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +++ VSLADKLDTL F+ I E P+GSKDP+ALRRA GI+ + +EN + + + Sbjct: 457 PVTVAVSLADKLDTLFAFFMIQEYPTGSKDPFALRRAANGILSLTVENGLRFGIWGWSTF 516 Query: 532 QN----------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L F DRLK+ + +RHDLI+A+ +++ + ++ + Sbjct: 517 LKENSNYPEAAGVHPRNLLHQFLQDRLKVQQREAGVRHDLIDAVRSDDDN--VRLLARVH 574 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEK---KNREISLEISPQYLL------------ 620 L F + G+ L KR IL E+ + + E P ++ Sbjct: 575 ALQSFMETEDGKNLLAGYKRAANILKKEDWQGVDDAPHTGEEDPLVMVDDPDMKDVVAAQ 634 Query: 621 -----------------LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 AEK L + G ++ +R+ L S+ PI+ Sbjct: 635 MAEKSAHPSGKSLSYTPEPAEKALMDALDTAGPQAATAVREERFADAMSALASLRAPIDD 694 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FF+ V VN +++ R RL LL ++ + V + KI Sbjct: 695 FFENVTVNDENKTKRSVRLGLLARFRDAVHQVADFGKI 732 >gi|262373565|ref|ZP_06066843.1| glycyl-tRNA synthetase beta subunit [Acinetobacter junii SH205] gi|262311318|gb|EEY92404.1| glycyl-tRNA synthetase beta subunit [Acinetobacter junii SH205] Length = 688 Score = 586 bits (1512), Expect = e-165, Method: Composition-based stats. Identities = 199/721 (27%), Positives = 353/721 (48%), Gaps = 62/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 L E+ EE+P + + L LK+ G+ + + Y P RL L + + Sbjct: 3 HTVLFELGCEELPPKSLKTLRDALKAETEKGLKDAGLNFAAIEAYAAPRRLALKIVDIDA 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + GP V G KA++GF+R G+ + K + + Sbjct: 63 AQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCFLKD 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + ++ Sbjct: 121 VKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----KDDQ 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I + + Sbjct: 171 VVEATIQDHKAGNVTYGHRFHAPEAVVLAHANDYLATLEQAYVVANFEKRQATIQDQVKK 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 231 LADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLIN 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI +SNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 291 AEGKLQPYFITISNIESKDPIQ-IIEGNEKVVRPRLSDAEFFFLQDQ------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R +L ++VF A++GT ++ RI L ++ + A++A ++A Sbjct: 337 -------KQPLASRKEKL--ANMVFQAQLGTLWDKSERIAKLAVALSPITGANIADAEKA 387 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL +E+V EFPELQG G YA L+ EN +A+ E P+ + +P Sbjct: 388 ALLAKCDLTSELVGEFPELQGIAGTYYARLEGENHEVAEALGEQYLPKFAGDVLPQTNTG 447 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 448 TTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNFALQ 507 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + + F R + D+ + D+I+A+ + L + +N Sbjct: 508 GYGDVVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVIQAVQALAPKSPLDFDKRVTAVN 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA E + L+ AEK LYA + + Sbjct: 568 HFRTLPEAAALAAANKRVANILAKEATPE----GAVVEANLVETAEKALYAELQALTPVV 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + + Y + L ++ PI+ FF+ V+V DD E++ NRL LL ++++ + +V Sbjct: 624 EPLLAARNYTEALSKLAALRAPIDAFFEGVMVMADDAELKANRLRLLAQLRDLFTAIADV 683 Query: 699 Q 699 Sbjct: 684 S 684 >gi|262280266|ref|ZP_06058050.1| glycyl-tRNA synthetase subunit beta [Acinetobacter calcoaceticus RUH2202] gi|262258044|gb|EEY76778.1| glycyl-tRNA synthetase subunit beta [Acinetobacter calcoaceticus RUH2202] Length = 689 Score = 586 bits (1512), Expect = e-165, Method: Composition-based stats. Identities = 203/724 (28%), Positives = 355/724 (49%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKNLRDALQAETVKGLKDAGLNFASIEAYAAPRRLALKIVD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP V G KA++GF+R G+ + K + Sbjct: 61 IDAAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K +L + Sbjct: 119 LKDVKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVLLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++I+D +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I Sbjct: 169 DDQIVDATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA V + DLL+E+ LVEW +F++++L +P+E + T++ NQK F Sbjct: 229 VKKLADEVNATAIVPADLLDEVTSLVEWPVALRANFEERFLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 LINSEGKLQPYFITVSNIESKDPIQ-IIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A Sbjct: 338 ----------KQPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSAITGANPADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P Sbjct: 386 EKAALLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 446 KTGTTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNL 505 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F R + D+ + D+++A+ + L + Sbjct: 506 ALQGYGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVN 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + + + KR+ ILA E + L+ +AEK L+A + Sbjct: 566 AVNHFRALPEAAALAAANKRVANILAKEAAPE----GSVVEANLVEDAEKALFAELQAVT 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ + Sbjct: 622 PVVEPLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAI 681 Query: 696 INVQ 699 +V Sbjct: 682 ADVS 685 >gi|119503578|ref|ZP_01625661.1| glycyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2080] gi|119460640|gb|EAW41732.1| glycyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2080] Length = 694 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 209/722 (28%), Positives = 337/722 (46%), Gaps = 60/722 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D L E+ +EE+PA AE L ++ L G+ Y + + + TP RL + + G+S Sbjct: 6 ADLLFELGTEELPAGPLATMAEALGSSILDGLTHHGLEYGSSKIFATPRRLAVLVAGVSL 65 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +P+K E LGP V G A GF + G+ I+ KGD Sbjct: 66 VAPDKTVEALGPPVTAARDKQGDWTPAALGFAKKQGVDVTDLTVIEAS--KGDRLGVRRT 123 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + VL I+ A+ +P K MRW ++RP++ +L +L + Sbjct: 124 ESGARAVAVLPEILANAVASIPVTKRMRWGRERH-----EFLRPIQWVLALL-----DTQ 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +ID+ + I T GHRFH I + S Y L A VL D + RR I + Sbjct: 174 VIDVVIMGITSDRQTLGHRFHHREAITLASPAKYEETLLAAYVLADFDLRRERIRSQVVA 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A + V D+ LL E+ GLVEW GSFD +L +P + ++K +QK F + Sbjct: 234 IADGLQANAVIDETLLNEVTGLVEWPVALQGSFDPAFLEVPAGAVISSMKEHQKYFHLVS 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI +SNI++ + A+++ GN RV+ RL DA F++ D+ Sbjct: 294 NEGDLLPLFITISNIES-NRPASVIAGNERVIRPRLSDAAFFFETDK------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + PL R +RL+ +VF K+G+ ++ RI L IA+ + AD+ + +A Sbjct: 340 -------ATPLADRGSRLE--GIVFQQKLGSVADKTRRIVALSSWIAEALGADIGVTQKA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+K DL T++V EFP+LQG G YA E+ S AIEEH PR + +P + + Sbjct: 391 ATLAKCDLVTDLVLEFPDLQGIAGAHYAHHDGESESVASAIEEHYWPRFSGDQLPNSAEA 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LAD+LDTL+ + I + P+GSKDP+ALRR L +IR+++ + L + Sbjct: 451 SAVALADRLDTLVGIFGIGQAPTGSKDPFALRRGALAVIRLLVNLDSPLTLLDLAQRAVR 510 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + +R + + D++I +++ A+L + + LN Sbjct: 511 EYPENLLDSDTAAAVTEYTLERFRSWYDDQNIAVEVLRAVLATGITGPAEVDRRVSALNV 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ IL+ K + P AEK+LY + + Sbjct: 571 FAGTEAAIALAAANKRVANILS---KSGETRAGTPMPNLFDQPAEKQLYETLEGLKAGVA 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +++ Y L ++ P++ FF++V+VN DD +RDNR LL ++N + + Sbjct: 628 KNISAGDYAAALSKLATLQAPVDSFFEEVMVNADDSAIRDNRHELLAALRNAFTGIADFA 687 Query: 700 KI 701 + Sbjct: 688 LL 689 >gi|296113853|ref|YP_003627791.1| glycyl-tRNA synthetase beta subunit [Moraxella catarrhalis RH4] gi|295921547|gb|ADG61898.1| glycyl-tRNA synthetase beta subunit [Moraxella catarrhalis RH4] Length = 692 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 212/728 (29%), Positives = 347/728 (47%), Gaps = 65/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V G +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ I+ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWIVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLNEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 341 ------------KQPLFELSHHLKTR--IFQDKLGTLWEKSERIANLAVHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G Y L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYTRLNDEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGIALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLHVSLSHLV 506 Query: 530 ED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQKI 701 V ++ + Sbjct: 683 SVADIGLL 690 >gi|50086259|ref|YP_047769.1| glycyl-tRNA synthetase subunit beta [Acinetobacter sp. ADP1] gi|81827366|sp|Q6F7L8|SYGB_ACIAD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|49532235|emb|CAG69947.1| glycyl-tRNA synthetase, beta chain [Acinetobacter sp. ADP1] Length = 689 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 202/724 (27%), Positives = 356/724 (49%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKTLRDALQAETVKGLKDAGLAFASIEAYAAPRRLALKIVD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP V G KA++GF+R G+ + K + Sbjct: 61 VDGAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITADQVSTFQ--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + Sbjct: 119 LKDVKGQTLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++II+ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I Sbjct: 169 DDQIIEATIQDHQAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA V + DLL+E+ LVEW +F++++L +P+E + T++ NQK F Sbjct: 229 VKKLADEVNATAIVPADLLDEVTSLVEWPVALRANFEERFLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 LINSEGKLQPYFITVSNIESKD-PTQIIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A Sbjct: 338 ----------KQPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSPITGANPADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P Sbjct: 386 EKAALLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 446 KTGTTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNL 505 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F R + D+ + D+++A+ + L + Sbjct: 506 ALQGYGDIVKDHDKTLADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVN 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + + + KR+ ILA E + L+ +AEK L+A + Sbjct: 566 AVNHFRALPEAAALAAANKRVANILAKEAAPE----GSVVEANLVEDAEKALFAELQAVT 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++++ +V Sbjct: 622 PAVEPLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRHLFTVV 681 Query: 696 INVQ 699 +V Sbjct: 682 ADVS 685 >gi|153826405|ref|ZP_01979072.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae MZO-2] gi|149739791|gb|EDM53986.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae MZO-2] Length = 688 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 202/725 (27%), Positives = 335/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 +V + Sbjct: 682 DVSLL 686 >gi|118602708|ref|YP_903923.1| glycine--tRNA ligase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|229558575|sp|A1AWZ5|SYGB_RUTMC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|118567647|gb|ABL02452.1| glycyl-tRNA synthetase beta chain [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 678 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 203/715 (28%), Positives = 354/715 (49%), Gaps = 57/715 (7%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFLLE+ EE+P + + + + L L + + Y ++ + TP RL + + L Sbjct: 4 KDFLLELGCEELPPKCLQQLSNAFTHNLTTELDKLKLSYSSVESFATPRRLAVLVSNLQL 63 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 ++I ER GP + A + I+GF +S G+ + ++K K Y ++ Sbjct: 64 QQNDQIIERKGPSISAFDQDIEGFAKSCGVA--KNVLVQKTFGKTQYYFFTKQQKGLKTI 121 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 D+L++ V +AIQ + K MRWS + ++RP ++ +L ++ ++ + Sbjct: 122 DLLESTVDIAIQNISIIKPMRWSNLDTY-----FVRPTHWLIMMLGSD-----VVPASIM 171 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + GN T G RF + Y LE A + +D R+ I ++A Sbjct: 172 GLASGNTTRGLRFTGERIFDITCAKDYQKILLERAQIEVDFNTRKEIIRKQVIQVAKNNN 231 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 V D+ LL+E+ LVE+ + F G+F K+L +PEE + +K++QK F +G L Sbjct: 232 AIAVIDESLLDEVCALVEYPRAFSGNFSSKFLDVPEEALISAMKSHQKYFHMLDVDGNLM 291 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+NI++S + I+ GN RV+ +RL D+ FW +D+ Sbjct: 292 PVFISVANIESS-NLSVIIDGNERVIRSRLADSEFFWTQDK------------------- 331 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + L+ R+ +L+ V+F +G+ G+++ RI + IA +I A+V RA +L K+ Sbjct: 332 -AHTLESRLDKLNQ--VLFMKSLGSMGDKIKRIEIFSGYIATVIGANVKDSARAGLLCKS 388 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T++V EF +LQG +G YA+ EN + AI EH PR +++P + V++A Sbjct: 389 DLVTDMVGEFADLQGVMGGYYALNDGENKAVASAISEHYHPRFSGDSLPNTSEGLAVAIA 448 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------------ 528 DKLDT+ I + P+GSKDPYALRR LG++RI++E+K+++ L + Sbjct: 449 DKLDTVTGIIGIGQGPTGSKDPYALRRMALGLLRIMIESKLNLNLKELISKSLNENSSAV 508 Query: 529 --IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 ++ F RL+ Y ++ + + EA+L ++ ++ LN F ++ Sbjct: 509 NINSVDDIYQFMMRRLRAYYKEQKVNIQVFEAVLAVCPESPYDFHLRVEALNTFTNNQAF 568 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 E + + KRI IL K + +++ L+ AEK L+ I ++ Sbjct: 569 ENLIETNKRIANIL----KNYSNLLIKVDDSALVEVAEKALFKATKSLSKRI---LNSTN 621 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + L + + I+ FFD+V+VN DD +R RL+L+ +++++ L V +V + Sbjct: 622 YTKNIQELIAFKDIIDEFFDKVMVNTDDVVLRQARLNLINWVRSLFLSVADVSHL 676 >gi|226311657|ref|YP_002771551.1| glycyl-tRNA synthetase beta chain [Brevibacillus brevis NBRC 100599] gi|226094605|dbj|BAH43047.1| glycyl-tRNA synthetase beta chain [Brevibacillus brevis NBRC 100599] Length = 689 Score = 586 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 195/733 (26%), Positives = 343/733 (46%), Gaps = 77/733 (10%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D L+E+ EE+PAR +AA + L E V + + TP R L + G Sbjct: 1 MSKRDLLVEVGLEEMPARFVAQAAAQFKEKVEKWLTAERVPFDQITALETPRRFALLING 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ +E GP G KA GF RS ++ D K+ + A Sbjct: 61 LAEKQPDRNDEAKGPARKIAQDEAGNWSKAALGFARSNNVEP--DQLYYKEVNGIEYVHA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++L + I + +PK+MRW ++RP++ ++ + Sbjct: 119 RKSEAGKPTTELLPQ-LAEVITGMSFPKNMRWGARE-----LKYVRPIRWLVALF----- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++IDL++ + G ++ GHRF + + Y+ L E V++ P+ RR I+ Sbjct: 168 GDELIDLEIAGVKSGRVSRGHRFLGTE-VTLNHPSEYVSKLAEQYVMVKPDERRATIVEQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 HRL G + D+ LL+E++ LVE+ G+F++++L +P E++ +++ +Q+ F Sbjct: 227 IHRLEKENGWTIPMDEGLLDEVVHLVEYPTALYGTFEQEFLSIPREVLVTSMREHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L N F+ V N + + +GN +V+ ARL DA F+ DQ Sbjct: 287 VENAQGQLLNHFVTVRNGDSR-ALENVAKGNEKVLRARLSDARFFYVEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 ++ + RL+ +V+H ++GT G++V R+R +IA + + Sbjct: 338 ------------SIESCLKRLET--IVYHEELGTIGDKVRRVRKTAAQIASKLGVSAEET 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 VDR ++K DL T +V EFPELQG +G++YA E+ + EH PR + + Sbjct: 384 KQVDRIAEIAKFDLVTNMVGEFPELQGIMGEDYARKAGESDVVASGVFEHYLPRFAGDKM 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + VSLADK+DT++ ++I P+GS+DPY LRR GI+ I++E I L+ Sbjct: 444 PASAQGAIVSLADKMDTIVGCFSIGIVPTGSQDPYGLRRMAAGIVTILVERDWQISLADL 503 Query: 529 IE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + ++L+ FF RLK L D +R+D+I+A+L + + Sbjct: 504 WDAAMEGYVAQGVNKRAAEDVKKDLVDFFALRLKNVLQDHGVRYDVIDAVLAADLTLVPE 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++ K L + + + + R+ + E + ++S + E+ LY Sbjct: 564 VLAKAKALMGAVQTEEFKLIVEQFNRVNNLAQKAE------ADQVSEALFAEDVERALYQ 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++ K ++ L ++ +PI FFD+V+V +D+ VR NRL LL + Sbjct: 618 AFQAVQKDVEGL---KDQEKVLATLSTLRQPINAFFDKVMVMAEDQAVRANRLGLLLQLS 674 Query: 690 NIILIVINVQKIV 702 ++ + KIV Sbjct: 675 RVLYRYADFSKIV 687 >gi|148244811|ref|YP_001219505.1| glycyl-tRNA synthetase beta subunit [Candidatus Vesicomyosocius okutanii HA] gi|229558586|sp|A5CW91|SYGB_VESOH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|146326638|dbj|BAF61781.1| glycyl-tRNA synthetase beta subunit [Candidatus Vesicomyosocius okutanii HA] Length = 677 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 216/715 (30%), Positives = 359/715 (50%), Gaps = 57/715 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ EE+P + + L+ L + + Y ++ + TP RL + + GL Sbjct: 5 DFLLELGCEELPPKNLQHLSNALTYNLTTEFDKLKLSYSSVESFATPRRLAVLVNGLQLQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + ER GP + KAI+GF +S G+ + +K K Y ++ D Sbjct: 65 QNNQTIERKGPLISELDKAIEGFAKSCGVA--RNMLTQKAFGKIQYYFFTKQQIGLKTID 122 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 +L+++V AIQ +P K MRWS + ++RP+ ++ +L ++ ++ + Sbjct: 123 LLESVVNTAIQNIPIAKPMRWSNLDTY-----FVRPVHWLIMMLGSD-----VVPASIMG 172 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 + NIT G RF + Y LE+A + +D + R+ I +A Sbjct: 173 LISSNITRGLRFTDECIFDIICAKDYQKTLLEKAQIEVDFDMRKAIIRKQIIHVAQNNNA 232 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 V D+ LL+E+ LVE+ VF G+F K+L +PEE++ +K+ QK F G L + Sbjct: 233 TAVIDESLLDEVCALVEYPCVFSGNFSSKFLDIPEEVLISVMKSYQKYFHMLDMNGNLMS 292 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 FI V+NI++SD + I+ GN RV+ +RL D+ FW +D+ Sbjct: 293 SFISVANIESSD-LSVIIDGNERVIRSRLSDSEFFWIQDKAY------------------ 333 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 L+ R+ RL+ V+F +G+ G++ RI +L IA +I A+V RA +L K+D Sbjct: 334 --TLEFRLDRLNQ--VLFMKSLGSMGDKAKRIEILSGYIAGVIGANVKDSSRAGLLCKSD 389 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EF +LQG +G YA EN + AI EH +PR +++P + VS+AD Sbjct: 390 LVTDMVGEFADLQGVMGGYYAFNDGENKAVSVAISEHYQPRFSGDSLPNTIEGLVVSIAD 449 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------------- 528 KLDT+ + I + P+GSKDPYALRR LG++RIILE+K I L + Sbjct: 450 KLDTITGIFGIGQGPTGSKDPYALRRMALGLLRIILESKFHINLKELISESLNAHLSVVN 509 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + ++ F +RL+ Y ++ + +A+L ++ I+ LN F ++ + E Sbjct: 510 TNKANDIYQFMMERLRSYYKKHEVSMQVFDAVLAVCPESPYDFHLRIRALNTFTNNQELE 569 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K ++S+++ L+ AEK L+ I S+ Y Sbjct: 570 NLIEINKRISNIL----KNCSDLSIKVDDSVLIETAEKTLFKATKILAKRISNSI---NY 622 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L ++ + I+ FFD+V+VN DD E+R RL+L+ +++++ L V ++ +V Sbjct: 623 TKNMKELIALKDMIDEFFDKVMVNTDDVELRQARLNLINWVRSLFLSVADISYLV 677 >gi|167621947|ref|YP_001672241.1| glycyl-tRNA synthetase subunit beta [Shewanella halifaxensis HAW-EB4] gi|189082274|sp|B0TLA9|SYGB_SHEHH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|167351969|gb|ABZ74582.1| glycyl-tRNA synthetase, beta subunit [Shewanella halifaxensis HAW-EB4] Length = 689 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 216/722 (29%), Positives = 352/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + + +P RL + + L+ Sbjct: 5 NLLIEVGTEELPPKSLRKLAESFLANFTEELTKAELSFDSAVWHASPRRLAICINQLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ ++K D KG+ L R Sbjct: 65 QADKVVEKRGPAIAQAFDADGNPTKAAQGWARGNGISVEQAERLKTD--KGEWLLHQARV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + ++ K+P PK MRW + + +IRP+ ++ +L +E + Sbjct: 123 VGVETKSLIADMAQRSLDKLPIPKPMRWGS-----NTTQFIRPVHTVTMLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 ++ +L I + GHRF ++ D+Y+ L+E VL D + R+ I DA Sbjct: 173 VEGELLGIKSDRVIRGHRFMGESSFELDHADNYLVALKEKGKVLADYQARKAIIKTDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGVADLEDDLLEEVTSLVEWPVVLTASFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F++ D+ Sbjct: 293 NAGQLLPNFIFVTNIESKD-PQQIISGNEKVVRPRLADAEFFFETDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ R+A L+ VVF ++GT +RV RI L IA I+A+ RA Sbjct: 339 -------KESLEARLASLET--VVFQKQLGTIKQRVERISALAGYIATSINANSEEAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A+ E KP+ + VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVAVALAEQYKPKFSGDTVPTAPIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 I V+LA+KLDTL+ + I + P G+ DP+ALRRA +G++RI LEN + + L I Sbjct: 450 ICVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRICLENNLPLDLVDLIAKAQE 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ FF R + + D+ + D+I A+L IK + Sbjct: 510 LHGENLTNENVAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARRPTAPADFESRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K E+ I + L+ EAEK L A +++ + Sbjct: 570 FRTLEQASALAAANKRVSNILA---KVEGELPAAIDDKLLVEEAEKALAAKLAELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ E ++ FF+ V+V DD +++NRL+LL ++ L ++ Sbjct: 627 PLFAAANYQEALALLASLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFLHAADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|239993757|ref|ZP_04714281.1| glycyl-tRNA synthetase subunit beta [Alteromonas macleodii ATCC 27126] Length = 692 Score = 585 bits (1507), Expect = e-164, Method: Composition-based stats. Identities = 198/701 (28%), Positives = 341/701 (48%), Gaps = 58/701 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + E + L + + + ++ + P RL +Y+ GL+ Sbjct: 5 NCLVELGTEELPPKALKSLGEAFATQFEAALTQADLSFDSVSWFAAPRRLAVYVSGLAEG 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 65 QADKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGIDVADAERLVTD--KGEWLLHKAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + + ++L+ ++ A+ K+P PK MRW ++ +IRP+ ++ + +E + Sbjct: 123 PGQSVAELLEGLINQAVSKLPIPKPMRWGNYNT-----QFIRPVHTLCVLYGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +++ + + G + GHRFH ++ D+Y LE+ VL D E R++ + Sbjct: 173 VNVSVLGLTSGRVVQGHRFHGEGRFELDHADNYASALEQQYVLADFEARKDKVRQQLEDA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++ L+ ++DLLEEI LVEW V FD+ +L +P+E + T+K +QK Sbjct: 233 AQSLSLKPDYNEDLLEEIASLVEWPVVLQAGFDEAFLAVPKEALIYTMKDDQKYVPLLDS 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L+N F+ V+NI++ D + GN +V+ RL DA F+ D+ Sbjct: 293 DGALSNTFLFVTNIESRDASQV-ISGNEKVIRPRLADAEFFFNSDK-------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L+ V+F ++GT E+ RI L IA IDA+ RA Sbjct: 338 ------KTTLESRLESLET--VLFQKQLGTLKEKSERISALSAFIASQIDANETQAARAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL + +V EFP++QG +GK YA+ E+ +A+ E PR + +P++ +S Sbjct: 390 LLAKTDLMSNMVMEFPDVQGVMGKYYALNDGEDAPVAEALYEQYMPRFAGDALPSSGVSA 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------- 528 +V+LADKLDTL+ + I + P G KDP+ALRRA +G++RI+ E + + L Sbjct: 450 SVALADKLDTLVGIFGIGQLPKGDKDPFALRRAAIGVLRIVTELSLPLDLETLVSKAIDV 509 Query: 529 --------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ F R L D+ I D+I+A+ + + +++F Sbjct: 510 YGDKLTNAETQAQVVDFVLGRFTALLQDQAIAIDVIQAVAARRPTKPADYLARVHAVDKF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + E + KR+ ILA + S+ I L EAEK LY + + Sbjct: 570 RALEEAEALAAANKRVANILAKQN-VEVTDSVNIDESLLAEEAEKALYVELKAAQKEVDI 628 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 ++ + Y +I L ++ I+ FFD V+V DD V++NR Sbjct: 629 AVPSQDYTRILTALATLRNVIDNFFDNVMVMADDEAVKNNR 669 >gi|307543598|ref|YP_003896077.1| glycyl-tRNA synthetase subunit beta [Halomonas elongata DSM 2581] gi|307215622|emb|CBV40892.1| glycyl-tRNA synthetase subunit beta [Halomonas elongata DSM 2581] Length = 690 Score = 584 bits (1506), Expect = e-164, Method: Composition-based stats. Identities = 217/725 (29%), Positives = 355/725 (48%), Gaps = 63/725 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M FLLE+ EE+P ++ L+ + L + V + ++ Y +P RL + + Sbjct: 3 MAADTFLLELGVEELPPSAIDTLSDALADGIRQGLDDANVEHGDIDAYASPRRLAVRVAA 62 Query: 59 LSPHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 L+ P++ ER GP + G KA +GF RS G+ S ++ D KG Sbjct: 63 LADKQPDREVERRGPSLAAAFKDGEPTKAAEGFARSCGVSVDSLIHLETD--KGTWLGYR 120 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++P +L IV AI +P PK+MRW S + RP ++ + Sbjct: 121 EQQPGEATTTLLPAIVEKAIAALPVPKNMRWGA-----SRVEFSRPAHWLVMLY-----G 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++++ + G T GHRFHAP PI++ D Y+ +E A VL D E RR I Sbjct: 171 ERVVEASALGLQAGRTTRGHRFHAPEPIELGHADDYLGAMENAWVLADREQRRERIREQV 230 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A V D++LL E+ GLVEW GSFD+++L +P E + ++K NQK F Sbjct: 231 LAEAEVQEATAVIDEELLIEVSGLVEWPVALTGSFDERFLEVPAECLVSSMKANQKYFHL 290 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI +SNI + ++QGN +V+ RL DA F+ D+ Sbjct: 291 LDDDGKLKPRFITISNIDS-QAPELVIQGNEKVIRPRLADAAFFYDTDRQ---------- 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 +PL +R+ L VVF ++GT ++ R + IA ID DV Sbjct: 340 ----------RPLVERVQELS--SVVFQQQLGTLADKAHRSAAVAAFIAGRIDGDVGHAR 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L+K DL TE+V+EFPELQG +G+ YA E+ A+EE PR + VP+ + Sbjct: 388 RASELAKCDLVTEMVQEFPELQGTMGRYYATHDGEDAEVARALEEQYLPRFAGDEVPSTR 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI----------- 521 + ++LAD+LDTL + I ++PSG+KDP+ALRRA++G++ I+++ ++ Sbjct: 448 TGLALALADRLDTLTGIFGIGQRPSGTKDPFALRRASIGVLNILIKGELDLDLRELLELA 507 Query: 522 -----DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++P ++ + ++ + DR + + D I ++ A+ L ++ Sbjct: 508 AAQHQELPYAEGL-VDEVLAYMLDRFRAWGRDEGIEAEVYLAVRARPVTKPLDFARRLQA 566 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F S + + KR+ ILA K++ EI+ E+ L +AE+ L ++ Sbjct: 567 VHAFASREEAAALAAANKRVSNILA---KQDDEIAPEVDTSLLAEDAERDLAEALAQCRE 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + RY D+L + P++ FFDQV+V +D V+ NRL+LL ++ + L V Sbjct: 624 KVAPLFAEARYSDALDVLAGLRNPVDRFFDQVMVMAEDAAVKRNRLALLASLQALFLEVA 683 Query: 697 NVQKI 701 ++ ++ Sbjct: 684 DIAEL 688 >gi|192359481|ref|YP_001980580.1| glycyl-tRNA synthetase subunit beta [Cellvibrio japonicus Ueda107] gi|190685646|gb|ACE83324.1| glycyl-tRNA synthetase, beta subunit [Cellvibrio japonicus Ueda107] Length = 692 Score = 584 bits (1506), Expect = e-164, Method: Composition-based stats. Identities = 195/724 (26%), Positives = 334/724 (46%), Gaps = 61/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ +EE+P + + + L + + +++ Y P RL L ++ L+ Sbjct: 3 ADFLVELGTEELPPKNLKNLMNAFAESIQADLTALELSFTSVKAYAAPRRLALLVENLAS 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 SP K GP G KA F G+ + + K + +A L Sbjct: 63 ESPSKELVVWGPPAAIAFDKEGQPTKAALAFAEKNGIAASALK--AESDGKVEKLVARLA 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + ++L+ +V A+ K+P K M+W + ++RP+ ++ + ++ Sbjct: 121 QDGQKTVELLEKVVGDALAKLPIAKRMKWGSKRE-----EFVRPVHWLVMLFGSD----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 ++ + + G T GHRFH PI++ + Y L+ V+ D R I + Sbjct: 171 VVSASVLGLTAGRTTRGHRFHYNQPIELANASDYASVLKNTGYVVADFAERSAIIKDQVE 230 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G V D LL+E+ LVEW G F++++L +P E + ++K +QK F Sbjct: 231 AEAKNIGGVAVIDPALLDEVTALVEWPVALTGQFEERFLAVPAEALIASMKEHQKYFHVV 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N FI V+N+Q+ D I+ GN RV+ RL DA F++ D+ Sbjct: 291 DANGKLKNYFITVANLQSKD-PTQIIDGNERVIRPRLSDAAFFFETDK------------ 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L RL +VF A++GT ++ R+ L + IA + AD A R Sbjct: 338 --------KTTLASLRERLKT--IVFQAQLGTIYQKTERVAKLAQFIAGKLKADEASAVR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L K+DL T +V EF ++QG G YA+ EN A+ E PR + +P Sbjct: 388 AAELCKSDLVTNMVGEFDDMQGIAGFYYALNDGENAEVAAAMNEQYMPRFAGDQLPATAT 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 ++LAD+LDT+ + I ++PSGSKDP+ALRRA++ ++R+++E + + L + + Sbjct: 448 GAIIALADRLDTISGIFGIGQQPSGSKDPFALRRASIAVLRLLVEKNLALDLRELLTFAK 507 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++ + DR + D I ++ +A+ + L I + +N Sbjct: 508 AQHNNLTVGEELVDQVLGYMLDRFRAMFEDAQIPAEVFQAVNAKQLSQPLDINQRVLAVN 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 EF + + + KR+ ILA K+N ++S ++P L EAEK L + + Sbjct: 568 EFSKLPQAQALAAANKRVSNILA---KQNADVSAAVNPALLQEEAEKNLAQAVGAKAAVV 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y Q L + ++ FFD V+V DD ++ NRL+LLQ ++ + L V ++ Sbjct: 625 APLFASREYTQALAALADLQPVVDAFFDNVMVMADDPALQQNRLALLQQLRGLFLEVADI 684 Query: 699 QKIV 702 +V Sbjct: 685 SYLV 688 >gi|317485411|ref|ZP_07944290.1| glycyl-tRNA synthetase beta subunit [Bilophila wadsworthia 3_1_6] gi|316923370|gb|EFV44577.1| glycyl-tRNA synthetase beta subunit [Bilophila wadsworthia 3_1_6] Length = 695 Score = 584 bits (1506), Expect = e-164, Method: Composition-based stats. Identities = 192/728 (26%), Positives = 331/728 (45%), Gaps = 62/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI +EE+P+R ++L+ LKE G + + TP R + ++GL Sbjct: 1 MSTFVLEIGTEELPSRFLSNVEKELADRFTAGLKEAGYTFSLLDTCATPRRSVVIVEGLE 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E +GP G KA GF ++ G+ + + +KG+ + Sbjct: 61 DTQPVREELVMGPPARIAFDAEGNPTKAAQGFAKTLGIDVSALG--RTQTEKGEYLSGMK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + DVL + P I +P+ K MRW F++ RP++ +L +L + Sbjct: 119 KTGGVPTLDVLAGLCPAIIAALPFAKRMRWGDGE-----FAFARPIRWVLALL-----GD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDA 232 ++ ++ ++ G +T GHR P P +++ Y+ + + V L RR I+++ Sbjct: 169 VVVPFEVGKVASGRVTQGHRVLGPGPFTIKTAGDYVPTIVKEGAVQLKAAERRAYIVSEG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +R+A AV +++ LL+E+ GLVE +G FD +L LP E++ +++ +QK F Sbjct: 229 NRIAEAVNGKIIWIDGLLDEVQGLVECPVPLLGDFDPSFLELPREVLLTSMQEHQKSFGV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L F+ V N+ D + + +G RV+ ARLED FWK D Sbjct: 289 EDASGNLMPHFLTVLNLHPKD-LSLVKKGWERVLRARLEDGRFFWKTD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L D+ + LD V F A +G+ GE+ RI L + +A+ + D Sbjct: 336 --------LEATFDEWLEALD--AVTFLAPLGSMGEKTRRISALCRWLAEKVQQDPEQAA 385 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSKADL + +V EF LQG +G YA + E + A+ E P GP VP + Sbjct: 386 RAGRLSKADLVSAMVGEFDTLQGIMGGIYARKKGETEAVAAALAEQYLPSGPDSPVPATE 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 + +S+ADK+DTL+ + + P+G+ DPYALRR LGI RI+LE + + E+ Sbjct: 446 LGSILSIADKVDTLVGCFGLGMIPTGAADPYALRRCALGITRIMLERGYRFDVKELFEEA 505 Query: 533 N------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 L FF R+K Y + L+EA+ + DN+ + + Sbjct: 506 QRLYGDRKWKLAPAEAIAKLNDFFIARVKNYFLTQGKETLLVEAVTAVDPDNVWALGRRL 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRLYAVISD 633 L + + KR+ I+ + + ++ + L AE L + Sbjct: 566 GALESMSRQDDFPQAAQTFKRVANIIRKQGHEAGVDLQGTWKRELLQEPAEMALAEALEK 625 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + + + + +L ++ ++ FD+V+V +D +R NRL++L+ + + Sbjct: 626 MFAAFEAAWANDDFEALFSMLAALRPAVDELFDKVMVMCEDPALRANRLNMLKALTLRME 685 Query: 694 IVINVQKI 701 + + + Sbjct: 686 RLADFSAL 693 >gi|296133896|ref|YP_003641143.1| glycyl-tRNA synthetase, beta subunit [Thermincola sp. JR] gi|296032474|gb|ADG83242.1| glycyl-tRNA synthetase, beta subunit [Thermincola potens JR] Length = 698 Score = 584 bits (1505), Expect = e-164, Method: Composition-based stats. Identities = 223/740 (30%), Positives = 354/740 (47%), Gaps = 81/740 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY----QNMRQYWTPHRLFLY 55 M DFLLEI +EEIPAR A L L+KE ++ Y TP RL + Sbjct: 1 MAKDFLLEIGTEEIPARFMDDALVQLGAKTGELIKEYRFKTPDEKGAVQVYGTPRRLVVS 60 Query: 56 LKGLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 + L E GP V G KA GF RS G+ + K+ G+ Sbjct: 61 ISNLGETQESAESEAKGPSVKAAYDEQGQPTKAALGFARSQGVAVED--LVVKNTGAGEY 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 AV R+ R + ++L I + +PK MRW+ ++RP++ IL + Sbjct: 119 VFAVKREEGRNVAELLPEFCLQLINGLSFPKPMRWADHE-----MRFVRPIRWILALY-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEA-MVLLDPECRRNA 227 E +I+ + G T GHRF ++ + Y R +E+ V++DPE R+ Sbjct: 172 ---GEDVINFQVAGTVSGRTTKGHRFLGKGEAEIANPADYFRRIEKELFVVIDPEERKRR 228 Query: 228 ILNDAHRLASAVGLELVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 I + L G ED D LL+E++ LVE+ GSF+ +L LP+E++ ++ Sbjct: 229 ITREVEALTKQAGGYFKEDDDFRELLDEVVHLVEYPVALTGSFEPDFLKLPKEVVVTPMR 288 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 +Q+ F +G L + FI +SN +D + +GN +V+ ARL DA F+ D Sbjct: 289 EHQRYFPVEKEDGQLLDKFIAISNGINND---LVREGNEKVLRARLADAKFFYDED---- 341 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 L PL + + +L +VF +GT ++V RI LG +A+ + Sbjct: 342 ----------------LKVPLAENVDKLK--KIVFQESLGTVYDKVERIIKLGTYLAEAL 383 Query: 405 DAD---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 D + RA L KADL + +V EFPELQG +GK+YA E + +AI EH P Sbjct: 384 QIDGAVQETIKRAGYLCKADLVSNMVYEFPELQGVMGKDYARHSGETDAVAEAIFEHYLP 443 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P K +S+ADK+DT++ +A+ +P+GS+DPYALRR LGI +I+ + + Sbjct: 444 RFAGDILPEAKAGQILSIADKMDTVVGCFAVGIQPTGSQDPYALRRQALGICHVIVNSGL 503 Query: 522 DIPLSQFIEDQ-------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 + LS ++ ++ FF R+K L ++ I +D+IEA+L Sbjct: 504 RVSLSAMVKRAYDNYEGKIEAKLNKEETVAEVLEFFRQRIKNILENKAISYDVIEAVLAS 563 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 D+L+ V+ + L + +K L + R+ + E ++ I P L E Sbjct: 564 GYDDLIDTVNRAEALTNLRNQEIFDKLLRAYNRVANLANKAETED------IEPALLKEE 617 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 AEK LY + + +Y Q+ + +PI+ +F+QV+V VDD +++NRL Sbjct: 618 AEKALYKEFLTASEEFRTYLKEGQYRQLFQRFALLQQPIDNYFEQVMVMVDDERIKNNRL 677 Query: 683 SLLQYIKNIILIVINVQKIV 702 +LL+ I N++L + ++ KIV Sbjct: 678 ALLKQITNLMLPIADLTKIV 697 >gi|329114987|ref|ZP_08243742.1| Glycyl-tRNA synthetase beta subunit [Acetobacter pomorum DM001] gi|326695430|gb|EGE47116.1| Glycyl-tRNA synthetase beta subunit [Acetobacter pomorum DM001] Length = 709 Score = 584 bits (1505), Expect = e-164, Method: Composition-based stats. Identities = 232/719 (32%), Positives = 367/719 (51%), Gaps = 53/719 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ +A E+L +L L + QN P R+ L + Sbjct: 24 MPELLIELFSEEIPARMQSQAGENLLRLLTEAL--APLHPQNAVAATGPRRIAASL-NID 80 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P + GPR GA KA+DGF R G+ + + ++ +P Sbjct: 81 ATVPGRTVSERGPREGAPDKALDGFTRKHGVTRDAL------TLQNGFWVLEREEPAVSA 134 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 + + ++P +++ PWPKSMRW S+F+W+RPL+ ILCIL E + + Sbjct: 135 QTHIAAVLPDLLRRFPWPKSMRWGAG----SSFTWVRPLRRILCILDGEAIPFSLAQGED 190 Query: 181 KEIP--CGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 N+T GHRF P + V S + + L + V++D RR I + LA++ Sbjct: 191 NGHNLVAANLTEGHRFLNPGAVAVSSATEWRKTLHDRHVMVDAAERRKTIAEGLNTLAAS 250 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 GL++V D L++E+ GLVEW F+G D +++ LP E+++++++ NQ+ F R +G Sbjct: 251 EGLQIVPDSGLVDEVAGLVEWPVPFLGQIDAQFMELPAEVMQVSMRVNQRYFALRNSDGS 310 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 A F V+NI +D G IV GN RV+ AR DA HFW D+ Sbjct: 311 AAPRFAFVANIIPADDGTLIVTGNERVLRARFADARHFWDLDR----------------- 353 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + L R+ LD + FHA +G+QG+R R+ L +A ++ A A +RA LS Sbjct: 354 ---KQTLASRLKALD--SITFHASLGSQGDRTRRMVRLAGILADMVGAPKADCERAAELS 408 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EFPELQG +G YA E+ + AI E PRGP ++VPT +S+ + Sbjct: 409 KTDLTTGMVGEFPELQGVMGGYYAKHDGESAAVAQAISEQYTPRGPGDSVPTAPVSVVLG 468 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------------S 526 LAD++D L+ F+A EKPSGS DP+ LRRA LG+IR+I EN + + L + Sbjct: 469 LADRIDMLVAFFAAGEKPSGSGDPFGLRRAALGVIRLIRENNLRLDLVRLFVLAAEALPA 528 Query: 527 QFIEDQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLNEFFS 582 + +L F +RL++ + RHD + AI +D +++ ++ L + Sbjct: 529 DLQDAPDLDLLPQFIAERLRVQVRSEGARHDCLAAISVDNSDTDIVRLLARAHALQDMLE 588 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + G+ L + +R IL IE+KK+ P + E+ L+ + +++ Sbjct: 589 TEDGKNLLAATRRAANILRIEDKKDGPHEDSPDPALFTQDEERALFDALERVEPAVEKDF 648 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +R+ S+ EP++ FF+ V VN + E+R NRL LL + ++ ++ + +I Sbjct: 649 AAERFTDAMREAASLREPLDKFFEVVTVNAPEPELRLNRLKLLSRVVRMMRLIADFSQI 707 >gi|229524922|ref|ZP_04414327.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae bv. albensis VL426] gi|229338503|gb|EEO03520.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae bv. albensis VL426] Length = 688 Score = 584 bits (1505), Expect = e-164, Method: Composition-based stats. Identities = 200/725 (27%), Positives = 336/725 (46%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVASL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTLESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKE-PRHIVEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +I F R + D D+I+++L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQSVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|145301092|ref|YP_001143933.1| glycyl-tRNA synthetase subunit beta [Aeromonas salmonicida subsp. salmonicida A449] gi|166227910|sp|A4STG3|SYGB_AERS4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|142853864|gb|ABO92185.1| glycine-tRNA synthetase, beta subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 689 Score = 584 bits (1505), Expect = e-164, Method: Composition-based stats. Identities = 211/723 (29%), Positives = 338/723 (46%), Gaps = 61/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI + E+P + AE + L + + + ++ + +P RL L + L+ Sbjct: 4 HTFLVEIGTAELPPKALRSLAEAFADNFKAELTKADLAFGDIEWFASPRRLALKVHALAS 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P K E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 64 EQPSKSVEKRGPAVSQAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHTAK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +D+L +V A+ K+P PK MRW ++RP+ ++ +L E Sbjct: 122 VEGRPAKDLLGELVASALAKLPIPKMMRWGD-----KTIQFVRPVFTVTLLLDGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAH 233 ++ + I GHRF + + Y + LE+ V+ D R+ I DA Sbjct: 172 LVPAHILGIDSARTIRGHRFMGEPEFTIDNASQYPQILLEKGKVVADFMARKAKIKADAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A G D LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 232 AAAAAFGGVADLDDALLEEVTALVEWPVVLTANFEEKFLAVPAEALVHTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI V+NI++ D + I+ GN +VV RL DA F+K D Sbjct: 292 DKNGKLLPKFIFVTNIESKD-PSQIISGNEKVVRPRLSDAEFFFKTD------------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L + L R+ RL+ V+F ++GT +V RI + IA+ I A+VA R Sbjct: 338 -------LKQTLASRLPRLET--VLFQQQLGTVKAKVERIETVAGFIAERIGANVAQAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF QG +G YA E+ A+ E PR + +P+ Sbjct: 389 AGLLSKCDLMTNMVGEFASTQGVMGMHYARHDGEDEVVAVALNEQYMPRFAGDALPSALE 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + V+LADKLDTL + I P G KDP+ALRRA +G +RI+ E ++D+ L + +E+ Sbjct: 449 ACAVALADKLDTLAGIFGIGMLPKGDKDPFALRRAAIGALRIMTEKQLDLDLVELVEEAV 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F R + D I D++ A+L L +K ++ Sbjct: 509 RVYGDKLTNKTVVTDVVDFMLGRFRAAYQDEGIGADVVLAVLARRPTRPLDFDRRVKAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F S + KR+ ILA K E+ + P+ L AEK L +++ + Sbjct: 569 HFRSLDAALALAAANKRVSNILA---KVEGELPTAVKPELLQDAAEKALATQVAELQAEL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y L ++ EP++ FF++V+V DD ++ NRL+LL ++N+ L V ++ Sbjct: 626 APLFAAGDYQAALTRLAALREPVDTFFNEVMVMADDEALKANRLALLNNLRNLFLQVADI 685 Query: 699 QKI 701 + Sbjct: 686 SLL 688 >gi|218777903|ref|YP_002429221.1| glycyl-tRNA synthetase, beta subunit [Desulfatibacillum alkenivorans AK-01] gi|259511920|sp|B8FKD8|SYGB_DESAA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218759287|gb|ACL01753.1| Glycyl-tRNA synthetase, beta subunit [Desulfatibacillum alkenivorans AK-01] Length = 690 Score = 584 bits (1505), Expect = e-164, Method: Composition-based stats. Identities = 196/727 (26%), Positives = 334/727 (45%), Gaps = 65/727 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLEI SEEIPA A E L+ L L+ + + + Y TP RL + L ++ Sbjct: 1 MQPLLLEIGSEEIPAGYIVPALEALAQALDAKLESARIAHSKPKVYGTPRRLAVILDEVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 E +GP G K F G+ ++ +KG A + Sbjct: 61 EKQESVTTEMVGPPKSVAFDGEGKPKVPAVKFAEKAGVAVEE--LTFQETEKGVYLCAKI 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +L+ ++P I +P+PKSMRW+ ++ RP+ SIL +L + Sbjct: 119 QDEGKETLGILQEMLPEIISHIPFPKSMRWAAL-----PGTFARPVFSILALL-----GD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I + + G T GH F AP I +Q+ Y+ LE+A V+ D RR + Sbjct: 169 QVIPFEWNGVTTGRQTRGHYFMAPEAIDIQTPSEYVNALEKAKVIADIPTRRKMVKEGVD 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A +G + +ED++L++ + LVE+ G F+ +L +P++++ ++ +QK F + Sbjct: 229 AIAKELGGDAIEDEELVDIVANLVEFPAPVGGKFETGFLEVPDKVLITAMREHQKYFAIQ 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L CF+ V+N Q D + G+ RV+ ARL DA FW D+ Sbjct: 289 DKDGKLMPCFVAVNNTQCKD-PQLVATGHERVLRARLSDAKFFWDVDK------------ 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA--QLIDADVALV 411 + ++ + RLD V+F K+G+ GE+V+R+ + K +A I+ D Sbjct: 336 --------KQSMEDWVKRLDR--VLFQKKLGSVGEKVARVEEMAKFLAAAPEINGDPDKA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +A KADL + +V EF +LQG +GK YA L + A+EEH P +P Sbjct: 386 QKAAHFCKADLVSGLVIEFTKLQGVMGKAYASLAGMDAETASALEEHYLPAYSGGPLPRT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 K V++ADK+D+L +A+ PSG++DPYALRR +G+IRI+ E + LS ++ Sbjct: 446 KTGDAVAMADKMDSLCGCFAVGLIPSGNRDPYALRRQGIGVIRILQEKGYSLSLSAIVDK 505 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +I F DR+ L ++ D+I+A + D++ + + Sbjct: 506 GLTLVKDKADQNLAETRDKIISFLADRMAHMLAEQGFSKDVIQAAVAISCDDIPYLWKRV 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + + + E + KR+ I+ +K E++P + EK L + Sbjct: 566 AAVEKLKTLPDYEALAQTFKRVANIIKQAAEKGTLSDQEVNPALFEKDCEKDLLEAFTAM 625 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + + + ++ FFD V+V +D +VR+NRL+LL I + Sbjct: 626 EAKVSGLGVDE----ALLEVAKLRPAVDAFFDDVMVMAEDMKVRENRLALLAGIAGLFGR 681 Query: 695 VINVQKI 701 + +I Sbjct: 682 FADFSRI 688 >gi|210623879|ref|ZP_03294114.1| hypothetical protein CLOHIR_02065 [Clostridium hiranonis DSM 13275] gi|210153305|gb|EEA84311.1| hypothetical protein CLOHIR_02065 [Clostridium hiranonis DSM 13275] Length = 689 Score = 583 bits (1504), Expect = e-164, Method: Composition-based stats. Identities = 220/727 (30%), Positives = 359/727 (49%), Gaps = 67/727 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L E+ EE+P+R + + +L E+ V ++N+ + TP RL + GL Sbjct: 1 MNNYLLFEVGVEEMPSRFVASTLKQIKESTEKMLNEKRVKFENIETFATPRRLTFIINGL 60 Query: 60 SPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G K GF+RS GL K+ K + A Sbjct: 61 AERQEDLEEEVKGPSKKISLDADGNFTKPAQGFMRSKGLNPED--IYFKEVGKDEYLFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +R+ +VLK I+P+A++ V +PK+M W+ ++RP++ ++ +L Sbjct: 119 IRENGAETAEVLKEILPLAVKSVVFPKAMHWAGKD-----IRFVRPIRWLVALL-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ +DL+ I N+T GHRF I V S++ Y L E V+LD R+ I+ A Sbjct: 169 DEVLPVDLEGIIASNVTKGHRFLGAKEIVVNSVEDYKAKLRENYVILDQAERKAMIVEQA 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +++A ++G +++ D DLL+E+ +VE+ F G FDK+YL LP+ ++ ++ +Q+ F Sbjct: 229 NKVAESLGGKVIMDPDLLDEVTCIVEYPTAFYGEFDKEYLKLPKRVVITPMQDHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI V N + G + GN +V+ ARL DAL F++ D Sbjct: 289 EDADGNLLPNFIAVRNGDS-FGIENVKAGNEKVLEARLADALFFYREDT----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVAL 410 K L+ RL VVF K+GT ++ RI L IA + A Sbjct: 337 ---------KKNLESYKERLKT--VVFQEKLGTIYDKSERITKLSAVIADSLGCADKKAD 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA L KADL T +V EF ELQG +G EY+ L+ EN + AI EH P VP Sbjct: 386 IVRAAELCKADLVTNMVFEFDELQGYMGMEYSKLEGENPAVSQAIYEHYMPVSAGAEVPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + VS+ADKLD++ F+AI +P+GS+DP+ALRR LGI+ I++ENKI I + + E Sbjct: 446 SLEGSVVSIADKLDSIAGFFAIGIQPTGSQDPFALRRQALGILNILMENKITIDIKEISE 505 Query: 531 DQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++ F +R+K D IR+D++EAIL + +++ + Sbjct: 506 AALDNYTELEFNKEEVVGQMLDFCSERIKNLFKDMGIRYDVVEAILNADINDIADMHHRA 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 LNE+ + + + L + R+ + E N + L+ EK LY Sbjct: 566 LELNEWINKDELVEMLTAFNRVSTLAEKAEGVN------VDEALLVEAPEKELYESFKSV 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ + +K Y + D ++ ++ FD V+V D VR+NRL++L+ I + +L Sbjct: 620 KEEVKGHLANKDYGKALDSFATLKPAVDNMFDNVMVMDKDDNVRNNRLNMLKNISDTMLT 679 Query: 695 VINVQKI 701 + ++ KI Sbjct: 680 ICDLNKI 686 >gi|332139416|ref|YP_004425154.1| glycyl-tRNA synthetase subunit beta [Alteromonas macleodii str. 'Deep ecotype'] gi|238693287|sp|B4S277|SYGB_ALTMD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|327549438|gb|AEA96156.1| glycyl-tRNA synthetase subunit beta [Alteromonas macleodii str. 'Deep ecotype'] Length = 692 Score = 583 bits (1504), Expect = e-164, Method: Composition-based stats. Identities = 197/701 (28%), Positives = 340/701 (48%), Gaps = 58/701 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + E + L + + + ++ + P RL +Y+ GL+ Sbjct: 5 NCLVELGTEELPPKALKSLGEAFATQFEAALSQADLSFDSVSWFAAPRRLAVYVSGLAEG 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 65 QADKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGIDVADAERLVTD--KGEWLLHKAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + + ++L+ ++ A+ K+P PK MRW ++ +IRP+ ++ + +E + Sbjct: 123 PGQSVAELLEGLINQAVSKLPIPKPMRWGNYNT-----QFIRPVHTLCVLYGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +++ + + G + GHRFH ++ D+Y LE+ VL D E R++ + Sbjct: 173 VNVSVLGLTSGRVVQGHRFHGEGRFELDHADNYASALEQQYVLADFEARKDKVRQQLEDA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + L+ D++LLEEI LVEW V FDK +L +P+E + T+K +QK Sbjct: 233 AKNLSLKPDYDEELLEEIASLVEWPVVLQAGFDKGFLEVPKEALIYTMKDDQKYVPLLDS 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L+N F+ V+NI++ D + GN +V+ RL DA F+ D+ Sbjct: 293 DGALSNTFLFVTNIESHDASQV-ISGNEKVIRPRLADAEFFFNSDK-------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L+ V+F ++GT E+ RI L IA IDA+ RA Sbjct: 338 ------KTTLESRLESLET--VLFQKQLGTLKEKSERISALSAFIASQIDANETQAARAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL + +V EFP++QG +GK YA+ E+ +A+ E PR + +P++ +S Sbjct: 390 LLAKTDLMSNMVMEFPDVQGVMGKYYALNDGEDAPVAEALYEQYMPRFAGDALPSSGVSA 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------- 528 +V+LADKLDTL+ + I + P G KDP+ALRRA +G++RI+ E + + L Sbjct: 450 SVALADKLDTLVGIFGIGQLPKGDKDPFALRRAAIGVLRIVTELSLPLDLETLVSKAIDV 509 Query: 529 --------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ F R L D+ I D+I+A+ + + +++F Sbjct: 510 YGNKLTNAETQTQVVDFVLGRFNALLQDQAIAIDVIQAVAARRPTKPSDYLARVHAVDKF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + E + KR+ ILA + ++ I L +AEK LY + ++ Sbjct: 570 KALEEAEALAAANKRVANILAKQN-VEVTATVNIDESLLAEDAEKALYVELKAAQKEVEI 628 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 ++ + Y +I L ++ I+ FFD V+V DD V+ NR Sbjct: 629 AVPSQDYTRILTTLATLRNVIDNFFDNVMVMADDEAVKHNR 669 >gi|161830292|ref|YP_001597730.1| glycyl-tRNA synthetase subunit beta [Coxiella burnetii RSA 331] gi|189082266|sp|A9NB99|SYGB_COXBR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|161762159|gb|ABX77801.1| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii RSA 331] Length = 689 Score = 583 bits (1504), Expect = e-164, Method: Composition-based stats. Identities = 222/722 (30%), Positives = 363/722 (50%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 5 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 65 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 123 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR + D + Sbjct: 173 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRRE-KIRDLIQ 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A++ E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 232 KAASEKGEAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIKN 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ ++ GN RV+ ARL DA F+ D Sbjct: 292 KNGDLLPYFIIVSNIESK-NPKRVIVGNERVINARLADASFFYDND-------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L RA Sbjct: 337 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N +S Sbjct: 389 GLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 449 PCVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L D+ L IK + Sbjct: 509 NYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPDDPLDFDRRIKAVQH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 569 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 627 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|315178617|gb|ADT85531.1| glycyl-tRNA synthetase, beta chain [Vibrio furnissii NCTC 11218] Length = 688 Score = 583 bits (1504), Expect = e-164, Method: Composition-based stats. Identities = 203/703 (28%), Positives = 326/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L G+ + + Y TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFTAELNNAGIAHDGVTWYATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEGQPDKVVEKRGPAVSVAFDADGNPTKAAQGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + Sbjct: 119 EQVKGQDTAAVVVDMAAKALAHLPIAKPMRWGDKET-----QFIRPVKTLTILF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILND 231 + +ID ++ + I GHRF + S Y LE V+ D E R+ I++ Sbjct: 169 DTLIDGEILGVKSDRIIRGHRFMGEPEFTIDSAAQYPAILLERGKVIADYETRKAMIIDG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+ +G + DL+EE+ LVE+ V F++K+L +P E + T+K +QK F Sbjct: 229 AQKAAAELGGIADLEDDLVEEVTSLVEFPVVLTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + L FI VSNI++ + +++GN +VV RL DA F+ D Sbjct: 289 VYDADKHLLPNFIFVSNIESKE-PRHVIEGNEKVVRPRLADAEFFFNTD----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L L R+ +L+ +F K+GT ++ RI L IA+ I ADV Sbjct: 337 ---------LKSKLVDRLPQLETA--IFQQKLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR +++PTN Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDSLPTN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLSNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARHPTKPADFDRRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRDLDAAEALAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKALAEAVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y Q L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQQALSQLAGLREPVDAFFDNVMVMADDEALKK 664 >gi|260771056|ref|ZP_05879984.1| glycyl-tRNA synthetase beta chain [Vibrio furnissii CIP 102972] gi|260613945|gb|EEX39136.1| glycyl-tRNA synthetase beta chain [Vibrio furnissii CIP 102972] Length = 688 Score = 583 bits (1504), Expect = e-164, Method: Composition-based stats. Identities = 204/703 (29%), Positives = 326/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L G+ + + Y TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFTAELNNAGIAHDGVTWYATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEGQPDKVVEKRGPAVSVAFDADGNPTKAAQGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + Sbjct: 119 EQVKGQDTAAVVVDMAAKALAHLPIAKPMRWGDKET-----QFIRPVKTLTILF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILND 231 + +ID ++ + G I GHRF + S Y LE V+ D E R+ I++ Sbjct: 169 DTLIDGEILGVKSGRIIRGHRFMGEPEFTIDSAAQYPAILLERGKVIADYETRKAMIIDG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+ +G + DL+EE+ LVE+ V F++K+L +P E + T+K +QK F Sbjct: 229 AQKAAAELGGIADLEDDLVEEVTSLVEFPVVLTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D Sbjct: 289 VYDANKHLLPNFIFVSNIESKE-PRHVIEGNEKVVRPRLADAEFFFNTD----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L L R+ +L+ +F K+GT ++ RI L IA+ I ADV Sbjct: 337 ---------LKSKLVDRLPQLETA--IFQQKLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR +++PTN Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDSLPTN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLSNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARHPTKPADFDRRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRDLDAAEALAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKALAEAVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y Q L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQQALSQLAGLREPVDAFFDNVMVMADDEALKK 664 >gi|30581049|sp|P45651|SYGB_COXBU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS Length = 689 Score = 583 bits (1504), Expect = e-164, Method: Composition-based stats. Identities = 222/722 (30%), Positives = 363/722 (50%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 5 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 65 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 123 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR + D + Sbjct: 173 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRRE-KIRDLIQ 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A++ E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 232 KAASEKGEAIIDEGLLEEVTGMVEWPVILVGNFKAEFLKLPPEVLITTMKVHQRTFPIKN 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ ++ GN RV+ ARL DA F+ D Sbjct: 292 KNGDLLPYFIIVSNIESK-NPKRVIVGNERVINARLADASFFYDND-------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L RA Sbjct: 337 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N +S Sbjct: 389 GLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 449 PCVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L D+ L IK + Sbjct: 509 NYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPDDPLDFDRRIKAVQH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 569 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 627 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|37222167|gb|AAP70370.1| GlyS [uncultured bacterium] Length = 692 Score = 583 bits (1503), Expect = e-164, Method: Composition-based stats. Identities = 195/724 (26%), Positives = 335/724 (46%), Gaps = 61/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ +EE+P + + + LK + + ++ + P RL + ++ L+ Sbjct: 3 ADFLVELGTEELPPKALKNLMTSFAETIEANLKAAELSFTAIKPFAAPRRLAVLVENLAS 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +P K GP G KA F G+ + K + +A + Sbjct: 63 ETPAKELVVWGPPAAIAFDKEGQPTKAALAFAEKNGIAASELK--AESDGKAEKLVARIT 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + D+L+ +V A+ K+P K M+W ++RP+ ++ + ++ Sbjct: 121 TEGKKTVDLLEAVVTDALAKLPIAKRMKWGAKRE-----EFVRPVHWLVMLFGSD----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ + + G T GHRFH + I + Y L+ V+ D R I Sbjct: 171 VINASVLGLTAGRTTRGHRFHYNNTIDLAKAGDYASVLKNTGFVVADFTERGATIKQQVE 230 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A VG V D +LL+E+ LVEW G F++++L +P E + ++K +QK F Sbjct: 231 AEAKKVGGVAVIDANLLDEVTSLVEWPVALTGKFEERFLAVPSEALIASMKEHQKYFHVV 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N FI V+NIQ+ D + I+ GN RV+ RL DA F++ D+ Sbjct: 291 DTNGKLKNNFITVANIQSKD-PSQIIDGNERVIRPRLSDAAFFFETDK------------ 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L RL +VF A++GT ++ R+ L K IA ++AD A +R Sbjct: 338 --------KTTLASLRERLKT--IVFQAQLGTIYDKTERVAGLAKLIAGKLNADAASAER 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L K+DL T +V EF ++QG G YAV EN A+ E PR + +P Sbjct: 388 AAQLCKSDLVTNMVGEFDDMQGIAGYYYAVNDGENAEVAAAMNEQYMPRFAGDQLPATTT 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 ++LAD+LDT+ + I ++P+GSKDP+ALRRA++ ++RI++E + + L + Sbjct: 448 GAIIALADRLDTISGIFGIGQQPTGSKDPFALRRASIAVLRILVEKNLALDLRDLLTFAK 507 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + ++ + +R + + D +I ++ +++ + L I + +N Sbjct: 508 NQHKNLTVGDELVEQVLAYMLERFRAFFEDANIPAEVFQSVTAKQLSQPLDINQRVLAVN 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 EF + + KR+ ILA K+N S E++ L +AEK L +S + Sbjct: 568 EFSKLPQALALAAANKRVSNILA---KQNAAPSTEVNAALLQEDAEKILAQAVSAKAAVV 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y + L + +P++ FFD V+V DD ++ NRL+LLQ ++ + L V ++ Sbjct: 625 APLFAAREYTKALAALADLQQPVDAFFDSVMVMSDDPALQQNRLALLQQLRGLFLEVADI 684 Query: 699 QKIV 702 +V Sbjct: 685 SYLV 688 >gi|215919288|ref|NP_820891.2| glycyl-tRNA synthetase subunit beta [Coxiella burnetii RSA 493] gi|206584172|gb|AAO91405.2| glycyl-tRNA synthetase beta chain [Coxiella burnetii RSA 493] Length = 692 Score = 583 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 222/722 (30%), Positives = 363/722 (50%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 8 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 67 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 68 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 125 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 126 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR + D + Sbjct: 176 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRRE-KIRDLIQ 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A++ E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 235 KAASEKGEAIIDEGLLEEVTGMVEWPVILVGNFKAEFLKLPPEVLITTMKVHQRTFPIKN 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ ++ GN RV+ ARL DA F+ D Sbjct: 295 KNGDLLPYFIIVSNIESK-NPKRVIVGNERVINARLADASFFYDND-------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L RA Sbjct: 340 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAARA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N +S Sbjct: 392 GLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 452 PCVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 511 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L D+ L IK + Sbjct: 512 NYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPDDPLDFDRRIKAVQH 571 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 572 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 629 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 630 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 689 Query: 700 KI 701 + Sbjct: 690 LL 691 >gi|169830681|ref|YP_001716663.1| glycine--tRNA ligase [Candidatus Desulforudis audaxviator MP104C] gi|238688220|sp|B1I1T4|SYGB_DESAP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169637525|gb|ACA59031.1| Glycine--tRNA ligase [Candidatus Desulforudis audaxviator MP104C] Length = 688 Score = 583 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 203/726 (27%), Positives = 328/726 (45%), Gaps = 68/726 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D +LEI +EEIPAR A +L+ LL E + Y ++ Y TP RL LY++ L+ Sbjct: 3 ADLVLEIGTEEIPARFLPPALAELAEKGRALLAEYRLAYADLAAYGTPRRLTLYVRDLAG 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++E GP G KA GF RS G+ + + + AV + Sbjct: 63 DQAPLVQEIKGPPKKAAFDIDGVPTKAALGFARSQGVAVED--LVTRAVGPVEYVYAVRQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L + P I + +P+ MRW F ++RP++ ILC+ ++ Sbjct: 121 ETGRPAAEILAELGPRLIGALVFPRPMRWGDQD-----FRFVRPIRWILCV-----HGDR 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I+ + + G T+GHRF + + V + Y LEE V++DP RR + Sbjct: 171 VIEFTVAGVRSGPHTWGHRFLSAGRLLVTTAGDYFTLLEENFVIVDPARRREMVWEQVRA 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A + +D +LL E+ L+E+ F G F + YL LPE ++ ++ +Q+ F R Sbjct: 231 AAAAESGTVADDPELLAEVADLLEYPSAFCGCFPESYLELPEPVLVTPMREHQRYFPVRD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L F+ V N ++ I GN +V+ ARL DA F++ D Sbjct: 291 GTGRLMPFFVGVHNG-TAEHLNLIRSGNEKVLRARLADAAFFFRED-------------- 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LV 411 L PL R L VVF +GT E+V R+ L ++ + D Sbjct: 336 ------LEVPLPDRGPELK--KVVFQESLGTMHEKVERLTALAGYLSSALGLDETERAQA 387 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA VLSK DL T +V EFPELQG +G+EYA+ E + +AI E P E +P Sbjct: 388 HRAAVLSKNDLLTSMVYEFPELQGIMGREYALRAGEAPAVAEAIREQYLPAPGGEELPAT 447 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 + + ++LAD+ D L+ + + +P+GS+DPYALRR LGI ++L+ + L F + Sbjct: 448 RAGLVLALADRADNLVGAFGMGVQPTGSQDPYALRRQALGICHLLLDTPAYLDLDDFFRE 507 Query: 532 Q-----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 L FF RL++ DR + + ++EA L + ++ + Sbjct: 508 AYAAYGGRLTVEAGEVAAQLADFFGQRLRVLFQDRGLSYGVVEAALAAGHADVRDAWERA 567 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + F S + R + + P E LY Sbjct: 568 TAVATFQSHPAFADISTAFTRANNLAKNA------AGTRVEPALFKDPVEHTLYQAFLQV 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ + +RY L + EP++ FFD V+V V++ VR+NRL+LL+ + ++ Sbjct: 622 REQVEAQIARRRYGAALAALAELREPVDRFFDGVMVMVEEAAVRENRLALLRLVADLFKG 681 Query: 695 VINVQK 700 + ++ K Sbjct: 682 IADLSK 687 >gi|260426987|ref|ZP_05780966.1| glycyl-tRNA synthetase, beta subunit [Citreicella sp. SE45] gi|260421479|gb|EEX14730.1| glycyl-tRNA synthetase, beta subunit [Citreicella sp. SE45] Length = 740 Score = 583 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 260/764 (34%), Positives = 390/764 (51%), Gaps = 89/764 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL ++ L E G+ Y + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKLVTNGLVEAGLTYSGAAAFSTPRRLTLAVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+V A KAI+GFLR G+ C++++D KKG V AV+ KP R Sbjct: 61 AASPATREERRGPKVDAPGKAIEGFLRGAGVTR-EQCEVRED-KKGAVLYAVIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ ++ PWPKSMRW + W+RPL ILC+L E A +++ L++ Sbjct: 119 AEIVAEVLETTVRNFPWPKSMRWGAG-----SLRWVRPLHRILCVLTTE-AGAEVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G IT GHRF P +V S + Y L+ + V+L PE R I +DA A A G Sbjct: 173 DGIWAGKITQGHRFMGGAPFEVTSFEDYETKLKRSKVILSPEERAETIWHDATNRAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVEW V MG + +L LP E+++ ++K +QK F + Sbjct: 233 LEVVEDRGLLAEVSGLVEWPVVLMGKIGEDFLDLPPEVLQTSMKEHQKFFSVKNPASGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ +D GA I+ GN +V++ARL DA FW+ D Sbjct: 293 EGFVTVANVETADDGATILAGNDKVLSARLSDAKFFWENDLRVAKQDG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ ARL +V FH K+G+Q +R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 341 ----LEAWTARL--ANVTFHNKLGSQKDRIDRIAALAREIAPMVGADAGLAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A +EH P GP ++VPT +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPAEVAAACQEHYSPLGPSDDVPTAAVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF--- 537 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++L N + + L + ++ Q L Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLANGLRLHLDRLVDAQLLRHQITT 514 Query: 538 ---------------------FHDRLKLYLHDRDIRHDLIEAILRPENDNLLT-----IV 571 F + + ++ ++ Sbjct: 515 DGNKDAAMLDDLLSEIAHHGVFGSAARTIIEQARSDAPSWLPVVENHAPDVSDDLVAFFH 574 Query: 572 DLIK-----------HLNEFFSSAKGEKFL----------------------LSAKRIFQ 598 D +K ++ + + KR Sbjct: 575 DRLKVYLRDEGIRHDVIDAVLAMPNRDDLALVVARARALMEVLNTEDGANLVQGFKRANN 634 Query: 599 ILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL E+K+ E S ++ E EK L+A + I+ +M + + + ++ Sbjct: 635 ILTQAEEKDGVEYSFGADVKFAETEEEKALFAALDTADASIKPAMASEEFAAAMTAMAAL 694 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FF+ V VN ++ VR NRL+LL I++ L V ++ ++ Sbjct: 695 RGPIDAFFEAVQVNAENAVVRRNRLNLLSRIRHTCLQVADLTRV 738 >gi|256828796|ref|YP_003157524.1| glycyl-tRNA synthetase subunit beta [Desulfomicrobium baculatum DSM 4028] gi|256577972|gb|ACU89108.1| glycyl-tRNA synthetase, beta subunit [Desulfomicrobium baculatum DSM 4028] Length = 693 Score = 583 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 210/727 (28%), Positives = 335/727 (46%), Gaps = 64/727 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI EE+PAR +L+ LL E G+ Y + TP RL + + GLS Sbjct: 1 MRHFVLEIGVEEMPARFLPLLDRELADRFSALLSEAGLAYGRVATASTPRRLVVDITGLS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + GP G KA GF +S ++ D + KG+ Sbjct: 61 AVQKTEEIVVSGPPARIAFDADGNPTKAGLGFAKSQNVEF--DQIYVEKTDKGEYLALKK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R ++L + + +PK M+W + RP++ IL +L + Sbjct: 119 TVGGRTAGEILAETCMAILPNLTFPKKMQWMGKECT-----FGRPVRWILAML-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDA 232 +I+ + N T GHR P P V D Y R L + V+L R+ AI + Sbjct: 169 QIVPFAFAGLTASNQTRGHRVMGPGPFTVPHADEYARILNDQGKVILHAADRKQAIRAEG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 RLA+ +G + + LL+++ LVE + +G F +K+L LP E++ +++T+QK F Sbjct: 229 DRLAAEMGGSVEWLESLLDQVANLVETPRAMLGGFHEKFLELPAEVLLTSMETHQKSFGL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G L F+ +NI++ + A + +G RV+ ARLEDA FW+ D Sbjct: 289 RGADGKLLPYFLTAANIESRE-PALVRKGWERVLRARLEDARFFWEAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-V 411 + D + +LD V+F +GT G++ R+ L IA + ++ + Sbjct: 336 --------CAATFDHWLDKLD--KVIFIGPLGTMGDKTRRLEKLAAFIASRVAPELGESM 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSKADL +E+V EF +LQGK+G YA Q E+ + +A+ E P G +P++ Sbjct: 386 RRAGRLSKADLVSEMVYEFDDLQGKMGGIYARRQGESQTVAEALYEQYLPAGQDSPLPSS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K +SLADKLD L + + P+G+ DPYALRR LG+ RIILE + + + Sbjct: 446 KAGAILSLADKLDNLAGCFGLGMMPTGAADPYALRRNALGVCRIILEMGLQVDIEVLLRE 505 Query: 529 ---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + L+ FF RL+ Y + + I +IEA + P ++ Sbjct: 506 AQKGYAGVTWKFGEDEALEKLMDFFGQRLRAYWNGQGIPTLVIEAAMAPGFTDIHDTWLR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ L EF E +L+ KR I+ + ++++S + L ++AEK +A + Sbjct: 566 VRALAEFSREDDFEASVLTFKRAANIIRKQ--ADQDLSGAVREDLLEVDAEKSFWATLQG 623 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 E Y Q+ L + ++ FFD V+V DD +R NRL+LL + N + Sbjct: 624 IEPVWAELAATADYAQMLSRLRVLRPAVDGFFDGVMVMCDDLALRTNRLNLLYRLVNTLG 683 Query: 694 IVINVQK 700 V + K Sbjct: 684 RVADFGK 690 >gi|164685872|ref|ZP_01947493.2| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165922515|ref|ZP_02219686.1| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii RSA 334] gi|164601389|gb|EAX31882.2| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165916720|gb|EDR35324.1| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii RSA 334] Length = 689 Score = 582 bits (1501), Expect = e-164, Method: Composition-based stats. Identities = 221/722 (30%), Positives = 362/722 (50%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 5 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 65 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 123 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR + D + Sbjct: 173 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRRE-KIRDLIQ 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A++ E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 232 KAASEKGEAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIKN 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ ++ GN RV+ ARL DA F+ D Sbjct: 292 KNGDLLPYFIIVSNIESK-NPKRVIVGNERVINARLADASFFYDND-------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L RA Sbjct: 337 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N +S Sbjct: 389 GLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 449 ACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L + L IK + Sbjct: 509 NYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 569 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 627 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|212217707|ref|YP_002304494.1| glycyl-tRNA synthetase subunit beta [Coxiella burnetii CbuK_Q154] gi|212011969|gb|ACJ19349.1| glycyl-tRNA synthetase beta chain [Coxiella burnetii CbuK_Q154] Length = 692 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 221/722 (30%), Positives = 362/722 (50%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 8 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 67 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 68 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 125 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 126 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR + D + Sbjct: 176 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRRE-KIRDLIQ 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A++ E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 235 KAASEKGEAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIKN 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ ++ GN RV+ ARL DA F+ D Sbjct: 295 KNGDLLPYFIIVSNIESK-NPKRVIVGNERVINARLADASFFYDND-------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L RA Sbjct: 340 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAARA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N +S Sbjct: 392 GLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 452 ACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 511 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L + L IK + Sbjct: 512 NYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQH 571 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 572 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 629 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 630 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 689 Query: 700 KI 701 + Sbjct: 690 LL 691 >gi|115379224|ref|ZP_01466340.1| glycyl-tRNA synthetase, beta subunit [Stigmatella aurantiaca DW4/3-1] gi|310822232|ref|YP_003954590.1| glycyl-tRNA synthetase subunit beta [Stigmatella aurantiaca DW4/3-1] gi|115363756|gb|EAU62875.1| glycyl-tRNA synthetase, beta subunit [Stigmatella aurantiaca DW4/3-1] gi|309395304|gb|ADO72763.1| Glycyl-tRNA synthetase, beta subunit [Stigmatella aurantiaca DW4/3-1] Length = 703 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 201/733 (27%), Positives = 338/733 (46%), Gaps = 70/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLE+ +EEIPA A EDL I+ L E + + +R Y TP RL +++K + Sbjct: 1 MARDLLLEVGAEEIPASFIGPALEDLQRIITTRLAEGRLKHGEVRTYGTPRRLAVWVKDV 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E+LGP G A F S + + KG+ A Sbjct: 61 ADAGEDVTSEKLGPSAKAAFDKEGKPTVAATKFAESLKIPVSELG--RTQTPKGEYLSAR 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +++ R ++L ++ A+ + + KSMRW ++ RP++ I+ +L + Sbjct: 119 VQEKGRPAAELLPEVLHAAVHGINFRKSMRWGDVD-----LAFARPVQWIVALLGGD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ + ++ G T+GHRF +P I++ Y LE+A V+ D RR +L Sbjct: 171 --VLPVVFGDVKSGRTTHGHRFLSPGAIELARPADYEAVLEKAHVVPDIAKRRAMLLQKV 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A G +L+ED+ L++++ LVE +G+FD ++L LP E++ +K++Q+ F Sbjct: 229 RAVAQGTGGQLLEDEALVDQVTNLVELPSPVVGTFDARHLDLPSEVLVQEMKSHQRYFSL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI VSN D ++G RV+ +RL D F+ D+ Sbjct: 289 TDAQGKLLPKFIAVSNTPVKDE-TLSLRGYERVLRSRLADGRFFFDEDR----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA--L 410 PL+ R+ +L VV+ ++G+ E+V R R L +A+ + Sbjct: 337 ---------KAPLEGRVEKLSR--VVWQGQLGSYAEKVERFRTLAVWLAEQTGKNEHSTT 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA L+KADL T +V EFPELQG +G+EYA E + AI EH PR + +P+ Sbjct: 386 IQRAATLAKADLVTGMVGEFPELQGVMGREYARAGGEPEAVALAIFEHYLPRNANDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + LAD+LD+L +AI + P+G+ DP+ LRRA L II I+ LS Sbjct: 446 QDPGALIGLADRLDSLCGIFAIGKAPTGAADPFGLRRACLAIINIVFGRGYRFSLSAAVG 505 Query: 529 --------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++ FF RLK + + R D++EA+L D+L+ Sbjct: 506 EALRLLSPKIANVKRKAGEPEPREQILEFFRGRLKALWSE-NYRTDVVEAVLAVGFDDLV 564 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 ++ L+ A ++ KR+ I+ + K + +P L E EK L+ Sbjct: 565 AARKRLEALSGIVGRADFTPLAVAFKRVVNIVEKQGK--DVARGQTNPDKLRDEPEKNLH 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + + + + + + + ++ FFD+V V +D E+R+NR+ L I Sbjct: 623 SAFTQARGKVAQYVQADDFSSALKEITGLKPAVDTFFDKVTVMAEDPELRENRVRFLTEI 682 Query: 689 KNIILIVINVQKI 701 + V + KI Sbjct: 683 GALFNQVADFSKI 695 >gi|189082265|sp|A9KBT7|SYGB_COXBN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS Length = 689 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 221/722 (30%), Positives = 362/722 (50%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 5 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 65 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 123 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR + D + Sbjct: 173 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRRE-KIRDLIQ 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A++ E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 232 KAASEKGEAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIKN 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ ++ GN RV+ ARL DA F+ D Sbjct: 292 KNGDLLPYFIIVSNIESK-NPKRVIVGNERVINARLADASFFYDND-------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L RA Sbjct: 337 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N +S Sbjct: 389 GLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 449 ACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L + L IK + Sbjct: 509 NYAVELPNVNVANQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 569 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 627 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|209363714|ref|YP_001423632.2| glycyl-tRNA synthetase subunit beta [Coxiella burnetii Dugway 5J108-111] gi|207081647|gb|ABS77223.2| glycyl-tRNA synthetase beta chain [Coxiella burnetii Dugway 5J108-111] Length = 692 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 221/722 (30%), Positives = 362/722 (50%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 8 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 67 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 68 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 125 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 126 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR + D + Sbjct: 176 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRRE-KIRDLIQ 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A++ E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 235 KAASEKGEAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIKN 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ ++ GN RV+ ARL DA F+ D Sbjct: 295 KNGDLLPYFIIVSNIESK-NPKRVIVGNERVINARLADASFFYDND-------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L RA Sbjct: 340 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAARA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N +S Sbjct: 392 GLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 452 ACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 511 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L + L IK + Sbjct: 512 NYAVELPNVNVANQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQH 571 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 572 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 629 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 630 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 689 Query: 700 KI 701 + Sbjct: 690 LL 691 >gi|146291117|ref|YP_001181541.1| glycyl-tRNA synthetase subunit beta [Shewanella putrefaciens CN-32] gi|166227927|sp|A4Y1A9|SYGB_SHEPC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145562807|gb|ABP73742.1| Glycine--tRNA ligase [Shewanella putrefaciens CN-32] Length = 689 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 211/722 (29%), Positives = 340/722 (47%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATILLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ Sbjct: 293 NAGKLLPNFIFVANIESKD-PAQIISGNEKVVRPRLADAEFFFNTDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 339 -------KHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 509 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTHLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I L AE+ L A +++ + Sbjct: 570 FRSLEASGALAAANKRVSNILA---KVEGALPTTIDASLLTEAAEQALAAKLNELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|120596839|ref|YP_961413.1| glycyl-tRNA synthetase subunit beta [Shewanella sp. W3-18-1] gi|166227929|sp|A1RDW4|SYGB_SHESW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120556932|gb|ABM22859.1| Glycine--tRNA ligase [Shewanella sp. W3-18-1] Length = 689 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 213/722 (29%), Positives = 341/722 (47%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKIVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATILLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ Sbjct: 293 DAGKLLPNFIFVANIESKD-PAQIISGNEKVVRPRLADAEFFFNTDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 339 -------KHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP---------- 524 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 509 Query: 525 -----LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 LS ++ F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTHLSNVNASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I L AE+ L A +++ + Sbjct: 570 FRSLEASGALAAANKRVSNILA---KVEGALPTTIDASLLTEAAEQALAAKLNELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|319424423|gb|ADV52497.1| glycyl-tRNA synthetase, beta subunit [Shewanella putrefaciens 200] Length = 689 Score = 581 bits (1499), Expect = e-163, Method: Composition-based stats. Identities = 211/722 (29%), Positives = 340/722 (47%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATILLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ Sbjct: 293 DAGKLLPNFIFVANIESKD-PAQIISGNEKVVRPRLADAEFFFNTDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 339 -------KHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 509 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTHLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I L AE+ L A +++ + Sbjct: 570 FRSLEASGALAAANKRVSNILA---KVEGALPTTIDASLLTEAAEQALAAKLNELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|261405620|ref|YP_003241861.1| glycyl-tRNA synthetase subunit beta [Paenibacillus sp. Y412MC10] gi|261282083|gb|ACX64054.1| glycyl-tRNA synthetase, beta subunit [Paenibacillus sp. Y412MC10] Length = 691 Score = 581 bits (1499), Expect = e-163, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 344/733 (46%), Gaps = 74/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI EE+PAR A E L L+ L+ + + + + TP RL ++++ + Sbjct: 1 MSKDLLFEIGLEEVPARFLRAAMEQLQDKLVKWLETSRIAHGEVTAFATPRRLAVWVQNV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF +S G+ S K+ + Sbjct: 61 ADKQEDVSEEVKGPSRKIALDDSGQWSKAALGFAKSQGVDPES--FTFKELGGVEYIYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +L + + + +PK+MRW F ++RP+K ++ +L +E Sbjct: 119 KNSVGVDTKSILSEGLLGILTSMTFPKNMRWGAHE-----FKFVRPIKWMVAMLGSET-- 171 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +DL++ + GN+T GHRF + + Y L E V++D R+ I++ Sbjct: 172 ---VDLEITGVKAGNVTRGHRFLGGEAV-IPEASAYRDVLREQHVIVDVNERQEMIVSQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA + DLLEE++ LVE V GSFD +L +P+E++ +++ +Q+ F Sbjct: 228 QALAQEKDWNIAIKDDLLEEVLFLVETPTVLYGSFDSSFLHIPQEVLITSMREHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L F+ V + + I +GN +V+ ARL DA F++ DQ Sbjct: 288 LDKQGQLLPYFVTVRSGDSR-SLDVIARGNEKVLRARLSDAKFFYEEDQKLQIK------ 340 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 +++L+ +VFH ++GT G++V RIR + +++ ++ D Sbjct: 341 --------------DALSKLE--SIVFHEELGTIGDKVRRIRRISDQLSAKLNVSADAAD 384 Query: 413 ---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA + K DL T++V EFPELQG +G++YA E A+ EH +PR ++VP Sbjct: 385 SVSRAADICKFDLVTQMVYEFPELQGVMGEDYARKAGEKEHVAKAVFEHYQPRFAGDSVP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + VS+ADK+DT++ ++I P+GS+DPYALRR GI++IILE+K+ + LS Sbjct: 445 STTVGSIVSIADKIDTIVGCFSIGIIPTGSQDPYALRRQAAGIVQIILEHKLPVTLSDVF 504 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ++L FF R+K L + D R+D+++A++ D+++++ Sbjct: 505 GVALEVHENIRVLKRSTDEIRKDLKEFFGLRVKKLLSE-DQRYDVVDAVITAGFDHVVSV 563 Query: 571 VDLIKHL-NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 V L N S + + S R+ + A K ++ + E +LY Sbjct: 564 VSRGHALMNAVESVQDFKTTVESFNRVSNLAAKAGKA------AVNAELFTESEENKLYE 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + ++ + LL + EPI FFD V+V +D VR NRL+LL I Sbjct: 618 AWNAIRADYHAALQAADGERSLSLLSGLREPITGFFDSVMVMAEDEAVRANRLALLSGID 677 Query: 690 NIILIVINVQKIV 702 + + K+V Sbjct: 678 GDLKRYADFTKLV 690 >gi|307292913|ref|ZP_07572759.1| glycyl-tRNA synthetase, beta subunit [Sphingobium chlorophenolicum L-1] gi|306880979|gb|EFN12195.1| glycyl-tRNA synthetase, beta subunit [Sphingobium chlorophenolicum L-1] Length = 736 Score = 581 bits (1497), Expect = e-163, Method: Composition-based stats. Identities = 256/767 (33%), Positives = 383/767 (49%), Gaps = 99/767 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ EEIPARMQ KA+EDL+ + L + G+ +++ + TP RL L + L Sbjct: 1 MTDFLLELRCEEIPARMQLKASEDLARLFTEELAKSGLKPESIDSFVTPRRLALIARNLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GPR A +A++GFLR TGL + V+ A + KP R Sbjct: 61 LETAAVSEEHKGPRTSAPAQALEGFLRKTGLTQDQL------EDRDGVWFATVNKPGRAS 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL +P I+ PWPKSMRW + W+RPL+ I+ IL E+++D+++ Sbjct: 115 AEVLAEAIPTVIRAFPWPKSMRWGRASQTTESLRWVRPLQGIVAIL-----GEELVDIEI 169 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G T GHRFH P I + Y L V+ + R++ I A A+A G Sbjct: 170 EGIRSGYATLGHRFHHPGEITIGGAHDYAEKLRACHVIASHQERQSIIEAKAAEAAAAHG 229 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ++EDK L+ E GL EW +G FD +L +P E+I+LT++ NQK FV R G LA Sbjct: 230 YTVIEDKGLVTENAGLTEWPVPLLGDFDPAFLEVPPEVIQLTLRINQKYFVLRDTSGKLA 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI +NI+A DGGAAIV GN +V+AARL DA FW++D+ Sbjct: 290 PAFICTANIEAKDGGAAIVAGNRKVLAARLSDARFFWEQDR------------------- 330 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL------------IDADV 408 L+ +L+ + FH K+GT ++V R+ L + + + Sbjct: 331 -KTKLEDHAKKLER--ITFHEKLGTVADKVERVAKLARWLVEEDIIPPLPQAGGAGGGLA 387 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L ++A L+KADL TE+V EFPELQG +G YA + + DAI +H KP G ++V Sbjct: 388 DLAEQAARLAKADLVTEMVGEFPELQGIMGGYYARAEGLPDAVADAIRDHYKPVGQGDDV 447 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID----IP 524 PT +++ VSLADKLDT+++F+AI+EKP+GSKDP+ALRRA LG+I ++L+N++ +P Sbjct: 448 PTAPLTVAVSLADKLDTIVSFFAIDEKPTGSKDPFALRRAALGVISLLLDNRLRTKLALP 507 Query: 525 LSQFIEDQN-----------------------------LILFFHDRLKLYLHDRDIRHDL 555 LS+ +E ++ FF DRLK+ + +RHDL Sbjct: 508 LSKAVEAVEITEFLGALSAAAEQFKGEPFALSNILQPIVLDFFADRLKVQQKEAGVRHDL 567 Query: 556 IEAILRPEN-DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE---------EK 605 I+A+ D+L+ ++ +K L F ++ G L KR IL E + Sbjct: 568 IDAVFALGGEDDLVRLLARVKALQSFVATDDGTNLLAGYKRAANILKKEGIESPSAPAKA 627 Query: 606 KNREISLEISPQYLLLEAEKRL-----------YAVISDFGTHIQESMDHKRYHQIGDLL 654 + + + + + L A + S+ + + L Sbjct: 628 GAQSGAAHPNSELPPSQEHGSLTYTPEPAEAALIAALDAAEPRATASVAAEDFEAAMAAL 687 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ PI+ FF+ V VN D R RLSLL ++ + V + KI Sbjct: 688 ATLRAPIDAFFETVTVNDADEAKRSARLSLLARVRKAVHAVADFSKI 734 >gi|258541399|ref|YP_003186832.1| glycyl-tRNA synthetase subunit beta [Acetobacter pasteurianus IFO 3283-01] gi|256632477|dbj|BAH98452.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-01] gi|256635534|dbj|BAI01503.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-03] gi|256638589|dbj|BAI04551.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-07] gi|256641643|dbj|BAI07598.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-22] gi|256644698|dbj|BAI10646.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-26] gi|256647753|dbj|BAI13694.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-32] gi|256650806|dbj|BAI16740.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653797|dbj|BAI19724.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-12] Length = 686 Score = 581 bits (1497), Expect = e-163, Method: Composition-based stats. Identities = 232/719 (32%), Positives = 367/719 (51%), Gaps = 53/719 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ +A E+L +L L + QN P R+ L + Sbjct: 1 MPELLIELFSEEIPARMQSQAGENLLRLLTEAL--APLHPQNAVAATGPRRIAASL-NID 57 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P + GPR GA KA+DGF R G+ + + ++ +P Sbjct: 58 ATVPGRTVSERGPREGAPDKALDGFTRKHGVTRDAL------TLQNGFWILEREEPAVSA 111 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 + + ++P +++ PWPKSMRW S+F+W+RPL+ ILCIL E + + Sbjct: 112 QAHIAAVLPDLLRRFPWPKSMRWGAG----SSFTWVRPLRRILCILDGETVPFSLAQGED 167 Query: 181 KEIP--CGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 N+T GHRF P + V S + + L + V++D RR I + LA++ Sbjct: 168 NGHNLVAANLTEGHRFLNPGAVAVSSAAEWRKTLHDRHVMVDAAERRKTITEGLNALAAS 227 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 GL++V D L++E+ GLVEW F+G D +++ LP E+++++++ NQ+ F R +G Sbjct: 228 EGLQIVPDAGLVDEVAGLVEWPVPFLGQIDAQFMELPAEVMQVSMRVNQRYFALRNSDGT 287 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 A F V+NI +D G IV GN RV+ AR DA HFW D+ Sbjct: 288 AAPRFAFVANIVPADDGTLIVTGNERVLRARFADARHFWDLDR----------------- 330 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + L R+ LD + FHA +G+QG+R R+ L +A ++ A A +RA LS Sbjct: 331 ---KQTLASRLKALD--SITFHASLGSQGDRTRRMVRLAGILADMVGAPKADCERAAKLS 385 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EFPELQG +G YA E+ + AI E PRGP ++VPT +S+ + Sbjct: 386 KTDLTTGMVGEFPELQGVMGGYYAKHDGESAAVAQAISEQYTPRGPGDSVPTAPVSVVLG 445 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------------S 526 LAD++D L+ F+A EKPSGS DP+ LRRA LG+IR+I EN + + L + Sbjct: 446 LADRIDMLVAFFAAGEKPSGSGDPFGLRRAALGVIRLIRENNLRLDLVRLFVLAAEALPA 505 Query: 527 QFIEDQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLNEFFS 582 + +L F +RL++ + RHD + AI +D +++ ++ L + Sbjct: 506 DLQDAPDLDLLPQFIAERLRVQVRSEGARHDCLAAISVDNSDTDIVRLLARAHALQDMLE 565 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + G+ L + +R IL IE+KK+ P + E+ L+ + +++ Sbjct: 566 TEDGKNLLAATRRAANILRIEDKKDGPHEDMPDPALFTQDEERALFDALERVEPAVEKDF 625 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +R+ S+ EP++ FF+ V VN + E+R NRL LL + ++ ++ + +I Sbjct: 626 AAERFTDAMREAASLREPLDKFFEVVTVNAPEPELRLNRLKLLSRVVRMMRLIADFSQI 684 >gi|167045601|gb|ABZ10251.1| putative glycyl-tRNA synthetase beta subunit [uncultured marine crenarchaeote HF4000_APKG10I20] Length = 688 Score = 581 bits (1497), Expect = e-163, Method: Composition-based stats. Identities = 219/727 (30%), Positives = 329/727 (45%), Gaps = 68/727 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LEI SEEIP+ A E + L + TP RL + +KG+ Sbjct: 1 MPELFLEIGSEEIPSGYVQPALEYMREELASFFSRNRIKAGVPEILGTPRRLVVSVKGVD 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +E GP + G KA GF R GL ++ KG+V A + Sbjct: 61 ALQEDIVELFHGPNISVAYDDQGKPTKAAIGFARGKGLDVSQLS--REKTPKGEVVCARV 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K R D L +P+ I +P+ K MRW+ P + RPL I + + Sbjct: 119 EKKGRPTPDHLNEFLPIFIGNIPFAKKMRWADKTRP-----FARPLHWITALFDGQPLG- 172 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 I CG+++ GHRF P +V+ L Y+ +L+DPE R+ IL Sbjct: 173 ----FSFDGIACGDLSQGHRFLKPDKFQVKDLASYLEKSANHFLLVDPEVRKQKILEQVQ 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA G + ED +LL + LVE+ G FD ++L LP+EL+ +T+K +QK F Sbjct: 229 ILAQEAGGFVEEDPELLNIVNYLVEFPVAIRGDFDPRFLELPKELLVMTMKHHQKYFPVS 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI +SN+ A G I GN RV+ ARLEDA F+ D+ Sbjct: 289 DGKGNLLPGFITISNMSA---GHEIKNGNERVLRARLEDARFFYNEDK------------ 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVD 412 K LD + L VVF K+GT E++ RI L + ++ D Sbjct: 334 --------KKNLDDFVESLK--GVVFQKKLGTLYEKMERICDLARILSTHACPDKEPQAL 383 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L KADL T +V EFPELQG +G YA E + AI+EH +P ++ P ++ Sbjct: 384 RAGRLCKADLVTLMVYEFPELQGIMGGYYATHSGEEPTVAQAIQEHYRPAFAGDDPPASE 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 + +++ADKLDT++ + PSGS+DPY LRR LGII+I L + L +E+ Sbjct: 444 LGAVIAVADKLDTILGCIGVGLIPSGSEDPYGLRRNALGIIQIFLHRGWQVSLDNLVEEG 503 Query: 532 ----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +++ F R K YL +D I+ +L D+++ I + Sbjct: 504 LRSMGSKIKLDPETIKNHVMELFSQRYKTYLDAEGFPYDAIDCVLSTGLDSIVDIRAKVS 563 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +E E ++ +R+ IL N E E+ L AEK+L+ Sbjct: 564 AFSELKKQPYFEPLAIAFRRVVSIL------NDEAEGEVDTGLLNEPAEKKLFEEYLKVR 617 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + +K + Q + + I ++ FFD+V+V VDD +R NRL LL I + + Sbjct: 618 GPVFRHIQNKEFSQALEKIVEIKPAVDRFFDEVMVMVDDVSLRKNRLHLLHQISGLFSGL 677 Query: 696 INVQKIV 702 + +I+ Sbjct: 678 ADFSRII 684 >gi|197104831|ref|YP_002130208.1| glycyl-tRNA synthetase, beta subunit [Phenylobacterium zucineum HLK1] gi|238690133|sp|B4R9A9|SYGB_PHEZH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|196478251|gb|ACG77779.1| glycyl-tRNA synthetase, beta subunit [Phenylobacterium zucineum HLK1] Length = 669 Score = 581 bits (1497), Expect = e-163, Method: Composition-based stats. Identities = 249/694 (35%), Positives = 380/694 (54%), Gaps = 44/694 (6%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +AA DL + L EG++ + ++ + P RL L +GL ++ EE G Sbjct: 13 IPARMQAQAARDLERLARERLAAEGLLPEALKTFAGPRRLTLVAEGLPAAQADRREELKG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P+VGA ++A++GFLR TGL D +++D V+ A + KP R +++ +V + Sbjct: 73 PKVGAPEQALEGFLRKTGLT--RDQLVERDG----VFFATIEKPGRPTPEIVAEMVEAIL 126 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 + PWPKSM S W+RPL+ ILC+ E ++ ++ I G+++ GH Sbjct: 127 RTFPWPKSMVSG-----TSKLRWVRPLRRILCVFDGE-----VVPFEVDGIASGDLSEGH 176 Query: 193 RFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 RF + P V+ + Y L V+LD + R+ IL A L A LELVED LL+ Sbjct: 177 RFMSDGQPFLVKDFEGYAAGLSHRSVVLDADERKERILEAAKTLCFARNLELVEDAGLLD 236 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-VLANCFILVSNIQ 310 E+ GLVEW +G D +L LP E+IR +++ +Q+ F R G LA F+ V+NI Sbjct: 237 EVAGLVEWPVPVLGDMDPAFLDLPPEVIRTSMRVHQRYFAVRDPAGGKLAPHFLTVANIA 296 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 A DGGA I +GN++V++ARL DA FW D+ L+ R+ Sbjct: 297 ARDGGATIAKGNAKVLSARLSDARFFWDEDR--------------------KVRLEDRLE 336 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLCTEIV 427 +L V FHAK+GT ERV RI L ++A + + +A L+KADL + +V Sbjct: 337 KLK--GVTFHAKLGTMYERVQRIEALAGELAPFVRDEPETRTKAVQAARLAKADLVSGVV 394 Query: 428 REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLI 487 EFPELQG +G YA + + DAI H +P+GP + VP + ++ TV+LADKLDTL+ Sbjct: 395 GEFPELQGIMGGYYAEAEGLDPEVVDAIRSHYRPQGPNDAVPVSSVAATVALADKLDTLV 454 Query: 488 NFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLH 547 +F+ I EKP+GS+DP+ALRRA LG+IRI+LE + +PL +F+ ++ FF DRL + L Sbjct: 455 SFFGIGEKPTGSRDPFALRRAALGVIRIVLETRTRLPLKRFVS-DEVLDFFADRLAVLLR 513 Query: 548 DRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN 607 ++ RHDL+ A+ +D+L+ IV ++ L+ F + G L KR IL EEKK Sbjct: 514 EQGKRHDLVAAVFALGDDDLVRIVARVEVLSAFLKTEDGANLLAGYKRAVNILRAEEKKG 573 Query: 608 REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 + E + E L ++ + +++ + + L + P++ FFD+ Sbjct: 574 PLPAGEPAQAAGAPAEEAALVQAVAALDARLGPALEREDFEGAMTELAKLRGPVDAFFDK 633 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VLVN D R+NRL LL +++ + V + ++ Sbjct: 634 VLVNSDVPAERENRLRLLAKVRDAMGRVADFSQV 667 >gi|212632930|ref|YP_002309455.1| glycyl-tRNA synthetase subunit beta [Shewanella piezotolerans WP3] gi|226737059|sp|B8CH76|SYGB_SHEPW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|212554414|gb|ACJ26868.1| Glycyl-tRNA synthetase, beta subunit [Shewanella piezotolerans WP3] Length = 689 Score = 580 bits (1496), Expect = e-163, Method: Composition-based stats. Identities = 215/722 (29%), Positives = 350/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE LK+ + +++ + P RL + + L+ Sbjct: 5 NLLIEVGTEELPPKSLRKLAESFLNNFTDELKKAELTFESAVWHAAPRRLAINVNQLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L + Sbjct: 65 QADKVVEKRGPAVAQAFDADGNPTKAAMGWARGNGITVEQADRLKTD--KGEWLLHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + ++ K+P PK MRW + + +IRP+ ++ +L +E + Sbjct: 123 VGVETKSLIAAMAQRSLDKLPIPKPMRWGS-----NTTQFIRPVHTVTMLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 ++ +L I I GHRF I++ D+Y+ L+E V + E R+ I DA Sbjct: 173 VEGELLGIKSDRIIRGHRFMGKPSIELDHADNYLSVLKEQGKVDANYEARKAQIKADAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKLGGVADLEDDLLEEVTSLVEWPVVLTASFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F++ D+ N Sbjct: 293 DAGQLLPNFIFVTNIESKD-PQQIISGNEKVVRPRLADAEFFFETDKKN----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R++ L+ VVF ++GT +RV RI + IA I A+ RA Sbjct: 341 ---------SLESRLSSLET--VVFQKQLGTIKQRVERISAMAAYIATSIGANSEEAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A+ E KP+ + VPT +S Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVAVALSEQYKPKFSGDTVPTAPVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 I V+LA+KLDTL+ + I + P G+ DP+ALRRA +G++RI LEN + + L Sbjct: 450 ICVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRICLENNLPLDLVDLIAKAQE 509 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ FF R + + D+ I D+I A+L IK + Sbjct: 510 LHGENLTNDKAPEQVLEFFMGRFRAWYQDQGISVDVILAVLARRPTAPADFESRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K E+ I L+ AEK L A +++ + Sbjct: 570 FRTLEQALALAAANKRVSNILA---KVEGELPATIDEALLVEAAEKALAAKLAELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ E ++ FF+ V+V DD +++NRL+LL +++ L ++ Sbjct: 627 PLFAAANYQEALALLASLRESVDTFFEDVMVMADDEALKNNRLALLSSLRDQFLHAADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|52842066|ref|YP_095865.1| glycyl tRNA synthetase, beta subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629177|gb|AAU27918.1| glycyl tRNA synthetase, beta subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 688 Score = 580 bits (1496), Expect = e-163, Method: Composition-based stats. Identities = 195/722 (27%), Positives = 352/722 (48%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S + D K KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSEGNPTPALLGFAKSCSVTV--DALTKIQTDKGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V +++ +P K MRW + RP+ + + +E K Sbjct: 122 EGTKTKDLLPGLVSQSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHK- 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y ++ A V+ D RR AI++ L Sbjct: 176 ----ILGVTSGCHSRGHRFHHPQEIRINSAASYEDQMKNAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G ++ ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + Sbjct: 232 AAPLGASVIMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNM 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI VSNI +S+ ++ GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLPYFITVSNIASSNPKQVVL-GNEKVMRARLSDAAFFFKQDK-------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + V+F K+G+ ++V RI+ + ++Q ++ L +RA Sbjct: 337 ------KQPLSAHIP--STEQVIFQVKLGSMYDKVQRIKAMMDHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +N+P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAIVATALNEQYMPRFSGDNLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SLAD++DTL+ +AI +KP+G KDP+ LRR L ++R+++ + LS I++ Sbjct: 449 ALSLADRMDTLVGIFAIGQKPTGVKDPFKLRRHALSVVRLLISISAPLNLSTLIKEALAN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKVD--IKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ EP++ FFD V+V V++ ++ NRL+ LQ ++ ++ V ++ Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNRLAHLQRLQELLQGVADIS 686 Query: 700 KI 701 + Sbjct: 687 ML 688 >gi|154686786|ref|YP_001421947.1| glycyl-tRNA synthetase subunit beta [Bacillus amyloliquefaciens FZB42] gi|154352637|gb|ABS74716.1| GlyS [Bacillus amyloliquefaciens FZB42] Length = 679 Score = 580 bits (1496), Expect = e-163, Method: Composition-based stats. Identities = 215/720 (29%), Positives = 349/720 (48%), Gaps = 61/720 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR H + L L G L E+ + + ++ + TP RL +Y+K Sbjct: 1 MSKQDLLLEIGLEEMPARFLHDSMVQLGEKLTGWLAEKNIAHGEVKLFNTPRRLAVYIKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G KD + Sbjct: 61 VAEKQADIQEEAKGPAKKIALDADGNWTKAAIGFSKGQGAGVDD--LYIKDVNGTEYVFV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +L + I + +PK+MRW T +IRP+K I+ + + Sbjct: 119 QKFQAGQETKTLLPQ-LENLIAGMHFPKNMRWGTQD-----LRYIRPIKWIIALFGKD-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + G T GHRF + V + Y + L+E V+ DP+ R+ I + Sbjct: 171 ---VIPFKITNVETGRNTQGHRFLG-QEVSVDAPSSYEKLLKEQSVIADPKERKQMIQSQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + D+DLL E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 227 LDALAAEKKWNIPIDEDLLNEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 287 VKDENGNLLPHFITVRNG-NSHAIENVARGNEKVLRARLSDAAFFYKEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 +D+ + +L+ ++VFH ++G+ G++V R+ + K+A + AD Sbjct: 338 ------------NIDENVKKLE--NIVFHEELGSLGDKVRRVTAIAGKLAVRLKADEQTQ 383 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR V Sbjct: 384 KLVKRAAEISKFDLVTHMIYEFPELQGVMGEKYARMLGEDDAVAAAVNEHYMPRAAGGEV 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID------ 522 P+ V+LADKLDT+ +F++I+ P+GS+DPY LRR GI+ I+++ Sbjct: 444 PSTFTGAVVALADKLDTIASFFSIDVIPTGSQDPYGLRRQASGIVSILIDRNWGISFKEL 503 Query: 523 IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + L++ ++ L+ FF RLK L+ DIRHD+IEA+L V + L + Sbjct: 504 LSLTETEKENELLDFFTQRLKYVLNAEDIRHDVIEAVLDSTELEPYAAVHKARVLEKHLG 563 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + ++ S R+ I E ++ I+P E EK+L+ + ES Sbjct: 564 TPGFKETAESLGRVISISKKGESRD------INPDLFENEQEKKLFDAYQKTKDSVAESF 617 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y Q +L + EPIE +F+ +VN DD ++ NRL+ + + ++I N+ ++ Sbjct: 618 ASKNYEQALAVLSGLKEPIEDYFNHTMVNADDEALKTNRLAQMTALADVIKSFANMNHLI 677 >gi|146329175|ref|YP_001209611.1| glycyl-tRNA synthetase, beta subunit [Dichelobacter nodosus VCS1703A] gi|229470696|sp|A5EV43|SYGB_DICNV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|146232645|gb|ABQ13623.1| glycyl-tRNA synthetase, beta subunit [Dichelobacter nodosus VCS1703A] Length = 689 Score = 580 bits (1496), Expect = e-163, Method: Composition-based stats. Identities = 203/721 (28%), Positives = 353/721 (48%), Gaps = 61/721 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 L+EI +EE+P R + A + + +L + + + + TP RL ++ L+ Sbjct: 5 TLLIEIGTEELPTRAVTELASAGAQLWDNVLTTALIPHGEIEAFGTPRRLAWRVRQLAVK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ ER GP + A KA GF S G+ + +KG + K Sbjct: 65 QTDQKIERKGPSLQAAKDKNNAWTKAALGFAASCGVDVEQLAI--ETTEKGQWLIFRGEK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + D+L + + K+P K MRW ++RP+ ++L + A + + Sbjct: 123 MGENVADLLPDLFAEVMDKLPIAKRMRWGDCDHA-----FVRPVHNLLVL-----ADDNV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 DL+ + +++ GHR H P+ ++ Y DLE A V++D E R N I L Sbjct: 173 WDLEFFGVASQHLSQGHRVHHAEPVAIRHAKTYEADLEAAYVIVDHETRCNRIREQVQAL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + + + L++E+ L EW G+FD+ +L +P E++ T++ +QK F Sbjct: 233 ARDLGGKALMPEALVKEVASLTEWPIAIAGAFDRSFLKMPPEVLITTMQDHQKTFAVMDT 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+N+++ + +GN +V+ R DA FW++D Sbjct: 293 LGTLLPYFIAVANLESRNEEEV-RKGNEKVIRPRFADAEFFWQQD--------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L +PL+ + +L+ V++ K+GT E+ R++ + ++ + AD V A Sbjct: 337 -----LKRPLEDYLPQLER--VIYQEKLGTLAEKTRRVQTIACELTAMTAADKNSVYTAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+K+DL T +V+EFPELQG +G+ YA+ Q + A+EE P + +P + I Sbjct: 390 RLAKSDLQTAMVQEFPELQGVMGRYYALHQGLSAEVAQALEEQYFPTAAGDKLPQTAVGI 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 T+S+A+KLDTLI ++I +P+GSKDPYALRR +G+IR+++E K+ + L+ ++E Sbjct: 450 TLSIAEKLDTLIGGFSIGAQPTGSKDPYALRRMAIGLIRLLIEKKVPLLLTPWLEKAAGQ 509 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ + +RL+ Y +++I ++++A+L DNL+ I ++ L F Sbjct: 510 FHDALGAKNFVMDVRAYILERLQAYYREQNIAPEIVQAVLALNGDNLVDIDQRVRALAPF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 +S F SAKRI IL KKN + L AEK L+ + Sbjct: 570 SNSDAALSFFASAKRIRNIL----KKNGTQQTAVRTDLLQESAEKHLWQQWEQMHNALLA 625 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ Y L S+ EP+E FF QV+V ++ +V+ NRL+LL ++ ++ ++ Sbjct: 626 AVSAGNYETALQQLGSLAEPLEAFFAQVMVMTENPDVQINRLALLTALQKGFELIADLSI 685 Query: 701 I 701 I Sbjct: 686 I 686 >gi|71909147|ref|YP_286734.1| glycyl-tRNA synthetase, beta subunit [Dechloromonas aromatica RCB] gi|123774244|sp|Q47A67|SYGB_DECAR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71848768|gb|AAZ48264.1| glycyl-tRNA synthetase beta chain [Dechloromonas aromatica RCB] Length = 712 Score = 580 bits (1495), Expect = e-163, Method: Composition-based stats. Identities = 200/742 (26%), Positives = 342/742 (46%), Gaps = 73/742 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYL 56 M + L+E++ EE+P + K E S L LK G+ ++ Y +P RL ++ Sbjct: 1 MSSKNLLVELFVEELPPKALKKLGEAFSAALANSLKNAGLAPATASITAYASPRRLAAHV 60 Query: 57 KGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDC-----QIKKDPK 104 ++ + +K + ++L P G A+ L G+ + +++ Sbjct: 61 TDVAAVAADKPVAQKLMPVAVGLDAAGNATPALLKKLAGLGIDADAAASVVASLRRENDG 120 Query: 105 KGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILC 164 K DV + + L+ + A+ +P PK M + S+ +++RP ++ Sbjct: 121 KADVLFFDSLAKGATLAEGLQKAIEAALAALPIPKVMTYQLQDG-WSSVNFVRPAHGLVA 179 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPE 222 + + ++ + + + G T+GHRF A P+ + D Y L V+ Sbjct: 180 LHGGD-----VVPVAVLGLNAGRETHGHRFEATVDPVVFANADEYASKLATDGAVIASFA 234 Query: 223 CRRNAILNDAHRLASAVG------LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPE 276 RR I A+ G L ++D+ LL+E+ LVE V +G F++++L +P+ Sbjct: 235 ERRAEIARQLEGAAAKAGQATGAALRPIDDEALLDEVTALVERPNVLIGQFEQEFLAVPQ 294 Query: 277 ELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHF 336 E + LT+K NQK F G L N F++VSNI D +A++ GN RVV RL DA F Sbjct: 295 ECLILTMKANQKYFPLLDATGKLTNKFLVVSNISPEDA-SAVIGGNERVVRPRLADAKFF 353 Query: 337 WKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVL 396 + +D+ K L+ R+ L VV+H K+GTQGER+ R+ + Sbjct: 354 FDQDR--------------------KKSLESRVIGLS--KVVYHNKLGTQGERMQRVAAI 391 Query: 397 GKKIAQLIDADVA--LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 + I + + + ++A VL+KADL T++V EFPELQG +G+ YA+ DA Sbjct: 392 ARAIGESLGGEALALHAEQAAVLAKADLLTDMVGEFPELQGTMGRYYALHDGLAAEIADA 451 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 +E+H KPR + +P + V+LADKL+TL+ + I + P+G +DP+ALRR LG+IR Sbjct: 452 VEDHYKPRFAGDTLPRGIVGTVVALADKLETLVGMFGIGQIPTGDRDPFALRRHALGVIR 511 Query: 515 IILENKIDIPLSQFIEDQN---------------LILFFHDRLKLYLHDRDIRHDLIEAI 559 ++ EN + +PL ++ L F +DRL L ++ ++A+ Sbjct: 512 MLAENNLALPLDHLLQTAAAPFASVDGFKAAEAPLADFIYDRLAGSLREQGYTAQEVDAV 571 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 + L I + + F + + KR+ IL K + + L Sbjct: 572 VSQRPQRLGDIPKRLAAVRAFSGLPESAALAAANKRVGNILK---KVENAVEAVVDNALL 628 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 AE L+ + + + Y + L ++ P++ FFD V+VN +D +R Sbjct: 629 KEAAEIALHDALVEVVPQADAAFVTGDYSESLQALAALRAPVDAFFDDVMVNAEDPALRA 688 Query: 680 NRLSLLQYIKNIILIVINVQKI 701 NRL LL + + V ++ K+ Sbjct: 689 NRLGLLAKLHAAMNQVADISKL 710 >gi|116749873|ref|YP_846560.1| glycyl-tRNA synthetase subunit beta [Syntrophobacter fumaroxidans MPOB] gi|116698937|gb|ABK18125.1| Glycine--tRNA ligase [Syntrophobacter fumaroxidans MPOB] Length = 694 Score = 580 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 221/722 (30%), Positives = 343/722 (47%), Gaps = 67/722 (9%) Query: 6 LEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPE 65 +EI EEIPA A E +S + L E V TP RL L + +S Sbjct: 11 IEIGCEEIPAGYIAPALESMSRQMTRFLDENRVGRGEPHVTGTPRRLILSIPDVSTQQEA 70 Query: 66 KIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 E +GP G +A +GF R G+ K+ +G+ + + Sbjct: 71 CTTEIIGPPKQAAFDAGGKPTRAAEGFARGQGVTIED--IRIKETPRGEYLFILREESGS 128 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 +L+ ++P I +P+PKSMRW+ + ++ RP++ I+ +L E +DL Sbjct: 129 ATRALLEKMLPDFIAHIPFPKSMRWA-----GLSVTFARPVRWIVALLGRET-----LDL 178 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 + +I G+ GHRF +P + V D + R+L + V+ + R+ I A Sbjct: 179 EYGDIRSGDKAMGHRFMSPEWLTVTDYDSHTRNLAKHYVIAEIAERKKLIAEKIREAAVG 238 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 VG ++ED++LL+E+ +VE+ + +G F++KYL LP EL+ IK +Q+ F +G Sbjct: 239 VGGGILEDEELLDEVTQIVEYPEPIVGEFEEKYLELPPELLITVIKKHQRYFAVTDTDGK 298 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L F+ V+N D + GN RVV ARLEDA +++ DQ Sbjct: 299 LLRYFVTVANTIPRD-PRLVAAGNGRVVRARLEDARFYYREDQ----------------- 340 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALVDRAIVL 417 LD R+ +L VVFH+K+GT E+ R L + + + I D + + RA L Sbjct: 341 ---KVRLDDRVEQLK--GVVFHSKMGTSWEKKERFTALARWLGERIAPDRLETLLRAAHL 395 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 KADL T +V EFPELQG +G+ YA LQ E + AI EH P ++P + Sbjct: 396 CKADLVTGMVGEFPELQGVMGRAYARLQGEPEAVAAAIFEHYLPNRAGGSIPEGMEGALL 455 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 S+ADK+DT+ + + PSG+ DP+ALRR TLGI+RIILE + L + I+ Sbjct: 456 SVADKMDTIAACFGVGLNPSGTADPFALRRQTLGILRIILEKSFRLSLCELIDKALPLLA 515 Query: 531 ----------DQNLILFFHDRLKLYLHDR-DIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ FF RL YL + DL+EA L D+ + V K L Sbjct: 516 DKLTVPPETARKDVLEFFRGRLLHYLVSQEGYAADLVEATLAVGIDDPVDAVARTKALVA 575 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ I+ E +L + P+ L E+ L+ +SD + Sbjct: 576 FKARPDFESLAAAFKRVANIIKEPE------TLPVEPELLQTAPEQALFGALSDTEGIVN 629 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 E++ Y + + + ++ FFD VLV D VR NRL+LL I+++ V + + Sbjct: 630 EALARSDYDAALEAMSRLRGFVDAFFDSVLVMDKDERVRRNRLALLTRIRDLFSGVADFR 689 Query: 700 KI 701 KI Sbjct: 690 KI 691 >gi|254372696|ref|ZP_04988185.1| hypothetical protein FTCG_00261 [Francisella tularensis subsp. novicida GA99-3549] gi|151570423|gb|EDN36077.1| hypothetical protein FTCG_00261 [Francisella novicida GA99-3549] Length = 694 Score = 580 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 208/727 (28%), Positives = 372/727 (51%), Gaps = 65/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRSLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVA--TPKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L + + + Sbjct: 124 SGQATVNLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLALYGND-----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENNYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSK-KPELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDF 634 +F++S K + + S KR+ IL+ K + + + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILS---KNATDKDYYYNIELAKAAANEYELALAYSIEEV 627 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + Sbjct: 628 APDLHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIG 687 Query: 695 VINVQKI 701 V ++ K+ Sbjct: 688 VADISKL 694 >gi|323143408|ref|ZP_08078093.1| glycine--tRNA ligase, beta subunit [Succinatimonas hippei YIT 12066] gi|322416813|gb|EFY07462.1| glycine--tRNA ligase, beta subunit [Succinatimonas hippei YIT 12066] Length = 688 Score = 580 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 211/709 (29%), Positives = 332/709 (46%), Gaps = 62/709 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 P + K A+ L + L + G+ + + + Y TP RL L +K L ++ E GP Sbjct: 16 PPKALRKLAQALHDDFVKHLNQAGLKFSSAQWYATPRRLALIIKDLETKQADREIEIKGP 75 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 V G KA G+ + G+ ++K D KG+ K ++ Sbjct: 76 AVKAAFDANGNPTKAAIGWATANGITVDQADRLKTD--KGEWLYIKSVKHGSDTATLIPQ 133 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + A+ +P PK M W ++RP+ ++ + K+I+ ++ + Sbjct: 134 MFKEALSALPIPKLMHWGDKKE-----EFVRPVHTLCMLF-----GNKLIEGNILGVSSS 183 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELVE 245 GHRF + V S D Y+ L++ V+ + + R+ +I + +LAS++ Sbjct: 184 KTIKGHRFMGQQTLTVDSADSYLSQLKDEGAVIANYDERKASIRSQVEKLASSINGVADL 243 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D LLEE+ LVE VF+ SF+ ++L +P E + T+K +QK F +G L F Sbjct: 244 DDALLEEVTSLVENPHVFLASFEDRFLKVPSEALVYTMKGDQKYFPIYDGQGKLLPKFAF 303 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 VSNI SD A++ GN RVV RL DA F+ D+ + L Sbjct: 304 VSNINPSDT-TALISGNERVVRPRLSDAEFFFNTDR--------------------KQSL 342 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTE 425 + RL+ +V+ IGT R + L IA LI+AD L +RA L+K DL T Sbjct: 343 ESFFPRLET--IVYQKDIGTIAYRSEIVGKLAAYIASLINADPQLCERAAHLAKCDLATT 400 Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EF + QG +G YA L E+ + +AI E PR + +PT + I VSLA+KL T Sbjct: 401 LVTEFTDTQGIMGMHYAELDGEDQNVAEAIFEQYLPRFAGDKIPTKPVQIAVSLAEKLTT 460 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------------- 531 LI + IN P G KDPY LRRA +G+IRI++ENK+D L I Sbjct: 461 LIGIFGINLLPKGDKDPYGLRRAAIGLIRIVIENKLDFDLVDVINQGCELLKDKFKADNT 520 Query: 532 -QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 +N+ + RLK Y D++I ++ A+L NLL IK + +F + Sbjct: 521 GKNVADYIFGRLKAYYQDQNIGGEIFAAVLSTHPTNLLDFDKRIKAVVKFKELPEATDLA 580 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + KR+ IL+ EK + EI L +AE +L ++ I E +H Y + Sbjct: 581 SAYKRVANILSKNEKHDGEIM----TNLLKEDAEIKLVDHLNHLLPVIDELYNHGDYERA 636 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 L + E ++ FF+ V+VNV+D +V+ NR+++LQ + + ++ Sbjct: 637 LTTLAELKEDVDGFFEHVMVNVEDPQVKANRIAILQKLNAVFSKTADIS 685 >gi|258405806|ref|YP_003198548.1| glycyl-tRNA synthetase, beta subunit [Desulfohalobium retbaense DSM 5692] gi|257798033|gb|ACV68970.1| glycyl-tRNA synthetase, beta subunit [Desulfohalobium retbaense DSM 5692] Length = 696 Score = 580 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 213/730 (29%), Positives = 336/730 (46%), Gaps = 65/730 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDF+ EI +EEIPAR + + L LL+E+ + + Y TP RL +Y L Sbjct: 1 MPDFVFEIGTEEIPARFLPRLRDQLVETTGRLLQEQELS-AEVTSYATPRRLVVYASQLP 59 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E GP V G KA GF +S G++ D + ++G Sbjct: 60 AKQPVREELVTGPPVAIAYDDNGEPTKAAQGFAKSQGVEV--DALFSEQTERGAYLAVRK 117 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++L + + + +PKSMRW S ++ RP++ +L +L +E Sbjct: 118 TVGGNDARELLPQLCQELLAALSFPKSMRW-----EASQATFARPVRWLLALLDSE---- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDA 232 I+ ++ + G T+GHR P +V Y L + V+LD R I +A Sbjct: 169 -IVPVEAVSLTAGRQTFGHRTMGAGPWEVPEAASYFEILRDKGRVILDVAERTRRIREEA 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ASA G + D+ LL E+ LVEW Q +G FD +L LP ++ +++++QK F Sbjct: 228 EAQASAHGGRVAWDESLLGEVADLVEWPQAVLGGFDASFLELPRAVLLTSMQSHQKSFGV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L F+ N+ D + +G RV+ ARLEDA FW+ D Sbjct: 288 ENDAGELLPYFVCTLNLVPQD-LDLVRKGWERVLRARLEDARFFWQVD------------ 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-V 411 L + +LD V+F +G+ G++ R+ L ++A + + A Sbjct: 335 --------GKASLTTWLDQLD--KVIFLGPLGSMGDKARRLEGLAGEMAARVAPEAADSA 384 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L+K DL +E+V EF ELQG +G Y+ + E S A+ EH P GP VP+N Sbjct: 385 QRAGRLAKTDLVSEMVGEFAELQGFMGGVYSRQKGETASVAQAVAEHYLPTGPESAVPSN 444 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 V+LADK DTL+ + ++ PSG+ DPYALRR LGIIRI+LE + L Sbjct: 445 AEGAVVALADKADTLVGCFGLDMVPSGANDPYALRRQALGIIRILLEYGWRLSLRDLLSW 504 Query: 529 ----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + + L FF RLK Y R +++A L D++ + Sbjct: 505 AQQAYAKDVQWKSEPGVALETLETFFGHRLKAYFQGRGYGTKIVDAALGAGWDDVPALAQ 564 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK-NREISLEISPQYLLLEAEKRLYAVI 631 + L+ F + E+ +L+ KR I+ + + + ++ S L E EK L A + Sbjct: 565 RLDALHGFAAEEDFEQAVLTFKRADNIIRKQGTQIDGDLDGGYSATALQEEQEKTLAAAL 624 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 D + + + + LL + ++ FFD V+V DD E+R NRL+LL+ + + Sbjct: 625 EDLAPRWAALWEQEAFDDLFGLLRELRPAVDGFFDHVMVMCDDPELRHNRLNLLKALTDR 684 Query: 692 ILIVINVQKI 701 + ++ + K+ Sbjct: 685 LSLLADFSKL 694 >gi|238022199|ref|ZP_04602625.1| hypothetical protein GCWU000324_02106 [Kingella oralis ATCC 51147] gi|237866813|gb|EEP67855.1| hypothetical protein GCWU000324_02106 [Kingella oralis ATCC 51147] Length = 686 Score = 579 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 207/710 (29%), Positives = 347/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I + Y +P RL + + + P ++ R Sbjct: 15 PPKALNNLGNHFAQSIAEGLEKAQLIDGTTQYTAYASPRRLAVSVANVKPVQADQHVVRK 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 G V G KA++GF RS G++ S I K DVY + + + +L Sbjct: 75 GVSVAAGMKDGVPTKALEGFARSCGVEIGSLKIIH--DGKQDVYAHEFTQAGQTLAALLG 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ AI+K+P PK MRW + S +++RP+ ++ + A+ ++ +++ + Sbjct: 133 EIINTAIKKLPIPKVMRWGS-----STHTFVRPVHGLVVLHGAD-----VVPVNVLGLDS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 G T GHRF + I + D Y + + E V+ RR AI + +++ ++ + Sbjct: 183 GRQTLGHRFLSQGEIVLAQADDYAQQIAEQGKVIASFAKRRAAIKAELDKVSGSLNARVA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D LL+E+ LVE+ V F+ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 243 ADDALLDEVTALVEYPVVLQAEFEAHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I+ GN RV+ ARL DA F+K+DQ Sbjct: 303 LVSNLQTAD-PSHIIHGNERVLRARLSDAEFFYKQDQ--------------------KAT 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L+ VV+H KIG+Q +R+ R++ + IA+ + D A +RA L+KADL T Sbjct: 342 LESRLPKLE--HVVYHNKIGSQAQRIDRLQTIAAHIAEQLGTDRATAERAARLAKADLVT 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YAVL E AIE+H +PR + +P + I+ V+LADKL+ Sbjct: 400 EMVGEFPELQGTMGKYYAVLDGEQPEIAAAIEQHYQPRFAGDKLPESPIATAVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI-------------PLSQFIED 531 TL+ W I P+G KDPYALRRA LG++R+++ + + I L Sbjct: 460 TLVGIWGIGLIPTGDKDPYALRRAALGVLRMLMNSPLSINDLLTTVAAQFPRDLLAANTV 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 + F RL + L D D + A+L D L + D ++ + F + Sbjct: 520 TEVADFMQARLAVLLQ-NDYAQDTVAAVLAQRPDRLDDLADKLQAVESFKKLPEAAALAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + + L +AE+ L+A +Q ++ + Sbjct: 579 ANKRVQNLLKKADAQ----LGAVQENLLQEDAERALFAATQALRPTVQAALAKHDFQAAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ ++ FFD V+V DD V+ NRL+LL + ++ V ++ + Sbjct: 635 TALAAVKPQVDAFFDNVMVMADDAAVKQNRLNLLNELSQLMNAVADISLL 684 >gi|294651684|ref|ZP_06728986.1| glycyl-tRNA synthetase subunit beta [Acinetobacter haemolyticus ATCC 19194] gi|292822403|gb|EFF81304.1| glycyl-tRNA synthetase subunit beta [Acinetobacter haemolyticus ATCC 19194] Length = 689 Score = 579 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 201/721 (27%), Positives = 352/721 (48%), Gaps = 62/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 L E+ EE+P + + L LK+ G+ + + Y P RL L + + Sbjct: 4 HTVLFELGCEELPPKSLKTLRDALKAETEKGLKDAGLNFAAIEAYAAPRRLALKIVDIDA 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + GP V G KA++GF+R G+ + K + + Sbjct: 64 AQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCFLKD 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + + Sbjct: 122 VKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----KDNQ 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I + + Sbjct: 172 VVEATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQDQVKK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 232 LADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLIN 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI +SNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 292 AEGKLQPYFITISNIESKDPIQ-IIEGNEKVVRPRLSDAEFFFLQDQ------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R +L ++VF A++GT + RI L ++ + A+ A ++A Sbjct: 338 -------KQPLASRKEKL--ANMVFQAQLGTLWNKSERIAKLAVALSPITGANAADAEKA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL +E+V EFPELQG G YA L+ E+ +A+ E P+ + +P K Sbjct: 389 ALLAKCDLTSELVGEFPELQGIAGTYYARLEGESHEVAEALGEQYLPKFAGDVLPQTKTG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 449 TTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNFALQ 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + + F R + D+ + D+I+A+ + L + +N Sbjct: 509 GYGDVVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVIQAVQALAPKSPLDFDKRVTAVN 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA E + L+ AEK LYA +S + Sbjct: 569 HFRTLPEAAALAAANKRVANILAKEATPE----GAVVEANLVEAAEKALYAELSALTPVV 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q + + Y + L ++ PI+ FF+ V+V DD E++ NRL LL ++++ + +V Sbjct: 625 QPLLAARNYTEALSKLAALRAPIDAFFEGVMVMADDAELKANRLRLLAQLRDLFTAIADV 684 Query: 699 Q 699 Sbjct: 685 S 685 >gi|212211691|ref|YP_002302627.1| glycyl-tRNA synthetase subunit beta [Coxiella burnetii CbuG_Q212] gi|212010101|gb|ACJ17482.1| glycyl-tRNA synthetase beta chain [Coxiella burnetii CbuG_Q212] Length = 692 Score = 579 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 219/722 (30%), Positives = 360/722 (49%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 8 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 67 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 68 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 125 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 126 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR + D + Sbjct: 176 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRRE-KIRDLIQ 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A++ E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 235 KAASEKGEAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIKN 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ ++ GN RV+ ARL DA F+ D Sbjct: 295 KNGDLLPYFIIVSNIESK-NPKRVIVGNERVINARLADASFFYDND-------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ + D L RA Sbjct: 340 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQTNIDEQLAARA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G A E +AI+EH PR + +P N +S Sbjct: 392 GLLSKCDLVSEMVYEFPTLQGIMGYYCAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 452 ACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 511 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L + L IK + Sbjct: 512 NYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQH 571 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 572 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 629 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 630 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 689 Query: 700 KI 701 + Sbjct: 690 LL 691 >gi|308174314|ref|YP_003921019.1| glycyl-tRNA synthetase subunit beta [Bacillus amyloliquefaciens DSM 7] gi|307607178|emb|CBI43549.1| glycyl-tRNA synthetase (beta subunit) [Bacillus amyloliquefaciens DSM 7] Length = 679 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 213/720 (29%), Positives = 346/720 (48%), Gaps = 61/720 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR H + L L G L E+ + + ++ + TP RL +Y+K Sbjct: 1 MSKQDLLLEIGLEEMPARFLHDSMVQLGEKLTGWLAEKNIAHGEVKLFNTPRRLAVYIKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G KD + Sbjct: 61 VAEKQADIQEEAKGPAKKIALDADGNWTKAAIGFSKGQGAGVDD--LYIKDVNGTEYVFV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +L + I + +PK+MRW T +IRP+K I + + Sbjct: 119 QKFQAGQETKTLLPQ-LENLITGMHFPKNMRWGTQD-----LRYIRPIKWIAVLFGKD-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I ++ + G T GHRF + + + Y L+E V+ DP+ R+ I + Sbjct: 171 ---VIPFEITNVGTGRNTQGHRFLG-EEVSIDAPSSYEELLKEQHVIADPKVRKQMIQSQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + D+DLL E+ LVE+ GSF+ ++L LPEE++ T+K +Q+ F Sbjct: 227 LDALAADKKWNIPIDEDLLNEVNQLVEYPTALYGSFESEFLSLPEEVLVTTMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 287 VKDENGNLLPHFITVRNG-NSHAIENVARGNEKVLRARLSDAAFFYKEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 +D + +L+ ++VFH ++G+ G++V R + K+A + AD Sbjct: 338 ------------NIDANVKKLE--NIVFHEELGSLGDKVRRAAAIAGKLAVRLKADEQTQ 383 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR +V Sbjct: 384 KLVKRAAEISKFDLVTHMIYEFPELQGVMGEKYARMLGEDEAVAAAVNEHYMPRAAGGDV 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID------ 522 P+ V+LADKLDT+ +F++I+ P+GS+DPY LRR GI+ I+++ Sbjct: 444 PSTFTGAVVALADKLDTIASFFSIDVIPTGSQDPYGLRRQASGIVSILIDRNWGISFKEL 503 Query: 523 IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + L++ ++ L+ FF RLK L+ DIRHD+IEA+L + V + L + Sbjct: 504 LSLTETEKENELLDFFTQRLKYVLNAEDIRHDVIEAVLDSTDLEPYAAVHKARVLEKHLG 563 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + ++ + R+ I E ++ I P E EK+L+ + ES Sbjct: 564 TPGFKETAEALGRVISISKKGESRD------IKPDLFENEQEKKLFDAYQKTKDSVAESF 617 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y Q L + EPIE +F+ +VN D+ ++ NRL+ + + ++I N+ ++ Sbjct: 618 ASKNYEQALTALSGLKEPIEDYFNHTMVNADNEALKTNRLAQMTALADVIKSFANMNHLI 677 >gi|91791377|ref|YP_561028.1| glycyl-tRNA synthetase subunit beta [Shewanella denitrificans OS217] gi|123061408|sp|Q12TC1|SYGB_SHEDO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|91713379|gb|ABE53305.1| Glycine--tRNA ligase [Shewanella denitrificans OS217] Length = 694 Score = 578 bits (1490), Expect = e-162, Method: Composition-based stats. Identities = 213/727 (29%), Positives = 337/727 (46%), Gaps = 66/727 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + A+ L + + + Y P RL L + GL+ Sbjct: 5 NLLIEIGTEELPPKSLRTLADSFLANFSDELVKADLPFTAATWYAAPRRLALSITGLAVA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDADGNPTKAAQGWARGNGITVEQAERLVTD--KGEWLVHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++ + A+ K+P PK MRW ++ +IRP+ ++ +L +E Sbjct: 123 VGVQTNSLIAAMAQRALDKLPIPKPMRWGA-----NSTQFIRPVHTVTMLLGSELIGG-- 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 +L I I GHRF ++ D+Y+ L+E VL D + R+ I DA Sbjct: 176 ---ELLGIKSDRIIRGHRFMGQASFQLDHADNYLSALKEQGKVLADYQLRKAIIKADAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G +DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGVADIQEDLLEEVASLVEWPIVLTASFEEKFLNVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 KSGKLLPNFIFVTNIESKD-PQQIISGNEKVVRPRLADAEFFFNTDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-----ADVA 409 L R++ L+ VVF ++GT R RI L IA ++ + Sbjct: 339 -------KHSLASRLSSLET--VVFQKQLGTLKARAERISQLAGFIATELNNNNLASSSV 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSKADL T +V EF + QG +G YA L E + AIEE KP+ + VP Sbjct: 390 DAARAGLLSKADLMTNMVMEFTDTQGTMGMHYARLDGETEAVAIAIEEQYKPKFSGDTVP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 T +S V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+RII+ENK+ + L I Sbjct: 450 TASVSCAVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRIIVENKLPLDLVDLI 509 Query: 530 ED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++++ F R + + D+ I+ D+I A+L + Sbjct: 510 AKAQALHGTNLTNGNTSEDVLEFLMARFRSWYQDKGIQVDVILAVLARRPTRPADFDSRV 569 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 ++ F + KR+ ILA K E+ ++P L AEK L ++ Sbjct: 570 NAVSHFRGLEASTALAAANKRVSNILA---KVEGELPANVTPSLLTETAEKALAEQLASL 626 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L Sbjct: 627 QPKLAPLFATGDYQQALTLLAELRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLH 686 Query: 695 VINVQKI 701 V ++ + Sbjct: 687 VADISLL 693 >gi|328554260|gb|AEB24752.1| glycyl-tRNA synthetase subunit beta [Bacillus amyloliquefaciens TA208] gi|328912657|gb|AEB64253.1| glycyl-tRNA synthetase (beta subunit) [Bacillus amyloliquefaciens LL3] Length = 679 Score = 578 bits (1490), Expect = e-162, Method: Composition-based stats. Identities = 213/720 (29%), Positives = 346/720 (48%), Gaps = 61/720 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR H + L L G L E+ + + ++ + TP RL +Y+K Sbjct: 1 MSKQDLLLEIGLEEMPARFLHDSMVQLGEKLTGWLAEKNIAHGEVKLFNTPRRLAVYIKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G KD + Sbjct: 61 VAEKQADIQEEAKGPAKKIALDADGNWTKAAIGFSKGQGAGVDD--LYIKDVNGTEYVFV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +L + I + +PK+MRW T +IRP+K I + + Sbjct: 119 QKFQAGQETKTLLPQ-LENLITGMHFPKNMRWGTQD-----LRYIRPIKWIAALFGKD-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I ++ + G T GHRF + + + Y L+E V+ DP+ R+ I + Sbjct: 171 ---VIPFEITNVGTGRNTQGHRFLG-EEVSIDAPSSYEELLKEQHVIADPKVRKQMIQSQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + D+DLL E+ LVE+ GSF+ ++L LPEE++ T+K +Q+ F Sbjct: 227 LDALAADKKWNIPIDEDLLNEVNQLVEYPTALYGSFESEFLSLPEEVLVTTMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 287 VKDENGNLLPHFITVRNG-NSHAIENVARGNEKVLRARLSDAAFFYKEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 +D + +L+ ++VFH ++G+ G++V R + K+A + AD Sbjct: 338 ------------NIDANVKKLE--NIVFHEELGSLGDKVRRAAAIAGKLAVRLKADEQTQ 383 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR +V Sbjct: 384 KLVKRAAEISKFDLVTHMIYEFPELQGVMGEKYARMLGEDEAVAAAVNEHYMPRAAGGDV 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID------ 522 P+ V+LADKLDT+ +F++I+ P+GS+DPY LRR GI+ I+++ Sbjct: 444 PSTFTGAVVALADKLDTIASFFSIDVIPTGSQDPYGLRRQASGIVSILIDRNWGISFKEL 503 Query: 523 IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + L++ ++ L+ FF RLK L+ DIRHD+IEA+L + V + L + Sbjct: 504 LSLTETEKENELLDFFTQRLKYVLNAEDIRHDVIEAVLDSTDLEPYAAVHKARVLEKHLG 563 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + ++ + R+ I E ++ I P E EK+L+ + ES Sbjct: 564 TPGFKETAEALGRVISISKKGESRD------IKPDLFENEQEKKLFDAYQKTKDSVAESF 617 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y Q L + EPIE +F+ +VN D+ ++ NRL+ + + ++I N+ ++ Sbjct: 618 ASKNYEQALTALSGLKEPIEDYFNHTMVNADNEALKTNRLAQMTALADVIKSFANMNHLI 677 >gi|284049109|ref|YP_003399448.1| glycyl-tRNA synthetase, beta subunit [Acidaminococcus fermentans DSM 20731] gi|283953330|gb|ADB48133.1| glycyl-tRNA synthetase, beta subunit [Acidaminococcus fermentans DSM 20731] Length = 686 Score = 578 bits (1490), Expect = e-162, Method: Composition-based stats. Identities = 199/728 (27%), Positives = 329/728 (45%), Gaps = 70/728 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L EI +EE+PA+ ++ + L E + + ++ Y TP R+ +G++ Sbjct: 1 MANLLYEIGTEEMPAQYMPGILKEYRELAGKKLAEARIPFSTVKVYGTPRRMAFLAEGVA 60 Query: 61 PHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E GP + G +A GF R G+ Q K AV Sbjct: 61 EKQEDSNVESKGPSLKIAFDKDGNATRAAQGFARGQGVDVKDLVQ------KDGYVYAVK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + D+L I+ + + +PK+MRW+ F ++RP + ++ +L + Sbjct: 115 HLEGKKTIDLLPAILDDILHSLNFPKTMRWADYD-----FGFVRPFRWMVALL-----DD 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I ++ ++ G GHRF + H I + Y + +E+ V++D + RR I Sbjct: 165 QMIPVEANDVKSGREARGHRFLSNHLITIPDAAAYEKTMEDNFVMVDVDKRRETIRKQIE 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA A G + DLLEE+ LVE+ G D KYL LP+ I ++ +Q+ F Sbjct: 225 DLAVAEGGKAAISPDLLEEVTFLVEYPTALCGHIDDKYLRLPDCAIITPMRDHQRYFPMF 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI V N + + GN RV+ ARL+DA+ F+ D+ Sbjct: 285 DKDGKLMPKFITVRNGG-KEHLDIVTHGNERVLRARLDDAVFFFDNDR------------ 331 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR--VLGKKIAQLIDADVALV 411 K L Q L +V F +G ++ R++ A ++AD V Sbjct: 332 --------KKSLAQHREGL--HEVAFQHGLGNMYDKTERLQKLCDVLVKATGLEADAKAV 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA +LSKADL T +V EF ELQG +GKEYA+L NE AI E PR + +P + Sbjct: 382 ERAALLSKADLVTGMVTEFTELQGTMGKEYALLDNEGEKVAQAIGEQYMPRFAGDELPQS 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +++ADKLD ++ ++ P+GS+DPYALRR LGI+ I+ + + PL + + Sbjct: 442 NEGRILAVADKLDNIVATFSRGMAPTGSQDPYALRRQALGILNIVADGDVHFPLRAVLAE 501 Query: 532 ----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLI 574 + FF R K L D+ +R+D+++A+L P D+L I Sbjct: 502 TLKNLPVEVENEARLLDEVADFFAQRAKNMLLDKGVRYDVVDAVLAAPGLDDLADIFVRA 561 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 L+ + + K + + R+ I KN + + AEK LY + Sbjct: 562 DALSAYLETEKAADSIQAFTRVENI-----SKNNVVEAPVDAALFQDAAEKALYEAVEKV 616 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++Y + + P+ FFD V+V D +V++NRL+LL +K + Sbjct: 617 AAASAPLAADRKYADLLAANDELAAPVNAFFDAVMVMDKDEKVKNNRLALLNQVKKQVNQ 676 Query: 695 VINVQKIV 702 V ++ ++V Sbjct: 677 VADLSQLV 684 >gi|134093652|ref|YP_001098727.1| glycine tRNA synthetase subunit beta [Herminiimonas arsenicoxydans] gi|133737555|emb|CAL60598.1| glycine tRNA synthetase, beta subunit (Glycine--tRNA ligase beta chain) (GlyRS) [Herminiimonas arsenicoxydans] Length = 708 Score = 578 bits (1490), Expect = e-162, Method: Composition-based stats. Identities = 216/727 (29%), Positives = 365/727 (50%), Gaps = 59/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K + + +L LK +G++ + + Q+ +P RL ++L + Sbjct: 12 KNLLIELFVEELPPKALKKIGDAFAQLLQASLKTQGLLSTDSVLTQFASPRRLGVHLTQV 71 Query: 60 SPHSPEKIE-ERLGPR------VGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLA 111 + + +K ++L P G A+ L + G + +K++ K +V Sbjct: 72 AEQADDKQVMQKLMPASVGLTADGKATPALLKKLSALGANESAVAGLKRESDGKAEVLFF 131 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + D L+ + + K+P PK M + +++RP ++ + A+ Sbjct: 132 NSIVTGVTLADGLQKALEETLAKLPIPKVMGYQLADG-WETVNFVRPAHGLVALHGAD-- 188 Query: 172 KEKIIDLDLKEIPCGNITYGHRFH-APHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAIL 229 +I++ + GN T GHRF P+ ++ D Y + + V+ RR I+ Sbjct: 189 ---VINVSALGLTAGNTTRGHRFEAGLDPVYIRDADSYAKQIATEGAVIASFAERRAEIV 245 Query: 230 NDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 AS G L +ED+DLL+E+ GLVE V +G F++ +L +P+E + LT+K NQ Sbjct: 246 RQLAAAASEAGDNLTPIEDEDLLDEVTGLVERPNVLIGQFEETFLAVPQECLILTMKANQ 305 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 K F +G L+N F++VSNI+ +D + ++ GN RVV RL DA F+ +D+ Sbjct: 306 KYFPLLDSKGNLSNKFLIVSNIRPADA-SLVIGGNERVVRPRLADAKFFFDQDR------ 358 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 K L R+A LD VV+H K+GTQGER++R+R + + IA + D Sbjct: 359 --------------KKTLASRVAGLD--KVVYHNKLGTQGERIARVRAIAQAIAAKLGID 402 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 V D A L+KADL T++V EFPELQG +G+ YA+ + DAIE+H KPR + Sbjct: 403 VQQADTAAQLAKADLLTDMVGEFPELQGIMGRYYALHDGLAENVADAIEDHYKPRFAGDT 462 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P N + + V+LADKL+TL+ ++I + P+G KDP+ALRR LG+IR+++E K+DI +++ Sbjct: 463 LPRNPVGMVVALADKLETLVGLFSIGQIPTGDKDPFALRRHALGVIRMLIEGKLDIGINE 522 Query: 528 FIEDQN-------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 I LI F DRL L ++ I+A+L + L + + Sbjct: 523 LIAAAEQPFNKLAIEHRDALITFIFDRLANALREQGYSAQEIDAVLALQPQKLADVASRL 582 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + F + + KR+ IL K E++ ++ P L AE L ++ Sbjct: 583 AAVRAFAVLPEAPALAAANKRVGNILK---KVEGEVTAKVDPALLKEAAEIALNQTLTTV 639 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + Y +L ++ P++ FF+ V+VN DD +R+NRL LL + + + Sbjct: 640 KPQADTAFARGDYAASLQVLAALKTPVDAFFESVMVNADDAALRNNRLGLLATLHHAMNQ 699 Query: 695 VINVQKI 701 V ++ K+ Sbjct: 700 VADISKL 706 >gi|218708120|ref|YP_002415741.1| glycyl-tRNA synthetase subunit beta [Vibrio splendidus LGP32] gi|254781871|sp|B7VGK6|SYGB_VIBSL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218321139|emb|CAV17089.1| Glycyl-tRNA synthetase beta chain [Vibrio splendidus LGP32] Length = 688 Score = 578 bits (1490), Expect = e-162, Method: Composition-based stats. Identities = 204/703 (29%), Positives = 332/703 (47%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKNFLIELGTEELPPTALRSLAEAFASNFEAGLKTAELSHEGIKWYAAPRRLALKVTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP + G KA G+ R G+ ++K D KG+ L Sbjct: 61 AEGQADKVVEKRGPAISVAFDAEGNATKAAQGWARGNGITVEQADRLKTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++++ I A+ +P PK+MRW + +IRP+K++ +L Sbjct: 119 QEVAGKPVQELVMDIAAKALAGLPIPKAMRWGNSD-----IQFIRPVKTLTVLL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +++++ + + GHRF + S D Y LE V+ D + R+ IL D Sbjct: 169 DELVEGKILGVASARTIRGHRFMGEQEFTIDSADQYPAILEERGKVMADYDARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A AVG + DL+EE+ LVEW V F++ +L +P E + T+K +QK F Sbjct: 229 AKKAADAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEQVFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDADKNLLPNFIFVSNIESKE-PRHVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+A LD +F ++GT ++ RI L IA+ IDADV Sbjct: 338 ----------KRPLIDRLAELDQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDTLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIGK 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++I F R + + D D+I+A+L +K Sbjct: 505 AKELLGDKLTNENVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELPAEIDLALLQEDAEKALAENVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|254374154|ref|ZP_04989636.1| glycyl-tRNA synthetase beta subunit [Francisella novicida GA99-3548] gi|151571874|gb|EDN37528.1| glycyl-tRNA synthetase beta subunit [Francisella novicida GA99-3548] Length = 694 Score = 578 bits (1489), Expect = e-162, Method: Composition-based stats. Identities = 208/727 (28%), Positives = 372/727 (51%), Gaps = 65/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELEKVA--TPKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L + + + Sbjct: 124 SGQATVNLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLALYGND-----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSK-KPELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQRLAELGNFDSQQAYRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDF 634 +F++S K + + S KR+ IL+ K + + + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILS---KNATDKDYYYNIELAKATANEYELALAYSIEEV 627 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + Sbjct: 628 APDLHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIG 687 Query: 695 VINVQKI 701 V ++ K+ Sbjct: 688 VADISKL 694 >gi|118497331|ref|YP_898381.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. novicida U112] gi|195536017|ref|ZP_03079024.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. novicida FTE] gi|118423237|gb|ABK89627.1| glycyl-tRNA synthetase beta subunit [Francisella novicida U112] gi|194372494|gb|EDX27205.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. novicida FTE] Length = 694 Score = 578 bits (1489), Expect = e-162, Method: Composition-based stats. Identities = 207/727 (28%), Positives = 372/727 (51%), Gaps = 65/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVA--TPKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L + + + Sbjct: 124 SGQATVNLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLALYGND-----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +++++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VNIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSK-KPELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDF 634 +F++S K + + S KR+ IL+ K + + + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILS---KNATDKDYYYNIELAKAAANEYELALAYSIEEV 627 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + Sbjct: 628 APDLHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIG 687 Query: 695 VINVQKI 701 V ++ K+ Sbjct: 688 VADISKL 694 >gi|328675923|gb|AEB28598.1| Glycyl-tRNA synthetase beta chain [Francisella cf. novicida 3523] Length = 694 Score = 578 bits (1489), Expect = e-162, Method: Composition-based stats. Identities = 208/727 (28%), Positives = 364/727 (50%), Gaps = 65/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + AE L + LKE V + N + + +P RL +K L+ Sbjct: 6 KDFLFELGTEELPPKALRSLAESLLASVESQLKEAKVSFGNTKWFASPRRLSFIIKDLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G + GF +S G++ + KGD + Sbjct: 66 AQEDIVVEKQGPLVSIAYKDGEPTQVGLGFAKSCGVKFDELESVA--TPKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L+ I+ A++++P PK MRW S ++RP+ IL + + + Sbjct: 124 SGQATVSLLQEIIIKALKQLPIPKMMRWGD-----SNVEFVRPVHWILALYGND-----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKATNITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAKDI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +++ D DL+EE+ +VE+ + F+K +L +P+E + ++ +QKCF + Sbjct: 234 AKENNYQVILDDDLVEEVCAIVEYPNAMLCDFNKDFLRVPQEALISAMEEHQKCFALLDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 EGDLVAHFITISNIQSK-KPELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L PL+Q + +L+ V F +K+G ++ RI +++A+L + D RA Sbjct: 338 -----LKTPLEQLLPKLEY--VTFQSKLGNMYQKAQRIANTAQQLAELGNFDSQQAYRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPKTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILKDTSVDISLEKIIDISLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI ++ ++ + Sbjct: 511 YKKVNNLEFSADIKSEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYHSVKDFAVRVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDF 634 +F++S K + + S KR+ IL+ K + + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILS---KNATDKVYCYDIELAKAVANEYELALAYSIEEV 627 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 +++ ++++ Y +LL + + I FF+ V+V +D +R+NRL+LL + + + Sbjct: 628 APDLEKYINNREYGYALELLTCLDKVISEFFENVMVIDEDVNIRENRLALLVNLHKMFIG 687 Query: 695 VINVQKI 701 + ++ K+ Sbjct: 688 IADISKL 694 >gi|208779118|ref|ZP_03246464.1| glycyl-tRNA synthetase, beta subunit [Francisella novicida FTG] gi|208744918|gb|EDZ91216.1| glycyl-tRNA synthetase, beta subunit [Francisella novicida FTG] Length = 694 Score = 578 bits (1489), Expect = e-162, Method: Composition-based stats. Identities = 207/727 (28%), Positives = 371/727 (51%), Gaps = 65/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVA--TPKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L + + + Sbjct: 124 SGQATVNLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLALYGND-----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +++++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VNIEILGHKAANITYGHRFHHPQSIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSK-KPELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLENIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDF 634 +F++S K + + S KR+ IL+ K + + + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILS---KNATDKDYYYNIELAKAAANEYELALAYSIEEV 627 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + Sbjct: 628 APDLHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIG 687 Query: 695 VINVQKI 701 V ++ K+ Sbjct: 688 VADISKL 694 >gi|226953821|ref|ZP_03824285.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter sp. ATCC 27244] gi|226835412|gb|EEH67795.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter sp. ATCC 27244] Length = 689 Score = 577 bits (1488), Expect = e-162, Method: Composition-based stats. Identities = 203/721 (28%), Positives = 351/721 (48%), Gaps = 62/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 L E+ EE+P + + L LK+ G+ + + Y P RL L + + Sbjct: 4 HTVLFELGCEELPPKSLKTLRDALKAETEKGLKDAGLNFAAIEAYAAPRRLALKIVDIDA 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + GP V G KA++GF+R G+ + K + + Sbjct: 64 AQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCFLKD 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + ++ Sbjct: 122 VKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----KDDQ 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I + + Sbjct: 172 VVEASIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQDQVKK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 232 LADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLIN 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI +SNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 292 AEGKLQPYFITISNIESKDPIQ-IIEGNEKVVRPRLSDAEFFFLQDQ------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R +L ++VF A++GT + RI L ++ + A+ A ++A Sbjct: 338 -------KQPLASRKEKL--ANMVFQAQLGTLWNKSERIAKLAVALSPITGANAADAEKA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL +E+V EFPELQG G YA L+ EN +A+ E P+ + +P K Sbjct: 389 ALLAKCDLTSELVGEFPELQGIAGTYYARLEGENHEVAEALGEQYLPKFAGDVLPQTKTG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN +D+ + + + Sbjct: 449 TTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENILDVTIEELVNFALQ 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + + F R + D+ + D+I+A+ + L + +N Sbjct: 509 GYGDVVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVIQAVQALAPKSPLDFDKRVTAVN 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA E + L+ AEK LYA +S + Sbjct: 569 HFRTLPEAAALAAANKRVANILAKEATPE----GAVVEANLVEAAEKALYAELSALTPVV 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q + + Y + L ++ PI+ FF+ V+V DD E++ NRL LL ++ + V +V Sbjct: 625 QPLLAARNYTEALSKLAALRAPIDAFFEGVMVMADDAELKANRLRLLAQLRGLFTAVADV 684 Query: 699 Q 699 Sbjct: 685 S 685 >gi|86147197|ref|ZP_01065513.1| glycyl-tRNA synthetase beta subunit [Vibrio sp. MED222] gi|85835081|gb|EAQ53223.1| glycyl-tRNA synthetase beta subunit [Vibrio sp. MED222] Length = 688 Score = 577 bits (1487), Expect = e-162, Method: Composition-based stats. Identities = 203/703 (28%), Positives = 334/703 (47%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKNFLIELGTEELPPTALRSLAEAFASNFEAGLKTAELSHEGIKWYAAPRRLALKVTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP + G KA G+ R G+ ++K D KG+ L Sbjct: 61 AEGQADKVVEKRGPAISVAFDAEGNATKAAQGWARGNGITVEQADRLKTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++++ I A+ +P PK+MRW + +IRP+K++ +L Sbjct: 119 QEVAGKPVQELVMDIAAKALAGLPIPKAMRWGNSD-----IQFIRPVKTLTVLL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +++++ ++ + GHRF + S D Y LE V+ D + R+ IL D Sbjct: 169 DELVEGEILGVASARTIRGHRFMGEQEFTIDSADQYPAILEERGKVMADYDARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AKKAADAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEQEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDADKNLLPNFIFVSNIESKE-PRHVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+A LD +F ++GT ++ RI L IA+ IDADV Sbjct: 338 ----------KRPLIDRLAELDQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDTLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIGK 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++I F R + + D D+I+A+L +K Sbjct: 505 AKELLGDKLTNENVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E+ EI L +AE+ L + Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELPAEIDLALLQEDAERALAENVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|328676816|gb|AEB27686.1| Glycyl-tRNA synthetase beta chain [Francisella cf. novicida Fx1] Length = 694 Score = 577 bits (1487), Expect = e-162, Method: Composition-based stats. Identities = 208/727 (28%), Positives = 371/727 (51%), Gaps = 65/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELEKVA--TPKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L + + + Sbjct: 124 SGQATVNLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLALYGND-----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSK-KPELVKSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLENIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDF 634 +F++S K + + S KR+ IL+ K + + + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILS---KNATDKDYYYNIELAKAAANEYELALAYSIEEV 627 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + Sbjct: 628 APDLHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIG 687 Query: 695 VINVQKI 701 V ++ K+ Sbjct: 688 VADISKL 694 >gi|289209733|ref|YP_003461799.1| glycyl-tRNA synthetase subunit beta [Thioalkalivibrio sp. K90mix] gi|288945364|gb|ADC73063.1| glycyl-tRNA synthetase, beta subunit [Thioalkalivibrio sp. K90mix] Length = 693 Score = 577 bits (1487), Expect = e-162, Method: Composition-based stats. Identities = 202/703 (28%), Positives = 352/703 (50%), Gaps = 65/703 (9%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M + L+E+ +EE+P + + L+ L L+E G+ + TP RL + Sbjct: 1 MAEARELLIELGTEELPPTALARLRDALAEGLTTRLREAGLEPGEPETFATPRRLAVLFP 60 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 + P++++ER GP V G KA+ GF RS G++ ++ KG+ + Sbjct: 61 DIPGQQPDQLQERRGPAVAAAFDDAGEPTKAVLGFARSCGVEVERLE--RETTDKGEYLV 118 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 +P R + ++L ++ A++ +P PK MRW ++ + ++RP ++ + Sbjct: 119 FRQLQPGRPLGELLPDMLAAALEALPTPKRMRWGSSRT-----EFVRPAHWLVVL----- 168 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAIL 229 +++++ + E G T+GHRFH P ++++ + Y L V E RR IL Sbjct: 169 HGTEVLEMTVLEQTAGRATHGHRFHQPGALELKRGNDYAERLRSPGFVEPSFEARRERIL 228 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 H A A+G + D DLL E+ LVEW G FD ++L +P+E + T++ NQK Sbjct: 229 EQVHEQAQALGGRALVDADLLAEVTALVEWPVALTGGFDPRFLEVPQEALISTMQDNQKY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G + FI++SNI++ D A+ GN RV+ R DA FW++D+ Sbjct: 289 FPVVDEAGRMQPHFIVISNIESRD-PHAVRDGNERVLRPRFADAEFFWQQDR-------- 339 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K L++R+ LD VVF ++GT ++ R+ L +++A L+ D Sbjct: 340 ------------KKRLEERLDALD--SVVFEKRLGTLRDKSVRLEALMQRLAVLMGLDAN 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 L RA L+K DL T++V EF ELQG +G+ YA+ E+ + AIE+H PR +P Sbjct: 386 LAARAARLAKCDLVTQMVFEFTELQGTMGRYYALHDREDETVAAAIEQHYWPRQSGSELP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 ++ ++LAD+LDTL+ +AI ++P+G+KDP+ALRRA LG++RI++E ++ + L+ + Sbjct: 446 DAPLAQALALADRLDTLVGIFAIGKQPTGTKDPFALRRAALGLVRILVERELPLALTPLL 505 Query: 530 EDQN----------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + + +RL+ YL ++ H+ IEA+ D L V Sbjct: 506 QAAAEPIRERVPEADQAVEPVRDYILERLRGYLLEQGQAHETIEAVAAVAPDTPLDFVHR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ ++ F + E + KRI +L K E ++ P+ L L+ E++LY + Sbjct: 566 VRAVSLFRERPEAEALAAANKRIHNLLR---KAGEEAEADLDPEALALDEERQLYQGLQA 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 +++++ Y L + + ++ FFDQV+V +D Sbjct: 623 VRPGVEQAVADGDYLHALGELAGLRDRVDTFFDQVMVMAEDAA 665 >gi|121998011|ref|YP_001002798.1| glycine--tRNA ligase [Halorhodospira halophila SL1] gi|121589416|gb|ABM61996.1| glycyl-tRNA synthetase beta chain [Halorhodospira halophila SL1] Length = 696 Score = 576 bits (1486), Expect = e-162, Method: Composition-based stats. Identities = 208/738 (28%), Positives = 337/738 (45%), Gaps = 81/738 (10%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M + L+EI +EE+P + + L L+E+ + ++ + TP RL + + Sbjct: 1 MAERRPLLIEIGTEELPPKALQRLMIAFRNDLASALEEQRLQPVGVQAFATPRRLAVRFE 60 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 G+ ++ ERLGP+V G KA +GF RS G+ + ++ D KG + Sbjct: 61 GVDTRQADEQIERLGPKVEAAYDAAGQATKAAEGFARSCGVDVDALDSVETD--KGPRLV 118 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 +P E +L +V A+ ++P PK MRW + ++RP+ + +L Sbjct: 119 WRGVQPGEATETILPGLVEAALGRLPIPKRMRWGSGE-----VEFVRPVHWTVALL---- 169 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHP--IKVQSLDHYIRDLE-EAMVLLDPECRRNA 227 E++I + IP G ITYGHRFH I++ Y R LE + V+ D RR Sbjct: 170 -GEQVIPGTILGIPTGRITYGHRFHGRGRRGIEIPEPGAYERLLEEQGHVVADFVERRRR 228 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 + + A G V ++ L +E+ GLVEW G FD+++L +PEE + +++ +Q Sbjct: 229 VETGVRQEAERAGGVPVGEEALFDEVTGLVEWPVALSGDFDQRFLKIPEEALISSMQGHQ 288 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 +CF R +G L FI V+NI++ D + GN RV+ RL DA FW++D+ Sbjct: 289 RCFPVRGTDGQLLARFITVANIESQD-PQQVRHGNERVIRPRLADAEFFWQQDRRLA--- 344 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 L +R+ +L VVFH +G R RI L + + I AD Sbjct: 345 -----------------LGERLEQLRQ--VVFHRSLGDLHARSQRISRLAGLVTERIGAD 385 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 V RA +L+K DL TE+V EFPELQG +G YA E + AI H +P + Sbjct: 386 VEAARRAGLLAKCDLVTEMVDEFPELQGIMGGHYARADGEGDAVAAAIAAHYRPAYAGDA 445 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P VS+AD++DTL+ +A + PS KDP+ LRRA +G++R ++E D+ L + Sbjct: 446 LPETPEGQAVSIADRIDTLVGIFAADGAPSADKDPFGLRRAAIGLLRCLIEGGHDLSLRE 505 Query: 528 FIED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 F++ + + F H+RL+ Y +R ++ EA+ + L Sbjct: 506 FLDTAAGMIADECGVSTEGIAEQVAAFCHERLRGYYAERGYAAEVFEAVAAVAPSSPLDF 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR---- 626 + + F ++ + + KRI IL E + PQ E Sbjct: 566 HRRLVACSTFRERSEAQTLGEANKRIGNILRRAE---------VDPQTRPEAVEADGEAA 616 Query: 627 ---LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 L + + + +D Y L + P++ FF V+V +D VR RL Sbjct: 617 ERALAEALREAWSVAGPRIDRGEYDAALTALAELHGPVDRFFTDVMVMAEDEAVRQRRLE 676 Query: 684 LLQYIKNIILIVINVQKI 701 LL +++ V ++ + Sbjct: 677 LLGAVRHAFRAVADLSHL 694 >gi|320354068|ref|YP_004195407.1| glycyl-tRNA synthetase beta chain [Desulfobulbus propionicus DSM 2032] gi|320122570|gb|ADW18116.1| glycyl-tRNA synthetase beta chain [Desulfobulbus propionicus DSM 2032] Length = 694 Score = 576 bits (1485), Expect = e-162, Method: Composition-based stats. Identities = 201/728 (27%), Positives = 337/728 (46%), Gaps = 69/728 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L EI +EEIPA A + L+ L+ + ++ +R + TP RL L + L Sbjct: 1 MSELLFEIGTEEIPAGYIQPALDALAAGTAKKLRSLDLAFEGIRTFGTPRRLTLTIDRLQ 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 ++ +E +GP G KA GF RS G + + + KG+ + V Sbjct: 61 SRQADRRQEHIGPSKKAGFDAEGKLTKAAIGFARSKGCEPEALQVV--TTAKGEYLMVVE 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +L ++ ++++ +PKSMRW+ + ++ RP++ I+ + Sbjct: 119 DVQGQATSALLPVLLESLVRELVFPKSMRWADYN-----MAFARPIQWIVALY-----DG 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + + L+++ + CG T GHRF AP +V +D Y+ L E VL+DP RR ++ + Sbjct: 169 QGVPLEIEGVGCGRTTRGHRFMAPAEFEVGGIDEYLTKLAEHFVLVDPVQRRAKVIEEIQ 228 Query: 234 RL----ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 R A + + + LL+ + LVE+ G F++K+L LPEE + +++ +QK Sbjct: 229 RAVREGAGNPDAQPILHEGLLDTVTNLVEYPYGVCGHFERKFLQLPEETLVTSMREHQKY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +EG L F+ V+N + D A G+ RV+ ARLED L F+ D+ Sbjct: 289 FPVTDKEGKLLPLFVAVNNTRIEDV-ALAASGHERVLRARLEDGLFFFHEDR-------- 339 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-V 408 +PL R A L +VF K+GT + RI L +A I + Sbjct: 340 ------------KRPLADRCAELS--GIVFQNKLGTMAAKSERITRLAVALAGKIAPELE 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+KADL T +V EFP LQG +G+ YA+ E AIEEH P + Sbjct: 386 HDAIRAARLAKADLLTAMVGEFPTLQGIMGRVYALHDGEKAEVAQAIEEHYLPLRAGGEL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + V +AD++DTL+ +AI EKP+G+KD + LRR +G+I +I + + L + Sbjct: 446 PQSLLGALVGIADRMDTLVGCFAIGEKPTGNKDAFGLRRQAIGLINVIKGCNLSLSLGEV 505 Query: 529 IED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 ++ F R + + +L+EA DN + + Sbjct: 506 AAAALQGYEGVVAQNPEVLDEVLSFIRLRFENEQIAAGLPQELVEAATSVGCDNPVDCLR 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 I L++ + S KRI I+ + + I+ L AE+ L+A ++ Sbjct: 566 RIAALDQIRTQESFRVLAGSFKRIRNIVKKNK------ATAINTDLLTEPAEQELFAALN 619 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + Y + + EP++ FFD+V+V +D VR NRL+LL + ++ Sbjct: 620 RVREKAWPMIEQREYQPALLEMLEMKEPVDRFFDKVMVMAEDEAVRQNRLNLLTALGELV 679 Query: 693 LIVINVQK 700 L V ++ + Sbjct: 680 LRVGDISR 687 >gi|108762825|ref|YP_631304.1| glycyl-tRNA synthetase subunit beta [Myxococcus xanthus DK 1622] gi|122389055|sp|Q1D7R9|SYGB_MYXXD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|108466705|gb|ABF91890.1| glycyl-tRNA synthetase, beta subunit [Myxococcus xanthus DK 1622] Length = 703 Score = 576 bits (1485), Expect = e-162, Method: Composition-based stats. Identities = 208/734 (28%), Positives = 358/734 (48%), Gaps = 72/734 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLE+ +EEIPA A +DL ++ + + + + +R + TP RL +++K + Sbjct: 1 MARDLLLEVGAEEIPASFIGPALDDLKRVITERMADARLKHGEVRTFGTPRRLAVWVKDV 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + I+E LGP G KA + F S L D + KG+ A Sbjct: 61 ADAGEDIIKEVLGPSAKAAFDAQGKPTKAAEKFAESLKLAV--DQLGRATTAKGEYLSAR 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + R D+LK + A+ + + KSMRW + S+ RP++ ++ +L ++ Sbjct: 119 VEEKGRPAADILKDTLHAAVHGINFRKSMRWGDVDT-----SFARPVQWLVALLGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ + ++ G T GHRF +P I++++ Y LE+A V+ D RR ++ Sbjct: 171 --VLPVVFGDVTSGRTTRGHRFLSPDAIELKAPAEYEVALEKAHVVADITKRRAQLVEKV 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 AS G +L+ED+ L++++ LVE +G+F++++L LP E++ +K++Q+ F Sbjct: 229 RAAASKAGAQLLEDESLVDQVTNLVELPSPVVGTFEERHLDLPPEVLVQEMKSHQRYFSL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI VSN D ++G RV+ ARL D F+ D+ Sbjct: 289 VDSAGKLQPKFIAVSNTPVRDE-QLSLRGYQRVLRARLADGRFFFDEDR----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVAL 410 PL R+ +L VV+ ++G+ E+V R R L + Q + A Sbjct: 337 ---------KTPLIDRVEKLGR--VVWQGQLGSYLEKVERFRTLAVWLGQEAGRAGEAAT 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++RA L+KADL T +V EFPELQG +G+EYA E + AI EH PRG + +PT Sbjct: 386 IERAATLAKADLVTGMVGEFPELQGIMGREYARAGGEPDAVALAIAEHYLPRGAEDALPT 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +AD+LD+L +AI + P+G+ DP+ALRRA + IIR++L LS ++ Sbjct: 446 QDPGALIGIADRLDSLCGIFAIGKAPTGAADPFALRRACIAIIRLVLGRGYRFSLSAAVD 505 Query: 531 ----------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++ FF RLK ++ R D++EA+L D+L+ Sbjct: 506 ESLRLLAPKIANAKRKAGEPAPREQVLEFFRGRLKALWGEQ-HRTDVVEAVLSAGFDDLV 564 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRL 627 ++ L+ A + ++ KR+ I+ EK+ R++ E +PQ L+ E E+ L Sbjct: 565 AAQKRLEALSHIVGRADFQPLAVAFKRVVNIV---EKQGRDVQGGETNPQKLVDEPERNL 621 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + + + + + + + ++ FFD+V+V +D+ +R+NR+ LL Sbjct: 622 HTAFTQARSTVSGLVRVDDFSGALREITGLKPAVDTFFDKVMVMAEDKALRENRIRLLVE 681 Query: 688 IKNIILIVINVQKI 701 I + V + KI Sbjct: 682 IGALFNQVADFSKI 695 >gi|255659369|ref|ZP_05404778.1| glycyl-tRNA synthetase, beta subunit [Mitsuokella multacida DSM 20544] gi|260848454|gb|EEX68461.1| glycyl-tRNA synthetase, beta subunit [Mitsuokella multacida DSM 20544] Length = 680 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 208/730 (28%), Positives = 337/730 (46%), Gaps = 80/730 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EE+PA + L KE + ++ +R TP R L ++GL Sbjct: 1 MAKDLLFEIGTEEVPAHVMPGTLAQLKENAEKAFKENRIAFKAVRTLGTPRRTALIVEGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP V G KA GF R + K A Sbjct: 61 AEKQEDVASENRGPSVKIAFDAEGNPTKAAQGFARGQHVDPKDLVV------KDGYVYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + + +L+T++P + + +P +MRW F +IRP++ + + A+ Sbjct: 115 VHEEGQPTAKILETLLPELVCGLSFPNNMRWGNLD-----FKFIRPIRWFVALYGAD--- 166 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I +L + G + GHRF + ++ Y + EE +++D + R+ I Sbjct: 167 --VIPFELANVKSGRTSRGHRFLSQGDFEIADAKSYEKACEENFIIVDQDKRKQMIREQI 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A A G + +DLLEE++ LVE+ G F++KYL LP E + ++ +Q+ F Sbjct: 225 EAVAKANGGQAEITEDLLEEVLYLVEYPTALCGKFEEKYLQLPPEAVITPMRDHQRYFPV 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +T EG L FI V N + + GN RV+ ARL DA F+ D+ Sbjct: 285 KTAEGKLLPLFITVRNGG-KEYLETVQHGNERVLRARLADAQFFFDEDR----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---A 409 K L++ +L VVF +GT E+ R+ L IA I AD Sbjct: 333 ---------KKTLEEHREKLKT--VVFQQGLGTMYEKTERLEKLADFIADAIGADEKAHK 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSKADL T +V EF ELQG +G+EYA L E AI+EH KPR ++ P Sbjct: 382 HARRAAILSKADLVTGMVTEFTELQGIMGREYAKLDGECEKVAIAIDEHYKPRFAGDSQP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 VSLADK+DT++ +++ + P+GS+DP+ALRR LG++ +I+E K + LS Sbjct: 442 QTTAGRIVSLADKIDTIVGTFSLGKIPTGSQDPFALRRQALGLVNMIIEAKYHLSLSAIV 501 Query: 529 ----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 Q++ F RLK L IR+D+++A+L + D++ + Sbjct: 502 AKAMDLYGIEDEKARAKMQQDVADFIRLRLKNVLES--IRYDVVDAVLA-DVDDIYAVAL 558 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K + ++ +S + + R+ + E S E+S +AE+ L+A Sbjct: 559 RAKAVADYVASTDAAAGIQAFVRVANLAKKAE------SAEVSADLFQTDAERNLFAAYE 612 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + Y + L ++ PI+ FFD V+V D ++++NRL LL+ I ++ Sbjct: 613 KA----SAAVASESYAEAITALAALAAPIDTFFDDVMVMDKDEKIKNNRLGLLKSIDQLV 668 Query: 693 LIVINVQKIV 702 + + KIV Sbjct: 669 SRIADFTKIV 678 >gi|307243671|ref|ZP_07525811.1| glycine--tRNA ligase, beta subunit [Peptostreptococcus stomatis DSM 17678] gi|306492880|gb|EFM64893.1| glycine--tRNA ligase, beta subunit [Peptostreptococcus stomatis DSM 17678] Length = 689 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 225/728 (30%), Positives = 364/728 (50%), Gaps = 67/728 (9%) Query: 1 MPDFLL-EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LL EI EE+P+R L L L E V + + Y TP RL L ++GL Sbjct: 1 MNNYLLYEIGVEEMPSRFVESTLGQLKDNLTRALTENRVGFSEIETYATPRRLVLVVRGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G+ KA GF++ GL KD + A Sbjct: 61 ADRQADLEEEVKGPSKKIALAEDGSFTKAALGFMKGKGLSEKD--VYFKDLDGTEYIYAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 L++ E +L ++ ++ V +PKSMRW ++RP++ +L ++ Sbjct: 119 LKETGEDTEKILCDVLGEIVKAVVFPKSMRWG-----GKNMRFVRPIRWLLALM-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ ++++ I N T GHRF I+V S++ Y+ LEE V+LD R+ I + Sbjct: 169 DRVVPVNMEGIVASNKTVGHRFLGSKSIEVISIEDYLAKLEENYVILDQAKRKAIIRDQI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++A+++ + D+DLLEE+ +VE+ F G FDK+Y LP+E+++ +K +Q+ F Sbjct: 229 DKVAASINGRVDMDEDLLEEVTYIVEYPTAFYGEFDKEYASLPKEVVKTPMKAHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI V N + +GN +V+ ARL DAL F+K D+ Sbjct: 289 VDDRGELLANFIAVRNG-NDYMIENVKKGNEKVLEARLADALFFFKEDR----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVAL 410 K L ++LD VVF K+GT ++ R+ L KIA IDA L Sbjct: 337 ---------KKALVDYRSQLDT--VVFQEKLGTLLDKSERLYKLAGKIADEIDAGIKKDL 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++RA L KADL T +V EF ELQG +G EY+ L E+ +AI EH PR + +P Sbjct: 386 LERAAYLCKADLVTSMVFEFDELQGYMGMEYSKLDKEDPIVSEAIYEHYMPRFSGDEIPQ 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S+ DK+DT+ F+AI +P+GS DP+ALRR LGI+ I+LE I++ +++ + Sbjct: 446 SAEGAILSIVDKIDTIAGFFAIGIQPTGSADPFALRRQCLGILTILLEKNIELDIAKLAD 505 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++ FF++R ++ D IR+D+++A+L + N+ + Sbjct: 506 LALDQYAGVDFDKDVVVDQIVAFFNERTRVMFKDLGIRYDVVDAVLASDEKNMSDLYARA 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + +N + + L++ R+ + E L+I LL AEK LYA Sbjct: 566 QAINAWIDNPSLNDMLVAFNRVSTLAEKAE------GLDIKEATLLEAAEKDLYAKFVLV 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I++ M K+Y + D S+ I+ FFD V+V ++ +VR+NRL+LL I +L Sbjct: 620 EKEIEDLMGQKKYTESLDSFASLKPAIDAFFDTVMVMDENLDVRNNRLALLANIYKAMLK 679 Query: 695 VINVQKIV 702 + ++ KIV Sbjct: 680 ICDLSKIV 687 >gi|103487096|ref|YP_616657.1| glycine--tRNA ligase [Sphingopyxis alaskensis RB2256] gi|98977173|gb|ABF53324.1| Glycine--tRNA ligase [Sphingopyxis alaskensis RB2256] Length = 723 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 249/754 (33%), Positives = 363/754 (48%), Gaps = 86/754 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPARMQ A +L + + G++ ++ + TP RL L + L Sbjct: 1 MTDFLLELRSEEIPARMQAGARAELEKLFRTQMSAAGIVVGDLTIWSTPRRLALIARDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GPR A +A++GFLR TGL + V+ AV+ KP R Sbjct: 61 DATAAVSEELKGPRTSAPPQALEGFLRKTGLTQDQL------EDRDGVWFAVIDKPGRAT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL +P ++ WPKSMRW + + W+RPL I+ I E +I ++ Sbjct: 115 AEVLAEAIPAIVRAFAWPKSMRWGRDSASSESLRWVRPLSGIVAIF-----GEALIPCEV 169 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRFH P I + S Y L V++D R I + A + A+ G Sbjct: 170 GGISAGFATRGHRFHCPGEITIGSASDYAEKLRACHVIVDHAERARIIRDGAAKAAADAG 229 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L LVED+ L+ E GL EW +G FD+ +L +P E+I+LT + NQK FV +G LA Sbjct: 230 LSLVEDEGLVIENAGLTEWPVPLLGRFDEAFLAVPPEVIQLTARVNQKYFVVNDADGKLA 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F+ +NI A DGGA IV GN +V+AARL DA FW++D+ Sbjct: 290 NGFVCTANIDAVDGGAEIVAGNQKVLAARLSDARFFWEQDR------------------- 330 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---IDADVALVDRAIVL 417 L +LD + FH K+GT ++V R+ L + +A + D AL +A L Sbjct: 331 -KTKLADHAKKLDR--ITFHEKLGTVADKVERVAKLAEWLANEGIVPNCDPALARQAAEL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TE+V EFPELQG +G YA + + DAI +H KP G ++VPT +++ V Sbjct: 388 AKADLVTEMVGEFPELQGLMGGYYARAEGLPQAVADAIRDHYKPVGQGDDVPTAPVTVAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 +LADKLDT+ F+ N KP+GSKDP+ALRRA LGII + + + + + ++ Sbjct: 448 ALADKLDTIAGFFMKNMKPTGSKDPFALRRAGLGIIALTVRSSLRGDIGTWLAAARRYFV 507 Query: 531 -----------------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 + F DRLK+ + +RHDLI+A+ Sbjct: 508 DQDIVDEREYPDAYATKDAAISAGLATVFMDEVRDFIADRLKVQQREAGVRHDLIDAVFA 567 Query: 562 PEN-DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI----EEKKNREISLEI-- 614 D+L+ ++ +K L F ++ G L KR IL E R + ++ Sbjct: 568 LGGEDDLVRLLARVKALQAFMATEDGTNLLAGYKRAANILKQASVPAEAGTRGGAAQVLE 627 Query: 615 --SPQYLLLEAEKRLYA-----VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 +P L ++ + ++ +R+ L S+ PI+ FF+ Sbjct: 628 EGTPGLRLSPECMTVHDAALLAALDTAEPAALNAVADERFTDAMAALASLRAPIDAFFEG 687 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+VN D VR RL LL + V + KI Sbjct: 688 VMVNDPDEVVRAYRLGLLARFTGAVHGVADFSKI 721 >gi|146276696|ref|YP_001166855.1| glycine--tRNA ligase [Rhodobacter sphaeroides ATCC 17025] gi|145554937|gb|ABP69550.1| Glycine--tRNA ligase [Rhodobacter sphaeroides ATCC 17025] Length = 758 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 260/782 (33%), Positives = 387/782 (49%), Gaps = 107/782 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL ++ KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGLTRDQLET--REDKKGAVLFAVVEKPGRRA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ I+ PWPKSMRW + W+RPL SILC+L E A +++ + + Sbjct: 119 PDIVAEVLERTIRTFPWPKSMRWG-----TGSLRWVRPLHSILCLLSDE-AGSQVVPVTV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 ++ N T GHRF AP V D Y L+ A+V+LD R AI ++A A A G Sbjct: 173 DQVTAVNTTEGHRFMAPGRFAVTGFDDYRAKLQRALVMLDAAEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V D LL E+ GLVEW V MG +++L LP E+++ +++ +QK F R Sbjct: 233 LEVVPDAGLLAEVAGLVEWPVVLMGPIGEEFLGLPPEVLQTSMREHQKFFSVRNPATGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I++GN++V++ARL DA FW+ D+ + + Sbjct: 293 EKFVTVANRETADHGATILKGNAKVLSARLSDASFFWENDRRTVQTVG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ A L V FH K+G+Q +R++RI L ++IA L+ A L A ++KA Sbjct: 341 ----LEGMAAGL--AHVTFHNKLGSQADRIARIEALAREIAPLVGASPDLAAEAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA A + H +P GP + VPT+ +S+ V+LA Sbjct: 395 DLQSAMVGEFPELQGTMGSYYARAAGLPEPVALACKAHYQPLGPSDAVPTDPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--IEDQNLILFF 538 DK+DTL FWAI+EKP+GSKDP+ALRRA LG++R++L N + + L L F Sbjct: 455 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVVRLLLMNGLRLSLLNQVRFAHGCLAEQF 514 Query: 539 HDRLKLYLH-----------DRDIRH-----DLIEAILRPENDNLLT------------- 569 + R ++ R+ D +IL +N + Sbjct: 515 NSRFNFFVQIREEPKEAVNIGVGHRYPEVVSDQCTSILMGYVENPVESVASGKFTIDGRA 574 Query: 570 ----------------IVDLIK-----------HLNEFFSSAKGEKFLLSAKR------- 595 D +K ++ + + L KR Sbjct: 575 VGTKPLRLLDNDLLSFFHDRLKVHLREQGIRHDVIDACLAMPGNDDLTLLVKRAEALSAF 634 Query: 596 ---------------IFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 ILA E K+ E S P++ +AE+ L+A + I Sbjct: 635 LKTDDGTNLLQGFKRANNILAQAEAKDGVEYSFGADPKFAETDAERALFAALEQAEAAIA 694 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +M + + + ++ PI+ FFD V VN D+ +R NRL++L I+ V ++ Sbjct: 695 PAMQAEDFGAAMAAMAALRAPIDAFFDTVQVNADNPVLRRNRLNMLHSIRATCASVADLT 754 Query: 700 KI 701 +I Sbjct: 755 RI 756 >gi|302383878|ref|YP_003819701.1| glycyl-tRNA synthetase subunit beta [Brevundimonas subvibrioides ATCC 15264] gi|302194506|gb|ADL02078.1| glycyl-tRNA synthetase, beta subunit [Brevundimonas subvibrioides ATCC 15264] Length = 729 Score = 575 bits (1482), Expect = e-161, Method: Composition-based stats. Identities = 256/766 (33%), Positives = 373/766 (48%), Gaps = 104/766 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP L+E++SEEIPARMQ AA DL + LK G+ + + + P RL L + GL Sbjct: 1 MPQLLIELFSEEIPARMQGGAARDLERMATERLKAAGLSWDALTTWAGPRRLTLVIDGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +P++ EE GPR A ++A++GFLR TGL D ++D V AV+ + R Sbjct: 61 AATPDRSEELKGPRANAPEQALEGFLRKTGLT--RDQLTERDG----VLFAVIEEAGRPT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 V+ + ++ PWPKSMRW + W+RPLK I+ + E ++ + Sbjct: 115 TTVIAETLDQIVRAFPWPKSMRWGS-----GTLRWVRPLKRIVALF-----DEAVVPFAI 164 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I G++T GHRF P V+ Y L++ VLLD R+ IL A A Sbjct: 165 DGIQSGDVTEGHRFMGAGQPFAVKDFADYRAKLDQHFVLLDAADRKLKILEAARAACHAR 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGV 298 GLELV+D LL+E+ GL EW +G D ++L LP E++RL++K +QK F R G Sbjct: 225 GLELVDDDGLLDEVAGLAEWPTPILGDMDPQFLALPPEVVRLSMKVHQKYFAVRDPATGK 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FI+V+N++ASDGG A+ GNSRV++ARL DA FW D+ Sbjct: 285 LAPNFIVVANVEASDGGVALAAGNSRVLSARLNDARFFWDEDR----------------- 327 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 D +L V FHAK+GT RV RI L ++IA L+ AD + A LS Sbjct: 328 ---KTGFDAWNEKLK--GVTFHAKLGTLAGRVDRIAALAREIAPLVGADPDQAETAARLS 382 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA + + DA+ +H KP+GP ++VPT +++ V+ Sbjct: 383 KADLASAMVGEFPELQGIMGGYYARADH-GDAIADAVRDHYKPQGPADSVPTAPLTVAVA 441 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--EDQNLIL 536 LADKLDTL+ F+AI+EKP+GSKDP+ALRRA LG+IR+IL+N + L L Sbjct: 442 LADKLDTLVGFFAIDEKPTGSKDPFALRRAALGVIRLILDNGQRVALMPVFGSAFAELST 501 Query: 537 FFHDR--------------------------------------LKLYLHDRDIRHDLIEA 558 R + + D D + A Sbjct: 502 KAWGRPIARLADLEIAEEDGELTTAQTAELVQLRAADVQGRDPVGHTVEDDVANVDALLA 561 Query: 559 ILR----------------------PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 +D+L+ IV ++ L+ F ++ G L KR Sbjct: 562 FFADRLKVLLRDQGKRHDLVDAVFALGDDDLVRIVRRVEALDAFLATDDGANLLAGYKRA 621 Query: 597 FQILAIEEKKNREISLEISPQYLLL-EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 IL E KK + ++ EAE L T + +++ + + L Sbjct: 622 SNILKAEAKKGEVPTGMVATGLANQPEAETTLAFATDVARTAVDTALETEDFAAAMTALS 681 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + P++ FF V+VN D RDNRL LL +++++ V + ++ Sbjct: 682 RLRAPVDAFFTDVMVNSDVPAERDNRLKLLGQVRDVMGRVADFGQV 727 >gi|262196558|ref|YP_003267767.1| glycyl-tRNA synthetase subunit beta [Haliangium ochraceum DSM 14365] gi|262079905|gb|ACY15874.1| glycyl-tRNA synthetase, beta subunit [Haliangium ochraceum DSM 14365] Length = 705 Score = 575 bits (1481), Expect = e-161, Method: Composition-based stats. Identities = 209/736 (28%), Positives = 339/736 (46%), Gaps = 71/736 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D LLEI +EEIPA + E LS L + + + ++ TP R+ L + ++ Sbjct: 3 ADLLLEIGTEEIPAALLTGVIETLSRRAEDALADARLGHGSVTVLGTPRRIVLSVAEVAG 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +GP G KA GF + G++ + + + + KKG+ + Sbjct: 63 QQRDLSERVVGPPARVAFDADGRPTKAAAGFAKKNGVELDALERSEVEGKKGEYVVCTRH 122 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R +VL ++ I +PWPKSMRW + ++RP+ ++ +L E+ Sbjct: 123 EAGRPAAEVLPGLLEALIAALPWPKSMRWGFGETA-----FVRPVHWLVALL-----GEQ 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSL-DHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ L I GN + GHRF AP V S Y+ + E V+ DP RR I + Sbjct: 173 VLPLQFAGIRAGNSSRGHRFLAPAAAPVPSSLPGYLEVMRERFVIADPALRREMIAAELS 232 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 R+ +G + D++LL E+ LVE+ GSF++ +L +P+E+I ++ +Q+ F Sbjct: 233 RVEGEIGARVRPDEELLAEVANLVEYPMAVCGSFNEGFLEVPQEVIVSAMRAHQRYFAIE 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N F+ ++ D + GN RV+AARL DA F++ D+ Sbjct: 293 DASGALVNRFVTIAGTVTRDA-DVVRAGNERVLAARLSDAQFFFREDR------------ 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 LD +LD DVVF AK+G+ G +V RI + +A + AD V R Sbjct: 340 --------KGTLDDLAQKLD--DVVFQAKLGSIGAKVRRIGAIATALAAQVGADETAVAR 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL + +V EFP+LQG +G+ YA L E+ + AI EH PRG + +P + Sbjct: 390 AAELCKADLVSHMVYEFPDLQGVMGQHYARLAGESDAVASAIYEHYLPRGAGDELPATDV 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI---- 529 + +AD++DTL+ +A+ PSGS DPY LRRA LGI+ ++LE + LS+ + Sbjct: 450 GAVLGIADRIDTLLGCFAVGLSPSGSADPYGLRRAALGILTLLLERGWSLSLSRLVDEAA 509 Query: 530 ------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ F RLK L + D +EA L D++ + + Sbjct: 510 AALAGTVEVSAAHKEEVLSFLRTRLKGLLSA--LPADCVEAALSAGFDDVPDARARAQAV 567 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAI------------EEKKNREISLEISPQYLLLEAEK 625 E ++ KR+ +L + + P + +AEK Sbjct: 568 AALRQREDFEPLGVAFKRVANLLKSAADKAGAGAAGADAAADAAADAAPDPDLMSDDAEK 627 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L++ + E ++ Y +L + P++ FFD+VLV +D VR NRL+LL Sbjct: 628 ALWSAYGEIERQAAEPLERGDYEAALAVLAELKSPVDRFFDEVLVMAEDPRVRQNRLALL 687 Query: 686 QYIKNIILIVINVQKI 701 I + + + + Sbjct: 688 SRIGGGFARIADFRLL 703 >gi|307822586|ref|ZP_07652817.1| glycyl-tRNA synthetase, beta subunit [Methylobacter tundripaludum SV96] gi|307736190|gb|EFO07036.1| glycyl-tRNA synthetase, beta subunit [Methylobacter tundripaludum SV96] Length = 688 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 210/696 (30%), Positives = 329/696 (47%), Gaps = 63/696 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L E+ SEE+P + K + L + L + + + Y TP RL ++++ L+ Sbjct: 6 LLFELGSEELPPKTLLKLSNALLNNITQGLNAAELTFTGSKAYATPRRLAVFIENLATAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+K E+ GP + G+ KA GF S G ++K D KG+ Sbjct: 66 PDKTVEKRGPAIQAAFAPDGSPSKAALGFAVSCGTSFDQLERLKTD--KGEWLSFTQAVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E+++ I+ +I +P K MRW + + ++RP+ + + + +I Sbjct: 124 GQATENLIPDIIRQSIAGLPIAKRMRWGSFTT-----EFVRPVHWAVLLY-----GDSVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRL 235 D ++ + G T GHRFHAP I + + Y L + V+ D E R+ I + A + Sbjct: 174 DTEILGLKTGAATQGHRFHAPQKITLTKPEDYADVLYKQGRVIADLEQRKTLIRDAAQKA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+AV + + DLLEEI L EW G+FD ++L LP E++ T++TNQK F + Sbjct: 234 AAAVHGQAHIEDDLLEEIAALNEWPVPITGTFDPRFLELPPEVLITTMQTNQKYFPVKNA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI SNI+++ +I QGN RVV RL DA FW +D+ Sbjct: 294 DGGLLANFITFSNIEST-NPKSIQQGNERVVTPRLSDAEFFWNQDR-------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 K L+ R+ L VVF +GT + R++ L K IA ++A++ L +RA Sbjct: 339 ------KKTLEDRVESLS--SVVFQENLGTVFAKTKRVQNLAKFIAGHLNANIELAERAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL TE+V EF LQG +G+ YA+ NE AIEE P+ + Sbjct: 391 LLAKTDLMTEMVGEFGNLQGIMGRYYALADNEPEEVALAIEEQYFPKQSGSPTADSTTGQ 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-- 533 +++A+K+DTL+ +A+ P+G KDPYALRRA LGI+R I+ENK++I + + E Sbjct: 451 VLAIAEKIDTLVGIFAVGLIPTGDKDPYALRRAALGILRTIIENKLNINIIELTEFAGAQ 510 Query: 534 -------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F DRLK Y D+ D +A++ L + ++ + F Sbjct: 511 IKTTSDQSGTSDRVIDFIFDRLKGYCLDQGYTADEFDAVITVTPAEPLDFMQRLQAVKAF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + E + KRI IL E + S LL EK+L IQ Sbjct: 571 RQLPEAESLAAANKRIRNILKKSESQ-----PAASVGALLEPQEKQLLQAALQSADDIQP 625 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 + + Y + L + ++ FFD V+V DD + Sbjct: 626 LLAQRNYQATLNRLAGLRNDVDAFFDHVMVMTDDLD 661 >gi|163746094|ref|ZP_02153453.1| glycyl-tRNA synthetase subunit beta [Oceanibulbus indolifex HEL-45] gi|161380839|gb|EDQ05249.1| glycyl-tRNA synthetase subunit beta [Oceanibulbus indolifex HEL-45] Length = 768 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 261/777 (33%), Positives = 388/777 (49%), Gaps = 102/777 (13%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 PD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L L + Sbjct: 15 PDLLIELFSEEIPARMQKRAGEDLQKLVTNGLVEAGLTYGSAAVFTTPRRLTLALGDMLA 74 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 SP ++EER GP+ A +KAI+GFLR GL D ++D KG V+ A + KP R Sbjct: 75 ASPRQVEERKGPKADAPEKAIEGFLRGAGLT--RDQLEERDTPKGKVFFAKIEKPGRPAA 132 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 +++ ++ I+ PWPKSMRW + W+RPL SILCI+ E A +++ L + Sbjct: 133 EIVAEVLEQTIRNFPWPKSMRWG-----TGSLKWVRPLHSILCIINDE-AGAEVVPLTVD 186 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 I GN T GHRF AP I+V + Y L A V+LDP R + I NDA +A A GL Sbjct: 187 GITAGNTTRGHRFLAPGEIEVAGFEDYQTKLARASVVLDPAARADTIWNDATNMAFAAGL 246 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 E+VED LL E+ GLVE+ V MG + +L LP E+++ ++K +QK F R + Sbjct: 247 EVVEDAGLLAEVAGLVEYPVVLMGRIGEDFLGLPPEVLQTSMKEHQKFFSVRNPKSGQIE 306 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F+ V+N +D GA I+ GN +V+ ARL DA FW D + Sbjct: 307 RFVTVANRTTADDGATILAGNEKVLGARLSDAKFFWDNDLRTVTAEGG------------ 354 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 + + L+ +V FH K+GTQ E + R+ L +++A L+ AD ++A ++KAD Sbjct: 355 ---MATWVKALE--NVTFHNKLGTQAELIDRMATLSRELAPLVGADADEAEQAARVAKAD 409 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L +E+V EFPELQG +G YA + + DA ++H P GP ++VPT +SI V+LA+ Sbjct: 410 LSSEMVYEFPELQGLMGSYYARKAGLSDAVADAAKDHYAPLGPSDDVPTAPVSIAVALAE 469 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----------------- 524 K+D L FWAI+EKP+GSKDP+ALRRA LG+IRI++EN + + Sbjct: 470 KIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRILVENDVSLAVLESGIWPAIQSHPFPF 529 Query: 525 ---LSQFIEDQ----------------------NLILFFHDRLKLYLHDRDIRHDLIEAI 559 L + + + L+ D + I Sbjct: 530 ADVLRKIEDHEGLLATLRGGKLPIGPIEMDRDGELVQKISDLAIAEQEATRAKLFSILGN 589 Query: 560 LRPENDNLLT-IVDLIKH-----------LNEFFSSAKGEKFLLSAKR------------ 595 L ++ +LL+ I D +K ++ + + L KR Sbjct: 590 LHFKSSDLLSFIHDRLKVYLRDQGIRHDIIDACIAMDGSDDLTLLVKRARALSETLKTDD 649 Query: 596 ----------IFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 IL+ E+ + E S P++ EAEK L+A + I +M Sbjct: 650 GENLIQGFKRANNILSQAEEADGVEYSFGADPKFAETEAEKDLFAALDKAEAKITPAMAA 709 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + PI+ FF+ V VN ++ VR NRL+LL I+ I V ++ K+ Sbjct: 710 QDFSTAMAAMAELRGPIDAFFEAVQVNANNPTVRRNRLNLLSRIRTICSAVADLTKL 766 >gi|148557751|ref|YP_001265333.1| glycine--tRNA ligase [Sphingomonas wittichii RW1] gi|148502941|gb|ABQ71195.1| Glycine--tRNA ligase [Sphingomonas wittichii RW1] Length = 677 Score = 574 bits (1479), Expect = e-161, Method: Composition-based stats. Identities = 257/716 (35%), Positives = 363/716 (50%), Gaps = 56/716 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPARMQ KA+ DL+ + L + G+ + Y TP RL L GL Sbjct: 1 MADFLLELLSEEIPARMQEKASADLARLFTEELAKAGLTPDGITSYVTPRRLALIAHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GP+ A +A++GFLR TGL + +++D AV+ KP R Sbjct: 61 VETAAVSEELKGPKASAPPQALEGFLRKTGLT--REQLVERDG----TLFAVIEKPGRAT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 VL +P ++ PWPKSMRW T +A W+RPL+ I+ +L E+I+ ++ Sbjct: 115 AAVLAEAIPAIVRNFPWPKSMRWGTASLSTAALRWVRPLQGIVALL-----GEEIVPFEI 169 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G T GHRFH P I + S Y L V++D RR+ I A LA+ G Sbjct: 170 DGVASGAATVGHRFHHPGIITIGSAADYAGKLRACHVIVDHAERRDIIRARAAELAAGQG 229 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 + ++ D+ L+ E GL EW +G FD +L +P E+I+LT++TNQK FV EG LA Sbjct: 230 MTVIPDEGLVAENAGLTEWPVPLLGHFDPAFLEVPREVIQLTLRTNQKYFVLNDAEGKLA 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI +NI A DGGAAIV GN +V+AARL DA FW++D Sbjct: 290 PAFICTANISARDGGAAIVAGNGKVLAARLSDAKFFWEQD-------------------- 329 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVALVDRAIVLS 418 L PLD + +L+ ++F+ +GT E+ RI L IAQ + D RA +L+ Sbjct: 330 LKVPLDDYLPKLE--AMLFYEGMGTLREKADRIAALAAWIAQAYFPERDPETARRAGLLA 387 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T +V EFPELQG +G YA + E A+++ I V+ Sbjct: 388 KADLATAMVGEFPELQGVMGGYYAEKRGEKPGTVSALKQQYVAAVEG------CIPACVA 441 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 LAD++DTL+ F+A KP+GSKDP+ALRRA L I+ IL N + L IE Sbjct: 442 LADRIDTLVAFFARGIKPTGSKDPFALRRAALQTIQTILVNGTRMNLLATIEQAKTGLGA 501 Query: 532 -----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFFSSAK 585 L+ FF DRLK+ + +RHDLI+A+ D+L+ ++ +K L F + Sbjct: 502 SGLDSAELLDFFADRLKVQQREAGVRHDLIDAVFALGGEDDLVRLLARVKALQAFVETED 561 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G L KR IL E S P Y AE L A + +++ + Sbjct: 562 GANLLAGYKRAANILRKEGGVPEGASAT--PDYQPEVAESALIAALDAAEPKAAAAVEAE 619 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ PI+ FFDQV+VN R+ RL+LL+ I+ + V + I Sbjct: 620 DFAGAMAALATLRGPIDAFFDQVIVNDSSSSKRNTRLALLEKIRVAVHNVADFSNI 675 >gi|149927715|ref|ZP_01915967.1| glycyl-tRNA synthetase subunit beta [Limnobacter sp. MED105] gi|149823541|gb|EDM82771.1| glycyl-tRNA synthetase subunit beta [Limnobacter sp. MED105] Length = 694 Score = 574 bits (1479), Expect = e-161, Method: Composition-based stats. Identities = 211/726 (29%), Positives = 354/726 (48%), Gaps = 62/726 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 L+E+++EE+P + + +L L++EG + N + + +P RL + + Sbjct: 3 STLLVELFTEELPPKALQTLGNAFAELLSKTLRDEGHLADNSAVEAFASPRRLACRITNV 62 Query: 60 SPHSPEKIE-ERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLA 111 + SPEK ERL P G + L S GL I+ Q++ K DV Sbjct: 63 AAVSPEKKIQERLLPVKIGLDANGQPTPPLQKKLDSLGLGAIAVDQLETISDGKQDVLHI 122 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +ED L + A K+P PK M + S ++RP ++C+ Sbjct: 123 SRTQAGKALEDSLTKALDTATTKLPIPKVMSYQRPDG--STVHFVRPAHRLVCL-----H 175 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K++ + + IT GHRF + + + S D Y LE E V+ R+ AI+ Sbjct: 176 GDKVVPAQVLGLESDRITLGHRFLSQGVLNIASADSYETQLETEGKVIASFTKRKAAIVK 235 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A+ G ++V+ +DL++E+ LVEW V+ F+K++L +P+E + LT++ NQK F Sbjct: 236 SLAEQAA--GDKVVQPEDLIDEVCALVEWPVVYEAGFEKEFLEVPQECLILTMQANQKYF 293 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G + N F+LVSN+ S I GN RV+ ARL DA F+ +D+ Sbjct: 294 AITDQNGKMKNRFLLVSNLLTS-TPQLITTGNERVLRARLADAKFFFDQDR--------- 343 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ R+ L +VV+H K+GTQ +R R+ L +A L ADV L Sbjct: 344 -----------KKTLESRLPGL--ANVVYHNKLGTQKDRNGRLVELAAALAPLCGADVEL 390 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +L KADL T++V EFPELQG +G+ YA E+ AI +H PR + +P Sbjct: 391 AKRAALLCKADLLTDMVGEFPELQGNMGEHYAHHDGEHADVAQAIADHYSPRFAGDQLPR 450 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N + + +LADKL+T++ + I P+G KDP+ALRR LG+IR+++E + + L + Sbjct: 451 NPVGLAAALADKLETMVGIYGIGLIPTGDKDPFALRRHALGVIRMVIEKNLKLDLIDALN 510 Query: 531 DQN---------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + L F DRL+ YL D+ +E++L + ++ Sbjct: 511 KASSLFSAFPDFKQSVEGLAGFIQDRLRGYLKDQGYTTAEVESVLSQNPSQFADLPKRLE 570 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KRI IL KK S ++ L ++AEK L A + + Sbjct: 571 AVRAFSQLPESQALAAANKRITNIL----KKTEVGSSDVDASLLQVDAEKALAAQVKEVE 626 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 H + + Y Q +L + ++ FF+ V+V ++ +++NRL+LL+++ ++ V Sbjct: 627 PHATRAFEQGDYQQALLVLAPLKANVDAFFENVMVMDNNEALKNNRLALLKHMHGLMNRV 686 Query: 696 INVQKI 701 ++ ++ Sbjct: 687 ADISQL 692 >gi|167646138|ref|YP_001683801.1| glycyl-tRNA synthetase subunit beta [Caulobacter sp. K31] gi|167348568|gb|ABZ71303.1| glycyl-tRNA synthetase, beta subunit [Caulobacter sp. K31] Length = 728 Score = 573 bits (1478), Expect = e-161, Method: Composition-based stats. Identities = 263/766 (34%), Positives = 387/766 (50%), Gaps = 105/766 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLE++SEEIPARMQ AA DL + L G + Q ++ + P RL L ++GL Sbjct: 1 MPQLLLELFSEEIPARMQAAAARDLERMAHEHLAAAGFLPQALKTFAGPRRLTLVVEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EE GPRVGA +A++GFLR GL D +++D V++A + K R Sbjct: 61 IAQADRKEELKGPRVGAPPQALEGFLRKAGLT--QDQLVERDG----VWMAFIEKTGRAT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ +V ++ WPKSM W + W+RPLK ILC+ E ++ + Sbjct: 115 PEIVAEMVETIVRGFAWPKSMTWGSGK-----LRWVRPLKRILCVFDRE-----VVPFAI 164 Query: 181 KEIPCGNITYGHRFHAPHP------IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + I G++T GHRF P K + D Y + L + V+LD E R++ IL Sbjct: 165 EGIESGDVTEGHRFMRVGPGWGGQAFKARDFDEYAKGLLDHFVVLDVEERKSRILEGCKT 224 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L A LELVED LLEE+ GL EW +G D +L LP E+IR +++T+QK F R Sbjct: 225 LCFARNLELVEDLGLLEEVAGLAEWPTPVLGDMDPVFLDLPAEVIRTSMRTHQKYFAVRD 284 Query: 295 R-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G LA FI ++N+Q++DGG I +GN++V+++RL DA FW D Sbjct: 285 PATGGLAPHFITIANVQSADGGKVIAEGNAKVLSSRLSDARFFWDED------------- 331 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 + + + +L+ V FHAK+GT ERV RI L ++IA L+ AD Sbjct: 332 -------VKVGFEPWLDKLN--GVTFHAKLGTMAERVERIVALAREIAPLVGADPDKAAE 382 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+KADL +++V EFPELQG +G YA + D I +H KP+GP + VPT + Sbjct: 383 AARLAKADLTSQMVGEFPELQGLMGGYYARAAGMDPEIADTIRDHYKPQGPSDAVPTAPL 442 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 S+ V+LADKLDTL+ F+AI+EKP+GSKDP+ALRRA LG+IR +L+ +PL + + + Sbjct: 443 SVAVALADKLDTLVGFFAIDEKPTGSKDPFALRRAALGVIRTLLDVGARLPLFEVLSTAH 502 Query: 534 LILF------------------------------------------FHDRL--------- 542 + L +RL Sbjct: 503 VQLASQVSGKRLEDDRWARYQAAKLLGVVDKNAIPIDCTVRVGVDPIEERLSDVRAILEF 562 Query: 543 -----KLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 K+ L D+ RHDL++A+ +D+L+ IV ++ L+ F + G+ L KR Sbjct: 563 FADRLKVTLKDQGKRHDLVDAVFALGDDDLVRIVARVEALDGFLKTDDGKNLLAGYKRAS 622 Query: 598 QILAIEEKKN--REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 IL EEKK E + P E E LY + + E+MD ++ L Sbjct: 623 NILKAEEKKGWKGEGVAALPPS--ASEPEIALYDAVRVVQRPLAEAMDADNFNAAMQRLA 680 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + P++ F D V VN D + R++RLS L ++ + V + I Sbjct: 681 GLRSPVDAFLDGVFVNSDIKVERNSRLSTLAAVRQAMNRVADFSLI 726 >gi|54297752|ref|YP_124121.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila str. Paris] gi|53751537|emb|CAH12955.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila str. Paris] Length = 688 Score = 573 bits (1478), Expect = e-161, Method: Composition-based stats. Identities = 198/722 (27%), Positives = 355/722 (49%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ D K KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSEGNPTPALLGFAKSCGVTV--DALTKTQTDKGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V +++ +P K MRW + RP+ + + +E K Sbjct: 122 EGTKTKDLLPGLVSQSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHK- 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 176 ----ILGVTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AAPLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI VSNI +S+ ++ GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLPYFITVSNIASSNPKQVVL-GNEKVMRARLSDAAFFFKQDK-------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + V+F K+G+ ++V RI+ + ++Q ++ L +RA Sbjct: 337 ------KQPLSAHIP--STEQVIFQVKLGSMYDKVQRIKAMMDHLSQSLNLSSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEETVVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SLAD++DTL +AI +KP+G KDP+ LRR L ++R+++ + LS I++ Sbjct: 449 ALSLADRIDTLAGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKVD--IKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ EP++ FFD V+V V+D ++ NRL+LLQ ++ ++ V ++ Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEDESLKQNRLALLQRLQELLQGVADIS 686 Query: 700 KI 701 + Sbjct: 687 ML 688 >gi|323142367|ref|ZP_08077199.1| glycine--tRNA ligase, beta subunit [Phascolarctobacterium sp. YIT 12067] gi|322413251|gb|EFY04138.1| glycine--tRNA ligase, beta subunit [Phascolarctobacterium sp. YIT 12067] Length = 723 Score = 573 bits (1478), Expect = e-161, Method: Composition-based stats. Identities = 205/766 (26%), Positives = 337/766 (43%), Gaps = 108/766 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L EI +EEIPA+ L + + E + ++ ++ Y TP R+ G++ Sbjct: 1 MEKLLFEIGTEEIPAKFMPAILAQLKDLTEKKMTELRIPFEAVKTYGTPRRMTFIASGVA 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E GP GA KA GF R G+ + +D D AV Sbjct: 61 EAQEDSTVEAKGPSAKIAFVSGAPSKAAIGFARGQGVDVKE--LVVRD----DYVYAVKH 114 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++D+L ++ + + +PK+MRW+ F ++RP++ ++ + ++ Sbjct: 115 LAGQPVKDLLPGLLTDILTSLNFPKNMRWADHE-----FKFVRPIRWLVALF-----GDE 164 Query: 175 IIDLDLKEIPCGNITYGHRFHAP------------------------------------- 197 +I +++ + G + GHRF P Sbjct: 165 VIPVEITGVKSGKFSRGHRFLRPSALDNAKAHESIGDAAKALFDTVKSKAKNAVASAAIG 224 Query: 198 --HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIG 255 +++ D Y + + + V++D RR I LA A G ++DLLEE+ Sbjct: 225 TIGAVEIPDADSYEKVMYDNYVMVDQNARRELIRQQVTDLAIAEGGHAEINEDLLEEVNY 284 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGG 315 LVEW G F++K+L LP+E I ++ +Q+ F +G L N FI V N + Sbjct: 285 LVEWPTALCGKFEEKFLALPKECIITPMREHQRYFPVLAEDGSLLNKFITVRNGG-KEHL 343 Query: 316 AAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDML 375 + GN RV+ ARL DA F+ D+ + L R+ +L Sbjct: 344 EIVAHGNERVLRARLSDAEFFFNEDR--------------------KQTLADRLEKLKT- 382 Query: 376 DVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVALVDRAIVLSKADLCTEIVREFPEL 433 V F +G ++ R+ +A I+A D ++R +L K DL T +V EF EL Sbjct: 383 -VSFQEGLGNMNDKSKRLVQAVDMLAMAINAKVDKEKLERTALLCKCDLVTGMVIEFTEL 441 Query: 434 QGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAIN 493 QG +G+EYA L E I EH PR + +PT I +ADKLD + ++ Sbjct: 442 QGVMGREYAKLDGEAPEVALGIYEHYLPRFAGDELPTTDIGRLTGIADKLDNICATFSRG 501 Query: 494 EKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----------------DQNLILF 537 P+GS+DPYALRR LGII I+L+ + L + I + F Sbjct: 502 LAPTGSQDPYALRRQALGIINILLDGNYHVSLYKVIAGALYLLNIPAEDTKKLVPQIAEF 561 Query: 538 FHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 RL+ L D+ IR+D+++A+L + ND+ +V K LN F +SA+ + +A R+ Sbjct: 562 MKQRLRNMLMDQGIRYDVVDAVLADQMNDDFTDLVARAKALNSFVASAEAPALIQAATRV 621 Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 + E+++ I+PQ +EAE L+ + + Y + Sbjct: 622 ANLCKKIEEES-----AINPQLFAVEAEGALHNAAMAASKEVLVAATKYDYAAVMAEAVK 676 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + +PI FF+ V+V +D V++NRL+LL +K+I V ++ IV Sbjct: 677 LVDPINKFFEDVMVMDEDVRVKNNRLALLAAVKDITHAVGDLSVIV 722 >gi|126700048|ref|YP_001088945.1| glycyl-tRNA synthetase subunit beta [Clostridium difficile 630] gi|122973600|sp|Q182B8|SYGB_CLOD6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|115251485|emb|CAJ69318.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Clostridium difficile] Length = 688 Score = 573 bits (1478), Expect = e-161, Method: Composition-based stats. Identities = 220/728 (30%), Positives = 357/728 (49%), Gaps = 68/728 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + EE GP K GF++S GL K K + A Sbjct: 61 SDRQNDLEEEIKGPAKKIAVDAENNLTKPALGFIKSKGLSESD--IYFKQVGKEEYIFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +++ + +VLK I+P I+ V +PK+MRW + RP++ I+ +L Sbjct: 119 IKQDGKETSEVLKDILPETIKSVVFPKAMRWG-----GKNLKFARPIRWIVALL-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 169 DKVLEFDLEGIISSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIRKQC 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ F Sbjct: 229 IEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L FI V N + + GN +V+ ARL DAL F++ D Sbjct: 289 L-KEGKLLPNFIAVRNGDS-YRIDNVKAGNEKVLEARLADALFFYREDT----------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVAL 410 + L+ + +L VVF K+GT ++ R+ L I + + Sbjct: 336 ---------KRNLESYIEKLKT--VVFQVKLGTIYDKTLRLEKLSADILDSLGLVDEKTD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH PR + +P Sbjct: 385 TIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLPRFAGDILPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S+ADKLD++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ + + IE Sbjct: 445 TNAGVALSIADKLDSIAGFFAIGIQPTGSQDPYALRRQALGILSILMDRKVAVDIKVLIE 504 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + ++ FF++R+K D IR+D+++A+L + +++ + Sbjct: 505 HALDNYSELDFDKEEVVEQIMNFFNERVKNLFKDLGIRYDVVDAVLSSDINDVSDMHMRA 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 LN + + + L + R+ + E S +I L +AE +LY Sbjct: 565 LELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEIKLYNEFKQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + E + K+Y D S+ ++ FD V+V +D +++NRL+LL+ + + +L Sbjct: 619 KIKVNELLKDKKYGIALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALLKQVYDTMLE 678 Query: 695 VINVQKIV 702 + ++ KIV Sbjct: 679 ICDLSKIV 686 >gi|332991514|gb|AEF01569.1| glycyl-tRNA synthetase subunit beta [Alteromonas sp. SN2] Length = 692 Score = 573 bits (1477), Expect = e-161, Method: Composition-based stats. Identities = 207/721 (28%), Positives = 349/721 (48%), Gaps = 58/721 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + E + L + + ++ + P RL +Y+ L+ Sbjct: 5 NCLIELGTEELPPKALKSLGEAFAQQFEAALTAAELSFTSVSWFAAPRRLAVYVSALAES 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 65 QADKTVEKRGPAVSAAFDTDGNPTKAAQGWARGNGISVEDAERLVTD--KGEWLLHKAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + I ++L +++ AI K+P PK+MRW + +IRP+ ++ + +E + Sbjct: 123 PGKQIGELLASLLNQAIAKLPIPKAMRWGNYTT-----QFIRPVHTLTALYGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++L + G GHRFH ++ D+Y LE V+ D R++ + Sbjct: 173 VNLTALGLASGRTIQGHRFHGEARFELDHADNYASALEAHYVVADFTARKDKVRQQLQTA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A+ L+ ++DLLEEI LVEW V SF++ +L +P+E + T+K +QK Sbjct: 233 ADALSLKPDFNEDLLEEIASLVEWPVVMQASFEEGFLAVPKEALIYTMKDDQKYVPLLDS 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L+N F+ VSNI++ D + GN +V+ RL DA F+ D+ Sbjct: 293 EGQLSNTFLFVSNIESQDPIQV-ISGNEKVIRPRLADAEFFFNSDK-------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+A L+ V+F ++GT E+ RI L IA IDA+ AL RA Sbjct: 338 ------KTSLESRLASLE--SVLFQKQLGTLKEKSERISSLSGFIASQIDANEALAARAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL T +V EFP++QG +GK YA+ E+ + +A+ E PR + +P+ +S Sbjct: 390 LLAKTDLMTNMVMEFPDVQGVMGKYYALNDGEDAAVAEALYEQYMPRFAGDALPSPGVSA 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LADKLDTL+ + I + P G KDP+ALRRA +G++RII E + + L + Sbjct: 450 AVALADKLDTLVGIFGIGQLPKGDKDPFALRRAAIGVLRIITELSLPLDLEVLVAKAGEV 509 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ F R L D+ I D+I+A+ V + + EF Sbjct: 510 YGDKLSNQDFQAQVVDFVLARFVAVLQDQGIAIDVIQAVSARRPTQPSDYVARVNAVAEF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA + + ++ I L +AEK LY+ + + + Sbjct: 570 KQLEEAQALAAANKRVANILAK-QGVDSSVNASIDESLLSEDAEKALYSALMSAESVVTS 628 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + Y +I + ++ I+ FFD V+V +D V+ NRL+LL ++ + L ++ Sbjct: 629 AVTTQDYTKILSTMATLRSAIDSFFDDVMVMAEDDAVKQNRLALLSLLRQLFLTTADISL 688 Query: 701 I 701 + Sbjct: 689 L 689 >gi|149184489|ref|ZP_01862807.1| glycyl-tRNA synthetase beta subunit [Erythrobacter sp. SD-21] gi|148831809|gb|EDL50242.1| glycyl-tRNA synthetase beta subunit [Erythrobacter sp. SD-21] Length = 736 Score = 573 bits (1477), Expect = e-161, Method: Composition-based stats. Identities = 253/763 (33%), Positives = 376/763 (49%), Gaps = 91/763 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SE+IPARMQ A +L + ++ GV + + TP RL L + L Sbjct: 1 MSDFLLELRSEDIPARMQTGARGELEKLFRREMEAAGVTTGEITVWSTPRRLALIARDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GP VGA +A+DGF R G+ S ++ K Y AV P R Sbjct: 61 EATEAVSEELKGPPVGAPDQALDGFCRKAGVDKGSLET--REVKGRATYFAVKNIPGRAT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +D+L +P I+ WPKSMRW + W+RPL I+ +L + +++ ++ Sbjct: 119 KDLLAKAIPAIIRDFSWPKSMRWGAASISTESLRWVRPLSGIVALL-----GDDVVECEV 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G +T GHRFH I + + D Y L V++D E R++ I + A ++A+ VG Sbjct: 174 HGVTSGAVTLGHRFHHSGDITIGNADDYAMKLRAGHVIVDHEERQDLIRSGAAKVATEVG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L+LVED+ L+ E GL EW +G F++ +L +P E I+LT + NQK FV G LA Sbjct: 234 LKLVEDEGLVIENAGLTEWPVPLLGRFEEDFLEVPPETIQLTARVNQKYFVCENEAGELA 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FI +NI+A DGGA +V GN +V+AARL DA FW D+ Sbjct: 294 NAFICTANIEAEDGGARVVDGNRKVLAARLSDARFFWNVDR------------------- 334 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVALVDRAIVL 417 K L L+ + FH K+GT ++V R+ L + + + DAD + ++A L Sbjct: 335 -KKTLAVHAKGLER--ITFHEKLGTVADKVDRVAKLARWLVEEGIVKDADPDMAEQAARL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TE+V EFPELQG +G YA + + DAI +H KP G + VPT +++ V Sbjct: 392 AKADLVTEMVGEFPELQGLMGGYYARAEGLPDAVADAIRDHYKPVGQDDEVPTAPVTVAV 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS----------- 526 SLADKLDTL++F+ I E+P+GSKDP+ALRRA LG I +IL+NK+ I + Sbjct: 452 SLADKLDTLVSFFVIKERPTGSKDPFALRRAALGAIELILQNKLRIEIDYATAKAANRVF 511 Query: 527 -----------------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAI--LRPENDNL 567 + + FF DRLK+ D +RHDLI+A+ L D + Sbjct: 512 RQHENREDHDAWFTEQNNAELYRAVPDFFVDRLKVQQRDAGVRHDLIDAVFGLAERKDEI 571 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI----SLEISPQYLL--- 620 + + + L F + G L KR IL E+ E + E P L+ Sbjct: 572 VGNLARVHALQSFMDTEDGANLLAGYKRAANILKKEDWHGIEGEIARTGEEDPLALVDDP 631 Query: 621 ----------------------LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 AE+ L ++ ++++ + + L ++ Sbjct: 632 DMRAVVEAKMAERHAKELSYAPEPAEQALMDALATSEPAAAKAIEAEDFSAAMAALAALR 691 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FFD+V VN ++ R +RL LL + + V + +I Sbjct: 692 APIDRFFDEVTVNAEEENKRAHRLDLLARFRAAVHKVADFSRI 734 >gi|255101590|ref|ZP_05330567.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-63q42] Length = 688 Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 221/728 (30%), Positives = 358/728 (49%), Gaps = 68/728 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + EE GP K GF++S GL K K + A Sbjct: 61 SDRQNDLEEEIKGPAKKIAVDAENNLTKPALGFIKSKGLSESD--IYFKQVGKEEYIFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +++ + +VLK I+P I+ V +PK+MRW + RP++ I+ +L Sbjct: 119 IKQDGKETSEVLKDILPETIKSVVFPKAMRWG-----GKNLKFARPIRWIVTLL-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 169 DKVLEFDLEGIISSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIRKQC 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ F Sbjct: 229 IEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L FI V N + + GN +V+ ARL DAL F++ D Sbjct: 289 L-KEGKLLPNFIAVRNGDS-YRIDNVKAGNEKVLEARLADALFFYREDT----------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVAL 410 + L+ + +L VVF K+GT ++ R+ L I + + A Sbjct: 336 ---------KRNLESYIEKLKT--VVFQVKLGTIYDKTLRLEKLSADILDSLGLVDEKAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH PR + +P Sbjct: 385 TIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLPRFAGDILPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S+ADKLD++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ + + IE Sbjct: 445 TNAGVALSIADKLDSIAGFFAIGIQPTGSQDPYALRRQALGILSILMDRKVAVDIKVLIE 504 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + ++ FF++R+K D IR+D+++A+L + +++ + Sbjct: 505 HALDNYSELDFNKEEVVEQIMSFFNERVKNLFKDLGIRYDVVDAVLSSDINDVSDMHMRA 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 LN + + + L + R+ + E S +I L +AE +LY Sbjct: 565 LELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEIKLYNEFKQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + E + K+Y D S+ ++ FD V+V +D +++NRL+LL+ + + +L Sbjct: 619 KVKVNELLKDKKYGIALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALLKQVYDTMLE 678 Query: 695 VINVQKIV 702 + ++ KIV Sbjct: 679 ICDLSKIV 686 >gi|254976024|ref|ZP_05272496.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-66c26] gi|255093412|ref|ZP_05322890.1| glycyl-tRNA synthetase beta chain [Clostridium difficile CIP 107932] gi|255315157|ref|ZP_05356740.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-76w55] gi|255517826|ref|ZP_05385502.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-97b34] gi|255650942|ref|ZP_05397844.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-37x79] gi|260684012|ref|YP_003215297.1| glycyl-tRNA synthetase subunit beta [Clostridium difficile CD196] gi|260687672|ref|YP_003218806.1| glycyl-tRNA synthetase subunit beta [Clostridium difficile R20291] gi|306520822|ref|ZP_07407169.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-32g58] gi|260210175|emb|CBA64364.1| glycyl-tRNA synthetase beta chain [Clostridium difficile CD196] gi|260213689|emb|CBE05557.1| glycyl-tRNA synthetase beta chain [Clostridium difficile R20291] Length = 688 Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 222/728 (30%), Positives = 358/728 (49%), Gaps = 68/728 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + EE GP K GF++S GL K K + A Sbjct: 61 SDRQSDLEEEIKGPAKKIAVDAENNLTKPALGFIKSKGLSESD--IYFKQVGKEEYIFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +++ + +VLK I+P I+ V +PK+MRW + RP++ I+ +L Sbjct: 119 IKQDGKETSEVLKDILPETIKSVVFPKAMRWG-----GKNLKFARPIRWIVALL-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 169 DKVLEFDLEGIISSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIRKQC 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ F Sbjct: 229 IEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L FI V N + + GN +V+ ARL DAL F++ D Sbjct: 289 L-KEGKLLPNFIAVRNGDS-YRIDNVKAGNEKVLEARLADALFFYREDT----------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVAL 410 + L+ + +L VVF K+GT ++ R+ L I + + A Sbjct: 336 ---------KRNLESYIEKLKT--VVFQVKLGTIYDKTLRLEKLSADILDSLGLVDEKAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH PR + +P Sbjct: 385 TIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLPRFAGDILPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S+ADKLD++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ + + IE Sbjct: 445 TNAGVALSIADKLDSIAGFFAIGIQPTGSQDPYALRRQALGILSILMDRKVAVDIKVLIE 504 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + ++ FF++R+K D IR+D+++A+L + +++ + Sbjct: 505 HALDNYSELDFNKEEVVEQIMNFFNERVKNLFKDLGIRYDVVDAVLSSDINDVSDMHMRA 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 LN + + + L + R+ + E S +I L +AE RLY Sbjct: 565 LELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEIRLYNEFKQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + E + K+Y D S+ ++ FD V+V +D +++NRL+LL+ + + +L Sbjct: 619 KVKVNELLKDKKYGIALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALLKQVYDTMLE 678 Query: 695 VINVQKIV 702 + ++ KIV Sbjct: 679 ICDLSKIV 686 >gi|126172269|ref|YP_001048418.1| glycyl-tRNA synthetase subunit beta [Shewanella baltica OS155] gi|166227924|sp|A3CYI6|SYGB_SHEB5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|125995474|gb|ABN59549.1| Glycine--tRNA ligase [Shewanella baltica OS155] Length = 689 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 213/722 (29%), Positives = 343/722 (47%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANLTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKNLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLTDLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ Sbjct: 293 DAGKLLPNFIFVTNIESKD-PAQIISGNEKVVRPRLADAEFFFNTDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 339 -------KHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KPR + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPRFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLITKAQA 509 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINASLLTEAAEQALAAKLNELQPLLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|89256651|ref|YP_514013.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. holarctica LVS] gi|115315064|ref|YP_763787.1| glycine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|156502794|ref|YP_001428859.1| glycyl-tRNA synthetase, subunit beta [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367963|ref|ZP_04983983.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. holarctica 257] gi|89144482|emb|CAJ79789.1| Glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. holarctica LVS] gi|115129963|gb|ABI83150.1| glycine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|134253773|gb|EBA52867.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. holarctica 257] gi|156253397|gb|ABU61903.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica FTNF002-00] Length = 694 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 205/727 (28%), Positives = 371/727 (51%), Gaps = 65/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVA--TPKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P K MRW + S+ ++RP+ +L + + + Sbjct: 124 SGQATVNLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLALYGND-----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSK-KPELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDF 634 +F++S K + + S KR+ I++ K + + + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANIIS---KNATDKDYYYNIELAKAAANEYELALAYSIEEV 627 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + Sbjct: 628 AADLHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVNLHKMFIG 687 Query: 695 VINVQKI 701 + ++ K+ Sbjct: 688 IADISKL 694 >gi|255656411|ref|ZP_05401820.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-23m63] gi|296450142|ref|ZP_06891903.1| glycyl-tRNA synthetase beta subunit [Clostridium difficile NAP08] gi|296878523|ref|ZP_06902528.1| glycyl-tRNA synthetase beta subunit [Clostridium difficile NAP07] gi|296260905|gb|EFH07739.1| glycyl-tRNA synthetase beta subunit [Clostridium difficile NAP08] gi|296430330|gb|EFH16172.1| glycyl-tRNA synthetase beta subunit [Clostridium difficile NAP07] Length = 688 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 220/728 (30%), Positives = 360/728 (49%), Gaps = 68/728 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + EE GP K GF++S GL K K + A Sbjct: 61 SDRQSDLEEEIKGPAKKIAVDAENNLTKPALGFIKSKGLSESD--IYFKQVGKDEYIFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +++ + +VLK I+P I+ V +PK+MRW + RP++ I+ +L Sbjct: 119 IKQDGKETSEVLKDILPDTIKSVVFPKAMRWG-----GKNLKFARPIRWIVTLL-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 169 DKVLEFDLEGIVSSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIRKQC 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ F Sbjct: 229 IEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L FI V N + + GN +V+ ARL DAL F++ D Sbjct: 289 L-KEGKLLPNFIAVRNGDS-YRIDNVKAGNEKVLEARLADALFFYREDT----------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVAL 410 + L+ + +L VVF K+GT ++ R+ L I + + A Sbjct: 336 ---------KRNLESYIEKLKT--VVFQVKLGTIYDKTLRLEKLSADILDSLGLVDEKAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH PR + +P Sbjct: 385 TIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLPRFAGDILPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S+ADKLD+++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ + + IE Sbjct: 445 TNAGVALSIADKLDSIVGFFAIGIQPTGSQDPYALRRQALGILSILMDRKVAVDIKVLIE 504 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + ++ FF++R+K D IR+D+++A+L + +++ + Sbjct: 505 HALDNYSELDFNREEVVEQIMNFFNERVKNLFKDLGIRYDVVDAVLSSDINDVSDMHMRA 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 LN + + + L + R+ + E S +I L +AE +LY Sbjct: 565 LELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEIKLYNEFKQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 +++ + K+Y D S+ ++ FD V+V +D +++NRL+LL+ + + +L Sbjct: 619 KVRVKQLLKDKKYGVALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALLKQVYDTMLE 678 Query: 695 VINVQKIV 702 + ++ KIV Sbjct: 679 ICDLSKIV 686 >gi|218247137|ref|YP_002372508.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 8801] gi|257060208|ref|YP_003138096.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 8802] gi|218167615|gb|ACK66352.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 8801] gi|256590374|gb|ACV01261.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 8802] Length = 711 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 199/738 (26%), Positives = 338/738 (45%), Gaps = 70/738 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ +EE+PA + A + L+E + ++ Y TP RL + ++GL+ H Sbjct: 3 FLLEVGTEELPADFLNGAIAQWQERIPASLQEHFLTPNSITVYGTPRRLAVLIEGLADHQ 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP G KA +GF R + + + KGD + Sbjct: 63 SDRTEVIKGPPAAAAFKDGQPTKAAEGFARKQAVDVATLEI--RPTDKGDFVFIEKKIAG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R + +L+ ++P I + + MRW + RP++ ++ + E ++I+ Sbjct: 121 RPTKAILQELIPSWINGLEGRRFMRWGDGD-----LRFPRPIRWLVTLCDGEVLPLELIN 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 I ++YGHR P P+ + Y L+ V +DP RR I +A Sbjct: 176 GS-TTIISDRVSYGHRILHPEPVSIPHGSEYRETLQSVYVEVDPHERRQTIEAGVKAVAQ 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +G +LL+E+ LVE+ G FD+++L LP E+I + T+Q+ F + ++G Sbjct: 235 TLGGTAEIYPELLQEVTNLVEYPTAVPGKFDEEFLELPTEVITTVMVTHQRYFAVKDQQG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI +SN I GN RV+ ARL DA F+ D Sbjct: 295 SLLPNFITISNGD-RTKSEIIAAGNQRVIRARLADAQFFYHAD----------------- 336 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDRA 414 S+PLD + +L+ V F ++GT ++V RI + ++IAQ ++ ++ Sbjct: 337 ---CSEPLDTYLPQLET--VTFQNELGTMRDKVDRIMEIAQQIAQQLNLTPQQWDEIEST 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L K DL T++V EFPELQG +G++YA++ E+ S I EH PRG + +P + Sbjct: 392 AMLCKVDLVTQMVYEFPELQGIMGQKYALVSGESESVAQGIFEHYLPRGADDIMPQSLTG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V LAD+LDTLI+ + + P+GS DP+ALRRA +I I +++ I L+Q + Sbjct: 452 QVVGLADRLDTLISIFGLGMIPTGSSDPFALRRAANAVINITWNSQLSINLAQLLAQGCA 511 Query: 532 -------------QNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLLT 569 + L FF R++ L + + +DL+ A+L + ++LL Sbjct: 512 DFITGHQDKTSPLEPLKGFFIQRIQTLLQEELKLDYDLVNAVLGDNDPEYQERALEDLLD 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL--EISPQYLLLEAEKRL 627 + D + L E ++ + E+ + R ++ A +E+ ++PQ +E Sbjct: 572 VRDRAQFLQEIRNNGQLERIYETVNRSTRLAAQGNLGFQELDPRKTVNPQLFQQRSENAF 631 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVRDNRLSL 684 Y + + + Y + + L I + FF D VLV +D ++R NRL+L Sbjct: 632 YQELIVLLPETLAAKSQRNYQLLVNGLTEIAPTVSNFFDGEDSVLVMDEDPKIRQNRLNL 691 Query: 685 LQYIKNIILIVINVQKIV 702 L ++N + + IV Sbjct: 692 LGILRNHSRTLADFGAIV 709 >gi|302879305|ref|YP_003847869.1| glycyl-tRNA synthetase, beta subunit [Gallionella capsiferriformans ES-2] gi|302582094|gb|ADL56105.1| glycyl-tRNA synthetase, beta subunit [Gallionella capsiferriformans ES-2] Length = 703 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 206/732 (28%), Positives = 341/732 (46%), Gaps = 62/732 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYL 56 M + L+E++ EE+P + K E S +L L + + + + +P RL +++ Sbjct: 1 MSTKNLLVELFVEELPPKSLKKLGESFSQVLSASLVAQNLVLPGTEITSFASPRRLAVHV 60 Query: 57 KGLSPHSPEKIEERL-GP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDV 108 +G+ + +K P G A+ L G ++ + K + Sbjct: 61 EGVIAQAADKSVSLKLMPVKVGLDAAGNATPALLKKLAGLGADVSVVSSLRTEMDGKAEA 120 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS-PISAFSWIRPLKSILCILV 167 P + D L+ + A+ K+P + M + S +++RP S++ + Sbjct: 121 LYFDSLVPGVKLVDGLQRALNDALAKLPIARVMTYPDPTGDGWSTVNFVRPAHSLVALY- 179 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRR 225 KI+ + + + GN+T GHRF A I ++ D Y R LE V+ RR Sbjct: 180 ----GRKIVPVSVLGLTAGNVTQGHRFEASVDAIVLEDADSYARQLETEGAVIASFAQRR 235 Query: 226 NAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 I+ ++A+ GL+ + D DLL+E+ LVE V MG F++ YL +P E + LT+K Sbjct: 236 AEIVRQLAKMAAKEGLQAIHDDDLLDEVTALVERPNVLMGRFEETYLEVPPECLILTMKA 295 Query: 286 NQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 NQK F G L+N F++VSNI D + ++ GN RVV RL DA F+ +D+ Sbjct: 296 NQKYFPLLEVSGRLSNKFLIVSNISPKDA-SLVIGGNERVVRPRLADAKFFFDQDR---- 350 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 KPLD R+ L + VV+H K+GTQGERV R++ + + I + Sbjct: 351 ----------------KKPLDARV--LGLSRVVYHNKLGTQGERVERVQAIARAIGMQLG 392 Query: 406 ADVALVDRAIVLSKADLC--TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + + A T++V EFPELQG +G+ YA AIE+H KPR Sbjct: 393 GEAQALQADQAALLAKADLLTDMVGEFPELQGIMGRYYAQHDGLTDEVAFAIEDHYKPRF 452 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 + +P N I V+LADKL+TL+ + I + P+G +DP+ALRR LG+IR+++E ++ + Sbjct: 453 AGDTLPRNSTGICVALADKLETLVGMFGIGQIPTGDRDPFALRRHALGVIRMLVEKQLPL 512 Query: 524 PLSQF--------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 L+ + F DR+ + ++ + ++A+L P L Sbjct: 513 TLTDLVAGAFAGFSKGLLADAQAEVETFIFDRIGGMMREQGYTANQVDAVLAPRPQRLSE 572 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I + + F + + + KR+ IL K E+S+E+ L+ +AE LY Sbjct: 573 IPMRLDAVRAFAALPESAALAAANKRVGNILK---KVEGEVSVEVDRARLVEDAELALYQ 629 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + Y L ++ P++ FFD V+VN DD +R NRLSLL + Sbjct: 630 ALQSIATDADAAFAAGDYTTSLQALAALRAPVDAFFDSVMVNADDPALRANRLSLLARLH 689 Query: 690 NIILIVINVQKI 701 + V ++ ++ Sbjct: 690 QAMNRVADLSRL 701 >gi|317128323|ref|YP_004094605.1| glycyl-tRNA synthetase subunit beta [Bacillus cellulosilyticus DSM 2522] gi|315473271|gb|ADU29874.1| glycyl-tRNA synthetase, beta subunit [Bacillus cellulosilyticus DSM 2522] Length = 700 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 345/733 (47%), Gaps = 71/733 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M FL EI EE+PAR A L+ + L + + Y+ +++Y TP RL + + G Sbjct: 3 MSKQTFLFEIGLEEMPARFVTTAMNQLAEKVEKWLLDNRLNYEAVQRYSTPRRLAIKING 62 Query: 59 LSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L + EE GP G KA +GF R G+ K+ K + Sbjct: 63 LDDRQADIEEEAKGPSKKIAQDADGNWTKAAEGFARGQGVSVSD--LFFKEIKGEEYVFV 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++L+ + VAI + +PK+MRW + F ++RP+K ++ + +E Sbjct: 121 NKFMKGTATNELLQDLKEVAI-SLQFPKNMRWGSLQ-----FRYVRPIKWLVALYGSE-- 172 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I ++ +P N+TYGHRF I + + Y L V+ DPE R+ AI + Sbjct: 173 ---VIPFEIAHVPSSNVTYGHRFLG-EEITLSEANEYENLLLSQYVIADPEQRKEAIRSQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + G + D+DLLEEI LVE+ +G+FD+++L +P +++ +++ +Q+ F Sbjct: 229 VKYIGEQEGYVIPVDEDLLEEINNLVEYPTSLIGNFDERFLMVPSDVLITSMREHQRYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L FI V N + +GN +V+ ARL DA F++ D Sbjct: 289 VKDSNGNLLPHFITVRNGDHRH-LENVQKGNEKVLRARLADAEFFYEED----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L +PLD + RL+ +V+H ++G+ G++V RI+ L A+ + + Sbjct: 337 ---------LKQPLDANLERLE--SIVYHEELGSIGDKVRRIQGLATTFAEWNGLNEEEL 385 Query: 412 D---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 R LSKADL T +V EFPEL+G++G+EYA E+ I EH P+ + + Sbjct: 386 KTVLRVAQLSKADLVTHMVGEFPELEGRMGEEYARKSGEDEKVAQGIYEHYLPKQAGDQL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + VS+ADK+DT++ ++I P+GS+DP+ LRR T G+I+I L NK I + Sbjct: 446 PKTSVGALVSVADKVDTIVTSFSIGLIPTGSQDPHGLRRQTAGVIQIFLANKWKINVLDV 505 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ + L+ F R+K L D+ IR+D+++A++ + + T Sbjct: 506 FKEALQLAEKHGLLKRDKETVLEELVEFIKLRVKNILQDKGIRYDIVDAVMNTDIGEITT 565 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 +VD L + +K + + R+ I +K ++++ +AEK L+ Sbjct: 566 LVDKANVLQSKINETSFKKLVEAFSRVTNI---AKKAKDNQHMDVNDSLFTEKAEKDLFK 622 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + + + + D L + I +FD V+V DD ++ NRL+ + Sbjct: 623 MNAAVSKQMNDLLKSGNVEAAFDELKQLEPYIHDYFDHVMVMTDDTALKTNRLNQMNEAA 682 Query: 690 NIILIVINVQKIV 702 +I Q IV Sbjct: 683 KLITQFAEFQSIV 695 >gi|308069925|ref|YP_003871530.1| glycyl-tRNA synthetase subunit beta [Paenibacillus polymyxa E681] gi|305859204|gb|ADM70992.1| Glycyl-tRNA synthetase beta chain (Glycine--tRNA ligase beta chain) [Paenibacillus polymyxa E681] Length = 691 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 201/733 (27%), Positives = 336/733 (45%), Gaps = 74/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI EE+PAR A + L + L + Y + Y TP RL + +K + Sbjct: 1 MSKDLLFEIGLEEVPARFIPNAIQQLKQRMTAWLDSSRIAYGAVEAYATPRRLAVLVKDV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF RS G+ K+ + A Sbjct: 61 AEKQEDINEEVKGPSRKIALDEAGNWSKAALGFARSQGVDPEQ--FTFKELGGVEYIYAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 DVL + + + +PK MRW++ F ++RP++ ++ + + Sbjct: 119 KSSIGVPTADVLSEGLLHILHAMTFPKFMRWASYD-----FKFVRPIRWLIALFGGD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I++L++ + GN+T GHRF + V+S Y+ L + V+++ E R++ I+ Sbjct: 171 --IVNLEIAGVQSGNVTRGHRFLGQDAV-VESPADYVEVLRKQHVIVNIEERQSLIVKQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ + DLLEE++ LVE V G FD +L +P++++ +++ +Q+ F Sbjct: 228 EALAAEKDWTIAVKDDLLEEVLYLVETPTVLFGGFDPAFLNIPKDVLITSMREHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R G L F+ V N + I +GN +V+ ARL DA F++ DQ Sbjct: 288 LDRTGELLPYFVTVRNGGS-QSLEVIAKGNEKVLRARLSDAKFFYEEDQK---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L+ + A + +VFH ++GT G++V RIR + +A+ + + Sbjct: 337 ------------LEIKDALSKLESIVFHEELGTVGDKVRRIRRIADALAEKLRVSPDTQE 384 Query: 413 ---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA + K DL T++V EFPELQG +G++YA E A+ EH +PR E VP Sbjct: 385 SVSRAADICKFDLVTQMVYEFPELQGVMGEDYARKAGEREEVARAVFEHYQPRFAGETVP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + VS+ADK+DT+ ++I P+GS+DPYALRR GI++I+L+ K+ LS Sbjct: 445 STNAGAIVSIADKIDTITGCFSIGIIPTGSQDPYALRRQAAGIVQILLDRKLSATLSDVF 504 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + L FF R+K L + +R+D+++A+L D++ ++ Sbjct: 505 NIALEVHGNLGNMKRSADEIRKELHEFFGLRVKKLLSE-TLRYDVVDAVLAAGYDDVASV 563 Query: 571 VDLIKHLNEFFSSAK-GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 V+ L + + + + S R+ + A + ++ + EK LY Sbjct: 564 VNRGTALMTAIQTGEVFKATVESFNRVGNLAAKA------VHKSVNTSEFTEQGEKTLYE 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++ + L SI + FFD V+V +D VR+NRL+LL I Sbjct: 618 AWHSAYESYSVALQEGDATRALALASSITPAVTAFFDSVMVMAEDDAVRNNRLALLAAID 677 Query: 690 NIILIVINVQKIV 702 + + + K+V Sbjct: 678 SELKRFADFSKLV 690 >gi|251796251|ref|YP_003010982.1| glycyl-tRNA synthetase subunit beta [Paenibacillus sp. JDR-2] gi|247543877|gb|ACT00896.1| glycyl-tRNA synthetase, beta subunit [Paenibacillus sp. JDR-2] Length = 693 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 205/734 (27%), Positives = 335/734 (45%), Gaps = 74/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PAR A L + + + Y ++ + TP RL LY+KG+ Sbjct: 1 MAKDLLLEIGLEEVPARFVRGAMNQLKEKAVKWFDDSRIPYDSVEVFATPRRLALYVKGV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E+ GP G KA GF RS G+ ++ + A Sbjct: 61 AEKQEDVSEQVKGPSRKIALDDQGNWSKAALGFARSQGVDPEQ--FFFQELAGVEYVYAN 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 VL + I + +PK+MRW + ++RP+K I+ + E Sbjct: 119 KSSVGTETASVLPEGLTNLITSMSFPKNMRWGSYE-----LKFVRPIKWIIALFGQE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 II +++ + GN++ GHRF + V S Y L + V++D E R I+ Sbjct: 171 --IIPIEITNVKSGNVSRGHRFLGEETV-VASPADYKERLRQQHVIVDVEEREQLIVAQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA E+ +DLLEE++ LVE+ V G+FD +L +P+E++ +++ +Q+ F Sbjct: 228 QELAKEKNWEIAIKEDLLEEVLFLVEYPNVLYGTFDPAFLNIPQEVLITSMREHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L F+ V N + +GN +V+ ARL DA F++ DQ N Sbjct: 288 LNAEGQLQPFFVTVRNGD-RTSIENVAKGNEKVLRARLSDAKFFYEEDQKLAIN------ 340 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 +A+L+ ++V+H ++GT ++V RIR IA + AD Sbjct: 341 --------------DALAKLE--NIVYHEELGTVADKVRRIRATTDLIASRLGADTDTAA 384 Query: 413 RAIV---LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 A + K DL T++V EFPELQG +G++YA E+ + AI EH +PR + P Sbjct: 385 AASRAADICKFDLVTQMVYEFPELQGIMGEDYARKAGESEAVAKAINEHYQPRFAGDRAP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + VSLADK+DT+ ++I P+GS+DPYALRR GI++IIL +D+ L+ Sbjct: 445 ASLEGAIVSLADKMDTIAGCFSIGIIPTGSQDPYALRRQASGIVQIILAQGLDLKLTDLF 504 Query: 530 E------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 E ++L FF R+K L ++ R+D+++A++ ++L V Sbjct: 505 EAALEVHEARGMKRGADEIRKDLNDFFALRVKNVLSEQANRYDVVDAVMATGFNDLRITV 564 Query: 572 DLIKHLNEFFS---SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + +N+ S ++ + + + R+ + + E S + AE LY Sbjct: 565 ERAALINDLSSGSERSEFKLTIDAFNRVCNLASKAE------SRTVDSALFEEAAEGALY 618 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++ L S+ + I +FD V+V D VR NRL+ L I Sbjct: 619 EQWQKAHPAVAAAIAEGDIASALANLSSLKQAINAYFDSVMVMAKDDAVRSNRLATLSLI 678 Query: 689 KNIILIVINVQKIV 702 + I + + K+V Sbjct: 679 ADDITAIADFSKLV 692 >gi|319761352|ref|YP_004125289.1| glycyl-tRNA synthetase, beta subunit [Alicycliphilus denitrificans BC] gi|317115913|gb|ADU98401.1| glycyl-tRNA synthetase, beta subunit [Alicycliphilus denitrificans BC] Length = 721 Score = 571 bits (1473), Expect = e-160, Method: Composition-based stats. Identities = 206/747 (27%), Positives = 349/747 (46%), Gaps = 79/747 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K + + +L L +G+ + Y +P RL +++G+ Sbjct: 5 SNLLVELFVEELPPKALQKLGDAFAGVLRDQLVAQGLAAAGAPLTAYASPRRLAAHIEGV 64 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLA 111 +P+K + ++L P G A+ L + G + +K+ K +V Sbjct: 65 LAQAPDKAVSQKLMPVAVGLAADGQPTPALLKKLSALGADASAVAGLKRVHDGKAEVLYY 124 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + L+ + AI ++P PK MR+ ++ ++RP ++ + A Sbjct: 125 ESTAQGATLAQGLQKALDEAIARLPIPKVMRYQLEDG-WTSVHFVRPAHGLVALHGAG-- 181 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAIL 229 ++ + + + GN T GHRF A P+ ++ D Y L V+ RR I+ Sbjct: 182 ---VVPVAVLGLAAGNATQGHRFEAAVQPVVLRDADSYAEQLRAQGAVIAGFAERRAEIV 238 Query: 230 NDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 A +G +ED LL+E+ LVE V + F++++L +P+E + LT+K NQ Sbjct: 239 RQLRAAAEKLGGGVRPIEDDALLDEVTALVERPNVLVCQFEREFLAVPQECLILTMKANQ 298 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 K F EG L + F++VSNI D GA +QGN RVV RL DA F+ +D+ Sbjct: 299 KYFPLLDAEGRLTHRFLVVSNISPQDAGAV-IQGNERVVRPRLADAKFFFDQDR------ 351 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI--- 404 K L R+A+L VV+H ++G+QGERV R+R + K I Q + Sbjct: 352 --------------KKTLASRVAQLS--KVVYHNQLGSQGERVERVRAIAKAIGQQLFAA 395 Query: 405 -----------------DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNE 447 D + VD A +L+K DL T++V EFPELQG +G YAV Sbjct: 396 LAERHELQGTQDGEIAQDWLLTCVDNAALLAKTDLVTDMVGEFPELQGIMGGYYAVNDGL 455 Query: 448 NISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRR 507 AIE+H KPR + +P + + V+LADK++TL+ + I P+G +DP+ALRR Sbjct: 456 PDEVAHAIEDHYKPRFAGDELPRESVGLVVALADKIETLVGMFGIGNLPTGDRDPFALRR 515 Query: 508 ATLGIIRIILENKIDIPLSQFIE-------------DQNLILFFHDRLKLYLHDRDIRHD 554 LG+IR+++E + + L + L F +DRL L ++ Sbjct: 516 HALGVIRMLMEKDLPLDLGALLAGAVPAFAGRIDDPSALLADFIYDRLAGALREQGYSSQ 575 Query: 555 LIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI 614 ++A+L L + + + F + + + + KR+ IL K ++ + Sbjct: 576 EVDAVLALRPQRLALVEKQLAAVRAFSALPESQALAAANKRVSNILK---KAGGDVHAHV 632 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 +P+ L +AE+ LYA + F + Y L + P++ FFD V+VN + Sbjct: 633 NPELLREQAEQDLYAALQRFVPEADAQFERGDYTASLQTLAVLRAPVDAFFDDVMVNAEQ 692 Query: 675 REVRDNRLSLLQYIKNIILIVINVQKI 701 ++R NRL LL+ + + V ++ ++ Sbjct: 693 LDLRLNRLGLLKTLHEAMNRVADLSRL 719 >gi|304412716|ref|ZP_07394319.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS183] gi|307305819|ref|ZP_07585565.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica BA175] gi|304348926|gb|EFM13341.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS183] gi|306911312|gb|EFN41738.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica BA175] Length = 689 Score = 571 bits (1473), Expect = e-160, Method: Composition-based stats. Identities = 211/722 (29%), Positives = 341/722 (47%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELAKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELVHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ Sbjct: 293 DAGKLLPNFIFVTNIESKD-PAQIISGNEKVVRPRLADAEFFFNTDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 339 -------KHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLIAKAQA 509 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINASLLTEAAEQALAAKLNELQPLLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|224824601|ref|ZP_03697708.1| glycyl-tRNA synthetase, beta subunit [Lutiella nitroferrum 2002] gi|224603094|gb|EEG09270.1| glycyl-tRNA synthetase, beta subunit [Lutiella nitroferrum 2002] Length = 686 Score = 571 bits (1473), Expect = e-160, Method: Composition-based stats. Identities = 212/710 (29%), Positives = 347/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + K A + + LK+ + + + +P RL L L + P++ + Sbjct: 15 PPKALPKLAASFAQTITDELKKLQFVAADASAHVFASPRRLALTLPAVLAVQPDQTIVKK 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G A+ GF RS G++ + K DVY K + + VL Sbjct: 75 GPAVAAGMKDGQPTPALAGFARSCGVEVSELSTM--SDGKQDVYAYRSVKAGQPLAAVLS 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV +A++K+P PK MRW + ++RP+ ++ + +E +I ++ + Sbjct: 133 DIVALALKKLPAPKLMRWGDSEH-----QFVRPVHGLVLLHGSE-----LIAGEVLGLKS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 T GHRF + + + D Y R L E V+ E RR I + ++ +G + Sbjct: 183 RRATLGHRFLSAGEVTLPDADSYARVLYEQGKVVASFEARRELIRHRLAEASAKLGAVIA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 ++ L++E+ LVEW V F+ ++L +P+E + LT++ NQK F G L N F+ Sbjct: 243 AEQALVDEVTALVEWPVVLEAGFEAEFLKVPQECLILTMQQNQKYFPLLDAHGKLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN++A+D + I+ GN RV+ ARL DA F+++DQ Sbjct: 303 LVSNLEATD-PSHIIHGNERVLRARLSDAKFFFEQDQ--------------------KVR 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ RL DVV+H KIG+Q ERV R++ L IA + A+V RA L+KADL + Sbjct: 342 LESRLPRL--ADVVYHNKIGSQLERVERLQNLAGTIAGKLGANVDDARRAAYLAKADLVS 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 ++V EFPELQG +G YA E+ + AIE H PR +++P ++++V+LADKL+ Sbjct: 400 DMVGEFPELQGIMGMYYARHDGEHEAVAAAIEGHYHPRFAGDSLPHGPVALSVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI-----------PLSQFIED-- 531 T++ W I P+G KDP+ALRRA LG++R++L+ +D+ P ++ Sbjct: 460 TIVGIWGIGLVPTGDKDPFALRRAALGVLRMVLDTPLDLKQLIVDTHDSFPANKLSASVA 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 + F +RLK +L D + D I+A+L E L + ++ + +F + Sbjct: 520 DEVFAFCLERLKNFLAA-DYKVDEIDAVLALEPTRLDEVRAVLAAVAQFKQLPEAATLAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ IL E + ++P L +AEK LY + + + Sbjct: 579 ANKRVKNILKKAEGEV----GVVNPALLAEDAEKALYGAVQQLAPQVDAQFAAHDFAGAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ P++ FFD V+V DD VR NR++LL + + V ++ + Sbjct: 635 AQLASLKAPVDAFFDGVMVMADDSAVRINRIALLARLAELFNRVADISLL 684 >gi|17231603|ref|NP_488151.1| glycyl-tRNA synthetase subunit beta [Nostoc sp. PCC 7120] gi|25009306|sp|Q8YPT0|SYGB_ANASP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|17133246|dbj|BAB75810.1| glycyl-tRNA synthetase beta chain [Nostoc sp. PCC 7120] Length = 716 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 197/744 (26%), Positives = 325/744 (43%), Gaps = 73/744 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L + +++ Y TP RL + + GL Sbjct: 1 MPGFLLEVGTEELPASFLGGAIAQWRSRIPQSLAANSLTSESVEVYGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G A GF + G++ + + KG+ + Sbjct: 61 SQQPDREEEIKGPPAQAAFKDGQPTPAAVGFAKKQGVELEALE--VRPTDKGEFVFIQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + D+L +VP I + + MRW + RP++ ++ +L + Sbjct: 119 TPGRPVADILTELVPQWIYSLEGKRLMRWGDGD-----VRFSRPIRWLVALLDEAILPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ L + I+YGHR P PI +Q Y+ L + V ++ + R I Sbjct: 174 LVNGSL-TVKSDRISYGHRVLHPAPITIQKAGDYVNTLRDGYVTVNAKERTTTIKEQVAA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +G DLLEE+ LVEW +G F++++L LP E+ + ++Q+ F Sbjct: 233 TVQKLGGYTEIYPDLLEEVTNLVEWPSPVVGKFEEEFLNLPTEVTTTVMVSHQRYFPVFK 292 Query: 295 --REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L FI VSN + I GN RV+ ARL D F+K D Sbjct: 293 TGDHKELLPYFITVSNGDPT-KSEVIAVGNERVIRARLADGQFFYKTD------------ 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 LSK L+ + +L+ V F +G+ +V RI + +I+ + + D Sbjct: 340 --------LSKSLESYLPQLET--VTFQEDLGSLRGKVERIVKVAAQISSQLQLGEGDRQ 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +L KADL T++V EFPELQG +G++YAV E+ AI EH PRG + +P Sbjct: 390 NNQRAALLCKADLVTQMVFEFPELQGIMGQKYAVASGESPEVSTAIVEHYLPRGADDILP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 V LAD+LDTL++ + + P+GS DP+ALRRA ++ I + I L+ + Sbjct: 450 QTLTGQVVGLADRLDTLVSIFGLGLIPTGSSDPFALRRAANAVVNITWAANLQINLASLL 509 Query: 530 ED-----------------QNLILFFHDRLK-LYLHDRDIRHDLIEAILRPEN------- 564 L FF R++ L ++ I +DL+ A+L + Sbjct: 510 AQTVAEFAAQYNKDQAPLITALNEFFLQRIRTLLQEEKQIDYDLVNAVLGENDPEYTERA 569 Query: 565 -DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLL 621 +LL + D +L + +K + R ++ A + +++ + P+ Sbjct: 570 LQDLLDVRDRALYLQQIRRDGTLDKIYETVNRSTRLAAQGDLDTQQLDPTSVVRPELFQK 629 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVR 678 +E Y + Q + + + Y + L I + FF D VLV D E++ Sbjct: 630 PSESDFYDALVKLVPQTQAAQESRNYQLLVAGLVEIAPTVSNFFDGADSVLVIDPDPEIK 689 Query: 679 DNRLSLLQYIKNIILIVINVQKIV 702 NRL++L ++N ++ + IV Sbjct: 690 RNRLNILGLLRNHARVLADFGAIV 713 >gi|160873138|ref|YP_001552454.1| glycyl-tRNA synthetase subunit beta [Shewanella baltica OS195] gi|189082273|sp|A9KU83|SYGB_SHEB9 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|160858660|gb|ABX47194.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS195] gi|315265363|gb|ADT92216.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS678] Length = 689 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 211/722 (29%), Positives = 342/722 (47%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAIKVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLAVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ Sbjct: 293 DAGKLLPNFIFVTNIESKD-PAQIISGNEKVVRPRLADAEFFFNTDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 339 -------KHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 509 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANAAEEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINASLLTEAAEQALAAKLNELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|255307459|ref|ZP_05351630.1| glycyl-tRNA synthetase beta chain [Clostridium difficile ATCC 43255] Length = 688 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 220/728 (30%), Positives = 357/728 (49%), Gaps = 68/728 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + EE GP K GF++S GL K K + A Sbjct: 61 SDRQSDLEEEIKGPAKKIAVDAENNLTKPALGFIKSKGLSESD--IYFKQVGKEEYIFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +++ + +VLK I+P I+ V +PK+MRW + RP++ I+ +L Sbjct: 119 IKQDGKETSEVLKDILPETIKSVVFPKAMRWG-----GKNLKFARPIRWIVTLL-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 169 DKVLEFDLEGIISSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIRKQC 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ F Sbjct: 229 IEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG + FI V N + + GN +V+ ARL DAL F++ D Sbjct: 289 L-KEGKMLPNFIAVRNGDS-YRIDNVKAGNEKVLEARLADALFFYREDT----------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVAL 410 + L+ + +L VVF K+GT ++ R+ L I + + A Sbjct: 336 ---------KRNLESYIEKLKT--VVFQVKLGTIYDKTLRLEKLSADILDSLGLVDEKAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH PR + +P Sbjct: 385 TIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLPRFAGDILPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S+ADKLD++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ + + IE Sbjct: 445 TNAGVALSIADKLDSIAGFFAIGIQPTGSQDPYALRRQALGILSILMDRKVAVDIKVLIE 504 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + + FF++R+K D IR+D+++A+L + +++ + Sbjct: 505 HALDNYSELDFNKEEVVEQTMNFFNERVKNLFKDLGIRYDVVDAVLSSDINDVSDMHMRA 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 LN + + + L + R+ + E S +I L +AE +LY Sbjct: 565 LELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEIKLYNEFKQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + E + K+Y D S+ ++ FD V+V +D +++NRL+LL+ + + +L Sbjct: 619 KIKVNELLKDKKYGIALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALLKQVYDTMLE 678 Query: 695 VINVQKIV 702 + ++ KIV Sbjct: 679 ICDLSKIV 686 >gi|114567035|ref|YP_754189.1| glycine--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317967|sp|Q0AWT6|SYGB_SYNWW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|114337970|gb|ABI68818.1| Glycine--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 688 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 220/729 (30%), Positives = 350/729 (48%), Gaps = 68/729 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+P+ + +DL + L E + + TP RL L++K + Sbjct: 1 MAQDLLLEIGVEEMPSAYMPRVLKDLKDLAQKNLAEARLSCGEVLTLGTPRRLCLWVKEI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + + E GP+ G KA GF RS G+ ++ + A+ Sbjct: 61 SEEQEDSLLENRGPKKSIAFDANGNPSKAGLGFARSQGVDFRELQI--REVSGVEYLFAI 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ + E +L ++ I + +PKSM WS + + RP++ +L I Sbjct: 119 KKEKGQAAEQILPGLLLKVIHSLSFPKSMTWSYYQT-----RFARPIRWLLAIF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K ++ +++ I N TYGHRF + + V S+D Y R L E V+LD R+ I Sbjct: 169 DKNVEFNIENIKSANYTYGHRFLSTGVLLVTSIDDYFRVLREHYVILDQAERKKMIWQQV 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++A G + +E+++LLEE+ LVE+ F G F YL +P E++ ++ +Q+ F Sbjct: 229 QKVAGEAGGKAMENEELLEEVAFLVEFPTAFYGEFSPSYLDVPPEVLTTSMIEHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L F+ V N + GN RV+ ARLEDAL FW D Sbjct: 289 YNNEGRLLPGFVGVRNG-TDYCLDIVRAGNERVLKARLEDALFFWNEDSR---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-DVALV 411 K L++ A+L +V+FH ++GT ++V R++ L I Q + Sbjct: 338 ----------KSLEEMSAKLK--NVLFHERLGTLADKVLRLQKLALFIGQQTGLGQPEKL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 R+ +L KADL + +V EFPELQG +G+ YA E +AI EH PR + +P++ Sbjct: 386 QRSALLCKADLMSNMVYEFPELQGIMGRYYASGSAEEPEVAEAIFEHYLPRFAGDKLPSS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 I +SLA+K+D L+ ++I KPSGS+DPYALRR LG++ IIL+ K+ I L E Sbjct: 446 AGGIVLSLAEKMDNLMGCFSIGIKPSGSQDPYALRRQALGLVNIILDKKLSIDLKLVFEQ 505 Query: 532 ------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + L+ F + R++ L D I +D+++A L + +L Sbjct: 506 AYLGYKDIDLEKSREDSVKELLDFIYQRMRGVLLDNGISYDVVDAALSRPSFDLFETYYR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 L EF S E F++ R+ + E S EI L+ E+EK L + Sbjct: 566 AFKLQEFKKSPVFEDFMVVYNRVHNLSRKWE------SEEIDLDLLVDESEKNLCQKLPG 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 I++S+ + Y + +LL ++ I+ FF V+V VDD ++ RL +L+ I N+ Sbjct: 620 LQEDIKKSLIAQDYTRALELLAALRADIDQFFTAVMVMVDDERLKAARLGILKSIANMFN 679 Query: 694 IVINVQKIV 702 + + KIV Sbjct: 680 SIADFSKIV 688 >gi|217971228|ref|YP_002355979.1| glycyl-tRNA synthetase subunit beta [Shewanella baltica OS223] gi|254781861|sp|B8E3Q5|SYGB_SHEB2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|217496363|gb|ACK44556.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS223] Length = 689 Score = 571 bits (1471), Expect = e-160, Method: Composition-based stats. Identities = 211/722 (29%), Positives = 341/722 (47%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELSKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLAVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ Sbjct: 293 DAGKLLPNFIFVTNIESKD-PAQIISGNEKVVRPRLADAEFFFNTDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 339 -------KHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLIAKAQA 509 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINASLLTEAAEQALAAKLNELQPLLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|253576086|ref|ZP_04853418.1| glycyl-tRNA synthetase beta subunit [Paenibacillus sp. oral taxon 786 str. D14] gi|251844429|gb|EES72445.1| glycyl-tRNA synthetase beta subunit [Paenibacillus sp. oral taxon 786 str. D14] Length = 693 Score = 571 bits (1471), Expect = e-160, Method: Composition-based stats. Identities = 196/733 (26%), Positives = 343/733 (46%), Gaps = 73/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI EE+PAR A E L + L+E + + + Y TP RL + +K + Sbjct: 1 MAKDLLFEIGLEEMPARFIRAAMEQLKERTVKWLEESVIQHGAVEAYATPRRLAVLVKDV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF RS G ++ + Sbjct: 61 AEKQEDVHEEVKGPSRKIALDENGQWSKAALGFARSQGASPEQ--FTFREVGGTEYVYVS 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +L + +Q + +PK+MRW F ++RP++ ++ + + Sbjct: 119 KSRIGVETSSLLAEGLLGILQAMNFPKNMRWGNYD-----FKFVRPIRWLVALFGKD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I+L++ + N+T GHRF + ++ Y+ L V+ D R+ I N Sbjct: 171 --VIELEIAGVKSDNVTRGHRFLGTETV-IEEPAAYVETLRSQHVIADVNERQALIQNQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA G + +DLLEE++ LVE V G+F++ +L +P+E++ +++ +Q+ F Sbjct: 228 EALAKEKGWHIAVKEDLLEEVLFLVETPTVLYGTFEESFLNIPQEVLITSMREHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V N + I +GN +V+ ARL DA F++ DQ Sbjct: 288 LNAQGNLLPYFVTVRNGNNT-SLDVIARGNEKVLRARLSDAKFFYEEDQKLAIK------ 340 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VA 409 +++L+ +VFH ++GT G++V RIR +K++ ++ D Sbjct: 341 --------------DALSKLE--SIVFHEELGTIGDKVRRIRRNTEKLSAMLRTDTGTAE 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 R + K DL T++V EFPELQG +G++YA E I EH +PR + VP Sbjct: 385 AAARTAEICKFDLVTQMVYEFPELQGVMGEDYARKAGEPEVVAKGIFEHYQPRFADDAVP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + VS+ADK+DT++ ++I P+GS+DPY LRR GI++II+E+K+ + L+ Sbjct: 445 ASTVGSIVSIADKIDTIVGCFSIGIIPTGSQDPYGLRRQAAGIVQIIVEHKLSVSLTDIF 504 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + ++L+ FF R++ L D ++R+D+++A+L D++++ Sbjct: 505 KLALETHQQFRGLKRSEDEIMKDLMDFFGLRVRKTLSDENLRYDVVDAVLSAGYDDVVST 564 Query: 571 VDLIKHLNEFFSS-AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 V K L E + + + + S R+ + A ++ L AE+ LY Sbjct: 565 VARGKALMEAVDTKEEFKATVESFGRVSNLAAKA------TGEKVRSDLLSEPAEQALYE 618 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +E++ + +L+ + + I +FFD V+V +D +R NRL+LL I Sbjct: 619 AWRSISDKYRETLASRDAAGALELIGGLKDAITVFFDAVMVMAEDDAIRTNRLALLAAID 678 Query: 690 NIILIVINVQKIV 702 + + K+V Sbjct: 679 EDLKAFADFGKLV 691 >gi|254369520|ref|ZP_04985531.1| glycine-tRNA ligase [Francisella tularensis subsp. holarctica FSC022] gi|157122474|gb|EDO66609.1| glycine-tRNA ligase [Francisella tularensis subsp. holarctica FSC022] Length = 694 Score = 571 bits (1471), Expect = e-160, Method: Composition-based stats. Identities = 205/727 (28%), Positives = 372/727 (51%), Gaps = 65/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVA--TLKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P K MRW + S+ ++RP+ +L + + + Sbjct: 124 SGQATVNLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLALYGND-----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V++ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSK-KPELVTSGNQKVMSARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDF 634 +F++S K + + S KR+ I++ K + + + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANIIS---KNATDKDYYYNIELAKAAANEYELALAYSIEEV 627 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + Sbjct: 628 AADLHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVNLHKMFIG 687 Query: 695 VINVQKI 701 + ++ K+ Sbjct: 688 IADISKL 694 >gi|52081072|ref|YP_079863.1| glycyl-tRNA synthetase subunit beta [Bacillus licheniformis ATCC 14580] gi|52786452|ref|YP_092281.1| glycyl-tRNA synthetase subunit beta [Bacillus licheniformis ATCC 14580] gi|319644969|ref|ZP_07999202.1| GlyS protein [Bacillus sp. BT1B_CT2] gi|52004283|gb|AAU24225.1| glycyl-tRNA synthetase (beta subunit) [Bacillus licheniformis ATCC 14580] gi|52348954|gb|AAU41588.1| GlyS [Bacillus licheniformis ATCC 14580] gi|317392778|gb|EFV73572.1| GlyS protein [Bacillus sp. BT1B_CT2] Length = 679 Score = 571 bits (1471), Expect = e-160, Method: Composition-based stats. Identities = 203/720 (28%), Positives = 336/720 (46%), Gaps = 61/720 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR H + L L LKE+ + + +++ Y +P RL + ++ Sbjct: 1 MSNQDLLLEIGLEEMPARFMHDSMTQLGEKLESWLKEKNIAFGSVKLYNSPRRLAVLVEN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF R G KD K + Sbjct: 61 VAEKQDDVKEEAKGPAKKIALDENGEWTKAAIGFSRGQGASPED--LYFKDIKGTEYVFV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L + + + +PK+MRW + +IRP+K I+ + +E Sbjct: 119 QKFQKGQDTFSLLPE-LRDLVTSLHFPKNMRWGSED-----LKYIRPIKWIVALFGSE-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++ + + G T GHRF + + Y LE V+ DP R+ I+ Sbjct: 171 ---VVPFSVAHVETGRTTQGHRFLG-KAADLSAPSEYEATLESQFVIADPAKRKQLIVKQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ ++ D+DLL+E+ LVE+ V GS+++++L +PEE++ T+K +Q+ F Sbjct: 227 LDELAAEKSWDIPRDEDLLDEVNHLVEYPTVLFGSYEEEFLAIPEEVLVTTMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L F+ V N + + +GN +V+ ARL DA F+K DQ Sbjct: 287 VKDENGSLLPYFVTVRNGDSR-ALENVARGNEKVLRARLSDASFFYKEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--- 408 +D+ + +L+ +VFH ++G+ G++V R L ++IA++I AD Sbjct: 338 ------------NIDENVRKLE--KIVFHEELGSLGDKVRRTEALAERIAEVIGADQETV 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L+ RA +SK DL T +V EFPELQG +G++YA + E A+ EH PR Sbjct: 384 QLIKRAAHISKFDLVTHMVYEFPELQGIMGEKYARMLGEKEEVALAVNEHYMPRQAGGQT 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P++ V+LADKLDT+ +F+ I P+GS+DPY LRR GI++I+L+ I + Sbjct: 444 PSSIAGAVVALADKLDTVASFFKIGVIPTGSQDPYGLRRQASGIVQILLDRNWGISFKEL 503 Query: 529 ------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + L+ FF RLK L +IR+D+++A+L N + V L + Sbjct: 504 AAFAGQEANSELLEFFKQRLKYVLTAENIRYDVVDAVLESTNLEPYSAVKKAAVLESAAA 563 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + ++ + R+ I E + I E+ L+ I+ Sbjct: 564 KPEFKETAEALARVISISKKSE------TSAIDASLFENPQEEELFKAYEACRQQIETLY 617 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y L + EPIE +FD +V+ +D ++ NRL+ + + +I N+ I+ Sbjct: 618 QAKDYEGAFSELSKLKEPIEAYFDHTMVHAEDERLKANRLAQMASLAELIRSFANINAII 677 >gi|297539321|ref|YP_003675090.1| glycyl-tRNA synthetase subunit beta [Methylotenera sp. 301] gi|297258668|gb|ADI30513.1| glycyl-tRNA synthetase, beta subunit [Methylotenera sp. 301] Length = 706 Score = 570 bits (1470), Expect = e-160, Method: Composition-based stats. Identities = 215/734 (29%), Positives = 356/734 (48%), Gaps = 65/734 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKG 58 M + L+E++ EE+P + +K E S +L LK +G+ + + +P RL ++ Sbjct: 3 MQNLLVELFVEELPPKALNKLGEAFSNVLFETLKSQGLAAVGTIVTAFASPRRLAVHATN 62 Query: 59 LSPHSPEKIE-ERLGP------RVGAGKKAIDGFLRSTGLQTISDC-QIKKDPKKGDVYL 110 + +P+K ++L P G A+ L GL + K+ K + Sbjct: 63 ILAVAPDKTSTQKLMPVSVGLDASGNPTPALIKRLNGMGLDESAVANLTKQADGKNEALF 122 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 + + ++D L++ + AI K+P PK M + ++ +++RP S++ + Sbjct: 123 LDVLQKGVSLKDGLQSALNEAISKLPIPKVMTYQLADG-WTSVNFVRPAHSLVAL----- 176 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAI 228 +++ + + GN T GHRF A P+ +++ D Y L+ V+ RR I Sbjct: 177 HGNEVVAVTALGLTAGNATQGHRFEAAVSPVVLKNADSYAEQLKTEGAVIASFAERRAEI 236 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A+ L+ +ED+ LL+E+ LVE V +G F++ YL +P+E + LT+K NQK Sbjct: 237 VRQLNAAAAKQNLKPIEDEALLDEVTALVERPNVLLGQFEEIYLEVPQECLILTMKANQK 296 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F L N F++VSNI D +A++ GN RVV RL DA F+ +D+ Sbjct: 297 YFPLLDANDKLTNKFLIVSNISPDDA-SAVIGGNERVVRPRLADAKFFFDQDR------- 348 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ-LIDAD 407 K L+ R+ L+ VV+H K+G+QGER R+R + + I + L++ D Sbjct: 349 -------------KKTLESRLEGLN--KVVYHNKLGSQGERTERVREIARDIGKALLNED 393 Query: 408 VA-------LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 A LSK DL T++V EFPELQG +G+ YA + AIE+H K Sbjct: 394 AYYGDSLSGKASIAAKLSKTDLVTDMVGEFPELQGIMGRYYAQHEGLENDIAFAIEDHYK 453 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR + +P N I + V+LADKL+TL+ ++I EKP+G KDP+ LRR LG+IRI++E K Sbjct: 454 PRFAGDALPRNPIGVVVALADKLETLVGLFSIGEKPTGDKDPFGLRRQALGVIRILIEKK 513 Query: 521 IDIPLSQFIEDQN-------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 +++ L++ I L FF DR+ L ++ +EA+L + L Sbjct: 514 LELSLNELIRIAERPFKGLGAENYQLLKAFFSDRVANMLREQGANSQEVEAVLSLNPEIL 573 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 I + + F + + + KR+ IL K E+ E++ L AE L Sbjct: 574 SDIPQRLNAVRAFSALEEAPALAAANKRVGNILK---KVEGEVKAEVNANLLQEAAEIAL 630 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 +S + + Y L ++ P++ FFD V+VN DD ++ NRL LL Sbjct: 631 NDALSKVKPEADKLFESGDYTASLKSLAALKAPVDAFFDNVMVNADDPALKANRLGLLAI 690 Query: 688 IKNIILIVINVQKI 701 + + V ++ K+ Sbjct: 691 LHQTMNRVADLSKL 704 >gi|186684136|ref|YP_001867332.1| glycyl-tRNA synthetase subunit beta [Nostoc punctiforme PCC 73102] gi|186466588|gb|ACC82389.1| glycyl-tRNA synthetase, beta subunit [Nostoc punctiforme PCC 73102] Length = 717 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 200/745 (26%), Positives = 333/745 (44%), Gaps = 74/745 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L+ + ++++ Y TP RL + +KGL Sbjct: 1 MPAFLLEVGTEELPASFLSDALIQWRERIPQSLEANSLQGESVQVYGTPRRLAVLIKGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP G A GF + G++ D + KG+ R Sbjct: 61 SQQADREEEIKGPPAQAAFKDGQPTAAALGFAKKQGVEL--DALFLRPTDKGEFVFVQKR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + ++L +V I + + MRW + RP++ ++ +L + Sbjct: 119 IPGRPVAEILTELVQEWIWGLEGKRLMRWGDGDG-----RFSRPIRWLVALLDETVLPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ K I I+ GHR P P+ + Y+ L+ A V +DPE R N I Sbjct: 174 LVNGS-KTIQSDRISQGHRVLHPEPVTIAQATDYVTALKSAYVTVDPEERENLIKEQVKA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A ++ V DLL E+ LVE+ +G F+ ++L LP E+I + T+Q+ F Sbjct: 233 VAESLSGYTVIYPDLLAEVTNLVEYPSTVVGKFEPEFLELPTEVITEVMVTHQRYFPVFK 292 Query: 295 R---EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 E L FI +SN V GN RV+ ARL D F++ D Sbjct: 293 PGSSEQELLPNFITISNGDPKKSDIVAV-GNERVIRARLADGRFFYEAD----------- 340 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DV 408 L+KP+D + +L+ V F ++G+ ++ R+ + ++I+ + Sbjct: 341 ---------LTKPIDSFLPQLE--KVTFQEELGSVRTKIDRVVKIAEQISTQLKLAENQS 389 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA +L KADL T++V EFPELQG +G++YA+ E+ AI +H P G +N+ Sbjct: 390 QKIQRAALLCKADLVTQMVYEFPELQGIMGEKYALASGEDAEVAKAIYQHYLPTGAGDNL 449 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P V LAD+LDTL++ + + PSGS DP+ALRRA +++I + I L Sbjct: 450 PETLTGQIVGLADRLDTLVSIFGLGLIPSGSSDPFALRRAANAVVKITWFYNLPINLDDL 509 Query: 529 IED-----------------QNLILFFHDRLK-LYLHDRDIRHDLIEAILRPEN------ 564 + L FF R++ L ++ I +DL+ A+L + Sbjct: 510 LAQIATDFAAKYQKDRASLTTALQEFFLQRIRTLLQEEKQIDYDLVNAVLGENDPEYTER 569 Query: 565 --DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EKKNREISLEISPQYLL 620 +LL + D +L + S + + + R ++ A + K E + + P+ Sbjct: 570 TLKDLLDVRDRALYLQQIRSDSILDNIYETVNRSTRLAAQGDLDTKQLEPTSVVRPELFQ 629 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREV 677 +E+ LY + + Q + + Y + L I + FF D VLV D E+ Sbjct: 630 KPSEEALYNALIESVPQTQTAQQTRNYQLLVAALAKIAPTVSNFFDGPDSVLVMDSDPEI 689 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 + NRL LL ++N ++ + IV Sbjct: 690 KRNRLHLLGLVRNHARVLADFGAIV 714 >gi|329850859|ref|ZP_08265704.1| glycyl-tRNA synthetase beta subunit [Asticcacaulis biprosthecum C19] gi|328841174|gb|EGF90745.1| glycyl-tRNA synthetase beta subunit [Asticcacaulis biprosthecum C19] Length = 682 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 246/722 (34%), Positives = 373/722 (51%), Gaps = 62/722 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP L+E++SEEIPARMQ AA D + L G+ +++++ Y P RL L ++GL Sbjct: 1 MPQLLIELFSEEIPARMQLGAARDFERLFGAKLNTSGLSFESIKAYVAPRRLALVVEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EE GP+ GA ++A+ GFLR GL + G +A + KP R Sbjct: 61 AEQAAVTEEVKGPKDGAPEQAMAGFLRKVGLTQDQLVL-----ENGVW-MARIEKPGRRT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D L ++ I PWPKSMR +S+F W+RPLK IL + +I+ +L Sbjct: 115 VDALPDMLREVILAFPWPKSMRSG-----VSSFRWVRPLKRILFLF-----DGQIVPFEL 164 Query: 181 KEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + + ++T GHRF + V Y + L + V+LD R+ IL +A + Sbjct: 165 EGLTASSLTEGHRFLGSGKALNVSDFASYHKALADNSVILDHAERQAFILKEAKAVCEDT 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGV 298 G EL+ED+ LLEE+ GL E+ +G D K+L LP E+I+ +++T+QK F R + G Sbjct: 225 GCELIEDQGLLEEVAGLNEFPMPILGDMDPKFLALPPEVIKTSMRTHQKYFAVRDKATGK 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 +A FI+V+NI+A DGG I +GN++V++ARL D + FW D Sbjct: 285 MAPHFIIVANIRARDGGDEIKRGNAKVLSARLSDGVFFWNEDNKAG-------------- 330 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 D + RL FH K+GT +RV RI L IA + AD+A A L+ Sbjct: 331 -----NFDGWLERLK--GTTFHVKLGTMAQRVERISALAAHIAGHLGADIAAAREAARLA 383 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +++V EFPELQG +G YA DAI EH KP+GP ++VP K+S V+ Sbjct: 384 KADLASKMVGEFPELQGVMGGYYADALKLKPEIADAIREHYKPQGPSDSVPAGKVSAAVA 443 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------- 530 LADK+DTL+ F+AI EKP+GSKDPYALRR+ LG++RII E+ + L ++ Sbjct: 444 LADKIDTLVGFFAIGEKPTGSKDPYALRRSALGVLRIIREHGATLHLGGLVDAWYRSRGE 503 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ FF DRLK+ L D R D++EA +D+++ + I+ + Sbjct: 504 LPVAVQDVEAVRPEVLDFFADRLKVQLRDEGRRFDVLEA--TRGSDDVVNTITRIEAVEA 561 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 ++ +GE L KR ILA + + EK L ++ + + Sbjct: 562 VIATPQGEDLLTLHKRAANILAASKTDLSHAMPQAYEGI--DPLEKALLEALNVARSDVV 619 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y + ++ + ++ F D VLVN DD +V+ NRL++L+ + + + ++ Sbjct: 620 SHISEENYAGALKSIAALRQNVDSFLDGVLVNADDEKVKVNRLAILRGVCELSAPIADLS 679 Query: 700 KI 701 KI Sbjct: 680 KI 681 >gi|319940873|ref|ZP_08015212.1| glycine tRNA synthetase [Sutterella wadsworthensis 3_1_45B] gi|319805755|gb|EFW02536.1| glycine tRNA synthetase [Sutterella wadsworthensis 3_1_45B] Length = 701 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 217/725 (29%), Positives = 364/725 (50%), Gaps = 55/725 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKG 58 M + L+E+ +EE+P + K +E + + L + + + Y P RL +++ Sbjct: 6 MTNLLVELQTEELPPKALRKLSEAFAEGVCKSLADAHFLADSSVTTAYGAPRRLAVHITD 65 Query: 59 LSPHSPEKI-EERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + SP++ ++L P G A+ + + G+ + D K + Sbjct: 66 VLAKSPDETFRQKLVPVKVGIGADGQATPALVKKMAALGINCAVTDLERVDDGKNEQLYY 125 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + L+ + A++ +P PK M + ++ S++RP++ + +L E Sbjct: 126 EGVRQGVELASGLQHALEYAVKHLPIPKVMTYQLADG-VTTVSFVRPVRHLTALLGTE-- 182 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 I+ ++L + G +T GHRFH PI +++ D Y+ ++ A V+ + RR I + Sbjct: 183 ---IVPVELFGLKSGRLTRGHRFHTSEPIAIENADSYVEQMKAAFVMPCYDERRAVIEAE 239 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 R A+A+ E + +DLLEE+ L EW ++ F+ ++L +P+E + LT++ NQK F Sbjct: 240 LKRRAAALDAEAIMPEDLLEEVTALTEWPVIYESQFESEFLAVPQECLILTMQLNQKYFA 299 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R G L N F+LVS + A DGG AI +GN+RVV ARL DA F+ +D+ Sbjct: 300 LEDRSGKLMNRFLLVSQLIAKDGGKAISEGNARVVRARLADAKFFYDQDR---------- 349 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L+ R+ L VV+H K+G+Q ER+ R+R + A L+ A+ Sbjct: 350 ----------MHTLESRVEGLR--HVVYHNKLGSQYERMLRVRRIAAAAAALLGANKTEA 397 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA +L+KADL T +V EFPELQG +G+ YA E AI EH +PR + +P+ Sbjct: 398 DRAAMLAKADLRTLMVGEFPELQGIMGEYYAENDKEPKDVALAIREHYQPRYAGDALPST 457 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S+ V+LADKL+TLI + I + P+G KDP+ALRR LG++R+++E ++D+ L I+ Sbjct: 458 SVSLAVALADKLETLIGLFGIGQLPTGEKDPFALRRHALGVLRMLIEKELDVSLPALIDA 517 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q L+ FF DRL++ L +R +A+L D L I I Sbjct: 518 AWEAEKDVAGVVDNRQELLTFFADRLRVMLRERGATAQEADAVLAKRLDKLADIPKRIGA 577 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KRI IL K E+S +I P L AEK L+ + Sbjct: 578 VRAFMDLPEAEALTAANKRIGNILK---KVEGEVSEKIDPALLQEAAEKNLFEELRAVEP 634 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + R+ + + ++ P++ FF+ V+VN +D +R NRL+LL+ + ++ V Sbjct: 635 AAEALYAEGRFEDMLVTIAALRSPVDAFFETVMVNAEDPALRANRLALLKRLYGVMNAVA 694 Query: 697 NVQKI 701 + ++ Sbjct: 695 EISRL 699 >gi|84394118|ref|ZP_00992852.1| glycyl-tRNA synthetase beta subunit [Vibrio splendidus 12B01] gi|84375264|gb|EAP92177.1| glycyl-tRNA synthetase beta subunit [Vibrio splendidus 12B01] Length = 693 Score = 570 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 206/708 (29%), Positives = 333/708 (47%), Gaps = 68/708 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKNFLIELGTEELPPTALRSLAEAFASNFEAGLKTAELSHEGIKWYAAPRRLALKVTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP + G KA G+ R G+ ++K D KG+ L Sbjct: 61 AEGQADKVVEKRGPAISVAFDAEGNATKAAQGWARGNGITVEQADRLKTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++++ I A+ +P PK+MRW + +IRP+K++ +L Sbjct: 119 QEVAGKPVQELVMDIAAKALAGLPIPKAMRWGNSD-----IQFIRPVKTLTVLL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +++++ + + GHRF + S D Y LE V+ D + R+ IL D Sbjct: 169 DELVEGKILGVASARTIRGHRFMGEQEFTIDSADQYPAILEERGKVMADYDARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AKKAADAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEQEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TR-----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 E L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYSHEIGDAERSLLPNFIFVSNIESKE-PRHVIEGNEKVVRPRLADAEFFFNTDR----- 342 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 +PL R+A LD +F ++GT ++ RI L IA+ IDA Sbjct: 343 ---------------KRPLIDRLAELDQA--IFQKQLGTIKDKTDRITELAGYIAEQIDA 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 DV RA +L+K DL T +V EF + QG +G YA EN A+ E PR + Sbjct: 386 DVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGENEQVALALYEQYMPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+ IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ Sbjct: 446 TLPSTGISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLT 504 Query: 527 QF---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + ++I F R + + D D+I+A+L Sbjct: 505 DLIGKAKELLGDKLTNDNVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLARRPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 QRVKAVSHFRELEAAEALAAANKRVGNILA---KFDGELPAEIDLTLLQEDAEKALAENV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 EVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 669 >gi|330823227|ref|YP_004386530.1| glycyl-tRNA synthetase subunit beta [Alicycliphilus denitrificans K601] gi|329308599|gb|AEB83014.1| Glycyl-tRNA synthetase beta subunit [Alicycliphilus denitrificans K601] Length = 721 Score = 570 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 206/747 (27%), Positives = 349/747 (46%), Gaps = 79/747 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K + + +L L +G+ + Y +P RL +++G+ Sbjct: 5 SNLLVELFVEELPPKALQKLGDAFAGVLRDQLVAQGLAAAGAPLTAYASPRRLAAHIEGV 64 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLA 111 + +K + ++L P G A+ L + G + +K+ K +V Sbjct: 65 LAQASDKAVSQKLMPVAVGLAADGQPTPALLKKLSALGADASAVAGLKRVHDGKAEVLYY 124 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + L+ + AI ++P PK MR+ ++ ++RP ++ + A Sbjct: 125 ESTAQGATLAQGLQKALDEAIARLPIPKVMRYQLEDG-WTSVHFVRPAHGLVALHGAG-- 181 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAIL 229 ++ + + + GN T GHRF A P+ ++ D Y L V+ RR I+ Sbjct: 182 ---VVPVAVLGLAAGNATQGHRFEAAVQPVVLRDADSYAEQLRAQGAVIAGFAERRAEIV 238 Query: 230 NDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 A +G +ED LL+E+ LVE V + F++++L +P+E + LT+K NQ Sbjct: 239 RQLRAAAEKLGGGVRPIEDDALLDEVTALVERPNVLVCQFEREFLAVPQECLILTMKANQ 298 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 K F EG L + F++VSNI D GA +QGN RVV RL DA F+ +D+ Sbjct: 299 KYFPLLDAEGRLTHRFLVVSNISPQDAGAV-IQGNERVVRPRLADAKFFFDQDR------ 351 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI--- 404 K L R+A+L VV+H ++G+QGERV R+R + K I Q + Sbjct: 352 --------------KKTLASRVAQLS--KVVYHNQLGSQGERVERVRAIAKAIGQQLFAA 395 Query: 405 -----------------DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNE 447 D + VD A +L+K DL T++V EFPELQG +G YAV Sbjct: 396 LAERHELQGTQDGEIAQDWLLTCVDNAALLAKTDLVTDMVGEFPELQGIMGGYYAVNDGL 455 Query: 448 NISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRR 507 AIE+H KPR + +P + + V+LADK++TL+ + I P+G +DP+ALRR Sbjct: 456 PDEVAHAIEDHYKPRFAGDELPRENVGLVVALADKIETLVGMFGIGNLPTGDRDPFALRR 515 Query: 508 ATLGIIRIILENKIDIPLSQFIE-------------DQNLILFFHDRLKLYLHDRDIRHD 554 LG+IR+++E + + L + L F +DRL L ++ R Sbjct: 516 HALGVIRMLMEKDLPLDLGALLAGAVPAFAGRIDDPSALLADFIYDRLAGALREQGYRSQ 575 Query: 555 LIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI 614 ++A+L L + + + F + + + + KR+ IL K ++ + Sbjct: 576 EVDAVLALRPQRLALVEKQLAAVRAFSALPESQALAAANKRVSNILK---KAGGDVHAHV 632 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 +P+ L +AE+ LYA + F + Y L + P++ FFD V+VN + Sbjct: 633 NPELLREQAEQDLYAALQRFVPEADAQFERGDYTASLQTLAVLRAPVDAFFDDVMVNAEQ 692 Query: 675 REVRDNRLSLLQYIKNIILIVINVQKI 701 ++R NRL LL+ + + V ++ ++ Sbjct: 693 LDLRLNRLGLLKTLHEAMNRVADLSRL 719 >gi|126735419|ref|ZP_01751165.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. CCS2] gi|126715974|gb|EBA12839.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. CCS2] Length = 758 Score = 570 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 268/783 (34%), Positives = 392/783 (50%), Gaps = 109/783 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L E G+ Y + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQTRAADDLRKLVTDGLVEAGLTYAGAAAFSTPRRLALSVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GP+VGA KAI+GFLR G+ +D K G VY AV+ KP R+ Sbjct: 61 AESKAVREERKGPKVGAPDKAIEGFLRGAGVAREDLE--VRDDKNGQVYFAVIEKPGRMA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ ++ PWPKSMRW + W+RPL +ILCIL E A +++ L++ Sbjct: 119 ADIIAEVLEKTVRNFPWPKSMRWGNGN-----LKWVRPLHAILCILSDE-AGTEVVPLEV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP V + D Y L+ A V+L + R AI +A A A+G Sbjct: 173 DGIKSGNTTQGHRFLAPDAFTVANFDDYEAKLKRANVVLRADERAEAIWAEATTQAFALG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L++VED+ LL E+ GLVEW V +G D +L LP E+++ ++K +QK F R + Sbjct: 233 LDVVEDRGLLAEVAGLVEWPVVLLGQIDDAFLGLPPEVLQTSMKEHQKFFSVRNPKTERI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ +D G I+ GN +V++ARL DA FW+ D + Sbjct: 293 ERFVTVANMETADNGTTILAGNQKVLSARLADAKFFWENDLRVAKAGMQPWLDS------ 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+G+Q +R+ RI L ++IA + AD L +A ++KA Sbjct: 347 -------------LANVTFHNKLGSQKDRIERIAALAREIAPSVGADPDLAAQAAKVAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA + A EEH P GP ++VPT +S+ V+LA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYAAEAGLDAQVAAACEEHYSPLGPSDDVPTAPVSVAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----IEDQNLIL 536 DK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + ++ L Sbjct: 454 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENGHRCVIGDLVVTAYQEHALAW 513 Query: 537 FFHDRLKLY-----------------LHDRDIRHDLIEAILRPE---------------- 563 RL+ Y DR + D + A L E Sbjct: 514 AKQYRLRRYLDPQNEKGVTDFFEGVDGEDRFLGKDAVNAALAHEKVLITDPTTQHSSSPV 573 Query: 564 ----------NDNLLTIV-DLIKH-----------LNEFFSSAKGEKFLLSAKR------ 595 + +LL+ D +K ++ + + L KR Sbjct: 574 YDLAHPTLNLSRDLLSFFHDRLKVFLKDKGIRHDIIDACIAMPGNDDLTLLVKRAEALAA 633 Query: 596 ----------------IFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHI 638 IL E+K+ E S ++ EAEK L+A + I Sbjct: 634 TLATDDGENLIQGFKRANNILTQAEEKDGVEYSYGADIKFAEDEAEKALFAALDAADAKI 693 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +M + + + ++ PI+ FF V VN + +R NRL+LL I+NI L V ++ Sbjct: 694 APAMKAEDFSTAMTAMAALRAPIDAFFTDVQVNAESEILRRNRLNLLSRIRNICLSVADL 753 Query: 699 QKI 701 KI Sbjct: 754 TKI 756 >gi|152998563|ref|YP_001364244.1| glycyl-tRNA synthetase subunit beta [Shewanella baltica OS185] gi|166227925|sp|A6WH92|SYGB_SHEB8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|151363181|gb|ABS06181.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS185] Length = 689 Score = 570 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 211/722 (29%), Positives = 342/722 (47%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGQASFELAHADHYLADLKEKGKVIADYEVRKTLIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGKADIEDSLLEEVASLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ Sbjct: 293 EAGKLLPNFIFVTNIESKD-PAQIISGNEKVVRPRLADAEFFFNTDK------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 339 -------KHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLIAKAQA 509 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINANLLTEAAEQALAAKLNELQPLLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 Query: 700 KI 701 + Sbjct: 687 LL 688 >gi|148359386|ref|YP_001250593.1| glycyl tRNA synthetase subunit beta [Legionella pneumophila str. Corby] gi|148281159|gb|ABQ55247.1| glycyl tRNA synthetase, beta subunit [Legionella pneumophila str. Corby] Length = 688 Score = 570 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 198/722 (27%), Positives = 357/722 (49%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ D K KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSAGNPTPALLGFAKSCGVTV--DALTKTQTDKGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V +++ +P K MRW + RP+ + + +E K Sbjct: 122 EGTKTKDLLPGLVSQSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHK- 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 176 ----ILGVTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AAPLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI VSNI +S+ ++ GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLPYFITVSNIASSNPKQVVL-GNEKVMRARLSDAAFFFKQDK-------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + V+F K+G+ ++V RI+V+ ++Q ++ L +RA Sbjct: 337 ------KQPLSAHIP--STEQVIFQVKLGSVYDKVQRIKVMMDHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAVVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SLAD++DTL+ +AI +KP+G KDP+ LRR L ++R+++ + LS I++ Sbjct: 449 ALSLADRMDTLVGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKVD--IKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ EP++ FFD V+V V++ ++ NRL+LLQ ++ ++ V ++ Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNRLALLQRLQELLQGVADIS 686 Query: 700 KI 701 + Sbjct: 687 ML 688 >gi|255319852|ref|ZP_05361057.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter radioresistens SK82] gi|262380383|ref|ZP_06073537.1| glycyl-tRNA synthetase beta subunit [Acinetobacter radioresistens SH164] gi|255303171|gb|EET82383.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter radioresistens SK82] gi|262297829|gb|EEY85744.1| glycyl-tRNA synthetase beta subunit [Acinetobacter radioresistens SH164] Length = 689 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 200/724 (27%), Positives = 346/724 (47%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKTLRDALQAETVKGLKDAGLAFDSIEAYAAPRRLALKIVN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP V G KA++GF+R G+ + K + Sbjct: 61 VDGAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGISIDQVSTFQ--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + Sbjct: 119 LKDVKGQSLDVLLPQILQTALDHLPVAKRMRSAASRT-----EFVRPVKWVVLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++I+ +++ N+TYGHRFHAP I + + D Y+ L A V+ E R+ I Sbjct: 169 DDQVIEATIQDHTAANVTYGHRFHAPDAITLANADAYLDALRAAKVVASFEERQAIIDQQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA V + DL +E+ LVEW SF++++L +P+E + T++ NQK F Sbjct: 229 VKALADEVNAIAIVPADLRDEVTSLVEWPVALRASFEERFLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + L FI VSNI++ I++GN +VV RL DA F+ +DQ Sbjct: 289 LVNSDHKLQPYFITVSNIESK-APKQIIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT ++ RI +L ++ + A VA Sbjct: 338 ----------KQPLASRSEKL--ANMVFQAQLGTLWDKTVRIAMLAVELTKFTGAQVADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA +LSK DL +E+V EFPELQG G YA L+ EN +A+ E P+ + +P Sbjct: 386 ERAAMLSKCDLTSELVGEFPELQGIAGTYYARLEGENDEVAEALGEQYLPKFAGDVLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN +++ + Sbjct: 446 KTGTTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENNLNVTIEALVNS 505 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + F R + D+ ++ D+I+A+ + L + Sbjct: 506 ALHAYGALITDPNKTRSVAVAFLEGRYRAKYEDQGVQVDVIQAVQAMSPASPLDFDKRVN 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + + + KR+ ILA E + L+ +AEK L+A ++ Sbjct: 566 AVNHFRNLPEAAALAAANKRVANILAKEAAPE----GSVVEANLVEDAEKALFAELAKIT 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ K Y L ++ P++ FFD V+V DD E++ NRL +L ++++ V Sbjct: 622 PVVEPLFAAKDYTAALSALAALRVPVDAFFDGVMVMADDAELKANRLRMLAQLRDLFTKV 681 Query: 696 INVQ 699 ++ Sbjct: 682 ADIS 685 >gi|152980513|ref|YP_001352115.1| glycyl-tRNA synthetase, beta chain [Janthinobacterium sp. Marseille] gi|229470698|sp|A6SV18|SYGB_JANMA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|151280590|gb|ABR89000.1| glycyl-tRNA synthetase, beta chain [Janthinobacterium sp. Marseille] Length = 700 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 204/715 (28%), Positives = 351/715 (49%), Gaps = 59/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + K E + L L+ +G++ + + + +P RL ++L + + +K ++ Sbjct: 16 PPKALKKIGEAFAQTLQASLQTQGLLSADSVLTAFASPRRLGVHLTKVLEQADDKTVMQK 75 Query: 71 LGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 L P G A+ L + G + +K++ K +V ++ D Sbjct: 76 LMPAAVGIGADGKATPALLKKLAALGADESAVAGLKRESDGKAEVLFFNSVVTGVMLTDG 135 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + +++RP ++ + A+ ++++ + + Sbjct: 136 LQKALEETLGKLPIPKVMAYQLADG-WETVNFVRPAHGLVALYGAD-----VLNISVLGL 189 Query: 184 PCGNITYGHRFH-APHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVG- 240 GN T+GHRF P+ ++ D Y + + V+ RR I+ A+ G Sbjct: 190 HAGNTTHGHRFEAGIDPVYIRDADSYAKQIATEGAVIASFAERRAEIVRQLASAAAEAGS 249 Query: 241 -LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 L +ED+ LL+E+ GLVE V +G F++ +L +P+E + LT+K NQK F +G L Sbjct: 250 NLTPIEDEALLDEVTGLVERPNVLIGQFEEAFLEVPQECLILTMKANQKYFPLLDSKGGL 309 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N F++VSNI+ +D + ++ GN RVV RL DA F+ +D+ Sbjct: 310 SNKFLIVSNIRPADA-STVIGGNERVVRPRLADAKFFFDQDR------------------ 350 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 K L R+A LD VV+H K+GTQGER++R+R + + IA + D D A L+K Sbjct: 351 --KKTLMSRVAGLD--KVVYHNKLGTQGERIARVRAIAQAIAGKLGVDAQQADTAAQLAK 406 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL T++V EFPELQG +G+ YA+ + DAIE+H KPR + +P N + + V+L Sbjct: 407 ADLLTDMVGEFPELQGIMGRYYALHDGLPAAVADAIEDHYKPRFAGDELPRNPVGMVVAL 466 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN------ 533 ADKL+TL+ ++I + P+G KDP+ALRR LGIIR+++E K+DI ++ I Sbjct: 467 ADKLETLVGLFSIGQVPTGDKDPFALRRHALGIIRMLIEGKLDIGINDLITAAEKPFNGL 526 Query: 534 -------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 L+ F DRL L ++ I+A+L + L + + + + F + + Sbjct: 527 SAEHRSALLNFIFDRLANALREQGYSAQEIDAVLALQPQRLADVAERLAAVRAFAALPEA 586 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KR+ IL K ++ ++ L AE L ++ + + Sbjct: 587 ASLAAANKRVGNILK---KVEGTVAAQVDTALLKEPAEIALNQTLTTVKPQAEAAFARGD 643 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y L ++ P++ FFD V+VN +D +R+NR LL + + V ++ K+ Sbjct: 644 YTASLQALAALRNPVDAFFDGVMVNAEDIALRNNRQGLLATLHQAMNQVADISKL 698 >gi|239906721|ref|YP_002953462.1| glycyl-tRNA synthetase beta chain [Desulfovibrio magneticus RS-1] gi|259511922|sp|C4XS54|SYGB_DESMR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|239796587|dbj|BAH75576.1| glycyl-tRNA synthetase beta chain [Desulfovibrio magneticus RS-1] Length = 697 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 194/730 (26%), Positives = 327/730 (44%), Gaps = 64/730 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FL EI EE+PAR +++ + L + V + + TP RL + + L+ Sbjct: 1 MSHFLFEIGFEEMPARFLPGLVDEVKKLFAEGLTQAKVDCGTIAAFATPRRLVVSVPDLA 60 Query: 61 PHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + + E GP GA KA +GF + GL + D KG Sbjct: 61 AAARREEEVVSGPPEKVGFDAAGAPTKAAEGFAKGQGLDVSA--VFVMDTPKGRYLALRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++L + A++K+ +PK MRW + F++ RP+ L +L + Sbjct: 119 TTGGEAAIELLPALCLEAVKKLSFPKRMRWGSRE-----FAFGRPVHWFLALL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDA 232 ++ +I G TYG R P P +V + Y + + V+LD R + + A Sbjct: 169 AVVPFQFDDITSGRATYGQRIMGPGPFEVPTAAAYFDIIRDKGKVVLDAREREGIVRSQA 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA G V + LL E+ GL E V +G FD K+L +P E++ +++++QK F Sbjct: 229 EALAKEAGGTAVINPALLAEVTGLTEHPVVLLGRFDPKFLDVPREVLITSMESHQKSFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ + + + +G RV+ ARLEDA FW+ D Sbjct: 289 EDGKGGLLPVFLTTLGLVPGNV-ELVRRGWQRVLTARLEDARFFWEAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-- 410 LS L+ +L+ +VVF A +G+ ++ R+ L IA+ + Sbjct: 336 --------LSASLETWQKKLE--NVVFLAGLGSMRDKGKRLERLCGLIAEQAGKPEIMLE 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +A L+K DL +++V EF ELQG +G Y+ + ++ + A+ E P GP VP Sbjct: 386 ASQAGGLAKVDLVSDMVGEFAELQGIMGGIYSRRKGQSKTASRAVAEQYLPAGPDSPVPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +S+ADK DTL + ++ P+G+ DPYALRRA LGI R+++E+ + + L + ++ Sbjct: 446 TLAGAILSIADKADTLAGCFGLDMAPTGAADPYALRRAALGICRVVIEHGLRLDLMELLQ 505 Query: 531 DQ------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 L+ FF RLK Y + ++EA L ++ + Sbjct: 506 GAIDGYGEVKFKVDRTHVLAKLLDFFGQRLKAYFTGQGYDTLVVEAALGASYTDIAALSA 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRLYAVI 631 + L F + ++ +L+ KR I+ + ++ + L +AEK L AV Sbjct: 566 RLSALAGFAAKPDFDQAVLTFKRAANIIRKQGVGAGVPLTGAVKAALLEEQAEKDLAAVC 625 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 D D Y + +LL+ + ++ FFD V+V DD ++R NRL+LL+ + + Sbjct: 626 QDVFPRFDALFDAGDYGAVLELLYELRPSVDAFFDNVMVMCDDMDMRLNRLNLLKSLVDR 685 Query: 692 ILIVINVQKI 701 + V + + Sbjct: 686 LGRVADFAAL 695 >gi|51891713|ref|YP_074404.1| glycyl-tRNA synthetase beta chain [Symbiobacterium thermophilum IAM 14863] gi|51855402|dbj|BAD39560.1| glycyl-tRNA synthetase beta chain [Symbiobacterium thermophilum IAM 14863] Length = 700 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 223/733 (30%), Positives = 345/733 (47%), Gaps = 67/733 (9%) Query: 1 MP---DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M + +LEI +EEIPAR A E L L E + Y+ + + TP RL LY++ Sbjct: 1 MAETRNLILEIGTEEIPARFCAPALEQLKENAAKALAEARLDYELVDVFGTPRRLVLYVR 60 Query: 58 GLSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 L+ + E GP G F G+ + + +++ D K G+ Sbjct: 61 NLALRQRDVEVEVKGPPRKIAFDAEGNFTVPARKFAEGQGVA-LEELEVRPDEKGGEYLW 119 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 A R +E VL ++ + + WPK+MRW+ + RP+K IL +L Sbjct: 120 ARKRIQGESVETVLPPLLAGLVTSIHWPKAMRWADRE-----LRYARPIKWILALL---- 170 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + D+ I + T GHR P PI V D Y + V++D R+ I Sbjct: 171 -GDWRVPFDVDGIETVSTTRGHRVLGPAEPIAVSDADDYFAKVAGGYVMVDQAVRKQVIW 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A+ VG + D+DLLEE+ LVE F GSFD +L +P E++ T+K NQ+ Sbjct: 230 QQVTAEAARVGGFVRRDEDLLEELTWLVEQPTAFAGSFDPAFLEVPAEVLVTTMKDNQRY 289 Query: 290 FVTRTREG--VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F EG L FI V N + + GN +V+AARL DA FW D+ Sbjct: 290 FPVYKAEGSEELLPYFIGVRNGG-HEHLDIVRAGNEKVLAARLSDARFFWDEDRR----- 343 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 +PL+ ARL VF K+GTQ ERV R+ L + IAQ + Sbjct: 344 ---------------QPLESFNARLKEA--VFQEKLGTQFERVERLVSLSRPIAQALGLS 386 Query: 408 VAL---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 RA L KADL T +V EFPE+QG +GK+Y + Q + + +AI EH PRG Sbjct: 387 PEQEEQAARAAWLCKADLMTRMVFEFPEVQGYMGKQYLLHQGGDPAVAEAIYEHYLPRGA 446 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 +++P I V+LADKLDTL +++I P+GS+DP+ALRRA G+++ ++EN + + Sbjct: 447 GDDLPRTGPGIVVALADKLDTLAGYFSIGLIPTGSQDPFALRRAAQGVVQTLVENGLRVD 506 Query: 525 LSQF----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L+ +L+ FF R+K+ + R+IR+D+I+A+L ++ Sbjct: 507 LAALVSRAIEQYRLPGEAAVKTHSDLMEFFRARVKVLMEQREIRYDVIDAVLAAGFRDVT 566 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 V+ + L + + + KR+ + + +S EI P+ AE+ LY Sbjct: 567 DAVNRAEALAAVMAEPEFAAVTGAFKRVANLAGKANEAG-AVSAEIDPELFTEPAERDLY 625 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 D ++ + + Y L + P++ F D V VNV+D +VR NR +LLQ + Sbjct: 626 GAFVDLRPEMKRAYEAGDYRTFYHLATRLKAPVDAFLDTVRVNVEDEKVRANRYALLQAL 685 Query: 689 KNIILIVINVQKI 701 ++ ++ K+ Sbjct: 686 GGLLSAPADLSKL 698 >gi|75907017|ref|YP_321313.1| glycyl-tRNA synthetase subunit beta [Anabaena variabilis ATCC 29413] gi|75700742|gb|ABA20418.1| glycyl-tRNA synthetase beta chain [Anabaena variabilis ATCC 29413] Length = 716 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 198/744 (26%), Positives = 323/744 (43%), Gaps = 73/744 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L + +++ Y TP RL + + GL Sbjct: 1 MPGFLLEVGTEELPASFLSGAIAQWRSRIPQSLAANSLTSESVEVYGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G A GF + G++ + + KG+ + Sbjct: 61 SQQPDREEEIKGPPAQAAFKDGQPTPAAVGFAKKQGVELEALE--VRPTDKGEFVFVQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + ++L +VP I + + MRW + RP++ ++ +L + Sbjct: 119 TPGRPVAEILTELVPQWIYHLEGKRLMRWGDGD-----VRFSRPIRWLVTLLDEAILPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ L + I+YGHR P PI +Q Y+ L V +D + R I Sbjct: 174 LVNGSL-TVKSDRISYGHRVLHPAPITIQQASDYVNTLRSGYVTVDAKERAAIIKEQVET 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +G DLLEE+ LVEW +G F++++L LP E+ + ++Q+ F Sbjct: 233 TVQKLGGYTEIYPDLLEEVTNLVEWPSPVVGKFEEEFLNLPTEVTTTVMVSHQRYFPVFK 292 Query: 295 --REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L FI VSN + I GN RV+ ARL D F+K D Sbjct: 293 TGDHKELLPYFITVSNGDPT-KSDVIAVGNERVIRARLADGQFFYKTD------------ 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 LSK L+ + +L+ V F +G+ +V RI + KI+ ++ D Sbjct: 340 --------LSKSLESYLPQLET--VTFQEDLGSLRGKVERIVKVAAKISSQLELGESDRQ 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA +L KADL T++V EFPELQG +G++YAV E+ AI EH PRG + +P Sbjct: 390 HIQRATLLCKADLVTQMVFEFPELQGIMGQKYAVASGESPEVATAIFEHYLPRGADDILP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 LAD+LDTL++ + + P+GS DP+ALRRA +I I + I L+ + Sbjct: 450 QTLTGQVAGLADRLDTLVSIFGLGLIPTGSSDPFALRRAANAVINITWAANLQINLASLL 509 Query: 530 ED-----------------QNLILFFHDRLK-LYLHDRDIRHDLIEAILRPEN------- 564 L FF R++ L ++ I +DL+ A+L + Sbjct: 510 AQTVTEFATQYNKDQAPLITALNEFFLQRIRTLLQEEKQIDYDLVNAVLGDNDPEYTERA 569 Query: 565 -DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLL 621 +LL + D +L + +K + R ++ A + +++ + P+ Sbjct: 570 LQDLLDVRDRALYLQQIRRDGTLDKIYETVNRSTRLAAQGDLDTQQLDPTSVLRPELFQK 629 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVR 678 +E Y + Q + + Y + L I + FF D VLV D E++ Sbjct: 630 SSESAFYDALLKLVPQTQAAQQSRNYQLLVAGLVEIAPTVSNFFDGADSVLVIDPDPEIK 689 Query: 679 DNRLSLLQYIKNIILIVINVQKIV 702 NRL++L ++N ++ + IV Sbjct: 690 RNRLNILGLLRNHARVLADFGAIV 713 >gi|237748760|ref|ZP_04579240.1| glycyl-tRNA synthetase subunit beta [Oxalobacter formigenes OXCC13] gi|229380122|gb|EEO30213.1| glycyl-tRNA synthetase subunit beta [Oxalobacter formigenes OXCC13] Length = 694 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 202/725 (27%), Positives = 352/725 (48%), Gaps = 62/725 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLS 60 L+EI +EE+P + K A+ + + LK+E + + Y TP RL + + + Sbjct: 4 TLLVEILTEELPPKALMKLADSFASTIESSLKQEDFLNDTSKTTIYATPRRLAVTITDVR 63 Query: 61 PHSPEKIE-ERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAV 112 SP+K +++ P G + L + + I +++K P K + + Sbjct: 64 DVSPDKTVRQKVLPVNVALDADGNPTAPLKKKLAALNIPDIDISKLEKAPDGKNESFFYT 123 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + L+ V A +P PK M + ++RP+ + + Sbjct: 124 YTAAGLPLASALQKAVEKAAHDLPVPKMMTYQRPDG--ETVEFVRPVHEFIAM-----HG 176 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 E ++ + L + G IT+GHRF + I + + D+Y LE V+ + R+ I Sbjct: 177 ENVLPITLLGLSAGRITHGHRFLSDGDIGILAADYYAVTLETRGKVIPGFQSRKERIRAM 236 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A G +++ + LL+E+ LVEW V+ +F+ +L +P+E + LT++TNQK F Sbjct: 237 LNE--KAKGDKVLMPESLLDEVTALVEWPIVYECNFEDTFLEVPQECLILTMQTNQKYFA 294 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L + F++VSN++ + I+ GN RVV RL DA F+++D+ Sbjct: 295 LTDASGRLRSRFLIVSNMET-NTPQRIISGNERVVRPRLSDARFFFEQDK---------- 343 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 K L+ R+ L +VV+H K+GT +R++R+R+L IA+ + D L Sbjct: 344 ----------KKKLEDRLPGL--ANVVYHNKLGTLAQRMARVRLLSVFIAEKLGYDKQLA 391 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR L+KADL TE+V EFPELQG +G YA E A +EH PR + +PT Sbjct: 392 DRGAQLAKADLLTEMVGEFPELQGIMGTYYARHDGEPEEVALAAQEHYMPRFAGDVLPTT 451 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 ++LADK++TL+ W I +P+G +DP+ALRR LG +RI++E K+ + L + + + Sbjct: 452 ATGTVIALADKMETLVGIWGIGLQPTGDRDPFALRRHALGFLRILIEKKLPLSLREVLAE 511 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + +I FF DRL+ L DR D IEA+L D +++ + Sbjct: 512 TVSILSTNATMKDPTEGVIAFFMDRLRGLLRDRGYTPDEIEAVLSQNPDRFDNLIERLDA 571 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + KRI IL KK+ + ++ P L+ ++EK+L+ ++ Sbjct: 572 VRAFAEMPEAASLAAANKRITNIL----KKSDVNTGQVQPDVLVEDSEKKLFTDMTAVKP 627 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + Y + + + ++ FF V+V DD+++R+NR++LL+ + ++ V Sbjct: 628 QADQKFAAGDYTGTLKTMAQLHDDVDAFFTNVMVMADDQKLRNNRIALLKQLHTMMNQVA 687 Query: 697 NVQKI 701 ++ K+ Sbjct: 688 DISKL 692 >gi|260222391|emb|CBA31908.1| Glycyl-tRNA synthetase beta subunit [Curvibacter putative symbiont of Hydra magnipapillata] Length = 706 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 207/733 (28%), Positives = 347/733 (47%), Gaps = 65/733 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K E + +L LK +G++ + + + +P RL +++ + Sbjct: 4 KNLLVELFVEELPPKALKKLGEAFATVLADSLKAQGLVAADAAVTHFASPRRLAVHVAAV 63 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLA 111 +P + +K + ++L P G A+ L++ G + +K+ K + Sbjct: 64 APQAADKAVSQKLMPVAVGLDASGNATPALLKKLQALGADASAVPALKRAKDGKAEALFY 123 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS----PISAFSWIRPLKSILCILV 167 + D L+ + I K+P PK M + ++ S++RP ++ + Sbjct: 124 DSMVKGATLVDGLQKALLETIAKLPIPKVMSYQLQSGCELPGWTSVSFVRPAHGLVALHG 183 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRR 225 ++ ++ + + GN T GHRF A P+ + D Y L + V+ RR Sbjct: 184 SD-----VVPVQALGLQSGNRTEGHRFEAAVSPVVIADADAYAATLAKDGAVIASFAERR 238 Query: 226 NAILNDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 I+ A+ VG + +ED LL+E+ LVE V + F+ ++L +P+E + LT+ Sbjct: 239 AEIVRQLDAAAAQVGGGCKPIEDDALLDEVTALVERPNVLICEFEAQFLEVPQECLILTM 298 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 K NQK F G L N F++VSNI+ D + ++ GN RVV RL DA F+ +D+ Sbjct: 299 KANQKYFPLLDAAGKLTNKFLVVSNIKPDDA-SFVIGGNERVVRPRLADAKFFFDQDR-- 355 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 K L R+ L VV+H K+GTQGERV R+R + K IA Sbjct: 356 ------------------KKTLASRVEGLG--KVVYHNKLGTQGERVERVRAIAKAIASQ 395 Query: 404 IDAD--VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 I V D+A L+K DL T++V EFPELQG +G YA+ + AIE+H KP Sbjct: 396 IGDATLVVQADQAAQLAKTDLVTDMVGEFPELQGIMGGYYALNDGLGETVAHAIEDHYKP 455 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P N + V+LADKL+TL+ + I P+G KDP+ALRR LG+IR+++E + Sbjct: 456 RFAGDALPRNTAGLVVALADKLETLVGMFGIGNLPTGDKDPFALRRHALGVIRMLVEKDL 515 Query: 522 DIPLSQFIEDQ-------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + +S ++ L+ F DR L ++ ++A+L L Sbjct: 516 PLDVSALVQSAVPAFGSLITDASVALVDFMFDRFAGSLREKGYSAQEVDAVLALRPQRLG 575 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + F + + + KRI IL KK ++ +S L AEK L+ Sbjct: 576 DVAKRLVAVRAFAALPESPALAAANKRISNIL----KKTDDVDAHVSEVLLQEAAEKALF 631 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A + Q Y L ++ P++ FF+ V+VN + ++R NRL LL+ + Sbjct: 632 AAMQTVLPQAQGQWQAGDYTASLQSLAALRAPVDAFFEDVMVNAEQMDLRLNRLGLLKSL 691 Query: 689 KNIILIVINVQKI 701 + V ++ K+ Sbjct: 692 HVAMNRVADLSKL 704 >gi|310643034|ref|YP_003947792.1| glycyl-tRNA synthetase beta subunit [Paenibacillus polymyxa SC2] gi|309247984|gb|ADO57551.1| Glycyl-tRNA synthetase beta subunit [Paenibacillus polymyxa SC2] Length = 691 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 336/733 (45%), Gaps = 74/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI EE+PAR A + L + L + Y + Y TP RL + +K + Sbjct: 1 MSKDLLFEIGLEEVPARFIPNAIQQLKERMTAWLDSSRIAYSAVEAYATPRRLAVLVKEV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF RS G+ K+ + A Sbjct: 61 AEKQEDINEEVKGPSRKIALDEAGNWSKAALGFARSQGVDPEQ--FTFKELGGVEYIYAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 DVL + + + +PK MRW++ F ++RP++ ++ + ++ Sbjct: 119 KSSIGVPTADVLSEGLLHILHAMTFPKFMRWASYD-----FKFVRPIRWLVALFGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I++L++ + GN+T GHRF + V+S Y+ L + V++D E R++ I+ Sbjct: 171 --IVNLEIAGVQSGNVTRGHRFLGQEAV-VESPADYVEVLRKQHVIVDIEERQSLIVKQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ + DLLEE++ LVE V G FD +L +P++++ +++ +Q+ F Sbjct: 228 EALAAEKDWTIAVKDDLLEEVLYLVETPTVLFGGFDPAFLNIPKDVLITSMREHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R G L F+ V N + I +GN +V+ ARL DA F++ DQ Sbjct: 288 LDRTGKLLPYFVTVRNGGS-QSLEVIAKGNEKVLRARLSDAKFFYEEDQK---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L+ + A + +VFH ++GT G++V RIR + +A+ + + Sbjct: 337 ------------LEIKDALSKLESIVFHEELGTVGDKVRRIRRIADALAEKLRVSPDTQE 384 Query: 413 ---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA + K DL T++V EFPELQG +G++YA E A+ EH +PR E VP Sbjct: 385 SVSRAADICKFDLVTQMVYEFPELQGVMGEDYARKAGEKEEVARAVFEHYQPRFAGETVP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + VS+ADK+DT+ ++I P+GS+DPYALRR GI++I+L+ K+ LS Sbjct: 445 STNAGAIVSIADKIDTITGCFSIGIIPTGSQDPYALRRQAAGIVQILLDRKLSATLSDVF 504 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + L FF R+K L + +R+D+++A+L D++ ++ Sbjct: 505 NIALDVHSNFGNMKRSADEIRKELHEFFGLRVKKLLSE-TLRYDVVDAVLSAGYDDVASV 563 Query: 571 VDLIKHL-NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 V+ L + + + S R+ + A + ++ + EK LY Sbjct: 564 VNRGAALMTAVLTGDVFKATVESFNRVGNLAAKA------VHKSVNTGEFTEQGEKNLYE 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++ Q L SI + FFD V+V +D VR+NRL+LL I Sbjct: 618 AWYGAYESYCTALQEGDATQALALASSITPAVTAFFDSVMVMAEDDAVRNNRLALLAAID 677 Query: 690 NIILIVINVQKIV 702 + + + K+V Sbjct: 678 SELKRFADFSKLV 690 >gi|261250632|ref|ZP_05943207.1| glycyl-tRNA synthetase beta chain [Vibrio orientalis CIP 102891] gi|260939201|gb|EEX95188.1| glycyl-tRNA synthetase beta chain [Vibrio orientalis CIP 102891] Length = 688 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 202/703 (28%), Positives = 330/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + +Q ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEVELKGADLAHQGVKWYAAPRRLALKVSAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++K D KG+ L Sbjct: 61 AEGQADKVVEKRGPAVSVAFDADGIATKAAQGWARGNGITVEQADRLKTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQATSEIVVELAAKALGNLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF ++S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 SQKAAAAVGGTADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDDNNKLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDELPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ I Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++I F R + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNDNVETDVIEFMLGRFNAWYKDEGFSVDIIQAVLANRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELAAEIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLAGLREPVDAFFDNVMVMADDEALKK 664 >gi|296107432|ref|YP_003619132.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila 2300/99 Alcoy] gi|295649333|gb|ADG25180.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila 2300/99 Alcoy] Length = 688 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 197/722 (27%), Positives = 356/722 (49%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ D K KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSAGNPTPALLGFAKSCGVTV--DALTKTQTDKGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V +++ +P K MRW + RP+ + + +E K Sbjct: 122 EGTKTKDLLPGLVSQSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHK- 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 176 ----ILGVTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AAPLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI VSNI +S+ ++ GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLPYFITVSNIASSNPKQVVL-GNEKVMRARLSDAAFFFKQDK-------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + V+F K+G+ ++V RI+V+ ++Q ++ L +RA Sbjct: 337 ------KQPLSAHIP--STEQVIFQVKLGSVYDKVQRIKVMMDHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAVVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SL D++DTL+ +AI +KP+G KDP+ LRR L ++R+++ + LS I++ Sbjct: 449 ALSLVDRMDTLVGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKVD--IKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ EP++ FFD V+V V++ ++ NRL+LLQ ++ ++ V ++ Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNRLALLQRLQELLQGVADIS 686 Query: 700 KI 701 + Sbjct: 687 ML 688 >gi|298528170|ref|ZP_07015574.1| glycyl-tRNA synthetase, beta subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298511822|gb|EFI35724.1| glycyl-tRNA synthetase, beta subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 695 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 206/729 (28%), Positives = 341/729 (46%), Gaps = 64/729 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDF+LEI EE+PAR + D L L+ + + + +R + TP RL Y+ GLS Sbjct: 1 MPDFVLEIGFEEMPARFLKQITIDFRQSLDKELETQMLDHGQVRTWSTPRRLCAYVSGLS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 K E GP V G KA GF RS + + ++ +KG Sbjct: 61 EVQTSKEEIVTGPPVAVGLDEQGGYTKAGQGFARSQQVDV--QELMIQETEKGRYLAVQK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + D+L I A+ + +PK MRW F++ RP++ IL + E Sbjct: 119 KVGGAQTRDILPQICTEAVNSLGFPKKMRW------WDRFTFGRPIRWILAKM-----DE 167 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDA 232 ++I+ + ++ ++TYGHR P P +V Y R + E A V+LD + R++ I ++A Sbjct: 168 QVINFQIADVKSADMTYGHRVLGPGPFRVDQAKDYFRIIREEAGVILDFQERKDIITSEA 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA + ++VE++ L E L E+ +GSFD YL LP E++ +++++QK F Sbjct: 228 SNLAREIQGKVVENEKLASENANLAEFPGPVLGSFDPGYLELPREVLLTSMESHQKSFGV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 E L F+ V N + D I +G RV+ ARLEDA FW D+ Sbjct: 288 VDDEDRLLPSFVAVINNRP-DSRGLIRKGWERVLKARLEDARFFWNSDK----------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALV 411 + D+ M +L+ VVF A +G+ GE+ R+ + + + AD V Sbjct: 336 ---------AASFDEWMQKLE--KVVFMAPLGSMGEKSRRLERISGFLCDRLQSADKKDV 384 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +A + KADL +E+V EF +LQG +G YA N + A+ EH P GP + P+ Sbjct: 385 QKAAFICKADLVSEMVGEFADLQGIMGGIYASHAGYNDNVARAVYEHYLPLGPDSDTPST 444 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 VSLADK+D L+ + ++ P+G+ DPYALRR LG+IRII+++ + + + + Sbjct: 445 PEGALVSLADKMDNLVGCFGLDMLPTGAADPYALRRQALGVIRIIIKHGLRLDIEELISF 504 Query: 529 ---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + L+ FF RLK Y + + L++A+L+ ++ Sbjct: 505 TAKSYTGATWKQDPEQALEKLMQFFATRLKAYWQGQGFQGKLVDAVLQSGFSDIYAAQGR 564 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAI-EEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + + EF E +L+ KR+ I+ + + P L + E +L I Sbjct: 565 LDAIREFSLDENFEAAVLTYKRVDNIIRKQAGDAGVSLKQDYDPGLLQEDPEIKLDRAIR 624 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + ++ + + + L+++ ++ FFD V+V D ++R NRL LL ++ Sbjct: 625 EIMNDWDTLWQNEDFSSLFNKLNALRPSVDDFFDHVMVMCQDEKLRQNRLGLLNFLSLKF 684 Query: 693 LIVINVQKI 701 + + + Sbjct: 685 KKLADFSAL 693 >gi|187931538|ref|YP_001891522.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. mediasiatica FSC147] gi|187712447|gb|ACD30744.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. mediasiatica FSC147] Length = 694 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 205/727 (28%), Positives = 371/727 (51%), Gaps = 65/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVA--TPKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P K MRW + S+ ++RP+ +L + + + Sbjct: 124 SGQATVNLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLALYGND-----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + + ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQSKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ ++ GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSK-KPELVISGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIVVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDF 634 +F++S K + + S KR+ IL+ K + + + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILS---KNATDKDYYYNIELAKAAANEYELALAYSIEEV 627 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + Sbjct: 628 AADLHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVNLHKMFIG 687 Query: 695 VINVQKI 701 + ++ K+ Sbjct: 688 IADISKL 694 >gi|242279452|ref|YP_002991581.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio salexigens DSM 2638] gi|242122346|gb|ACS80042.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio salexigens DSM 2638] Length = 697 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 206/730 (28%), Positives = 358/730 (49%), Gaps = 64/730 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DF+LEI EE+PAR + D+ I LL+E+ + ++ Y TP RL +++K ++ Sbjct: 1 MADFILEIGIEEMPARFVPRLGLDIKDIFSSLLEEKMIDNASVETYATPRRLTVFVKDMA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EE GP G KA+ GF++S G+ ++ D KGD A Sbjct: 61 AVQRKVEEEVSGPPARIAYDADGNPTKALTGFVKSQGIALEDVYTLETD--KGDYLAAKK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 D+L I AI+K+ +PK M+W F++ RPL+ +LC+ + Sbjct: 119 TVGGGETIDILPEICVTAIKKLSFPKKMKWGNLD-----FAFGRPLRWLLCLFGTD---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDA 232 +++ ++ +P G TYGHR P +V S D Y ++E V++ PE R + + Sbjct: 170 -VVEFEMAGMPSGRQTYGHRVMGAGPWEVASADDYFDVIKEKSSVIISPEARGEHVRKEG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +LAS + +V LLEE+ LVE +G+FD+ +L LP+E++ +++++QKCF Sbjct: 229 DKLASELKGSVVWKDSLLEEVSNLVELPVPIIGNFDESFLELPKEVLLTSMESHQKCFGI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + +G L F+ N+ +D + +G +V+ ARLED FWK D Sbjct: 289 QKEDGELLPHFLCTLNLVPTDV-ELVRKGWEKVLRARLEDGRFFWKND------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LV 411 L D + +LD +VVF +G+ G++ R+ L IA DA + + Sbjct: 336 --------LKTDFDTWLDKLD--NVVFLGPLGSMGDKSRRMERLAALIAGKTDASLQTEM 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L+KADL +E+V EF +LQGK+G YA E+ C A+ E P GP VP+ Sbjct: 386 ARAGRLAKADLVSEMVNEFDKLQGKMGGIYASKCGEDDVVCKALYEQYLPAGPESPVPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 + VS++DK DTL+ + +N+ P+G+ D YALRRA LGI+R+I++ + + + + ++ Sbjct: 446 LGGVIVSMSDKADTLVGCFGLNKIPTGANDTYALRRAALGIVRMIIQYDLRVDILEIMDM 505 Query: 532 -------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + L F +RL+ Y + +++A L ++ + Sbjct: 506 AFEGYSKDIKWKLEKSELLEKLGEFISNRLRAYFTGKGYETRVVDAALGAGYRDVTALKA 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAI-EEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ L EF + E+ +L+ KR I+ ++ ++ L EK L + Sbjct: 566 RVEALAEFAKADGFEQAVLTFKRAANIIKKQGSEQGVSLTGGFEVDKLEEAQEKELATKL 625 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +E ++ + ++ +L + ++ FFD V+V +D+ +R NRL+LL+ + + Sbjct: 626 DETAARFEELWENDEFSKLFAILGELRPYVDDFFDNVMVICEDKGLRMNRLNLLKALVDR 685 Query: 692 ILIVINVQKI 701 + + + + Sbjct: 686 LSRLADFGAL 695 >gi|212702604|ref|ZP_03310732.1| hypothetical protein DESPIG_00630 [Desulfovibrio piger ATCC 29098] gi|212674045|gb|EEB34528.1| hypothetical protein DESPIG_00630 [Desulfovibrio piger ATCC 29098] Length = 696 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 198/730 (27%), Positives = 321/730 (43%), Gaps = 65/730 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI SEE+PAR +L+ L+E V + + TP R + ++ ++ Sbjct: 1 MATFVLEIGSEELPARFLAGEEAELAARFTAALQEASVEHGALHTMSTPRRAIVIIEDVN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E+ EE GP V G KA++GF R+ G+ +I +KG+ Sbjct: 61 PVQQEREEEVAGPPVRVAFAADGKPTKALEGFARTNGVSVDDVYRI--TTEKGEYVAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R + D+L I P I +P+ K MRW + + ++ RPL+ I+ +L + Sbjct: 119 RIGGAAVADLLAEICPAVITSLPFGKRMRWGS-----NTLAYARPLRWIVALL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDA 232 ++ + + G T GHR H P V + + L ++ + D RR I+ Sbjct: 169 AVVPFTVGPVASGRETMGHRIHGHGPFSVAHANELLAVLADKGGLTPDAADRRKVIVEGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A+A+G +++ LL E+ GL E + FD YL +P E++ +++++QK F Sbjct: 229 DAQAAAIGGKVLWRDGLLGEVQGLTEHPVPLLADFDPSYLEVPREVLLTSMESHQKSFGI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V NI D + + G RV+ ARLEDA FW D + Sbjct: 289 EAADGTLMPHFLTVLNISPEDM-SLVKHGWERVLRARLEDARFFWHADLRD--------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 D + +LD V+F ++GT GE+ R+ L + +A+ + Sbjct: 339 -----------NFDYWLEKLD--HVIFIGRLGTMGEKTRRLEALCRWLAENVAQGKVSAE 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA LSKADL T +V EF LQG +G YA + E A+ E P GP VP Sbjct: 386 DAARAGRLSKADLVTGMVGEFDTLQGIMGGIYAERKGETPVVAQALREQYLPAGPDSPVP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ADK DTL+ + + P+G+ DP ALRR LGIIRI LE + + Q Sbjct: 446 ASLCGALLSMADKADTLVGCFGLGMIPTGAADPNALRRCALGIIRIGLEFDLHFDIRQLF 505 Query: 530 ED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 L+ FF R++ Y +R L++A L ++ Sbjct: 506 ARAHELYGDRQWKLAPQEALDKLLDFFAGRVRNYWQNRGEDSLLVDAALGAGVADVCQCG 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L +F A + + + KR+ I+ + + ++ L +AEK L A + Sbjct: 566 ARLAALAQFSKEAGYAEAVQTFKRVANIVRKQGAAEQ-LAAAWQADLLQEDAEKALAATL 624 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 D + + + L + ++ FFD V+V DD +R NRL++L + Sbjct: 625 DDLLPRLDSLWEAGDHTAALKTLLEVRPVVDAFFDGVMVMCDDAALRANRLAMLNALGTR 684 Query: 692 ILIVINVQKI 701 + + + Sbjct: 685 FARLADFAAL 694 >gi|163798103|ref|ZP_02192041.1| Glycyl-tRNA synthetase [alpha proteobacterium BAL199] gi|159176640|gb|EDP61216.1| Glycyl-tRNA synthetase [alpha proteobacterium BAL199] Length = 701 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 246/727 (33%), Positives = 370/727 (50%), Gaps = 82/727 (11%) Query: 29 LIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAGKKAIDGFLRS 88 + LK G+ + Y TP RL L + GL P++ EER GP+VG+ KA+ GF+++ Sbjct: 1 MTAKLKAGGLTFATAEAYVTPRRLALVVDGLPASQPDRTEERKGPKVGSPDKALQGFMKA 60 Query: 89 TGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS 148 G++TI +++ KGD Y AV P +E L + AI ++PWPKSMRW Sbjct: 61 AGIETIEQAEVR-SSDKGDFYFAVRHIPGAPLERYLPYPLFEAISEMPWPKSMRWGRND- 118 Query: 149 PISAFSWIRPLKSILCILVAEDAK----------EKIIDLDLKEIPCGNITYGHRFHAPH 198 F W+RPL IL ++ + E I + GHRF AP Sbjct: 119 ----FRWVRPLHGILAMVDGKTLDLDFQLLRTQEEARNPTPAGTIKASGESRGHRFLAPE 174 Query: 199 PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVE 258 P V S Y L +A V+LD E R+ I + LA GL ED+ LLEE+ GLVE Sbjct: 175 PFAVASFADYRAKLRDAFVILDREERKRIIADGIAALAKEAGLVAKEDQGLLEEVCGLVE 234 Query: 259 WVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAI 318 W +G D +++ +P+E++ +++++QK F T +G LA+ F++V+N+ + A Sbjct: 235 WPVPMLGRIDAQFMGVPKEVLVTSMRSHQKYFALETADGALADRFVVVANMASEPTRDAT 294 Query: 319 V-QGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDV 377 + GN +V+ ARL DA FW +D L PL R L V Sbjct: 295 IVAGNEKVLRARLSDAKFFWDQD--------------------LKTPLANRREALRT--V 332 Query: 378 VFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKI 437 F+ ++GT ++V R L +I + I AD LV RA LSKADL T +V EFPELQG + Sbjct: 333 KFYDRLGTMADKVQRFAQLAVEIGERIGADGDLVRRAATLSKADLTTGMVSEFPELQGIM 392 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G+ YA+ E+ S +AI EH P GP + PT +S+ V+LADK+DTL+ F+AI E P+ Sbjct: 393 GRYYALDAGEDPSVGEAIAEHYSPLGPSDRCPTAPVSVAVALADKIDTLVGFFAIGETPT 452 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------------------- 530 GSKDP+ALRRA LG+IR+I+EN + +PL Sbjct: 453 GSKDPFALRRAALGVIRLIIENNLRVPLVDLFASAFGRLPRDVVDASLESAAAKLGGGEV 512 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIK 575 Q L+ FF DRLK++L ++ +RHDLI A+ + D+L+ ++ + Sbjct: 513 PAGWYTEFTVLPFIRQELLGFFADRLKVHLREQGVRHDLIAAVFELGDEDDLVRLLARVH 572 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDF 634 L +F + G L +R IL EEKK+ S E L+L E LY ++ Sbjct: 573 ALADFLGTEDGANLLTGFRRASNILRAEEKKDGVSHSAEPEAHRLVLSEETALYEALAAA 632 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ ++ + + L ++ PI+ FF++V VN DD ++R NRL +L +++ + Sbjct: 633 EPVLESALKAEDFAGAMATLATLRSPIDAFFEKVTVNADDADLRVNRLRILAQVRDAMGR 692 Query: 695 VINVQKI 701 V + ++ Sbjct: 693 VADFARV 699 >gi|310659074|ref|YP_003936795.1| glycine tRNA synthetase subunit beta [Clostridium sticklandii DSM 519] gi|308825852|emb|CBH21890.1| glycine tRNA synthetase, beta subunit [Clostridium sticklandii] Length = 687 Score = 568 bits (1463), Expect = e-159, Method: Composition-based stats. Identities = 226/722 (31%), Positives = 364/722 (50%), Gaps = 64/722 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI +EEIPAR K D+ L LKE + Y+++ TP R + + L+ + Sbjct: 5 LLFEIGTEEIPARFIAKTKADMKGYLEKTLKELHIEYKSIELKCTPRRFVVVIDELAENQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 EE GP KA+ GFL+ + K K + L K Sbjct: 65 ATVEEELKGPAKKIAFDENNNPSKALLGFLKGKDISPEE--VYFKTVGKDEYAHIKLTKE 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++ +LK I I+ +PKSMRW ++RP++ +C++ E++I Sbjct: 123 GQAVKGLLKDIFEGMIKSTTFPKSMRWG-----GKNIRFVRPIRYFVCLM-----DEEVI 172 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I GNIT GHRF I + + D Y L+E V+LD E R++ IL +A Sbjct: 173 DFEIEGIKTGNITKGHRFLGSSEIVINTPDEYEAKLKENFVILDDEQRKSLILEQCKAVA 232 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++G L+ D+DLLEE+ +VE+ F G FD+ YL LP+E I +K +Q+ F + Sbjct: 233 DSLGGTLMMDEDLLEEVNYIVEYPTAFYGEFDESYLSLPKEAIITPMKEHQRYFPVLDAD 292 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L N FI V N + + +GN +V+ ARL DAL F+ D Sbjct: 293 GKLLNKFITVRNGDS-YAIDNVKRGNEKVLDARLSDALFFYHEDT--------------- 336 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 KPL+ + RLD +VF K+GT ++ RI+ L +KIA+ + + +DRA Sbjct: 337 -----KKPLEAYVERLDT--IVFQQKLGTILDKTKRIQNLSEKIAKALALTLPNLDRAAY 389 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 LSKADL T +V EF ELQG +G+ YA L NE +AI EH PR + +P+ I Sbjct: 390 LSKADLTTAMVFEFTELQGIMGRYYANLSNEPSEVAEAIYEHYLPRFAGDELPSTNEGII 449 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 ++L+D+LD++ F+AI +P+GS+DPYALRR LGI+ I++E K+D+ L ++ Sbjct: 450 LALSDRLDSVAGFFAIGIQPTGSQDPYALRRQALGILNIMMEKKLDVRLFDLLDLALENF 509 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +L+ FF RLK D IR+D+++AI+ E+ N ++ K L+ + Sbjct: 510 DFEDMDKQSVKSDLMSFFELRLKNLFTDMGIRYDVVDAIINIEDSNPFDLLIRAKDLDAW 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + L + RI I ++ ++ ++E +L + ++ Sbjct: 570 VKNNSVTEALQTFSRISNISKEA------VAGKVDEALFAHDSEAKLNTAYNSIKAEVEA 623 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + + Y + +LL SI + ++ FFD V++ ++ ++R NRL++L I+ + V ++ K Sbjct: 624 MLARREYVKALELLISIKDSVDAFFDSVMIMDENMDIRANRLAMLSNIRTTMESVADLSK 683 Query: 701 IV 702 IV Sbjct: 684 IV 685 >gi|94309391|ref|YP_582601.1| glycyl-tRNA synthetase subunit beta [Cupriavidus metallidurans CH34] gi|93353243|gb|ABF07332.1| glycine tRNA synthetase, beta subunit [Cupriavidus metallidurans CH34] Length = 707 Score = 568 bits (1463), Expect = e-159, Method: Composition-based stats. Identities = 204/737 (27%), Positives = 344/737 (46%), Gaps = 72/737 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLK 57 M D L+E+++EE+P + + E + L L ++ + TP RL + Sbjct: 5 MTDSLLIELFTEELPPKALARLGEAFAQGLFDGLGARDLLEAGATVTPFATPRRLGALVS 64 Query: 58 GLSPHSPEKIE-ERLGP------RVGAGK----KAIDGFLRSTGLQTISDCQIKK-DPKK 105 G+ +P++ + E++ P GA K + +S G+ I +++ K Sbjct: 65 GVRRTAPDREQREKVLPLTVALDANGAPTAPLGKKLAALAKSVGVAEIDWQTLERASDGK 124 Query: 106 GDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCI 165 D + + D L+ + + K+P PK M + + ++RP S++ + Sbjct: 125 ADAFFYRYTARGATLADGLQAALDETLTKLPIPKVMSYQRPDG--TTVHFVRPAHSLIAL 182 Query: 166 LVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECR 224 AE I+ + + N+T GHRF + I++ Y LE V+ R Sbjct: 183 YGAE-----IVPVSALGLQASNLTQGHRFLSQGTIEIPHAAEYAGLLESRGRVVASYADR 237 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 R I + A A +++ LL+E+ LVEW ++ F++ +L +P+E + LT++ Sbjct: 238 RERIRTALLKEAGAD--KVIMPDSLLDEVNSLVEWPVIYPCHFEEAFLAVPQECLILTMQ 295 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 TNQK F EG L N F++VSN+ A+D +I+ GN RVV RL DA F+ +D+ Sbjct: 296 TNQKYFALTDAEGHLRNRFLIVSNL-ATDTPQSIITGNERVVRPRLADAKFFFDQDR--- 351 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 K L R+ +L +VV+H KIG Q +RV R++ + +A + Sbjct: 352 -----------------KKTLASRVPQL--ANVVYHNKIGNQLDRVQRLQQIAGHLADAM 392 Query: 405 DA-----DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 +A D A R L+KADL T++V EFPELQG +G YA +E A EH Sbjct: 393 NATGAPVDKAAAMRGAELAKADLLTDMVGEFPELQGTMGTYYARHDDEAEDVALACSEHY 452 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 +PR + +P +S V+LADKL+TLI W I +P+G KDP+ALRR LGI+R+++E Sbjct: 453 RPRFAGDALPAGNVSTAVALADKLETLIGIWGIGLQPTGEKDPFALRRHALGILRMLIEK 512 Query: 520 KIDIPLSQF---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + +PL+ + + F DR++ YL D+ + +EA++ Sbjct: 513 PLALPLNDVLGLTEQAFAGIAAVKPSREAITDFLFDRVRGYLKDKGYTTNEVEAVVSLRP 572 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 L I+ ++ + F + + E + KRI IL KK E + AE Sbjct: 573 QQLHDILARMEAVRTFAALPEAEALAAANKRITNIL----KKTDEAIGSVDVSLFQEAAE 628 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ I ++ + + L + + ++ FF+ V+V +D ++R NRL+L Sbjct: 629 GALHEAIERVRPGVEAAFAGGDFTAALRDLAQLRDAVDRFFNDVMVMAEDAKLRANRLAL 688 Query: 685 LQYIKNIILIVINVQKI 701 L + + V ++ K+ Sbjct: 689 LATLHGLANRVADISKL 705 >gi|221135260|ref|ZP_03561563.1| glycyl-tRNA synthetase subunit beta [Glaciecola sp. HTCC2999] Length = 689 Score = 568 bits (1463), Expect = e-159, Method: Composition-based stats. Identities = 191/700 (27%), Positives = 332/700 (47%), Gaps = 60/700 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 L+E+ +EE+P + + L + + Y ++ +P RL + + GL+ Sbjct: 5 TLLIELGTEELPPKSLKTLGTAFGTNIQKELDDSQLAYSEVKWLASPRRLAVLVSGLAYQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V G KA G+ R G+ ++ D KG+ L + Sbjct: 65 QADSVVEKRGPAVSAAFDAEGNPTKASMGWARGNGIDVADAERLVTD--KGEWLLYKAQV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +++ IV ++ K+P PK MRW ++ + +IRP+ + + +KI Sbjct: 123 TGQALDGLIEGIVSRSVTKLPIPKMMRWGSSDT-----QFIRPVHTFTAMY-----GDKI 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + ++P N+ GHRFH P ++ D Y+ + V++D R I ++ Sbjct: 173 LPATILDMPSNNVIQGHRFHGPATFTLEHADQYVEMCRKHFVVVDYAEREAQIAAGLNKQ 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +GLE ++ LLEEI LVE+ V SF++++L +P+E + T+K +QK Sbjct: 233 ADTLGLEADYNQALLEEIASLVEFPVVLQASFEERFLAVPKEALIYTMKDDQKYVPLLDG 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L++ F+ VSNIQ+S +++GN +V+ RL DA F+ D+ Sbjct: 293 QGQLSSTFLFVSNIQSS-APQHVIEGNEKVIRPRLADAEFFFNTDK-------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L R+ L ++F ++GT E+ RI + IA I+A+ RA Sbjct: 338 ------KHSLASRLESLQ--SILFQKQLGTLAEKARRIEHVAAHIAVAINANAEHAARAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL TE+V EFP++QG +GK YA+ E+ S AI E PR +N+P++ +S Sbjct: 390 LLAKTDLMTEMVMEFPDVQGVMGKYYALHDGEHESVAQAIAEQYMPRQSGDNLPSSDVSA 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------- 528 V+LADKLDTL + I P G KDP+ALRRA++G++RII E D+ + + Sbjct: 450 AVALADKLDTLAGIFGIGMLPKGDKDPFALRRASIGVLRIISERSYDLDVRELLSVAVEA 509 Query: 529 --------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 N F R + D+ I D+I+A+ + + F Sbjct: 510 YGDKLSNADTLDNATDFVLARFRAMYQDQGIDTDVIQAVNARNVSKPTDFAARVHAVAAF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA K N +++++ L E+ L+ I+ + Sbjct: 570 KALPQALALAAANKRVANILA---KNNVADAVDVNESLLNETQERDLFEQITQQQATVNH 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 +++ Y + L ++ ++ FFD ++V DD +R N Sbjct: 627 ALNTNDYTTVLSSLATLQPVVDAFFDNIMVMSDDSALRQN 666 >gi|134301720|ref|YP_001121688.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. tularensis WY96-3418] gi|134049497|gb|ABO46568.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. tularensis WY96-3418] Length = 694 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 205/727 (28%), Positives = 370/727 (50%), Gaps = 65/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVA--TPKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P K MRW + S+ ++RP+ +L + + + Sbjct: 124 SGQATVNLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLALYGND-----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + + ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQSKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSK-KPELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDF 634 +F++S K + + S KR+ IL+ K + + + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILS---KNATDKDYYYNIELAKAAANEYELALAYSIEEV 627 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + Sbjct: 628 AADLHKYLNNREYSYALELLTCLDKVISKFFENVMVIDEDIKIRENRLALLVNLHKMFIG 687 Query: 695 VINVQKI 701 + ++ K+ Sbjct: 688 IADISKL 694 >gi|15613934|ref|NP_242237.1| glycyl-tRNA synthetase subunit beta [Bacillus halodurans C-125] gi|11387198|sp|Q9KD48|SYGB_BACHD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|10173987|dbj|BAB05090.1| glycyl-tRNA synthetase beta chain [Bacillus halodurans C-125] Length = 693 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 200/735 (27%), Positives = 341/735 (46%), Gaps = 77/735 (10%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFLLEI EE+PAR + L+ + LKE+ + ++ + + TP RL + + G Sbjct: 1 MSKRDFLLEIGLEELPARFVSDGEKQLADKVESFLKEQRISFEQISSFSTPRRLAVLVIG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ + EE GP G KA GF R G+ ++ K + A Sbjct: 61 LAEKQADVEEESRGPAKKIALDESGNWTKAAQGFARGQGVSVDD--LYIQEVKGTEYIFA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L + I + +PK+MRW T + + RP++ ++ + E Sbjct: 119 KKFVAGQETASLLPE-LKELITSLHFPKNMRWHTY-----SLRYARPIQWLVALYGQE-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I ++ + G T GHRF + + + Y L + V+ D E R+ AI + Sbjct: 171 ---VIPFEITGVAAGLETAGHRFLGEN-VTIDEPTLYKEKLLQQYVMADSEERKKAIRHQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + D+DLL+E+ LVE+ G FD+ +L LP E++ +++ +Q+ F Sbjct: 227 IQSIMEEKDWVIPIDEDLLDEVTNLVEYPTALFGRFDEAFLSLPNEVLITSMREHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + + G L F+ + N IV+GN +V+ ARL DA F+ DQ Sbjct: 287 VKNQAGELLPYFVTIRNGDHRH-LENIVKGNEKVLRARLSDAAFFYGEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---V 408 +D+ RLD +V+H ++G+ G+++ R++VL IA+ + + Sbjct: 338 ------------NIDEANKRLDQ--IVYHEELGSIGDKIKRVKVLAASIAEKLGVTSQTL 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 ++R + K DL T++V EFPELQG++G+ YA + E I EH PR + Sbjct: 384 QAINRVAEICKFDLVTQMVGEFPELQGRMGEVYAEIAGEPPEVAKGIVEHYLPRFAGDQS 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK-------- 520 P++ VSLADKLDT+ + I P+GS+DPYALRR G+++I+L+++ Sbjct: 444 PSSVQGTVVSLADKLDTIAACFGIGLIPTGSQDPYALRRQAAGVVQILLDHELDLDVDEL 503 Query: 521 -------------IDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + +P S+ ++ L FF R+K L D +R+DL +A+L N+ Sbjct: 504 LLETVEQLQEKELLTVPESEVVK--QLREFFALRVKTKLQDEGVRYDLTDAVLASGISNV 561 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + K L ++ + ++ + R+ I EK ++ I+P E E+ L Sbjct: 562 PVVFKKAKLLVSKVNTPEFKELVEGLSRVTNIAGKAEK-----NVAINPDLFEKEEERVL 616 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 Y +Q ++ L EPI +F+ V+V VD++ +++NRL+L+ Sbjct: 617 YEAYVQTKDLVQGALASGDVSAAYAALEQTIEPIHQYFEHVMVMVDEQVIKENRLALMHA 676 Query: 688 IKNIILIVINVQKIV 702 +I N Q+IV Sbjct: 677 FAGVIGSYANFQEIV 691 >gi|225872264|ref|YP_002753719.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium capsulatum ATCC 51196] gi|254781841|sp|C1F1J0|SYGB_ACIC5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225792055|gb|ACO32145.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium capsulatum ATCC 51196] Length = 706 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 202/737 (27%), Positives = 346/737 (46%), Gaps = 68/737 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKG 58 M +FL EI EEIPARM A +L+ + LL+ E ++ + + +Y TP RL + + G Sbjct: 1 MAEFLFEIGLEEIPARMIAAAESELARRVAELLQREDLLAEGHAVTRYSTPRRLAVLVTG 60 Query: 59 LSPHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++ E+ GP + G A F + G++ + ++ KG+ A Sbjct: 61 VKAAQADREEQLTGPAWSIAFKDGQPTPAAQAFAKKAGVEVAALQKV--TTPKGEYVGAS 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + R ++L +P I + WPK+M W ++RP++ ++ +L Sbjct: 119 SVRKGRAANEILLEALPKEIAAIYWPKNMYWRAGK----PERFVRPVQWMVALL-----G 169 Query: 173 EKIIDLDLKEIPCGNITYGHR-FHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E++I ++ + N+TYGHR H P+ + + Y LE A V D E RR+ I Sbjct: 170 EQVIPVEFAGVTAANVTYGHRILHGDAPVAIPAPMEYAATLEAAKVQADVEARRHRIRKA 229 Query: 232 AHRLASAV-GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + V G ED+ L++ + L EW V +GSF+ ++L LPEE++ ++ +QK F Sbjct: 230 LDHVTRTVPGARWREDEALVDAVTHLTEWPSVLLGSFETEFLALPEEVLVTVMRDHQKYF 289 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIV-QGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 G LA F+ N + SD AAI+ GN RV+ AR DA FW DQ Sbjct: 290 AVEDAAGKLAPHFLTALNTEPSDQAAAIIRHGNERVLRARFNDARFFWTVDQ-------- 341 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI----- 404 L R+ L V FH ++G+ ++ R + K++ + Sbjct: 342 ------------KISLANRLEMLQ--SVTFHKELGSYHQKTHTTREIAVKLSAQVRHAGT 387 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D A + RA+ L+K DL TE+V+EF ELQG +G YA Q E + AI P Sbjct: 388 SVDEAALLRAVELAKTDLTTELVKEFTELQGIVGGLYARAQGEGEAVAQAIYWQYSPASM 447 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P + LAD++ T++ +AI +P+GSKDP+ALRRA +++I+ E K+ + Sbjct: 448 DDPIPPTLEGQLLGLADRIGTIVEMFAIGLEPTGSKDPFALRRAANAVVKILAEGKLPVT 507 Query: 525 LSQFIEDQN--------------LILFFHDRLKLYLHD-RDIRHDLIEAILRPENDNLLT 569 L + + ++ F +RL+ Y+ + R+D++ A+L +++ Sbjct: 508 LDRLLNAAEESSKVENAAASREKVMAFLKERLEFYMREVLGYRYDVVNAVLAAGAHDVVD 567 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK----NREISLEISPQYLLLEAEK 625 + + L+ S + KR IL +K +S ++ L AEK Sbjct: 568 TIARAEALSAVRGSEDFAAIAAAFKRSKNILRQAAEKAGVAEDSLSADVDAALLPEPAEK 627 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 +L+ + ++E Y + + ++ +++FFD+V+V V+D +R NRL+L+ Sbjct: 628 QLHEAAAKLAPVVEELRAKNDYRAALEQIATLRPQVDLFFDKVMVMVEDDLLRHNRLALI 687 Query: 686 QYIKNIILIVINVQKIV 702 QY+ + + +IV Sbjct: 688 QYVLRSFSSIADFSEIV 704 >gi|294618701|ref|ZP_06698234.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1679] gi|291595044|gb|EFF26388.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1679] Length = 691 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KYTHGKEAKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++II ++ ++ + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEIIPFEILDVKTDRASRGHRFLGED-VTFTHAKEYEEKLNEQFVIASPQKRKEMIITQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 335 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISEVISKDTDRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 621 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|257890448|ref|ZP_05670101.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257826808|gb|EEV53434.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,410] Length = 694 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 211/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 121 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 122 KYTHGKEAKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++II ++ ++ + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEIIPFEILDVKTDRASRGHRFLGED-VTFTHAKEYEEKLNEQFVIASPQKRKEMIITQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 338 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++R+I K PLS Sbjct: 447 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRVIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 507 ETISEVISKDTDRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 624 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|331001256|ref|ZP_08324882.1| glycine--tRNA ligase, beta subunit [Parasutterella excrementihominis YIT 11859] gi|329568983|gb|EGG50779.1| glycine--tRNA ligase, beta subunit [Parasutterella excrementihominis YIT 11859] Length = 696 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 214/726 (29%), Positives = 361/726 (49%), Gaps = 57/726 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKG 58 M L+EI +EE+P + ++ + L LKE+ + + Y +P R+ + Sbjct: 1 MASLLIEIQTEELPPKALDNLSKAFAKELTFSLKEQDLALPNAQVTAYGSPRRIAALISD 60 Query: 59 LSPHSPEKI-EERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 +S +P+K ++L P G A+ +++ G++ + K D + Sbjct: 61 VSEVAPDKPFRQKLVPVKVGLDAEGKATPALSKKMKALGIECEPSELKVVNDGKQDQLVY 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 K ++D L+ + A++++P PK M + + ++RP+K ++ + Sbjct: 121 EGTKAGVSLKDGLQIALDHAVRRLPIPKVMSYQLENGK--TVEFVRPVKHLVALF----- 173 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 ++I+ ++L + G T GHRFH PI ++ + Y +E+ ++ E R+N ++ Sbjct: 174 DKEIVPVELFGLKAGRETMGHRFHVKEPISIKEAEKYAEQMEKEGKIVASFEERKNKMVG 233 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + A + E++ DL+ E+ L EW V+ FD+++L +P E + LT++ NQK F Sbjct: 234 ELKSAAEKLNAEIIMPDDLVNEVAALTEWPVVYESGFDEEFLTVPAECLILTMQQNQKYF 293 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 R + L N F+LVS I+A DGG AI GN+RVV ARL DA F+ +D+ Sbjct: 294 ALRDKNKKLMNRFLLVSQIEAKDGGEAIRSGNARVVRARLADAKFFYDQDRL-------- 345 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + L+ R+ L VV+H K+GTQ ER R++ + +IA+ I AD AL Sbjct: 346 ------------QTLESRVPGL--AHVVYHNKLGTQLERSERVQKIASRIAEQIGADPAL 391 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L+KADL T +V EFPELQG +G+ YA E+ AI EH +PR + +P+ Sbjct: 392 ARRAAKLAKADLRTLMVGEFPELQGIMGEYYAHHDKEDDKVALAIREHYQPRYAGDELPS 451 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 S+ V+LADK++TL + I + P+G KDP+ALRR LGI+R+++E ++ + L + Sbjct: 452 TPESLAVALADKIETLTGLFGIGQLPTGEKDPFALRRHALGILRMLIEKELPLSLDKLIA 511 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + L FFHDRL++ D+ +E+++ E L + +K Sbjct: 512 IGTEEESVVPGVKDATEELKQFFHDRLRVMQKDQGFTAHEVESVIGSEPAILADVPKRLK 571 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +++F S + E + KRI IL K ++ + P L + EK LY I Sbjct: 572 AVHDFMSLPEAESLAAANKRIENILK---KNTLPLADAVDPALLTEKEEKDLYEAIRTLE 628 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + P++ FFD+V+VN +D +R NRL+LL + + V Sbjct: 629 PKLEADYKAGRYEDELRSLAPLKAPVDAFFDKVMVNAEDEALRRNRLTLLNELHKAMNQV 688 Query: 696 INVQKI 701 + + Sbjct: 689 AKLSCL 694 >gi|62261390|gb|AAX77986.1| unknown protein [synthetic construct] Length = 729 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 205/727 (28%), Positives = 368/727 (50%), Gaps = 65/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 32 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 91 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G + GF +S G++ ++ KGD + Sbjct: 92 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVA--TPKGDKLFYKTVQ 149 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P K MRW + S ++RP+ +L + + + Sbjct: 150 SGQATVNLLQEIITKALKQLPISKMMRWGS-----SNVEFVRPVHWVLALYGND-----V 199 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + + ++ A + Sbjct: 200 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQSKQMLVEQAENI 259 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 260 AKENDYQVVLDNDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 319 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 320 QGDLVANFITISNIQSK-KPELVTSGNQKVMNARLADAAFFYDTD--------------- 363 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 364 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 416 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 417 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAA 476 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 477 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 536 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 537 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 596 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDF 634 +F++S K + + S KR+ IL+ K + + + E E L I + Sbjct: 597 TKFYNSDKAQSLIASNKRVANILS---KNATDKDYYYNIELAKAAANEYELALAYSIEEV 653 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++++ Y +LL + + I FF+ V+V +D ++R NRL+LL + + + Sbjct: 654 AADLHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRKNRLALLVNLHKMFIG 713 Query: 695 VINVQKI 701 + ++ K+ Sbjct: 714 IADISKL 720 >gi|224369902|ref|YP_002604066.1| GlyS [Desulfobacterium autotrophicum HRM2] gi|259511921|sp|C0QJ89|SYGB_DESAH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|223692619|gb|ACN15902.1| GlyS [Desulfobacterium autotrophicum HRM2] Length = 689 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 192/727 (26%), Positives = 324/727 (44%), Gaps = 64/727 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EEIPA A + L + + + TP RL L ++ + Sbjct: 1 MNNLLIEIGAEEIPAGYILPALTSFCDRVTAALTGARINHGKTAVFGTPRRLALMVEDVQ 60 Query: 61 PHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +GP G A F G+ + + I D KG AV+ Sbjct: 61 ACQAPQKTTLMGPPQRIGFDNEGKPTLAGVKFAEKAGI--VPEEIIITDNGKGPYLSAVI 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + L E +L+ ++P IQ +P+PKSM W ++ RP+ S+ +L + Sbjct: 119 EESCLLTEAILEGVLPELIQAIPFPKSMHWGDLD-----VTFARPIVSLTALL-----GK 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ + I + +GH F AP +++S D Y+ L +A V+ D RR + Sbjct: 169 TVLNFKIGNIASASFVFGHSFMAPERFELESADAYLDTLRKAGVVADIGERRTILKESIK 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A ++ED++L++ + LVE+ +G FD+ +L LP+E++ ++ +QK F Sbjct: 229 AAADKACATIIEDEELVDIVNNLVEYPYPVVGHFDEVFLELPDEVLITAMREHQKYFALA 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L CFI V+N +A D + +G+ +V+ ARL DA F+ D Sbjct: 289 DTAGKLMPCFIAVNNTRARDM-DVVAKGHGKVIRARLADAQFFYHVD------------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD- 412 L LD + +L V F A +G+ E+ R+ VL + +A L++AD L Sbjct: 335 -------LESTLDDFVEKLK--AVTFQASLGSMYEKTGRLVVLVEFLAGLVNADQELQKK 385 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL +++V EF +LQG IG+ YA E+ AIEEH +P ++P Sbjct: 386 LMRAARLSKADLVSQMVIEFTKLQGIIGRVYAQKGGEDPEVAMAIEEHYRPVYSGGDLPR 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +++ADK DTL ++ N P+G+ DPYALRR ++GI++I+LE D L + Sbjct: 446 TDTGKILAIADKTDTLCGCFSANLIPTGASDPYALRRQSIGILQIMLEAGFDFSLRALVR 505 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++ F R+ L D+ + + A L N+ I Sbjct: 506 RGVAQYQTDPDKKNEISTQILEFLKGRMTNMLVDQGFSREAVNAALSVSFYNVPDAFLRI 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K L+ E + KR+ IL K + ++ +AEK L+ + Sbjct: 566 KALDILRQEPDFEPLSTAFKRVVNILK---KAGGDAKTRVNVNLFNCDAEKALHQACGEV 622 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + Y + ++ ++ F+ V+V DD +R NR++LL + + Sbjct: 623 TERVDTCIKAGDYGAALKEISTLRPHVDRLFEDVMVMDDDVALRINRMALLSSVAALFRN 682 Query: 695 VINVQKI 701 + + +I Sbjct: 683 IADFSQI 689 >gi|56707878|ref|YP_169774.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110670349|ref|YP_666906.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis FSC198] gi|224456956|ref|ZP_03665429.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|254370371|ref|ZP_04986376.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874693|ref|ZP_05247403.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|56604370|emb|CAG45397.1| Glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110320682|emb|CAL08780.1| Glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis FSC198] gi|151568614|gb|EDN34268.1| hypothetical protein FTBG_00131 [Francisella tularensis subsp. tularensis FSC033] gi|254840692|gb|EET19128.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|282159061|gb|ADA78452.1| Glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis NE061598] Length = 694 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 205/727 (28%), Positives = 368/727 (50%), Gaps = 65/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVA--TPKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P K MRW + S ++RP+ +L + + + Sbjct: 124 SGQATVNLLQEIITKALKQLPISKMMRWGS-----SNVEFVRPVHWVLALYGND-----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + + ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQSKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDNDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSK-KPELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDF 634 +F++S K + + S KR+ IL+ K + + + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILS---KNATDKDYYYNIELAKAAANEYELALAYSIEEV 627 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++++ Y +LL + + I FF+ V+V +D ++R NRL+LL + + + Sbjct: 628 AADLHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRKNRLALLVNLHKMFIG 687 Query: 695 VINVQKI 701 + ++ K+ Sbjct: 688 IADISKL 694 >gi|294623001|ref|ZP_06701890.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium U0317] gi|291597557|gb|EFF28719.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium U0317] Length = 691 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KYTHGKEAKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++II ++ ++ + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEIIPFEILDVKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 335 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISEVISKDTDRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 621 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|307610542|emb|CBX00128.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila 130b] Length = 688 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 198/722 (27%), Positives = 359/722 (49%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ D K KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSEGNPTPALLGFAKSCGVTV--DALTKIQTDKGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V ++++ +P K MRW + RP+ + + +E K Sbjct: 122 EGTKTKDLLPGLVSLSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHK- 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 176 ----ILGVTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AARLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L + FI VSNI +S+ ++ GN +V+ ARL DA F+K+D+ Sbjct: 292 YGELLHYFITVSNIASSNPKQVVL-GNEKVMRARLSDAAFFFKQDK-------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + V+F K+G+ ++V RI+ + ++Q ++ L +RA Sbjct: 337 ------KQPLSAHIP--STEQVIFQVKLGSMYDKVQRIKAMMNHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E + A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAAVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SLAD++DTL+ +AI +KP+G KDP+ LRR L ++R+++ + LS I++ Sbjct: 449 ALSLADRIDTLVGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ I Q + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKVD--IKEQLIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ EP++ FFD V+V V++ ++ NRL+LLQ ++ ++ V ++ Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNRLALLQRLQELLQGVADIS 686 Query: 700 KI 701 + Sbjct: 687 ML 688 >gi|293559431|ref|ZP_06675970.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1162] gi|314948954|ref|ZP_07852320.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0082] gi|291606645|gb|EFF36040.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1162] gi|313644613|gb|EFS09193.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0082] Length = 691 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 211/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KYTHGKEAKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 335 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 621 AVEAMKKSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|319790592|ref|YP_004152225.1| glycyl-tRNA synthetase, beta subunit [Thermovibrio ammonificans HB-1] gi|317115094|gb|ADU97584.1| glycyl-tRNA synthetase, beta subunit [Thermovibrio ammonificans HB-1] Length = 689 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 210/725 (28%), Positives = 351/725 (48%), Gaps = 68/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI EE+PA E L L L+ + ++ + TP RL + Sbjct: 5 NLLLEIGCEELPAHFVTSGIEFLKEKLPQELESNFLPPSSVEVFGTPRRLIAVAYDVPEV 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKK-GDVYLAVLR 114 P++ E +GP + G +A +GF RS G+ ++ P K G Sbjct: 65 QPDREELLVGPSLKAAFDTEGRPTRAAEGFARSKGVSVEELITVENPPGKRGTYVAVKRV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +VL+ ++P I +P+ KSMRW T + RP++ I + E Sbjct: 125 VKGRSAVEVLRELLPKLILSIPFKKSMRWGTKR-----IRFGRPIRWIAAVYGGEP---- 175 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ I NI+YGHRF +P P V+ ++ LEE V+ D E R IL+ A Sbjct: 176 -VEFEIDGIVSSNISYGHRFLSPEPFVVEEPAEHLEKLEERFVVADQEKRCAQILDGAVS 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA VG L++D++LLEE+ LVE+ +GSF++++L LP+E+ + +K +QK F Sbjct: 235 LARRVGGHLLKDEELLEEVTNLVEFPYPILGSFEEEFLKLPKEVPVVVMKDHQKFFAVTD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N F+ V+NI+ D + + +G +V+ ARL+DAL F+ D+ Sbjct: 295 EAGNLKNYFVGVANIKPVD-DSTVCRGYEKVLRARLKDALFFFNEDR------------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-DVALVDR 413 K L++R+ +L+ ++FH K+GT ++ R+ L +A + R Sbjct: 341 -------KKRLEERVPKLE--GIIFHEKLGTMLQKTKRLEGLAPWVAGVTGLGSEGESRR 391 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL TE+V EFPELQG +GK YA+L E + AIEEH PR ++V Sbjct: 392 AAHLCKADLLTEMVNEFPELQGTMGKYYALLDGEPEAVAVAIEEHYLPRFSGDSVAKTAA 451 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----- 528 + +S+A+K+D L F + KP+GS DP+ALRR LG+I+ ++EN++ + + + Sbjct: 452 GVALSVAEKVDNLTGFIGVGLKPTGSADPFALRRNALGLIQTLIENELFLDILEAAREAA 511 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + F +RLK +L ++ R D +EA+L + K Sbjct: 512 RLYGEQGIELIREAPEETAEFVKERLKNFLKEKGFRPDTLEAVLAV-THDPYDAFLRAKA 570 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + + + + E L++ +R+ I+ + E E+ L+ + + Sbjct: 571 VEKLRENPEFEATLITMRRVVNIIPEGFEATDFTP--------QGEFEENLFNAFKELQS 622 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + + Y + + S+ ++ FFD V+V D +VR+ RLSLL+ I + +L +I Sbjct: 623 KLNKLISERNYTEALLQVSSLKPAVDAFFDNVMVMDRDPQVRNRRLSLLKTIADQLLKLI 682 Query: 697 NVQKI 701 + K+ Sbjct: 683 DFSKL 687 >gi|257893054|ref|ZP_05672707.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260559557|ref|ZP_05831737.1| glycyl-tRNA synthetase [Enterococcus faecium C68] gi|257829433|gb|EEV56040.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260074225|gb|EEW62547.1| glycyl-tRNA synthetase [Enterococcus faecium C68] Length = 694 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 211/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 121 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 122 KYTHGKEAKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 338 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGELP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 507 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 624 AVEAMKKSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|303256200|ref|ZP_07342216.1| glycyl-tRNA synthetase, beta subunit [Burkholderiales bacterium 1_1_47] gi|302860929|gb|EFL84004.1| glycyl-tRNA synthetase, beta subunit [Burkholderiales bacterium 1_1_47] Length = 696 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 214/726 (29%), Positives = 361/726 (49%), Gaps = 57/726 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKG 58 M L+EI +EE+P + ++ + L LKE+ + + Y +P R+ + Sbjct: 1 MASLLIEIQTEELPPKALDNLSKAFAKELAFSLKEQDLALPNAQVTAYGSPRRIAALISD 60 Query: 59 LSPHSPEKI-EERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 +S +P+K ++L P G A+ +++ G++ + K D + Sbjct: 61 VSEVAPDKPFRQKLVPVKVGLDAEGKATPALSKKMKALGIECEPSELKVVNDGKQDQLVY 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 K ++D L+ + A++++P PK M + + ++RP+K ++ + Sbjct: 121 EGTKAGVSLKDGLQIALDHAVRRLPIPKVMSYQLENGK--TVEFVRPVKHLVALF----- 173 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 ++I+ ++L + G T GHRFH PI ++ + Y +E+ ++ E R+N ++ Sbjct: 174 DKEIVPVELFGLKAGRETMGHRFHVKEPISIKEAEKYAEQMEKEGKIVASFEERKNKMVG 233 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + A + E++ DL+ E+ L EW V+ FD+++L +P E + LT++ NQK F Sbjct: 234 ELKSAAEKLNAEIIMPDDLVNEVAALTEWPVVYESGFDEEFLTVPAECLILTMQQNQKYF 293 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 R + L N F+LVS I+A DGG AI GN+RVV ARL DA F+ +D+ Sbjct: 294 ALRDKNKKLMNRFLLVSQIEAKDGGEAIRSGNARVVRARLADAKFFYDQDRL-------- 345 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + L+ R+ L VV+H K+GTQ ER R++ + +IA+ I AD AL Sbjct: 346 ------------QTLESRVPGL--AHVVYHNKLGTQLERSERVQKIASRIAEQIGADPAL 391 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L+KADL T +V EFPELQG +G+ YA E+ AI EH +PR + +P+ Sbjct: 392 ARRAAKLAKADLRTLMVGEFPELQGIMGEYYAHHDKEDDKVALAIREHYQPRYAGDELPS 451 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 S+ V+LADK++TL + I + P+G KDP+ALRR LGI+R+++E ++ + L + Sbjct: 452 TPESLAVALADKIETLTGLFGIGQLPTGEKDPFALRRHALGILRMLIEKELPLSLDKLIA 511 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + L FFHDRL++ D+ +E+++ E L + +K Sbjct: 512 IGTEEESVVPGVKDATEELKQFFHDRLRVMQKDQGFTAHEVESVIGSEPAILADVPKRLK 571 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +++F S + E + KRI IL K ++ + P L + EK LY I Sbjct: 572 AVHDFMSLPEAESLAAANKRIENILK---KNTLPLADAVDPALLTEKEEKDLYEAIRTLE 628 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + P++ FFD+V+VN +D +R NRL+LL + + V Sbjct: 629 PKLEADYKAGRYEDELRSLAPLKAPVDAFFDKVMVNAEDEALRRNRLTLLNELHKAMNQV 688 Query: 696 INVQKI 701 + + Sbjct: 689 AKLSCL 694 >gi|71083322|ref|YP_266041.1| glycyl-tRNA synthetase subunit beta [Candidatus Pelagibacter ubique HTCC1062] gi|91762248|ref|ZP_01264213.1| glycyl-tRNA synthetase beta subunit [Candidatus Pelagibacter ubique HTCC1002] gi|71062435|gb|AAZ21438.1| Glycyl-tRNA synthetase beta subunit [Candidatus Pelagibacter ubique HTCC1062] gi|91718050|gb|EAS84700.1| glycyl-tRNA synthetase beta subunit [Candidatus Pelagibacter ubique HTCC1002] Length = 689 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 213/721 (29%), Positives = 359/721 (49%), Gaps = 56/721 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DF +E++SEEIPA +Q + L L +E+ ++++ + TP+RL + +GLS Sbjct: 1 MSDFFIELFSEEIPAGLQSNSRNVLLENFQNLFEEKKILFKKSSSFSTPNRLIILFEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +K EE GP V A +KAI+GFLRS ++ KK +KG+ Y K Sbjct: 61 KEIIQKAEEIKGPNVKAPEKAIEGFLRSNQIEKKDLL--KKTLEKGEFYFFKKASSKINT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D+L+ P+ + K+ W KSM W + SW RPLKSIL + +K ++ Sbjct: 119 IDLLQEYTPIILDKLQWKKSMTWGNYN-----LSWARPLKSILAVF-----DDKSLNFKF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + N T+ + ++ Y ++ +++D R+ I+ + +++ Sbjct: 169 HHLIASNSTFIDKEFEDKKKIFKNFKSYKDFFSQSGIIIDHVLRKEFIVKEIEKISRKNN 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 + + LL+E+ +VE + + FD+K+L +P+E++ +T++ +QK F T ++G + Sbjct: 229 FIVEPNNKLLDEVTDIVEQPNILVCKFDQKFLNIPKEILIITMQYHQKYFPTFDKKGKIT 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F++V+N +D I GN RVV ARL DA FW++++ Sbjct: 289 NEFLVVANN--NDEKGYIKMGNERVVEARLSDAQFFWEKNK------------------- 327 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 S+ L +++++L ++ + +G+ +++ R+R LG I+ + V+ + + K Sbjct: 328 -SQNLVKQVSKLK--NMNYFKGLGSYFDKIQRMRKLGGIISDELLISKDQVELSASICKV 384 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL ++IV EFPELQG +G +A +Q + AI EH +P G P SI ++L Sbjct: 385 DLVSDIVGEFPELQGIMGGHFAEVQGFDKEIALAISEHYQPVGLDSKTPKKPFSIALALT 444 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DK+DTL+ F+ IN+KP+ SKDPYALRR+ LG+I+++++N + + I Sbjct: 445 DKIDTLVGFFGINQKPTSSKDPYALRRSALGVIKLLIDNNKEFKIKDLISYSTSLHKDQG 504 Query: 532 ---------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTIVDLIKHLNEFF 581 + L F DRLK Y+ ++ IR ++IEA + D++ I LN Sbjct: 505 FIFSNDSSQKELSDFLMDRLKYYMKEKKIRSEIIEASIKAHGLDHMNKIYKKASTLNGLI 564 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKK-NREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S GE + S KR + IL E K + E+S P + EK L+ I++ + Sbjct: 565 SKVIGEDIITSYKRAYSILESELKNTDLELSNTTDPGIFKNDYEKNLFKKINEIRKYFTN 624 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + Y + ++L + FFD V VN DD+ ++ NRL LLQ + IN Sbjct: 625 IGKDENYRETLEILAGAKKATSEFFDNVKVNDDDKNIKKNRLELLQMLCRTFDNYINFSN 684 Query: 701 I 701 I Sbjct: 685 I 685 >gi|294616321|ref|ZP_06696114.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1636] gi|291590835|gb|EFF22551.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1636] Length = 691 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KYTHGKEAKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ +I + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEVIPFEILDIKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 335 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 ETTVGSILAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR+NRL+ L I Sbjct: 621 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRENRLTQLNQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|69247288|ref|ZP_00604289.1| Glycyl-tRNA synthetase, beta subunit [Enterococcus faecium DO] gi|258616600|ref|ZP_05714370.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium DO] gi|68194910|gb|EAN09380.1| Glycyl-tRNA synthetase, beta subunit [Enterococcus faecium DO] Length = 691 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KYTHGKEAKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ +I + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEVIPFEILDIKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPYFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 335 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 ETTVGSILAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR+NRL+ L I Sbjct: 621 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRENRLTQLNQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|293378310|ref|ZP_06624479.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium PC4.1] gi|292643174|gb|EFF61315.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium PC4.1] Length = 691 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 210/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KYTHGKESKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 335 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 384 DLQRAAKIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 504 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ +AEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAQLEKQSEVDPKLFENDAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 621 AVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|227551965|ref|ZP_03982014.1| glycine--tRNA ligase [Enterococcus faecium TX1330] gi|227178870|gb|EEI59842.1| glycine--tRNA ligase [Enterococcus faecium TX1330] Length = 691 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 210/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KYTHGKESKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 335 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 504 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ +AEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAQLEKQSEVDPKLFENDAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 621 AVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|187922692|ref|YP_001894334.1| glycyl-tRNA synthetase subunit beta [Burkholderia phytofirmans PsJN] gi|187713886|gb|ACD15110.1| glycyl-tRNA synthetase, beta subunit [Burkholderia phytofirmans PsJN] Length = 699 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 210/714 (29%), Positives = 340/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + +K + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELSFERYATPRRLAVTIKNVRAVAPEKHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P + G + L + G S +++ K + + P + D Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFSVNDLERAQDGKAEAFFLRYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L++ + + K+P PK M + + ++RP + + E+++ + I Sbjct: 139 LQSALDETLAKLPIPKVMTYQRPDG--TNVQFVRPAHRLTAL-----HGEQVVPVSALGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 + T GHRF + +++Q D Y L + V+ + R+ I LA A G + Sbjct: 192 DADDTTLGHRFLSEGFVQIQHADTYAETLLHKGHVVANFADRKETIRTHL--LAQADGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYACRFGDEFLQVPQECLILTMQTNQKYFALTDANGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ S G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETSTPGD-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ +RV R+ L IA+LI ADVAL RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSALQRVERVEALAGAIAELIGADVALAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT V+LADK Sbjct: 407 ITDMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPTTATGTVVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+TL+ W I +P+G KDP+ALRR LG++RI++E ++ + L + Sbjct: 467 LETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLPVDLVELLRTAHAQFAAVPNV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 Q + F DRL+ L +R I+A+L L IV + + EF + + Sbjct: 527 TDSTQAIYEFSMDRLRGLLRERGYAPGEIDAVLALNPTRLDDIVARLDAVREFAALPEAA 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + L AEK LYA + +Q + + Y Sbjct: 587 SLAAANKRISNILK---KSEGAATGGVQVALLTEAAEKALYAQLEQVAPRVQSQLAARDY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 644 TGALTALAALREPVDTFFNDVMVNAEDPALRANRLALLGALHQQMNCVADISRL 697 >gi|257895443|ref|ZP_05675096.1| glycyl-tRNA synthetase [Enterococcus faecium Com12] gi|257832008|gb|EEV58429.1| glycyl-tRNA synthetase [Enterococcus faecium Com12] Length = 694 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 210/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 121 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 122 KYTHGKESKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 338 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGELP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 507 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ +AEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAQLEKQSEVDPKLFENDAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 624 AVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|51245338|ref|YP_065222.1| glycyl-tRNA synthetase, beta subunit [Desulfotalea psychrophila LSv54] gi|50876375|emb|CAG36215.1| probable glycyl-tRNA synthetase, beta subunit [Desulfotalea psychrophila LSv54] Length = 689 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 202/727 (27%), Positives = 330/727 (45%), Gaps = 68/727 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EE+PA Q + + L I E + + + +P RL + +K L+ Sbjct: 1 MRDLLFEIGTEELPAGFQRPSLQQLKEKFIQKAAELKIEHGAVVTLGSPRRLTIIVKDLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +EE LGP G KA GF RS G ++ KG+ + V Sbjct: 61 LKQDDILEELLGPSKKAAFDGDGNPTKAAQGFARSKGASVEDLQVVE--TAKGEYLMLVR 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +L ++ I ++ + KSMRW + + + RP++ +L + E Sbjct: 119 ELKGQETVALLPKLLEELIGELSFAKSMRWGSYTTT-----FARPIQWLLALF-----GE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ L +I + + GHRF A V+ Y L E V++DP RR ++ + H Sbjct: 169 DVVALKHGDIVSAHTSRGHRFMANVDFVVKDAASYEELLLEHNVIVDPAKRRAKVVEEIH 228 Query: 234 RLASA---VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 R + V L D++L++ + LVE+ G F K +L LP+E++ +++ NQK F Sbjct: 229 RALAESTLVEGTLAVDEELVDTVTNLVEYPYGVCGVFAKSFLDLPDEVLTTSMRVNQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L N F+ V+N + D +G+ RV+ ARL+DA+ F+ D+ Sbjct: 289 TIVDDAGALVNGFVAVNNTKVIDS-EVTRKGHQRVLRARLDDAIFFFAGDK--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VA 409 L+ R+A L +VF K+GT E+ RI L + +A++ID VA Sbjct: 339 -----------KTSLESRVASL--AGIVFQTKLGTMAEKTERIVKLTRSLAEVIDHSLVA 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L KADL T++V EF LQG +G YA E AI+EH P+ +P Sbjct: 386 DACRAATLCKADLITDMVGEFTSLQGVMGAAYATNDGEKEGVALAIKEHYMPKRAGAELP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + V LAD+LDT+ + I + P+G+ DP+ LRR TL ++ II E I L + Sbjct: 446 DTDLGALVGLADRLDTIAGCFGIGQIPTGTADPFGLRRLTLAVLHIISERGYTISLHEMV 505 Query: 529 ---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +I F RL R +EA+L D+L I Sbjct: 506 GKALALYGDKVNGGNETVEKIIDFMRGRLANDCVSRGQNAGAVEAVLSLGFDDLGDIHAR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ L E S KRI I+ ++E+ +AE+ L+++ Sbjct: 566 IQALMEVRKEDSFAVLAASFKRIRNIIKN------NTAVEVQTDLFEEDAERNLFSLFQL 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q+ + K Y ++ + EP++ FF+ V+V ++ VR NRL+LL + ++++ Sbjct: 620 VAAEMQDLVAKKEYLAALMVMLKMKEPVDAFFESVMVMAENDAVRQNRLNLLTALADLVM 679 Query: 694 IVINVQK 700 + ++ K Sbjct: 680 QIGDISK 686 >gi|257898049|ref|ZP_05677702.1| glycyl-tRNA synthetase [Enterococcus faecium Com15] gi|257835961|gb|EEV61035.1| glycyl-tRNA synthetase [Enterococcus faecium Com15] Length = 694 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 210/733 (28%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 121 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 122 KYTHGKEAKEVLTG-LAGVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 338 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGELP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 507 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E++P+ +AEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAQLEKQSEVNPELFENDAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 624 AVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|314939537|ref|ZP_07846765.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a04] gi|314942708|ref|ZP_07849534.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133C] gi|314953301|ref|ZP_07856229.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133A] gi|314993381|ref|ZP_07858746.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133B] gi|314995731|ref|ZP_07860820.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a01] gi|313590003|gb|EFR68848.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a01] gi|313592046|gb|EFR70891.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133B] gi|313594644|gb|EFR73489.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133A] gi|313598573|gb|EFR77418.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133C] gi|313641173|gb|EFS05753.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a04] Length = 691 Score = 565 bits (1456), Expect = e-158, Method: Composition-based stats. Identities = 214/733 (29%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KYTHGKEAKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++II ++ +I + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEIIPFEILDIKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + + ++ Sbjct: 335 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVRLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK LY Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELYK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 621 AVEGMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLNQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|54294727|ref|YP_127142.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila str. Lens] gi|53754559|emb|CAH16043.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila str. Lens] Length = 688 Score = 565 bits (1456), Expect = e-158, Method: Composition-based stats. Identities = 198/722 (27%), Positives = 357/722 (49%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ D K KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSEGNPTPALLGFAKSCGVTV--DALTKIQTDKGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V ++++ +P K MRW + RP+ + + +E K Sbjct: 122 EGTKTKDLLPGLVSLSLESLPITKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHK- 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 176 ----ILGVTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AAPLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L + FI VSNI +S+ ++ GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLHYFITVSNIASSNPKQVVL-GNEKVMRARLSDAAFFFKQDK-------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + V+F K+G+ ++V RI+ + ++Q ++ L +RA Sbjct: 337 ------KQPLSAHIP--STEQVIFQVKLGSMYDKVQRIKAMMDHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAIVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SLAD++DTL +AI +KP+G KDP+ LRR L ++R+++ + LS I++ Sbjct: 449 ALSLADRIDTLAGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA N+++ I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYANKKVD--IKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ EP++ FFD V+V V++ ++ NRL+LLQ ++ ++ V ++ Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNRLALLQRLQELLQGVADIS 686 Query: 700 KI 701 + Sbjct: 687 ML 688 >gi|164686272|ref|ZP_02210302.1| hypothetical protein CLOBAR_02710 [Clostridium bartlettii DSM 16795] gi|164601874|gb|EDQ95339.1| hypothetical protein CLOBAR_02710 [Clostridium bartlettii DSM 16795] Length = 688 Score = 565 bits (1456), Expect = e-158, Method: Composition-based stats. Identities = 228/724 (31%), Positives = 361/724 (49%), Gaps = 67/724 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ EE+P+R + L LKE V ++++ +Y TP RL + +S Sbjct: 5 FLLEVGVEELPSRFVESTLTQIKENLEKSLKENRVEFKDIEKYGTPRRLTFVINQISDKQ 64 Query: 64 PEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + EE GP G K GF++S GL K K + L++ Sbjct: 65 SDLEEELKGPSKKISVDADGNFTKPALGFMKSKGLDEAD--VYFKQVGKDEYLFGTLKQE 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +VLK IVP AI+ V +PK+MRW + RP++ ++ +L ++++ Sbjct: 123 GKATSEVLKEIVPAAIKGVTFPKAMRWG-----GKNMKFARPIRWMVALL-----NDEVL 172 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 ++L+ I N+T GHRF I+V S++ Y + L + V+LD R+ AI + A +A Sbjct: 173 PINLEGIVASNVTKGHRFLGRKEIEVFSIEDYFKQLSKNFVVLDQNVRKEAIKSQAEEVA 232 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++G E+ + DLLEEI LVE+ F G F+K Y+ LP+E++ +K +Q+ F ++ Sbjct: 233 KSLGGEVEIEDDLLEEITYLVEYPTAFYGEFNKDYVKLPKEVVTTPMKEHQRYFPV-SKY 291 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V N + GN +V+ ARL DAL F+ D Sbjct: 292 GKLLPYFIAVRNGD-KHAIDIVKAGNEKVLEARLADALFFYDED---------------- 334 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD--RA 414 + KPL+ + L VVF AK+GT ++ RI L + I + +D L D RA Sbjct: 335 ----IKKPLESFVENLKT--VVFQAKLGTVYDKTLRIEKLAQDIVETLDEKEILNDTLRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL T +V EF ELQG +G+EYA + EN + AI EH PR + +P + Sbjct: 389 AKLCKADLVTNMVFEFTELQGVMGREYAKVGGENDAVAQAIFEHYLPRFAGDILPQTQEG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 + +S+ADKLD++ F+AI KPSGS+DPYALRR LGI+ I+L+ K+DI L + Sbjct: 449 VALSIADKLDSIAGFFAIGIKPSGSQDPYALRRQALGILSILLDKKLDINLEKLVGDALN 508 Query: 529 ----------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++ FF +R+K D IR+D+I+A+L +++ I LN Sbjct: 509 NYDYLTFDKAEVTSQIMDFFIERIKNLFKDLGIRYDVIDAVLSSNLNSISDIHTRAVELN 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 ++ + + L + R+ + E + + L +AE +L A + + Sbjct: 569 KWLQKEELVEMLTAFNRVSTLAEKAE------TDIVDEALLKEDAEVKLNAGFKEIKAQV 622 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + +K Y++ D SI ++ FD V++ D V+ NRL LL+ I + +L + ++ Sbjct: 623 EGFLANKEYNKALDAFASIKPLVDNLFDNVMIMDKDEAVKANRLGLLKQIYDTMLTICDL 682 Query: 699 QKIV 702 KIV Sbjct: 683 SKIV 686 >gi|289566740|ref|ZP_06447154.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecium D344SRF] gi|289161461|gb|EFD09347.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecium D344SRF] Length = 691 Score = 565 bits (1456), Expect = e-158, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KYTHGKEAKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ +I + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEVIPFEILDIKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPYFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 335 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 ETTVGSILAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 621 AVEVMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|257879933|ref|ZP_05659586.1| glycyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257814161|gb|EEV42919.1| glycyl-tRNA synthetase [Enterococcus faecium 1,230,933] Length = 694 Score = 565 bits (1455), Expect = e-158, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 121 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 122 KYTHGKEAKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ +I + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDIKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKDHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 338 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 507 ETISEVISKDTDRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 624 AVEVMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|157693025|ref|YP_001487487.1| glycyl-tRNA synthetase subunit beta [Bacillus pumilus SAFR-032] gi|157681783|gb|ABV62927.1| glycine--tRNA ligase beta subunit [Bacillus pumilus SAFR-032] Length = 681 Score = 565 bits (1455), Expect = e-158, Method: Composition-based stats. Identities = 210/718 (29%), Positives = 353/718 (49%), Gaps = 61/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR ++ + L + K + + ++++ + +P RL + + G++ Sbjct: 5 DVLLEIGLEEMPARFMSESTKQLGEKVKAWFKTQNISFEDVTLFNSPRRLAVLVTGVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF R G T K+ K D + Sbjct: 65 QEDIKEEAKGPAKKIAQDAEGNWTKAAEGFARGQGASTDD--LYFKEIKGVDYVHVQKFE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++D+L + + +PK+MRW + +IRP+K I+C+ E+I Sbjct: 123 EGKQVKDLLPA-LGEIATSLSFPKNMRWGSKD-----LRYIRPIKWIVCLF-----GEEI 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + +D+ + G T GHRF I + S Y + L + V+ D + R+ AI + L Sbjct: 172 VPVDIAGVKSGRETRGHRFLGKAAI-IDSPASYEQTLRDQFVIADSDKRKQAITEQLNAL 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS G + D +LLEE+ LVE+ V GSF++++L LPEE++ T+K +Q+ F + Sbjct: 231 ASEKGWVIPVDPELLEEVNNLVEYPTVLSGSFEEEFLALPEEVLVTTMKEHQRYFPVKNE 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N S+ + +GN +V+ ARL DA F+K D+ + Sbjct: 291 QGELLPHFITVRNG-NSEALENVARGNEKVLRARLSDAAFFYKEDEKLV----------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR-- 413 ++ + +LD VVFH K+GT G+++ R+ + ++A + AD +R Sbjct: 339 ---------IEDNIKKLD--KVVFHEKLGTIGDKLKRVTNIATRLAAHVGADEETTERVA 387 Query: 414 -AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A +SK DL T++V EFPELQG +G++YA E+ +I EH PR + P+ Sbjct: 388 RAASISKFDLVTQMVYEFPELQGIMGEKYAKALGEHEEVAKSINEHYMPRFAGDEAPSTL 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF---- 528 I V++ADKLD++ +F++I+ P+GS+DPY LRR GI++I+L+ +I + Sbjct: 448 IGAIVAIADKLDSICSFFSIDVIPTGSQDPYGLRRQASGIVQILLDRHWNISFKELLALA 507 Query: 529 ----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + LI F RLK L IRHD+++A+L E+ +V L E Sbjct: 508 QVEEAHETALIEFLTHRLKYVLQAEHIRHDVVDAVLDVEDIEPYAVVKKAAVLEESVKQE 567 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 ++ + R+ I E EI P+ E E++LY T ++E + Sbjct: 568 SFKETAEALGRVISISKKGE------DAEIQPELFENEHEQKLYEAYQQVETAVKEHVAA 621 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +Y + L ++ PI +FD +V+ DD +++ NRL+ + + +I N+ ++ Sbjct: 622 GQYSAALEALDTLKTPIVHYFDHTMVHADDEKLKRNRLAQMVKLAKVIQSFANMNNLI 679 >gi|225848493|ref|YP_002728656.1| glycyl-tRNA synthetase subunit beta [Sulfurihydrogenibium azorense Az-Fu1] gi|225643863|gb|ACN98913.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium azorense Az-Fu1] Length = 677 Score = 565 bits (1455), Expect = e-158, Method: Composition-based stats. Identities = 205/717 (28%), Positives = 355/717 (49%), Gaps = 57/717 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKE--EGVIYQNMRQYWTPHRLFLYLKG 58 M +LLEI EE+P ++ + L + KE E N++ + TP RL + +K Sbjct: 1 MKTYLLEIGCEELPPKVILTYKDFLKQYVEESFKEFFEYDSPDNIKVFATPRRLAVLIKN 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P K + LGP G KA F + + + +I+ + KG+ A Sbjct: 61 LREKQPPKQQVILGPPYKVAVDQEGKFTKAALSFAQKNNIPLENLQKIQNE--KGEYLGA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V+ + + ++ + ++P + P KSM W+ S + + RP++ ++ +L Sbjct: 119 VILQEGKDLKHHIMEVIPTLFKSFPQLKSMVWND-----SGYRFPRPIRWVVSLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-----HPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 +++I + + T+ HRF ++ + Y + ++ + E R+N Sbjct: 169 DDEVIPFSVAGVNADRYTHLHRFMTAPVGRGEKKQINHSNEYEEITKLGFIIANFEDRKN 228 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 AI A ++ +++ED+DLL+EI L E+ +G F +YL LP+E+I K + Sbjct: 229 AIKTQYEGFARSLDAQIIEDQDLLDEITCLTEFPVGIVGDFSPEYLILPDEVIITVCK-H 287 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 + ++ ++G L F+ SN+ D I G +V+ ARLEDAL F+K D Sbjct: 288 HQRYLNFKKDGKLIPKFLAFSNVAVKDR-DVIKNGYEKVLKARLEDALFFYKED------ 340 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID- 405 L + L+ + +L + FH K+G+ ++V R L K IA+ I Sbjct: 341 --------------LKQKLEDNVEKLK--GIQFHEKLGSLYDKVIRNLDLAKIIAKEIGY 384 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 D ++RA++LSKADL T +V+EF ELQG +G YA+ Q E+ AI EH P+ Sbjct: 385 TDETKIERAVLLSKADLLTNMVKEFDELQGIMGMYYALKQGEDREVAKAIYEHYLPKTAD 444 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +++P + ++LADK+DT+++F++I E P S DP+A+RR +GI+R+++E +IDI L Sbjct: 445 DDLPQTTLGTILALADKIDTVVSFFSIGEIPKASADPFAVRRNAIGIVRLLVEKEIDIDL 504 Query: 526 SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 S+ I+D+ ++ F RL+ YL + R D+I A+L ++ NL +K L + + Sbjct: 505 SKIIKDEKVLDFLLGRLESYLQSKGYRTDIINAVLSLKDANLYRNYLKVKALTKIINLPD 564 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E + KR+ I+ + + L EK+LY +S + ++ K Sbjct: 565 YESVIQVFKRVGNIIP------EGFTGCVDQTLLENPYEKQLYDKVSVVKDEYLKLIESK 618 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L + I+ FFD V++ V+D +++ NRLSLL+ I ++ + + KIV Sbjct: 619 DYEGALGKLIELKPYIDKFFDNVMIMVEDEKIKQNRLSLLKQINDLFRYLGDFTKIV 675 >gi|261208621|ref|ZP_05923058.1| glycyl-tRNA synthetase [Enterococcus faecium TC 6] gi|260077123|gb|EEW64843.1| glycyl-tRNA synthetase [Enterococcus faecium TC 6] Length = 694 Score = 565 bits (1455), Expect = e-158, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 121 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 122 KYTHGKEAKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ +I + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDIKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPYFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 338 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 ETTVGSILAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 507 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 624 AVEVMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|257886869|ref|ZP_05666522.1| glycyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257822923|gb|EEV49855.1| glycyl-tRNA synthetase [Enterococcus faecium 1,141,733] Length = 694 Score = 565 bits (1455), Expect = e-158, Method: Composition-based stats. Identities = 210/733 (28%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 64 PERQADSEEEVKGPAKKIALDVDGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 121 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 122 KYTHGKESKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDVKTGRASRGHRFLGED-VTIAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 338 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKTAVATAIREHYMPISSEGELP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 507 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ +AEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAQLEKQSEVDPELFENDAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 624 AVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|293568651|ref|ZP_06679966.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1071] gi|293571625|ref|ZP_06682646.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E980] gi|291588611|gb|EFF20444.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1071] gi|291608295|gb|EFF37596.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E980] Length = 691 Score = 565 bits (1455), Expect = e-158, Method: Composition-based stats. Identities = 210/733 (28%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KYTHGKESKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + + Y L E V+ P+ R+ I+ A Sbjct: 168 DEVIPFEILDVKTGRASRGHRFLGED-VTIAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 335 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKTAVATAIREHYMPISSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 504 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ +AEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAQLEKQSEVDPELFENDAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 621 AVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|91774999|ref|YP_544755.1| glycine--tRNA ligase [Methylobacillus flagellatus KT] gi|122985601|sp|Q1H3M3|SYGB_METFK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|91708986|gb|ABE48914.1| glycyl-tRNA synthetase beta chain [Methylobacillus flagellatus KT] Length = 708 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 209/738 (28%), Positives = 359/738 (48%), Gaps = 69/738 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV----------IYQNMRQYWTPH 50 M + L+E++ EE+P + + + L + + + + +P Sbjct: 1 MSNLLVELFVEELPPKALQNIGISFADQIYHSLVTQDLIEPPSELDAANPSPWKWFASPR 60 Query: 51 RLFLYLKGLSPHSPEKIE-ERLGPR------VGAGKKAIDGFLRSTGLQTISDCQIKKD- 102 R+ ++++ ++ +P+K ++L P G A+ L + G + Q+K++ Sbjct: 61 RIAVWIRNVTQKAPDKQLAQKLMPASVGLDADGNATPALLKKLAALGADESAVSQLKREH 120 Query: 103 PKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSI 162 K +V L + + L+ + AI K+P PK M + S +++RP + Sbjct: 121 DGKAEVLLLDRTVRGATLAEGLQKALDEAIAKLPIPKVMTYQLEDG-WSNVNFVRPAHGL 179 Query: 163 LCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAM-VLLD 220 + + +++ + + GN T GHRF A PI +++ D Y L++ V+ Sbjct: 180 VAL-----HGNEVVPIRALGLTAGNRTQGHRFEATQSPIVLRNADSYAEQLQQDGAVIPG 234 Query: 221 PECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIR 280 + RR+ I A + L +ED+ LLEE+ LVE V +G F++ +L +P+E + Sbjct: 235 FKERRDEIARQLEAAAGKLKLRPIEDEALLEEVTALVERPNVLVGQFEQAFLAVPQECLI 294 Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 LT+K NQK F +G L N F++VSNI +D +A+V GN RVV RL DA F+++D Sbjct: 295 LTMKANQKYFPLLDAQGRLTNKFLIVSNISPAD-PSAVVGGNERVVRPRLADAKFFFEQD 353 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + K L+ R+ L VV+H K+G+QGER++R+ + + Sbjct: 354 R--------------------KKTLESRIPGLS--KVVYHNKLGSQGERIARVSEIANLV 391 Query: 401 AQLID--ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 + A +A L+KADL T++V EFPELQG +G+ YA + + AIE+H Sbjct: 392 GTALGDQTLAAQASQAAQLAKADLVTDMVGEFPELQGIMGRYYAQHEGLSDDIAYAIEDH 451 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P NK+ + V+LADKL+TL ++I EKP+G KDP+ALRR +GI+RI+ E Sbjct: 452 YRPRFSGDALPRNKVGMIVALADKLETLAGLFSIGEKPTGEKDPFALRRHAIGILRILTE 511 Query: 519 NKIDIPLSQFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + +PL+ +E Q + F DRL L D+ ++A+L + Sbjct: 512 GGLSLPLNTLLEQTLSVFQHEFDHDTALQAVEEFIFDRLSGSLRDQGYSVQEVDAVLAMK 571 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 L I ++ + F S + + KR+ IL K + I I+P L +A Sbjct: 572 PQLLGDITKRLEAVRAFASLPEAASLAAANKRVGNILK---KSDSAIEAAINPALLQEDA 628 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK L ++ Q++ Y L ++ P++ FFD V+VN +D ++ NRL+ Sbjct: 629 EKTLAQALAQVQPQAQQAFAAGDYTGSLKALAALKAPVDAFFDHVMVNAEDPALKTNRLA 688 Query: 684 LLQYIKNIILIVINVQKI 701 LL + + V ++ ++ Sbjct: 689 LLATLHQAMNQVADLSRL 706 >gi|296313940|ref|ZP_06863881.1| glycyl-tRNA synthetase, beta subunit [Neisseria polysaccharea ATCC 43768] gi|296839480|gb|EFH23418.1| glycyl-tRNA synthetase, beta subunit [Neisseria polysaccharea ATCC 43768] Length = 687 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 210/710 (29%), Positives = 346/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I K DVY + + + ++L+ Sbjct: 76 GPAVANAVKDGVPTKALEGFARGAGAKIEDLTIIH--DGKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHRLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEITIENADSYAEQMREQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 L+ W I P+G KDPYALRRA+LGI+R++++ +D+ L Sbjct: 461 ILVGIWGIGLIPTGDKDPYALRRASLGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 S KR+ +L KK E+ L + EK L+A I ++ + Sbjct: 580 SNKRVQNLL----KKADAALGEVDESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|74318365|ref|YP_316105.1| glycyl-tRNA synthetase subunit beta [Thiobacillus denitrificans ATCC 25259] gi|123731722|sp|Q3SGF0|SYGB_THIDA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|74057860|gb|AAZ98300.1| glycyl-tRNA synthetase, beta subunit [Thiobacillus denitrificans ATCC 25259] Length = 701 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 204/728 (28%), Positives = 358/728 (49%), Gaps = 60/728 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K E + L L +G+++ + + +P RL +++ + Sbjct: 4 ANLLVELFVEELPPKALKKLGEAFAAALTESLVAQGLVHAQAAVTHFASPRRLGAHIENV 63 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLA 111 S +K + +L P G A+ L + G + ++++ K + Sbjct: 64 LERSADKPVSTKLMPVSVGLDADGNATPALLKRLAALGADASAVATLRRESDGKAEALFM 123 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + L + ++ K+P PK M + S +++RP+ ++ + + Sbjct: 124 DSVAKGISLGLGLAKALWESLDKLPIPKVMSYQLADG-WSTVNFVRPVHGLVALHGTDP- 181 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAIL 229 +D+ + + G T+GHRF A PI ++ D Y + LE V+ + RR I+ Sbjct: 182 ----VDVRMFGLTAGRKTHGHRFEAAADPIVLKDADSYAQQLESEGAVIANFAERRAEIV 237 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A+ +GL VED+ LL+E+ LVE V +G F++ +L +P+E + LT+K NQK Sbjct: 238 RQLEAAAAPLGLVPVEDEALLDEVTALVERPNVLLGQFEQAFLEVPQECLILTMKANQKY 297 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L N F++VSNI +D +A+V GN RVV RL DA F+ +D+ Sbjct: 298 FPLLDAAGKLTNKFLIVSNISPADA-SAVVGGNERVVRPRLADAKFFFDQDR-------- 348 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K LD R+ L + VV+H K+GTQGERV+R++ + + I + + + Sbjct: 349 ------------KKTLDARV--LGLAKVVYHNKLGTQGERVTRVQAVARAIGEKLGGEAL 394 Query: 410 --LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 D+A +L+KADL T++V EFPELQG +G+ YA AIE+H +PR ++ Sbjct: 395 ALKADQAALLAKADLLTDMVGEFPELQGVMGRYYAQHDGVADDVAFAIEDHYRPRFAGDD 454 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P N + + V+LADKL+TL+ + I EKP+G KDP+ALRR LG++R+++E + I L++ Sbjct: 455 LPRNPVGVCVALADKLETLVGLFGIGEKPTGDKDPFALRRHALGVVRMLIEKHLPIGLNE 514 Query: 528 F--------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ++ LF +RL + ++ + ++A+L + + Sbjct: 515 LVSIAFSAFQQGLLGQAHTDVYLFMFERLSGAMREQGYSANEVDAVLSLNPIRIDLVPQQ 574 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + F + + + KR+ IL E E+ P + AE+ L+A + + Sbjct: 575 LEAVRAFAALPEAAALAAANKRVGNILKKAE---GEVGASADPGRFVEAAERALFAALDE 631 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y L ++ P++ FFDQV+VN DD +R NRL+LL + + Sbjct: 632 VAPRAAAAFGSGDYTASLQALAALKAPVDAFFDQVMVNADDPALRANRLALLNQLHRTMN 691 Query: 694 IVINVQKI 701 V ++ ++ Sbjct: 692 RVADISRL 699 >gi|293556343|ref|ZP_06674924.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1039] gi|291601410|gb|EFF31681.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1039] Length = 691 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 210/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L + + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDKNQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KYTHGKEAKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++II ++ ++ + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEIIPFEILDVKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N + +GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVGRGNQKVLTARLEDAEFFYNEDK----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + D ++ Sbjct: 335 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVRLSDEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T ++ EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 384 DLQRAAEIYKFDLVTNMIGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 621 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|160896736|ref|YP_001562318.1| glycyl-tRNA synthetase subunit beta [Delftia acidovorans SPH-1] gi|238687203|sp|A9BXZ8|SYGB_DELAS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|160362320|gb|ABX33933.1| glycyl-tRNA synthetase, beta subunit [Delftia acidovorans SPH-1] Length = 704 Score = 564 bits (1453), Expect = e-158, Method: Composition-based stats. Identities = 204/730 (27%), Positives = 344/730 (47%), Gaps = 61/730 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN---MRQYWTPHRLFLYLKG 58 + L+E++ EE+P + K + + +L LK +G++ + + Y +P RL ++ Sbjct: 4 SNLLVELFVEELPPKALQKLGDAFAGVLFEQLKAQGLLASSEARLTAYASPRRLAAHITE 63 Query: 59 LSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDC-QIKKDPKKGDVYL 110 + P + +K + ++L P G A+ L + G + ++ K + Sbjct: 64 VLPQAEDKAVSQKLMPVSVGLDADGKPTPALIKKLAALGAGEEAVAGLTRQGEGKAEALF 123 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 ++ D ++ + AI K+P PK MR+ S+ ++RP ++ + E Sbjct: 124 HSSTVRGVMLADGVQKALDEAIAKLPIPKVMRYQLADG-WSSVHFVRPAHGLVVLHGTEV 182 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAI 228 I + + G T+GHRF A P+ ++S D Y L E V+ RR I Sbjct: 183 L----IGVKALGLTAGTATHGHRFEAAVDPVVIRSADDYAAQLREEGAVIASFAERRAEI 238 Query: 229 LNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 A +G +ED+ LL+E+ LVE V + F+K++L +P+E + LT+K N Sbjct: 239 ARQLQAAAERLGGGVRPIEDEALLDEVTALVERPNVLVCEFEKEFLDVPQECLILTMKAN 298 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F G L + F++VSNI D +A++ GN RVV RL DA F+ +D+ Sbjct: 299 QKYFPLLDAAGKLTHQFLVVSNISPQDA-SAVIGGNERVVRPRLADAKFFFDQDR----- 352 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 K L R+ L VV+H K+GTQGERV R+R + K IA+ + Sbjct: 353 ---------------KKTLASRVEGLG--KVVYHNKLGTQGERVERVRSIAKSIARQLGD 395 Query: 407 D--VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D A L+K DL T++V EFPELQG +G+ YA+ +++ DAIE+H KPR Sbjct: 396 TGLAQQADLAAQLAKTDLVTDMVGEFPELQGTMGRYYALNDGLDVAVADAIEDHYKPRFA 455 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E + + Sbjct: 456 GDELPRGNAGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVEKDLALD 515 Query: 525 LSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 L L F +DRL L ++ ++++L L + Sbjct: 516 LETLLVSVLPAFGDKIEDATPQLADFIYDRLAGNLREQGFSAQEVDSVLALRPQRLSDVQ 575 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + F + + KR+ IL K ++ + ++ L AEK LYA + Sbjct: 576 KRLEAVRAFGELPEAPALAAANKRVGNILK---KADQAVQAQVDAAVLAEVAEKDLYAAL 632 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 Q+ Y L ++ P++ FF+ V+VN +D ++ NRL LL + Sbjct: 633 QSVAPKAQQQFAAGDYTASLQTLAALRAPVDAFFEHVMVNAEDPALKANRLGLLATLHEA 692 Query: 692 ILIVINVQKI 701 + V ++ ++ Sbjct: 693 MNRVADLSRL 702 >gi|149914420|ref|ZP_01902951.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. AzwK-3b] gi|149811939|gb|EDM71772.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. AzwK-3b] Length = 751 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 261/775 (33%), Positives = 389/775 (50%), Gaps = 100/775 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA DL + L E G+ Y + + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAADLRARMTDGLVEAGLTYSGAQAFATPRRLTLAVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EE GPR A +KAI+GFLR G+ +D KKG V+ A + +P R Sbjct: 61 AASPTVTEELKGPRADAPEKAIEGFLRGAGVTREELEI--RDEKKGQVFYAKIMRPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ ++ ++ PWPK+MRW + W+RPL+SILCIL + + +I+DL++ Sbjct: 119 EAIVAEVLDHVVRNFPWPKAMRWGAG-----SLRWVRPLQSILCILTDDAGEARIVDLEI 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N T GHRF V S + Y L+ V+LD + R + I +DA A A G Sbjct: 174 DGIKACNTTEGHRFMGGGQFAVSSFEDYEAGLKRDHVILDAQQRADHIWHDATSQAFAAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVEW V MG D+++L LP E+++ ++K +QK F R Sbjct: 234 LEVVEDQGLLSEVAGLVEWPVVLMGQIDEEFLGLPAEVLQTSMKEHQKFFSVRNPATGRI 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+NI+++D GA I+ GN +V+AARL DA FW+ D Sbjct: 294 ERFITVANIESADHGATILAGNQKVLAARLSDAKFFWENDLRIAHA-------------- 339 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +++ + +L +V F ++GTQ R+ RI L + IA + AD ++A ++KA Sbjct: 340 ---GMEEWIEQLS--NVTFQRQLGTQAARIRRIAALARDIAADVGADAGRAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A EEH +P GP + VP +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPDDVAAACEEHYRPLGPSDAVPVAPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ------------- 527 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IRIIL+ + L + Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRIILDGGFRLKLDRYIDAQLLRHKISL 514 Query: 528 ----------------FIEDQNLILF------FHDRLK-----LYLHDRDIRHDLIEAIL 560 E + +F DRLK + + + + + Sbjct: 515 NHAKASDDEIDTLEEVLDEIADHGVFGAAFWAVMDRLKEKDGGPDTEEGSLLRTVGDLVP 574 Query: 561 RPENDNLLTIVDLIK-----------HLNEFFSSAKGEKFL------------------- 590 D L+ D +K ++ G+ Sbjct: 575 DLSTDLLVFFHDRLKVYLRDQGLRHDVIDACLMLDGGDDLALIVARAKALGDVLETEDGV 634 Query: 591 ---LSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 KR IL+ E+K+ E S P++ + EK L++ ++ I ++ + Sbjct: 635 NLVQGFKRANNILSQAEEKDGVEYSFGADPKFAEVSEEKYLFSALAKAEDEIAKANAVED 694 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ PI+ FFD V VN D++ VR NRL+LL I++I L ++ K+ Sbjct: 695 FVGAMAAMAALRGPIDAFFDAVQVNTDNQVVRRNRLNLLGKIRDICLQAADLTKL 749 >gi|308271400|emb|CBX28008.1| Glycyl-tRNA synthetase beta subunit [uncultured Desulfobacterium sp.] Length = 699 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 207/728 (28%), Positives = 342/728 (46%), Gaps = 62/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLEI EEIPA A + LS IL+ L +E + + N + + TP RL + + +S Sbjct: 7 METLLLEIGMEEIPAGYIEPALKALSAILMQRLTDERIKHGNYKTFGTPRRLCICIYDVS 66 Query: 61 PHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 E +GP G A F + S K +KG A+ Sbjct: 67 AKQDSLTTEIIGPPEKIGFDGNGQLTIAGKKFAEKACISPESIN--VKQTEKGSYLCALK 124 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + VLK I+P I ++P+PK M+W+ + RP++S+ +L Sbjct: 125 TESGIESKTVLKRILPQIILQIPFPKVMKWADLD-----IKFARPIQSVAALL-----GR 174 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I +L I T+GHRF P IK+ D YI L++A VL D + R+N+I Sbjct: 175 QLISFELGNIKSSGNTFGHRFLCPGKIKISHPDEYIEKLKKAFVLADIDERKNSIKEHIA 234 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++A+ + +++D +L++ + LVE+ GSFD+ YL +P+E++ +++ +QK F Sbjct: 235 QIAAKLDGNVLKDDELVDVVTNLVEYPVPVAGSFDRSYLEVPDEVLINSMREHQKYFAII 294 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSN QA + +V+G+ RV+ ARLEDA F+K D + P Sbjct: 295 DANKRLLPNFIAVSNTQAKNM-QVVVKGHERVLKARLEDARFFYKNDIHISP-------- 345 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VAL 410 D + +L V+F AK+GT E+ R+ L + +A I D Sbjct: 346 ------------DDWVEKLK--GVLFQAKLGTMYEKTQRLEKLSQYLADEITDDAQIKKQ 391 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L KADL +++V EFP+LQG +G+ YA E+ + A+EEH +P +P Sbjct: 392 ALRAARLCKADLVSQVVGEFPKLQGIMGRIYAANAGEDKNVSIAVEEHYRPAYSGGELPE 451 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I V++ADK+D++ ++ P+G+ DPYALRR +GII+I+L L IE Sbjct: 452 TTIGSMVAIADKIDSICGCFSAGLIPTGASDPYALRRQGIGIIQIMLAKGFSFSLRSLIE 511 Query: 531 D-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 N+ F R+ L + +++ AI+ ++ + Sbjct: 512 KSLSLFEIKDAIEITGRADNVYGFLQSRISHLLTEEGYAKNVVSAIVSISVSHVPDVWKR 571 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 L + + + E+ + KR+ I+ +N I+ E E L++ D Sbjct: 572 TIALEKLKAVSDFEQLATTFKRVVNIIKKSAPENAGCETNINEGLFEKECESALFSAYKD 631 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + E++ Y Q + S+ P++ FFD VLV +D +R+NR++LL+ I ++ Sbjct: 632 IKIRVSENLLQGAYEQSLLDIASLRTPVDAFFDGVLVMAEDENIRNNRIALLRAISDLFA 691 Query: 694 IVINVQKI 701 + + K+ Sbjct: 692 LFADFSKL 699 >gi|323524767|ref|YP_004226920.1| glycyl-tRNA synthetase subunit beta [Burkholderia sp. CCGE1001] gi|323381769|gb|ADX53860.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1001] Length = 700 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 203/714 (28%), Positives = 334/714 (46%), Gaps = 60/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + + L +I + +Y TP RL + +K + +PE+ E+ Sbjct: 19 PPKALARLGDAFAEGIAERLAARDLIEGELSFERYATPRRLAVTVKNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P + G + L + G S +++ K + + P + + Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFSVSDLERAQDGKAEAFFLRYAAPGATLAEG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP + + E ++ + I Sbjct: 139 LQGALDETLAKLPIPKVMTYQRPDG--SNVQFVRPAHRLTAL-----HGEHVVPVSALGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 + T GHRF + +++Q D Y+ L V+ + R+ I A G + Sbjct: 192 DADDTTLGHRFLSEGFVQIQHADSYVDTLMHKGRVVPNFADRKETIRTHLLAHA--DGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYSCRFEAEFLQVPQECLILTMQTNQKYFALTDANGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ + G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETATPGD-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ +RV R+ L IA L ADVAL RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSALQRVERLESLAGAIAALTGADVALAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +P V+LADK Sbjct: 407 ITDMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPATATGTVVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+TL+ W I +P+G KDP+ALRR LG++RI++E ++ + + Sbjct: 467 LETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLPVDFVELLRTAHAQFAALPNV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 Q + F DRL+ L +R I+A+L L IV + + EF + + Sbjct: 527 TDSTQAIYEFSMDRLRGLLRERGHAPGEIDAVLALNPTRLDDIVARLDAVREFAALPEAA 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL E S + P L+ AEK L+A + +Q + + Y Sbjct: 587 SLAAANKRISNILKKSE--GATASGGVQPALLVEAAEKALFAQLEQVAPRVQSQLAARDY 644 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 645 TGALTALAALREPVDTFFNDVMVNAEDPALRANRLALLGALHQQMNCVADISRL 698 >gi|329894834|ref|ZP_08270634.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium IMCC3088] gi|328922728|gb|EGG30062.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium IMCC3088] Length = 694 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 209/723 (28%), Positives = 341/723 (47%), Gaps = 61/723 (8%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D FL+EI +EE+P + A+ ++ + + + + TP RL + + L Sbjct: 8 MSDAFLIEIGTEELPPKSLRALAQSFHDEVVAGFSHLNLAPVDSKWFATPRRLAVRINQL 67 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 SP+ E LGP G A GF + G+ + I D KG Sbjct: 68 PSRSPDTQEIVLGPPAAAAKNDAGEWTPAAIGFAKKQGVSADALELI--DSDKGPRLGFT 125 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P E V +V A+ K+P K MRW ++ + ++RP+ ++C+ D Sbjct: 126 KTVPGAQTELVAAHVVNEALAKLPIAKRMRWGSSRT-----EFVRPVHWVVCLYGDNDDL 180 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + + +++GHRF AP PIK++S Y DL A V+ + E R+ IL Sbjct: 181 G-----TIFGLTASRVSHGHRFMAPEPIKIRSAATYEEDLLAAKVIANYEKRKAMILKQV 235 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ + D DLL+E+ LVEW G FD+ +L +P E + ++K +QK F Sbjct: 236 KNLAATYSADAQIDDDLLDEVTALVEWPVALSGEFDRDFLRVPSEALIASMKEHQKYFHL 295 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + EG L FI V+NI++ + IV GN RV+ RL DA F+ D Sbjct: 296 QDAEGELLPRFITVANIESPE-PERIVHGNERVIRPRLADAAFFYDTD------------ 342 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L L R L+ + F K+G+ ++V R+ L IA I AD ++ Sbjct: 343 --------LKTRLADRRIVLE--KMTFQHKLGSVYDKVVRVASLASFIATKIGADASIAA 392 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 R L+K+DL +E+V EFPELQG G YA + D IE+H PR +++P N Sbjct: 393 RGAELAKSDLASELVNEFPELQGIAGAYYARAEGLGDEIADVIEQHYLPRFATDDLPDNL 452 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 + V++AD+ DTL +AI E PSGSKDP+ALRRA+L ++R+I++N +++ L++ + Sbjct: 453 EATAVAIADRCDTLAGIFAIGEIPSGSKDPFALRRASLAVLRLIIDNNLNLDLAELFSEA 512 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++LI + ++R + I + A++ + L + L Sbjct: 513 LRRLPFDVPPNSLESLIAYLNERYYARYEAQGIPITTVRAVINQGVNEPLDFQRRLNALV 572 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + KR+ ILA + S E L+ AE L + + Sbjct: 573 VFSDMPEALALASAYKRVGNILAKADASKPIYSDE----LLVETAEHALAKALQALKPAL 628 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++++ K Y L S+ EP+++FF++V+VN +D ++R NRL LL + + V ++ Sbjct: 629 DKAINAKDYSGYLTHLASLREPVDVFFNEVMVNAEDDKLRQNRLGLLATLAALFGAVADL 688 Query: 699 QKI 701 +++ Sbjct: 689 KEL 691 >gi|260575527|ref|ZP_05843525.1| glycyl-tRNA synthetase, beta subunit [Rhodobacter sp. SW2] gi|259022170|gb|EEW25468.1| glycyl-tRNA synthetase, beta subunit [Rhodobacter sp. SW2] Length = 746 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 251/771 (32%), Positives = 378/771 (49%), Gaps = 97/771 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA DL ++ L E G+ Y + TP RL L L+GL+ Sbjct: 1 MPDLLIELFSEEIPARMQARAAADLKKLVTDGLVEAGLTYAGAGAFSTPRRLVLSLEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HS EER GP A + A+ GFLRSTGL +D KKG V+ AV+ KP R Sbjct: 61 AHSQALREERKGPAATAPEAALQGFLRSTGLAREQLEL--RDDKKGQVWFAVIEKPGRAA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ ++ I+ PWPKSMRW + W+RPL SILC+L E +++ L + Sbjct: 119 AAIVAEVLEATIRNFPWPKSMRWG-----TGSLRWVRPLHSILCLLTDE-HGPQVVPLSV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G T GHRF +P V D Y L+ A V+LDP R I +DA A A G Sbjct: 173 DHLNAGATTEGHRFMSPGRFAVTGFDDYAAKLKRAHVILDPAAREAQIWHDATTQAFARG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V D LL E+ GLVEW V +G+ +L LP E+++ +++T+QK F + + Sbjct: 233 LEVVPDAGLLAEVAGLVEWPVVLLGAIAPGFLDLPPEVLQTSMRTHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN++V++ARL DA FW+ D + + +A Sbjct: 293 EGFVTVANRETADHGATILAGNNKVLSARLSDAKFFWENDLRTVHAVGMEGMAA------ 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + V FH K+G+Q +RV+RI L ++IA L+ A L A + KA Sbjct: 347 ------------GLAHVTFHNKLGSQADRVARIEALAREIAPLVGAAPDLAAEAARICKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G+ YA + +A E H KP G ++VPT+ +S+ V+LA Sbjct: 395 DLQSAMVAEFPELQGLMGRYYATAAGHDDGVPEACEMHWKPLGAADDVPTDPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + L + + Sbjct: 455 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLGNGVRASLIKAMNTGEKGH-IFH 513 Query: 541 RLKLYLHDRDIRHDLIE----------------------AILRPENDN------------ 566 R+ + ++ D +E +L + + Sbjct: 514 RVAVKEREKQDVLDALEVNVGAREEITTIRRTATVETGTRVLVSGSFDDGTALHASTQVL 573 Query: 567 --LLTIVDLIK-----------HLNEFFSSAKGEKFLLSAKRIFQILA------------ 601 L D +K ++ + + L KR + A Sbjct: 574 DLLAFFHDRLKVFLKDQGIRHDVIDACLAMPGNDDLTLLVKRAQSLAAFLKTEDGPNLLQ 633 Query: 602 -----------IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 E K E S P++ + E+ L+ + + +M + + Sbjct: 634 GFKRANALLSQAEAKDGVEYSYGADPKFAETDEERALFTALDQAEAVLTPAMKTEDFAAA 693 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ P++ FF+ V VN D+ R NRL+LL I+++ V ++ KI Sbjct: 694 MAAMATLRAPVDAFFEAVQVNSDNPITRRNRLNLLHRIRSLCAQVADLTKI 744 >gi|283850610|ref|ZP_06367897.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. FW1012B] gi|283573853|gb|EFC21826.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. FW1012B] Length = 697 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 195/730 (26%), Positives = 319/730 (43%), Gaps = 64/730 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FL EI EE+PAR A ++ + L + + + + TP RL + + L+ Sbjct: 1 MSHFLFEIGFEEMPARFLSGLASEVRTLFTDALAQAKLDASAVTAFATPRRLVVSIPELA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S + E GP G A GF + G + KG Sbjct: 61 ADSRREEELVTGPPERVGFDASGNPTPAAVGFAKGQGKDVAD--VFVMETGKGRYLALNK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +L + A++K+ +PK MRW + F++ RP+ L +L + Sbjct: 119 TTGGEPAMALLPGMCLEAVKKLSFPKRMRWGSRD-----FAFGRPVHWFLALL-----GD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDA 232 ++ +L I G T GHR P P V + Y + + V+LD R + + + A Sbjct: 169 AVVPFELDGIVSGRRTRGHRIMGPGPFDVAAAKDYFGIIRDQGKVVLDARERESLVRSQA 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA G V + LL E+ GL E V +G D K+L +P E++ +++T+QK F Sbjct: 229 ETLAREAGGTAVINPALLAEVTGLTEHPVVLLGRLDPKFLDVPREVLITSMETHQKSFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ + + + +G RV+ ARLEDA FW+ D Sbjct: 289 EDGKGGLLPVFLTTLGLVPGNV-DLVRRGWQRVLTARLEDARFFWEAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-- 410 L+ L+ +L+ VVF A +G+ ++ R+ L +A+ + Sbjct: 336 --------LATDLETWQKKLE--SVVFLAGLGSMRDKARRLERLCGVVAEQAGKPEVMLE 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +A L+K DL +++V EF ELQG +G Y + ++ + AI E P GP VP Sbjct: 386 ASQAGGLAKVDLVSDMVGEFAELQGIMGGIYVRRKGQSKTVSRAIAEQYLPAGPDSPVPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +SLADK DTL + ++ P+G+ DPYALRRA LGI RI++E+ + + L + ++ Sbjct: 446 TLAGAVLSLADKADTLAGCFGLDMAPTGAADPYALRRAALGICRIVIEHGLRLNLMELLQ 505 Query: 531 DQ------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 L+ FF RLK Y R ++EA ++ + Sbjct: 506 AALDGYGEVKFKVDRTHILARLLDFFGQRLKAYFTGRGFDTLVVEAAAGASFTDIAELAA 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRLYAVI 631 I L F + + +L+ KR I+ + + ++ + L +AEK L AV Sbjct: 566 RIPALAAFAAKPDFGQAVLTFKRAANIIRKQGVGAGQPLTGLVKAALLEEQAEKDLAAVC 625 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 +D + Y + DLL+ + ++ FFD V+V DD +VR NRL+LL+ + + Sbjct: 626 ADVFPRYDALFEAGDYAGVLDLLYELRPTVDAFFDNVMVMCDDMDVRLNRLNLLKSLVDR 685 Query: 692 ILIVINVQKI 701 + V + + Sbjct: 686 LGRVADFAAL 695 >gi|154251184|ref|YP_001412008.1| glycyl-tRNA synthetase subunit beta [Parvibaculum lavamentivorans DS-1] gi|154155134|gb|ABS62351.1| glycyl-tRNA synthetase, beta subunit [Parvibaculum lavamentivorans DS-1] Length = 741 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 258/760 (33%), Positives = 375/760 (49%), Gaps = 104/760 (13%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +A EDL ++ LK GV +N R + TP RL L + GL +P+ EER G Sbjct: 13 IPARMQKRAGEDLVRLVTDALKAAGVEGKNARAFATPRRLALVIDGLPDKTPDVKEERKG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P+VGA ++AIDGFLR+ GL +I + +++D KKG Y+AV K R ++ IVP I Sbjct: 73 PKVGAPQQAIDGFLRAAGLASIDEATVQED-KKGAFYVAVTEKQGRDTAALIAEIVPAVI 131 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 + PWPKSMRW + + W+RPL SILC+L K+++ ++ I GN T GH Sbjct: 132 RAFPWPKSMRWGSG-----SLRWVRPLHSILCLLGG-----KVVNFEVDGIKSGNTTRGH 181 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 RF AP V Y L +A V+LDP R + I A LA A GL LVED+ LL E Sbjct: 182 RFMAPDAFVVTDFADYEMKLLDAKVVLDPAKRAHFIHAGAKALAEAEGLVLVEDEALLHE 241 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GLVEW +G D +++ +P+E++ T++ NQK F + G LA F++++N++A Sbjct: 242 VAGLVEWPVPLIGRIDDEFMSVPQEVLTSTMRANQKYFALHDKTGKLAPRFVVIANLEAE 301 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 DGG AIV GN RV+ AR DA W +D+ L R+ +L Sbjct: 302 DGGKAIVNGNERVLRARFADARFLWDQDR--------------------KHTLTSRLPKL 341 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVLSKADLCTEIVREFP 431 +VVFHAK+GT ++ RI L +++A + AD A L+KADL T +V EFP Sbjct: 342 Q--EVVFHAKLGTVHDKAMRIGKLARELAAFVPGADPDKAQIAGELAKADLTTGMVGEFP 399 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 ELQG +G YA + AI EH P GP + VP + V+LADK+DTL+ FWA Sbjct: 400 ELQGLMGAYYARNDGLDDEIAAAIAEHYAPLGPTDAVPLTPLGRVVALADKIDTLVGFWA 459 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---------DQNLILFFHDRL 542 I+EKP+GSKDPYALRRA LG+IR+++E +I + L Q E + + + ++ Sbjct: 460 IDEKPTGSKDPYALRRAALGVIRVVMEGQIRLSLVQIFETAQNELRLSTEQVSVELLNKS 519 Query: 543 KLYLHD----------RDIRHDLIEAILRPENDNLLT----------------IVDLIKH 576 D ++ + + D +K Sbjct: 520 DAKESDTLGLDLGAKSLGYASVHERSVRGASVRVIRSGRRVFGESIESQLLSFFADRLKI 579 Query: 577 -----------LNEFFSSAKGEKFLLSAKRI----------------------FQILAIE 603 ++ F+ + +L KR+ IL IE Sbjct: 580 YLRDRGARHDLVDAVFALEGQDDLVLIVKRVEALSEFLATEDGKNLLAGYKRATNILRIE 639 Query: 604 EKKNRE--ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 E+K+ E + + EK L A I + ++ + + L + P+ Sbjct: 640 ERKDGEGAFNAAPDASLFAQDEEKALGAAIEAATKEAKAAVAKEDFAAAMSALAKLRAPV 699 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + FF++V VN DD +R NRL LL I+ + V + K+ Sbjct: 700 DAFFEKVTVNADDAALRANRLKLLAQIRAALHEVADFSKV 739 >gi|254507339|ref|ZP_05119475.1| glycyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus 16] gi|219549799|gb|EED26788.1| glycyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus 16] Length = 688 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 200/703 (28%), Positives = 331/703 (47%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGADLAHEGVKWYAAPRRLALKVSAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEGQADKVVEKRGPAVSVAFDADGNATKAAQGWARGNGITVEQADRLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQATSEIVVELAAKALGNLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF ++S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 SQKAAAAVGGTADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDNNKKLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ I Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++I F R + D+ D+I+A+L +K Sbjct: 505 SQSLFGDKLTNANVADDVIEFMLGRFNAWYKDQGFSVDIIQAVLANRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELAAEIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLAGLREPVDAFFDNVMVMADDEALKK 664 >gi|320160283|ref|YP_004173507.1| glycyl-tRNA synthetase [Anaerolinea thermophila UNI-1] gi|319994136|dbj|BAJ62907.1| glycyl-tRNA synthetase [Anaerolinea thermophila UNI-1] Length = 998 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 201/723 (27%), Positives = 321/723 (44%), Gaps = 68/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA A E L + LL E + + ++ TP RL + ++ LSP Sbjct: 316 FLLEIGTEELPAADLQSALEQLREKVPALLDELRLSHGEVKVMGTPRRLAVLVENLSPAQ 375 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ GP G KA +GF RS GL + ++ G +A + + Sbjct: 376 PDRTTVVKGPPAARAFDAQGQPTKAAEGFARSRGLDVSALK--VQEIDGGQYVVAEVFEK 433 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R DVL +P I + + K+MRW+ S ++ RP++ + +L + +I Sbjct: 434 GRSAVDVLSEALPDLIASLRFDKTMRWNA-----SQVAFSRPIRWLAALLGS-----TVI 483 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + +T G RF+ P + + Y L +LLDPE RR +I RL Sbjct: 484 PFEYAGLRADRVTRGLRFYQPETFTLNTAAEYQNVLRSQGILLDPEERRASIAEQVQRLM 543 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + G D+ LL+E+ LVE +G+FD +L LP E++ +K +Q+ F Sbjct: 544 TEAGGVPKLDESLLDEVTQLVEAPTAVLGTFDPAHLKLPAEVLISVMKKHQRYFPVYAST 603 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V N + + GN++V+ AR DA F + D Sbjct: 604 GELLPYFITVRNGD-NQYLDIVADGNAQVIGARFADASFFIQED---------------- 646 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDR 413 L L++R+ RL + F K+G+ ++ R+ L K+A D+A R Sbjct: 647 ----LKYTLEERLPRLGT--LTFQYKLGSMLDKSRRVEALVDKLAPFFGLSQSDLATARR 700 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL T +V E LQG +G+ YA E DAI EH PR + +P Sbjct: 701 AAYLLKADLVTHMVIEMTSLQGIMGRYYAEHSGEPKGVADAIFEHYLPRFAGDALPETLP 760 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 I +S+AD+LDTL +A PSG+KDP+A RRA LG++++++ +I L Q + Sbjct: 761 GILLSVADRLDTLSGLFAAGLAPSGTKDPFAQRRAALGLVQVLISRQIPFDLRQGLALAA 820 Query: 531 -----------DQNLILFFHDRLK-LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + F + RL+ + D R+D+++A++ + N + L Sbjct: 821 QGLPITASEESQNACLEFIYGRLRTHLMDDYGFRYDVVDAVMAEQAHNPFGAYRAAQALT 880 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 + A L + R +I ++++ + P+ + E+ LYA + Sbjct: 881 AWVQRADWNTILPAYARCVRITRDQKEQ-----FAVQPERFVEVEEQALYAALLQAEAAP 935 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++ + + I FFD VLV +D VR NRL LLQ I + V + Sbjct: 936 RQPGSVDDFFAAFLPMI---PVINRFFDTVLVMAEDAGVRANRLGLLQRIAALTRGVADF 992 Query: 699 QKI 701 K+ Sbjct: 993 SKL 995 >gi|58040174|ref|YP_192138.1| glycyl-tRNA synthetase beta chain [Gluconobacter oxydans 621H] gi|58002588|gb|AAW61482.1| Glycyl-tRNA synthetase beta chain [Gluconobacter oxydans 621H] Length = 684 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 236/722 (32%), Positives = 358/722 (49%), Gaps = 61/722 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F +E++SEEIP+ MQ AA +L +L L G+ +++R ++ R+ L + Sbjct: 1 MAEFFIELFSEEIPSGMQAGAAVELGNMLAKALS--GLNPRDLRTFFGARRIAASLT-VD 57 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P + GPR GA +KA+ GF R G+ + G L P Sbjct: 58 AEIPARNVSERGPREGAPEKALAGFTRKHGVTPDELTL-----ENGFWVLNKSLDP-VSA 111 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL-- 178 E + VP + K PWPKSMRW S F+W+RPL+ I C+L ++ Sbjct: 112 ESRVAEAVPELLWKFPWPKSMRWGAG----SNFTWVRPLRRIACLL-----DGHVVPFAL 162 Query: 179 -----DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 D + N++ GHRF AP P ++ S + +LE V++D + RR+ + Sbjct: 163 AREGDDAHGLKASNLSEGHRFLAPGPFEILSGQQWQEELETRSVIVDMDSRRDMVRTGVT 222 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 RLA G+ +V+D L++E+ GLVE+ +G D ++ LP E+++++++ NQ+ F R Sbjct: 223 RLADQHGIMVVQDDGLVDEVCGLVEYPVPLLGKIDAAFMDLPAEVMQVSMRINQRYFALR 282 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G A F V N+ DGG GN RV+ AR DA HFW D+ Sbjct: 283 NPDGKAAPYFAFVGNLPFKDGGKLTTAGNERVLRARFADARHFWDLDR------------ 330 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VAL 410 L R+ L V FHA++GTQ ER RI L +AQ + D +A Sbjct: 331 --------KTKLADRVPAL--AAVTFHAELGTQAERAERISKLAGTVAQAMGLDGAQIAQ 380 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +RA +L+KADL T +V EFPELQG +G YAV E+ + A+ EH PRG ++ Sbjct: 381 AERAGLLAKADLTTGMVGEFPELQGVMGGYYAVHDGEDEAVSRAVAEHYLPRGQSDDTAK 440 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 +S+ V+LAD+LD L F+AI E PSGS DPYALRRA LGIIR I +N + + LS+ Sbjct: 441 APVSVAVALADRLDLLAGFFAIGELPSGSGDPYALRRAALGIIRTIRDNGLRLDLSELFA 500 Query: 530 ---------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLNE 579 E L F +RL++ L RHD++ A L D +L+ ++ L+E Sbjct: 501 QAANGRTGGELAKLPDFIAERLRVQLRSEGERHDVLAATLAGGLDGDLVRLLARTSALSE 560 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + G L +AKR IL IE+KK+ + P + E+ L + I+ Sbjct: 561 MIQTEDGRNLLAAAKRAANILRIEDKKDGPHTGAPDPALYTQDEERALATGLDQAVPAIE 620 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ +R+ + ++ ++ FF+ V VN + EVR NRL LL + ++ + Sbjct: 621 TALKEERFTDAMQAIAALRPTLDRFFEAVTVNTPEPEVRANRLKLLSCFRETTALIADFG 680 Query: 700 KI 701 +I Sbjct: 681 QI 682 >gi|332975857|gb|EGK12735.1| glycyl-tRNA synthetase beta subunit [Desmospora sp. 8437] Length = 696 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 192/734 (26%), Positives = 338/734 (46%), Gaps = 73/734 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M ++L+EI EEIPAR + L L L+E + + + Y TP RL + ++ Sbjct: 1 MAEQNWLVEIGCEEIPARFVESGVQQLREKLTRWLEENRLSFGKVHTYATPRRLAVLVEN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G+ KA +GF R G+ ++ K A Sbjct: 61 VADAQADVEEEVRGPAKRIAVAEDGSWTKAAEGFARKQGISPDQLQL--REYKGETYVFA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ + ++ + +PK+MRW + +IRP++ ++C+ Sbjct: 119 HKHQEGKRTATLIGEELANVLKGLHFPKAMRWGDRRT-----RFIRPVRWLVCLF----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+++ + + GN T+GHRF ++ Y+ L + V+++ E RR I Sbjct: 169 GEEVVPVKWAGVTGGNRTFGHRFLG-GETEIGQPADYVETLHDQKVMVEMEARREEIRQQ 227 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 HR+ G + D++LL+E+ LVE GSFD+++L LPE ++ T++ +Q+ F Sbjct: 228 LHRMEEQNGWRIPVDEELLDEVTQLVELPTALSGSFDERFLELPEAVLITTMREHQRYFP 287 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R R+ L F+ V N + +GN +V++ARL DA F++ D Sbjct: 288 VRDRDHHLLPHFVTVRNGDNR-ALEQVAKGNEKVLSARLADARFFYEED----------- 335 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL- 410 L + +A+LD VV+ +G+ G++ RIR L +++A + + Sbjct: 336 ---------LKLSISTAVAKLDQ--VVYLEGLGSVGDQARRIRKLVEELADQLGLENPER 384 Query: 411 --VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPEL G +G+EYA E+ AI EH PR + + Sbjct: 385 SRLFRAADICKFDLSTHMVDEFPELSGVMGEEYARRAGEDPEVARAIMEHHYPRFAGDRL 444 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI------- 521 P ++ +SLADK+D ++ +++ +P+GS+DPY LRR ++ I+++ Sbjct: 445 PEGRLGSLISLADKMDAVVAAFSLGIQPTGSQDPYGLRRKASAVVHILMDRGWSRLPLSL 504 Query: 522 --DIPLSQFIED-----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 D+ L++ D + + FFH RLK L ++ IR+DLI+A+L + + Sbjct: 505 LIDLSLNRLQADGWLQRDREQVKEEISAFFHLRLKGALQEKGIRYDLIDAVLLSDLSSPQ 564 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 +++ + L + + + + R + A L+++ L + AE+ LY Sbjct: 565 LMLEKARVLTDAVAREDFKMIVEGFSRASNLAAK-----GGSELQVNRDLLEVWAERELY 619 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A I + + + + + I FFD VLV +D R NRL+LL+ Sbjct: 620 ASIRSASEDFSAAEKRQDAEGMFAAIAKLAPAIHRFFDDVLVMAEDETTRTNRLALLRET 679 Query: 689 KNIILIVINVQKIV 702 + KIV Sbjct: 680 DRLTKRFAAFNKIV 693 >gi|257884091|ref|ZP_05663744.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257819929|gb|EEV47077.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,501] Length = 694 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 211/733 (28%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 121 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 122 KYTHGKESKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G +++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDYEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 338 ---------KASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 507 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 624 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|149191882|ref|ZP_01870116.1| glycyl-tRNA synthetase subunit beta [Vibrio shilonii AK1] gi|148834274|gb|EDL51277.1| glycyl-tRNA synthetase subunit beta [Vibrio shilonii AK1] Length = 688 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 197/703 (28%), Positives = 331/703 (47%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK+ + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFESELKDADLAHEGVKWYAAPRRLALKVSAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEGQADKVVEKRGPAVSVAFDADGNATKAAQGWARGNGITVDQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQATSEIIVELAAKALANLPIAKPMRWGDKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF ++S + Y LE V+ D + R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYDARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 SQKAAAAVGGVADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN + L+ I Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYSLDLTDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++++ F R + D D+I+A+L +K Sbjct: 505 AKSLFGDKLTNANVEEDVLEFMLGRFNAWYKDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 VSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKVLAENVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|158521723|ref|YP_001529593.1| glycyl-tRNA synthetase, beta subunit [Desulfococcus oleovorans Hxd3] gi|158510549|gb|ABW67516.1| glycyl-tRNA synthetase, beta subunit [Desulfococcus oleovorans Hxd3] Length = 702 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 202/731 (27%), Positives = 337/731 (46%), Gaps = 67/731 (9%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L EI +EE+PA A L+ L+ L E V R + TP RL + ++ Sbjct: 1 MKNDTLLFEIGTEELPAGYIEPALAALANTLVRKLTEARVACGTARTFGTPRRLAVIIED 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ E GP G A F G+ + ++ +KG+ A Sbjct: 61 VAGKQETVTTELTGPPRSVGMDENGRFTLAAKKFAEKAGVALKAVKVVR--TEKGEYLAA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + L +LKT++P I +P+PK+M+W+ + + RP+ S+ +L Sbjct: 119 RKVEKGVLTSRILKTVLPQVITSLPFPKTMKWADRNET-----FARPVHSLTVLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + ++ L I GH F P P+ + D Y+ + VL+D R+ A+ + Sbjct: 169 GKSVVRLSWAGISSNRNCMGHSFMHPAPVSISHPDAYVEQMRRHFVLVDTAERKAAVRRE 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A A+G EL+ D++L++ + LVE+ G FD+K+L LP+E++ +++++QK F Sbjct: 229 IGQAAIALGGELLPDEELVDVVTNLVEYPVASAGRFDEKFLALPKEVLITSMRSHQKYFA 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++ L CF+ V+N + SD + G+ RV+ ARLEDA+ F+++D Sbjct: 289 VTDKKKNLMPCFVAVNNTKVSD-IDVVTTGHQRVLRARLEDAMFFYQKD----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID----AD 407 L PLDQR+ L VVF A++GT E+ RI LG +A D A Sbjct: 337 ---------LQAPLDQRVPDL--ARVVFQARLGTLLEKTQRIEQLGLMLAGQADPGNTAT 385 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 V RA L KADL T V EFP+LQG +G+ +A E + AIEEH +P + Sbjct: 386 GQTVVRAATLCKADLVTHTVIEFPKLQGVMGRVFARASGEPEAVARAIEEHYQPLYAGAD 445 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + +++ADK+D++ +A+ PSG+ DPYALRR +G+I+I+L + I LS+ Sbjct: 446 LPESLAGALLAVADKIDSICGCFAVGLVPSGASDPYALRRQGIGLIQILLSHNIGASLSR 505 Query: 528 FIED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 I+ + LF R+ L D + D+ A+L D++ Sbjct: 506 IIQAAMAPFASVSTEPVQAAADGVSLFLRGRMAQMLVDDGVPRDVATAVLNASADHVPDA 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L E + KR+ I+ + K EI+ E++ AE L Sbjct: 566 WKRSRALAAVKPLPDFEPIAAAFKRVANIIKKADPK--EIAGEVNSDLFEAPAESTLLDA 623 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +++ + Y + + + ++ FFD+VLV D R NRL+LL + + Sbjct: 624 CQAVKIKMDDALARQDYSRALTEIADLRSVVDTFFDEVLVMAKDSGRRRNRLALLSRVNS 683 Query: 691 IILIVINVQKI 701 + + + Sbjct: 684 LFKGFADFSAL 694 >gi|257882783|ref|ZP_05662436.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257818441|gb|EEV45769.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,502] Length = 694 Score = 561 bits (1447), Expect = e-157, Method: Composition-based stats. Identities = 210/733 (28%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T D ++ K + Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTT--DAITFRELKGVEYVYVT 121 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 122 KYTHGKESKEVLTG-LADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G +++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDYEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDK----------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V +H KIG+ E++ R++V+ + I + + ++ Sbjct: 338 ---------KASIDQYVEKLKT--VTYHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 507 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 624 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|327535692|gb|AEA94526.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis OG1RF] Length = 694 Score = 561 bits (1447), Expect = e-157, Method: Composition-based stats. Identities = 201/733 (27%), Positives = 351/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L DK+LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDKELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFDV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|46580306|ref|YP_011114.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio vulgaris str. Hildenborough] gi|81830422|sp|Q72AU3|SYGB_DESVH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|46449723|gb|AAS96373.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio vulgaris str. Hildenborough] gi|311233711|gb|ADP86565.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio vulgaris RCH1] Length = 696 Score = 561 bits (1447), Expect = e-157, Method: Composition-based stats. Identities = 207/729 (28%), Positives = 326/729 (44%), Gaps = 63/729 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI +EE+PAR +L+ L + G+ +R TP R + + ++ Sbjct: 1 MSQFVLEIGTEELPARFLPALERELAERFTRALADAGIECDPVRVMSTPRRAVVRMDAVN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E E GP G KA +GF R+ G++ + KG+ Sbjct: 61 PVQSESEEVVTGPPARIAFTPEGGLTKAAEGFARTQGVEVAD--IFRLTTDKGEYIAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 D+L+ I P I +P+PK MRW + F++ RP++ +L + E Sbjct: 119 HMGGARSIDLLRDICPAIIGALPFPKRMRWGSGD-----FTYARPMRWLLALF-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDA 232 ++D ++ + GNITYGHR H P+ V Y R + + V E RRNA++ Sbjct: 169 SVVDFEVGGVRSGNITYGHRIHGAGPLTVARAGDYERVIREQGGVTPVGEERRNAVVKGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA A G +++ LL+E+ GLVE +G+ D +L LP E++ +++++QK F Sbjct: 229 NALAVAAGGKVIWKDSLLDEVQGLVEHPVPCLGNIDPSFLELPREVLLTSMESHQKSFGV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L F+ V N+ D G + +G RV+ ARLEDA FWK D Sbjct: 289 EDAEGRLMPHFLTVLNLTPLD-GDLVRKGWERVLRARLEDARFFWKTD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 L+ D +A LD +V+F +G+ G++ R+ L +A + D Sbjct: 336 --------LASSFDAWLASLD--NVIFLGPLGSMGDKTRRLEQLCAWLAAEVGFDDATAA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSK DL + +V EF LQG +G YA E + AI E P GP VP++ Sbjct: 386 ARAGRLSKGDLVSGMVGEFDTLQGIMGGIYARRMGEAEAVAAAIAEQYLPAGPDSPVPSS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S+ADK DTL + + P+G+ DPYALRR LGI RIILE+ + + + Sbjct: 446 MCGALLSIADKADTLAGCFGLGMIPTGAADPYALRRCVLGIARIILEHGLQLDVRGLFAK 505 Query: 532 Q------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L FF RL+ L+EA+L D++ + Sbjct: 506 AFALYGERAWKLAPEDALVKLDEFFMARLRNLFIANGYETLLVEAVLAAGCDDVRSAGAR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK-NREISLEISPQYLLLEAEKRLYAVIS 632 ++ L F +L+ KR I+ + + + L+ +AE++L A + Sbjct: 566 LEALAAFSRRDDFASAVLTFKRAANIIRKQGGDSDVALDGAWKADLLVEDAERQLAASLE 625 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 Y + LL + ++ FF+ V+V DD +R NRL+LLQ + + Sbjct: 626 AMFPRFDGLWAEGDYPALFGLLGELRPVVDGFFEGVMVMSDDAALRTNRLNLLQALVGRL 685 Query: 693 LIVINVQKI 701 + + + Sbjct: 686 SRLADFGAL 694 >gi|261365485|ref|ZP_05978368.1| glycyl-tRNA synthetase, beta subunit [Neisseria mucosa ATCC 25996] gi|288566017|gb|EFC87577.1| glycyl-tRNA synthetase, beta subunit [Neisseria mucosa ATCC 25996] Length = 687 Score = 561 bits (1447), Expect = e-157, Method: Composition-based stats. Identities = 215/710 (30%), Positives = 348/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLIDGEAEFTAYASPRRLAVQIKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGVPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+D+ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVL-----HGDDIVDVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALSEQAGRLKATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +R L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERTARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTTFDSFPKGLLNEKTL 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVADGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|24371614|ref|NP_715656.1| glycyl-tRNA synthetase subunit beta [Shewanella oneidensis MR-1] gi|81845949|sp|Q8EKS6|SYGB_SHEON RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|24345367|gb|AAN53101.1|AE015453_3 glycyl-tRNA synthetase, beta subunit [Shewanella oneidensis MR-1] Length = 688 Score = 561 bits (1447), Expect = e-157, Method: Composition-based stats. Identities = 205/695 (29%), Positives = 329/695 (47%), Gaps = 62/695 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + +++ Y P RL L + L+ Sbjct: 5 NLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAVWYAAPRRLALNITELAIA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKIVEKRGPAVSSAFDAGGKPTKAAEGWARGNGITVDQAERLVTD--KGEWLVYNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW ++ + +IRP+ + +L +E + Sbjct: 123 EGVETKSLVAAMAQRALDKLPIPKPMRWGSSKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ D+Y+ L+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARNIRGHRFMGTG-FELDHADNYLTLLKEKGKVIADYESRKALIKADAEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 232 AAAKIGGTADIEDALLEEVTSLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ Sbjct: 292 DAGKLLPNFIFVANIESKD-PAQIISGNEKVVRPRLADAEFFFNTDK------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 338 -------KHTLESRLPSLET--VLFQQQLGTLKDKVTRISALAAFIAEQTGANAVDAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VPT +S Sbjct: 389 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVALAMEEQYKPKFSGDTVPTAAVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L Sbjct: 449 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 508 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D+ I D+I A+L I ++ Sbjct: 509 LHGANLSNANASEEVLEFLMARFRAWYQDKGINVDVILAVLARRPTRPADFDSRINAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + KR+ ILA K E+ ++ L AE+ L A +++ + Sbjct: 569 FRGLEASSALAAANKRVSNILA---KVEGELPSSVNVALLSEAAEQALAAKLAELQPQLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 + Y Q LL S+ E ++ FF+ V+V DD Sbjct: 626 PLFANADYQQALTLLASLRESVDQFFEDVMVMADD 660 >gi|262375083|ref|ZP_06068317.1| glycyl-tRNA synthetase beta subunit [Acinetobacter lwoffii SH145] gi|262310096|gb|EEY91225.1| glycyl-tRNA synthetase beta subunit [Acinetobacter lwoffii SH145] Length = 689 Score = 561 bits (1447), Expect = e-157, Method: Composition-based stats. Identities = 197/724 (27%), Positives = 342/724 (47%), Gaps = 64/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L E+ EE+P + K + L + LK+ G+ + ++ Y P RL L + Sbjct: 1 MSKHTVLFELGCEELPPKSLKKLRDALHAETVKGLKDAGLAFDSIEAYAAPRRLALKIVN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + + GP G KA++GF+R G+ + K + Sbjct: 61 VDAAQADTQKRFDGPAKQAAFDAEGNPTKALEGFMRGQGITVDQVSTFQ--AGKVEKVCY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + Sbjct: 119 LKDVKGQSLDVLLPQILQNALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----K 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++D +++ GN+T+GHRFHAP I + D Y+ L+ A V+ E R+ I Sbjct: 169 DNDVVDATIQDHKAGNVTFGHRFHAPEAITLAHADEYLAKLKAAHVVASFEERQATIDQQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA V + DL +E+ LVEW SF++++L +P+E + T++ NQK F Sbjct: 229 VKALADEVNAIAIVPADLRDEVTALVEWPVALRASFEERFLAVPQEALITTMQDNQKYFC 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 LVNADNKLQPYFITVSNIESKD-PTQIIEGNEKVVRPRLSDAEFFFLQDQ---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R +L ++VF A++GT + RI L +A + A Sbjct: 338 ----------KQPLASRKEKL--ANMVFQAELGTLWNKSERIAKLAVALAPITGAKAEDA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 ++A +L+K DL +E+V EFPELQG G YA L+ EN +++ E P+ + +P Sbjct: 386 EKAALLAKCDLTSELVGEFPELQGIAGTYYARLEGENAEVAESLGEQYLPKFAGDVLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 K T++LAD+LDTL + I + P+GSKDP+ALRR+ +GI+R++ EN++D+ + I+ Sbjct: 446 KTGTTIALADRLDTLTGIFGIGQAPTGSKDPFALRRSAIGILRLVTENELDVSIEDLIKL 505 Query: 531 ---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F R + D+ + D+I+A+ + L + Sbjct: 506 ALAAYGDVLKDHDKTLADAVAFLEGRYRAKYEDQGVAVDVIQAVQALSPKSPLDFDKRVN 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N F + + + KR+ ILA E + L+ +AEK L+A ++ Sbjct: 566 AVNHFRALPEAAALAAANKRVANILAKEAAPE----GSVVEANLVEDAEKALFAELAKIA 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ K Y L ++ P++ FFD V+V DD +++ NRL +L ++ + V Sbjct: 622 PQVEPLFAAKDYTAALSALAALRAPVDAFFDGVMVMADDADLKANRLRMLAQLRELFTKV 681 Query: 696 INVQ 699 ++ Sbjct: 682 ADIS 685 >gi|238897822|ref|YP_002923501.1| glycine tRNA synthetase, beta subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259511926|sp|C4K460|SYGB_HAMD5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229465579|gb|ACQ67353.1| glycine tRNA synthetase, beta subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 689 Score = 561 bits (1446), Expect = e-157, Method: Composition-based stats. Identities = 199/720 (27%), Positives = 326/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + E + L L + + + + + TP RL + + LS Sbjct: 5 TFLVEIGTEELPPKSLRSLVESFAFYLTQELNKAHLDHGEVTWFATPRRLAVKVACLSTI 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA + RS G+ + D KG+ L Sbjct: 65 QKDQKIEKRGPAIAQAYDVDGNPTKAATAWARSCGISLDQAKSLVTD--KGEWLLYSWVL 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + +L V +A+ ++P K M W + ++RP+ ++ +L +++ Sbjct: 123 PGKSASSLLAEKVKIALSQLPISKLMSWGIHEA-----KFVRPVHTVTLLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + + GHRF ++ D Y + LE+ V+ D R+ I D + Sbjct: 173 ISGIIFGVNSNRKILGHRFMGEPSFIIEHADQYPQILLEKGKVMADFFLRKTQIKTDIEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G +LLEE+ LVEW V F+KK+L +P E + T+K +QK F Sbjct: 233 AAEKIGAIADISDNLLEEVTSLVEWPVVHTAQFEKKFLEVPSEALVHTMKNDQKYFPVYN 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI + D + GN +V+ R DA F++ D Sbjct: 293 KSGQLMPYFIFVANILSQDPPQL-IFGNEKVIRPRFADAQFFFETD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L++R+ L ++F ++GT E+V R++ L IA I A+V +A Sbjct: 338 ------LKQSLEERLPSLKT--ILFQKELGTLYEKVQRVQALSGWIASQIGANVEYSIKA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EFPE QG +G YA +E AI E +PR +N+P+ ++ Sbjct: 390 GLLSKSDLMTNMVCEFPETQGIMGMHYARYHHEPDEVARAIYEQYQPRFSGDNLPSTLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V++ADK+DTL + IN+ P G KDP+ LRRA LG++RII+E + + L I + Sbjct: 450 CSVAIADKMDTLTGIFGINQLPKGDKDPFGLRRAALGVLRIIVEKNLPLDLQTLISEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + + D I+A+L I+ + Sbjct: 510 LYGNKLKNSNLIDQIIEFMLGRFRSWYQEAGHGIDSIQAVLARRPTKPADFNARIQAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + S KR+ IL+ I L AE L I + + Sbjct: 570 FRTMNEARALCASNKRVSNILSQSL---DIPKNSIDTGLLKEPAEIELAQNILELEKKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y L ++ EP++IFF QV+V V D+++R NRL+LL ++ + L V ++ Sbjct: 627 PFFVAGLYKDALLELVALREPLDIFFKQVMVMVPDQDLRLNRLALLNKLRALFLRVADIS 686 >gi|323493788|ref|ZP_08098906.1| glycyl-tRNA synthetase subunit beta [Vibrio brasiliensis LMG 20546] gi|323311922|gb|EGA65068.1| glycyl-tRNA synthetase subunit beta [Vibrio brasiliensis LMG 20546] Length = 688 Score = 561 bits (1446), Expect = e-157, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 349/725 (48%), Gaps = 63/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK+ + +Q ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKDADLAHQGVKWYAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++K D KG+ L Sbjct: 61 AEGQADKVVEKRGPAVSVAFDAEGNATKAAQGWARGNGITVEQAERLKTD--KGEWLLCK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQATSEIVVDLAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF ++S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 SQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKE-PRHVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITALSGYIAKQIDADVEKA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ Sbjct: 386 TRAGLLAKCDLMTSMVFEFTDTQGVMGMHYANHDGEDEQVALALYEQYMPRFAGDDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L I + Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLVDLIRE 504 Query: 532 Q---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++I F R + + D D+I+A+L +K Sbjct: 505 AKVQFGTKLTNENVEADVIDFMLGRFRAWYQDAGFSIDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L ++ Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELAAEIDLSLLQEDAEKALAESVTVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKTNRLTLLNNLRNLFLQIA 681 Query: 697 NVQKI 701 ++ + Sbjct: 682 DISLL 686 >gi|300692465|ref|YP_003753460.1| glycine tRNA synthetase, beta subunit [Ralstonia solanacearum PSI07] gi|299079525|emb|CBJ52203.1| glycine tRNA synthetase, beta subunit [Ralstonia solanacearum PSI07] Length = 719 Score = 561 bits (1446), Expect = e-157, Method: Composition-based stats. Identities = 210/718 (29%), Positives = 350/718 (48%), Gaps = 66/718 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G+ +P++ E+ Sbjct: 36 PPKALARLGETFAQSLFDGLSAQGLLEEGAQVEGFATPRRLAASIAGVRRAAPDRELREK 95 Query: 71 LGP------RVGAG----KKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRL 119 + P G K + +S G+ I+ +++ P K + + Sbjct: 96 VLPVNIAFDADGKPAAPLTKKLAALAKSIGVDAIAPESLERAPDGKAESLFYRYTARGAV 155 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L+ + I +P PK M + + + ++RP + +L +++I Sbjct: 156 LADGLQAALSQTIAGLPIPKVMTYQRPNG--DSVQFVRPAHRLTALL-----DDEVIPAS 208 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASA 238 + + GN+T GHRF + I + Y L+ V+ R+ AI + + A A Sbjct: 209 VLGLQSGNVTLGHRFLSAGEIVIPHATAYAGTLQSQGKVIASYAERKEAIRAELQKAAGA 268 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +V + LL+E+ LVEW V+ FD+ +L +P+E + LT++TNQK F +G Sbjct: 269 D--TVVMPEALLDEVNSLVEWPVVYPCHFDEPFLAVPQECLILTMQTNQKYFALTDAQGH 326 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSNI A+ AI++GN RVV RL DA F++ D+ Sbjct: 327 LRNRFLIVSNI-ATGTPGAIIEGNERVVRPRLADARFFFEHDK----------------- 368 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 KPL R+ +L VV+H KIGTQ ERVSR++ + ++A+ + ADVA RA +L+ Sbjct: 369 ---KKPLADRVPQLSR--VVYHNKIGTQLERVSRLQAIAGQLAEKLGADVAHASRAALLA 423 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P+ V+ Sbjct: 424 KADLLTDMVGEFPELQGTMGTYYARHDGEPEDVALACSEHYQPRFAGDALPSTATGTVVA 483 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 LADKL+TL+ W I P+G KDP+ALRR LGI+R+++E + + +++ +E Sbjct: 484 LADKLETLVGIWGIGLAPTGEKDPFALRRHALGILRMLIEKPLALGVAEVLEVAAASFEG 543 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + F +DRL+ YL D+ + +EA++ L IV ++ + F + Sbjct: 544 IAAVKPDLAAITDFLYDRLRGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAAL 603 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KRI IL KK + PQ L +AE+ L+ ++ H+ ++ Sbjct: 604 PQAEALAAANKRITNIL----KKTDIAIGAVQPQLLREDAERALHQAVATSEPHVHDAFA 659 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L + E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 660 RGDFTTALKTLAGLREAVDSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKL 717 >gi|255019756|ref|ZP_05291833.1| Glycyl-tRNA synthetase beta chain [Acidithiobacillus caldus ATCC 51756] gi|254970824|gb|EET28309.1| Glycyl-tRNA synthetase beta chain [Acidithiobacillus caldus ATCC 51756] Length = 695 Score = 561 bits (1446), Expect = e-157, Method: Composition-based stats. Identities = 210/725 (28%), Positives = 328/725 (45%), Gaps = 65/725 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA+ Q + + I GLL E G+ + + + P RL L ++ L+ Sbjct: 6 DLLLEIGCEELPAQEQPRLLQAAPEIFQGLLDEAGIAFGVVHGFVGPRRLALLVEDLALE 65 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E R GP G A GF RS G+ + ++ D KG V + Sbjct: 66 TQAREEWRRGPSLDRAFTADGQPSAAALGFARSCGVAPDALEELATD--KGPVLAFRVVT 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + +L I +Q +P K MRW + RP++ ++ L + ++ Sbjct: 124 PAQSSARLLPGIAQRWLQTLPLRKRMRWGERDD-----RFSRPVRWLVLRLGS-----QV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHR H P + + L Y L EA V D RR IL + L Sbjct: 174 LPWQSFGLEAGAASRGHRVHHPEAVPLPVLRDYPTLLREAKVRADWHERRQHILRELSCL 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + + D L +EI GL EW GSFD YL +PE ++R + +Q+ R Sbjct: 234 AEKLGAQALLDDALADEITGLNEWPVALAGSFDPDYLRVPEAVLRTVMVQHQRYVPLRGG 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G LA ++ ++NI + D +V+GN RV+ ARL DA FW +D+ Sbjct: 294 DGRLAPHYLFIANIASRD-PQVVVRGNDRVLRARLADAAFFWDQDRR------------- 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 + L R+ LD ++F +G+ E+ R+ L + +A D A Sbjct: 340 -------RSLASRLPELD--ALLFQDGLGSMAEKSHRLEALARSLAVAFGLDPRAAAHAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L KADL T +V EFPELQG +G YA E+ + AI E +P G + +P + + Sbjct: 391 RLCKADLLTGMVGEFPELQGIMGGHYARHDGEDEAIATAIAEQYRPAGRDDPLPESPLGR 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 ++LADK DTL F+AI + PSG +DP+ LRRA LGI+RI LE + L Q + Sbjct: 451 ILALADKADTLWGFFAIGQIPSGDRDPFGLRRAALGILRIALEGS-GLSLRQLLRAAADG 509 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ F +RL++ L D D I+A+L D+ + ++ L Sbjct: 510 YGASLHLADPEAVTESAWAFVQERLRVLLRDEGFAADQIQAVLAVAGDDPIAARRRLESL 569 Query: 578 NEFFSS-AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 EF + KRI +L E+ + + +P L AE L+ S Sbjct: 570 AEFLRLHESADALAALIKRINNLLRKEDLGSLP---QCNPDRLQEPAEIALWREYSALQE 626 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + DLL + ++ FF ++LV +D +R NRL+LL I+ L + Sbjct: 627 ALIPLLAAGDFAASLDLLAGLRSAVDRFFQEILVLCEDARLRANRLALLAQIQKSFLQIA 686 Query: 697 NVQKI 701 + + Sbjct: 687 DFSLL 691 >gi|313201807|ref|YP_004040465.1| glycyl-tRNA synthetase subunit beta [Methylovorus sp. MP688] gi|312441123|gb|ADQ85229.1| glycyl-tRNA synthetase, beta subunit [Methylovorus sp. MP688] Length = 701 Score = 561 bits (1446), Expect = e-157, Method: Composition-based stats. Identities = 203/728 (27%), Positives = 346/728 (47%), Gaps = 61/728 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + +K E S L+ +LK +G+ + + Y +P RL ++ + Sbjct: 4 NLLVELFVEELPPKALNKLGEAFSSTLLEVLKSQGLTSETSQVTAYASPRRLAAHISDVV 63 Query: 61 PHSPEKI-EERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAV 112 + +K +L P G A+ L + G + Q+K++ K D+ Sbjct: 64 AKAADKSLSHKLMPATVGLDANGKATPALLKKLTALGADESAVSQLKREHDGKADILFLE 123 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + L+ + A+ K+P PK M + ++ +++RP ++ + Sbjct: 124 GTAAGATLSEGLQKALDEALAKLPIPKVMTYQLQDG-WTSVNFVRPAHGLVAL-----HG 177 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 ++I + + GN T GHRF A P+ ++ DHY L V+ RR I+ Sbjct: 178 NEVIPVSALGLQSGNTTQGHRFEAKVSPVTLRHADHYAEQLHTEGAVIASFAERRAEIVR 237 Query: 231 DAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A+ G L ++D+ LL+E+ LVE V +G F+ ++L +P+E + LT+K NQK Sbjct: 238 QLTAAAAKAGPQLTPIQDEALLDEVTALVERPNVLLGQFEDEFLQVPQECLILTMKANQK 297 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F + +G L+N F++VSNI D +A++ GN RVV RL DA F+ +D+ Sbjct: 298 YFPLLSADGQLSNKFLIVSNISPDDA-SAVIGGNERVVRPRLADAKFFFDQDR------- 349 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 K L+ R+ LD VV+H K+G+QG+R +R+ + I Q + D Sbjct: 350 -------------KKTLESRLTSLD--KVVYHNKLGSQGQRTTRVASIASAIGQQLGGDA 394 Query: 409 ALVDRAIVLSKA--DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A A DL T++V EFPELQG +G+ YA + + AIE+H KPR + Sbjct: 395 LASKAAQAARLAKADLVTDMVGEFPELQGIMGRYYAQHEGLDNDVAYAIEDHYKPRFAGD 454 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID---- 522 +P N++ + V+LADKL+TL + I + PSG KDP+ALRR LG++R+++EN + Sbjct: 455 ELPRNQVGVVVALADKLETLCGMFGIGQIPSGDKDPFALRRHALGVVRLLIENSLPLTLD 514 Query: 523 ---------IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L F +DRL L ++ ++A+L E L I Sbjct: 515 TLLNTTFGCFAADVENASTALRSFIYDRLSGSLREQGYSAQEVDAVLALEPQQLADIAKR 574 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + F + + E + KR+ IL E ++ I+ L+ AE L ++ Sbjct: 575 LEAVKAFAALPEAESLAAANKRVGNILKKAE---GDVQASINQALLVEPAELALAQALAS 631 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y L ++ P++ FFD V+VN +D ++ NRL LL + + Sbjct: 632 VTPQADAAFAAGDYRSSLQALAALRTPVDAFFDGVMVNAEDPALKANRLGLLASLHQAMN 691 Query: 694 IVINVQKI 701 V ++ ++ Sbjct: 692 RVADLSRL 699 >gi|304385064|ref|ZP_07367410.1| glycyl-tRNA synthetase beta subunit [Pediococcus acidilactici DSM 20284] gi|304329258|gb|EFL96478.1| glycyl-tRNA synthetase beta subunit [Pediococcus acidilactici DSM 20284] Length = 690 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 207/734 (28%), Positives = 354/734 (48%), Gaps = 78/734 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +LLEI EEIPA + + + L+ + LKE + Y ++ Q+ TP RL + + GL Sbjct: 1 MAHSYLLEIGLEEIPAHVVTPSIQQLAQKVAKFLKENRLSYDSIEQFSTPRRLAIRINGL 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 P+ E+ GP G KA GF + GL I KG Y+ V Sbjct: 61 GDRQPDIEEDAKGPARKIAQDADGNWTKAAIGFTKGQGLTVDD---ITFKTIKGTEYVYV 117 Query: 113 LR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +++L + ++ + +P M+W+ F ++RP++ ++ IL Sbjct: 118 HKLIQGKTTQEILPG-IKDVVESLNFPTMMKWANYD-----FKFVRPIRWLVSIL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ + +I G + GHRF + + + Y L+ V++D E R+ I Sbjct: 167 DDEVLPFQILDIKAGRQSQGHRFLG-KAVDLANPSEYEEKLQAEFVIVDAEKRKALIREQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A E+ + DLLEE+ LVEW F G FD KYL +PEE++ +++ +Q+ F Sbjct: 226 IQAIAQEENWEVTPNADLLEEVNNLVEWPTAFSGKFDPKYLAIPEEVLITSMRDHQRFFF 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R ++G L FI V N + +++GN +V+ ARLEDA F+ DQ N Sbjct: 286 VRNQDGKLLPNFISVRNG-NKEHLENVIRGNEKVLTARLEDAAFFYDEDQKN-------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +D + RL V FH KIGT E+++R+ + + IA+++ D Sbjct: 337 ------------SIDYYVDRLK--KVSFHDKIGTMAEKMTRVGSIAQVIAKMLGLDAETA 382 Query: 412 D---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 383 EDLQRAAAIYKFDLVTGMVGEFPELQGVMGEKYALLKGEKPAVAQAIREHYMPNSAEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + ++LADK D + +F++ PSGS DPYALRR GI+RI+ + + L++F Sbjct: 443 PESTVGAVLALADKFDNIFSFFSAGMIPSGSNDPYALRRHAYGIVRILAQRDWSLDLNKF 502 Query: 529 IE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E ++ FF+DR+K YL + + +D+ +A+L N+ Sbjct: 503 EEAVKQALADDQTSFGVDVDKNFAEVVEFFNDRIKQYLDHQSVSYDIEDAVLAGSQHNVT 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 TI+ + L ++ + + + R+ +I K L + PQ E E +L+ Sbjct: 563 TIIAAAEVLTNAKAADSFKDEIEALTRVQRI---ATKNTTAGDLAVDPQLFNNETEGKLF 619 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +I+ E+M+ L S+ I +FD +V D +++ NRL+++ + Sbjct: 620 DLITKI-----EAMNDSDMAAFFKELTSLTPAITEYFDATMVMDKDAKIKANRLNMMSRL 674 Query: 689 KNIILIVINVQKIV 702 N++L V ++ K++ Sbjct: 675 ANLVLRVGDLTKVM 688 >gi|120602312|ref|YP_966712.1| glycine--tRNA ligase [Desulfovibrio vulgaris DP4] gi|226737049|sp|A1VCW9|SYGB_DESVV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120562541|gb|ABM28285.1| glycyl-tRNA synthetase beta chain [Desulfovibrio vulgaris DP4] Length = 696 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 206/729 (28%), Positives = 325/729 (44%), Gaps = 63/729 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI +EE+PAR +L+ L + G+ + TP R + + ++ Sbjct: 1 MSQFVLEIGTEELPARFLPALERELAERFTRALADAGIECDPVCVMSTPRRAVVRMDAVN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E E GP G KA +GF R+ G++ + KG+ Sbjct: 61 PVQSESEEVVTGPPARIAFTPEGGLTKAAEGFARTQGVEVAD--IFRLTTDKGEYIAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 D+L+ I P I +P+PK MRW + F++ RP++ +L + E Sbjct: 119 HMGGARSIDLLRDICPAIIGALPFPKRMRWGSGD-----FTYARPMRWLLALF-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDA 232 ++D ++ + GNITYGHR H P+ V Y R + + V E RRNA++ Sbjct: 169 SVVDFEVGGVRSGNITYGHRIHGAGPLTVAHAGDYERVIREQGGVTPVGEERRNAVVTGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+A G +++ LL+E+ GLVE +G+ D +L LP E++ +++++QK F Sbjct: 229 NTLATAAGGKVIWKDSLLDEVQGLVEHPVPCLGNIDPSFLELPREVLLTSMESHQKSFGV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L F+ V N+ D G + +G RV+ ARLEDA FWK D Sbjct: 289 EDAEGRLMPHFLTVLNLTPLD-GDLVRKGWERVLRARLEDARFFWKTD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 L+ D +A LD +V+F +G+ G++ R+ L +A + D Sbjct: 336 --------LASSFDAWLASLD--NVIFLGPLGSMGDKTRRLEQLCAWLASEVGFDDATAA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSK DL + +V EF LQG +G YA E + AI E P GP VP++ Sbjct: 386 ARAGRLSKGDLVSGMVGEFDTLQGIMGGIYARRMGEAEAVAAAIAEQYLPAGPDSPVPSS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S+ADK DTL + + P+G+ DPYALRR LGI RIILE+ + + + Sbjct: 446 MCGALLSIADKADTLAGCFGLGMIPTGAADPYALRRCVLGIARIILEHGLQLDVRGLFAK 505 Query: 532 Q------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L FF RL+ L+EA+L D++ + Sbjct: 506 AFALYGERAWKLAPEDALVKLDEFFMARLRNLFIANGYETLLVEAVLAAGCDDVRSAGAR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK-NREISLEISPQYLLLEAEKRLYAVIS 632 ++ L F +L+ KR I+ + + + L+ +AE+ L A + Sbjct: 566 LEALAAFSRRDDFASAVLTFKRAANIIRKQGGDSDVALDGAWKADLLVEDAERHLAASLE 625 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 Y + LL + ++ FF+ V+V DD +R NRL+LLQ + + Sbjct: 626 AMFPRFDGLWAEGDYPALFGLLGELRPVVDGFFEGVMVMSDDAALRTNRLNLLQALVGRL 685 Query: 693 LIVINVQKI 701 + + + Sbjct: 686 SRLADFGAL 694 >gi|325295561|ref|YP_004282075.1| Glycyl-tRNA synthetase beta subunit [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066009|gb|ADY74016.1| Glycyl-tRNA synthetase beta subunit [Desulfurobacterium thermolithotrophum DSM 11699] Length = 690 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 232/727 (31%), Positives = 372/727 (51%), Gaps = 71/727 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI EE+PA A + L L L++ + + + TP RL L + Sbjct: 5 NLLLEIGCEELPASFIKPALDFLKTELSKRLEDAFLKPSEIETFGTPRRLILLAYDIPEV 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLR 114 P++ E +GP V G KA GF RS G+ ++ KKG+ Sbjct: 65 QPDREELLVGPSVKAAFDSEGNPTKAAIGFARSKGVAVEELIKVSNPLGKKGEYVAIKKL 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +++L I+P I +P+ KSMRW + + RP++ IL + E Sbjct: 125 VKGKPAKEILALILPQLILSIPFKKSMRWGSKK-----VRFGRPIRWILAVYGRE----- 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ ++ I NI+YGHRF P+ +V++++ +I LEE V+ D E R++ IL+ + Sbjct: 175 IVTFEVDGIKSSNISYGHRFLTPNGFEVENVNEFINGLEEKFVVADIEKRKSIILDVSET 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA VG EL++D+DLLEE+ LVE+ +GSFDK++L LP+E+ + +K +QK F Sbjct: 235 LAKKVGGELLKDEDLLEEVTNLVEYPYPILGSFDKEFLNLPKEVPIVVMKDHQKFFSVVD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L N FI +SNI+ +D + I +G +V+ ARL+DAL F+ D+ Sbjct: 295 NDGNLKNYFIGISNIKPADE-SVIRKGYEKVLRARLKDALFFFNEDR------------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVD 412 K L++R+ +L+ +VFH K+GT ++ R+ +L +A+ V+ Sbjct: 341 -------KKTLEERVPQLN--GIVFHEKLGTMFDKTKRLELLAPFVAESTGKGRVKEKVE 391 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +LSKADL TE+V EFPELQG +GK YA+L E+ S AIEE PR + V + Sbjct: 392 RAALLSKADLLTEMVNEFPELQGTMGKYYALLDGEDESVATAIEEQYFPRFSGDVVARGE 451 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 + I++SL++K+D LI F+ + +P+GS DPY+LRR +G+I+ ILEN+I + L + Sbjct: 452 VGISLSLSEKIDNLIGFFGVGIRPTGSADPYSLRRNAIGLIQTILENRIHLNLLPVFQKA 511 Query: 531 ---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 Q ++ F +R K+ L +R + D IEAIL D+L + I+ Sbjct: 512 KEIYEDLGLKLSESAPQEVLEFVKERFKVLLRERGFKIDTIEAILSI-TDDLYDALLRIE 570 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIE-EKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + S + E L++ +R+ I+ E + E + E LY Sbjct: 571 AIETLRKSEEFENVLVTLRRVVNIIPKGFEAVDFEPEGK---------YETELYEKFLLI 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + + K Y + L+ + ++ FF+ V+V D V++ RLSLL+ I N +L Sbjct: 622 KEKLSKLISSKNYREALLLIKELKPFVDAFFENVMVMDKDENVKNRRLSLLKTIANELLS 681 Query: 695 VINVQKI 701 + + KI Sbjct: 682 IADFSKI 688 >gi|91228339|ref|ZP_01262267.1| glycyl-tRNA synthetase beta subunit [Vibrio alginolyticus 12G01] gi|91188099|gb|EAS74403.1| glycyl-tRNA synthetase beta subunit [Vibrio alginolyticus 12G01] Length = 688 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 197/703 (28%), Positives = 327/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 ADSQSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQAERMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 VSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|269965270|ref|ZP_06179391.1| glycyl-tRNA synthetase beta subunit [Vibrio alginolyticus 40B] gi|269830071|gb|EEZ84299.1| glycyl-tRNA synthetase beta subunit [Vibrio alginolyticus 40B] Length = 688 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 198/703 (28%), Positives = 327/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 ADSQSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQAERMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNENVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRELEAAESLAAANKRVGNILA---KFDGELAEEIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|255066574|ref|ZP_05318429.1| glycyl-tRNA synthetase, beta subunit [Neisseria sicca ATCC 29256] gi|255049158|gb|EET44622.1| glycyl-tRNA synthetase, beta subunit [Neisseria sicca ATCC 29256] Length = 687 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 215/710 (30%), Positives = 351/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ + Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLIDGAAEFTAYASPRRLAVQVKNVKSVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + ++ I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGSD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI + A + + Sbjct: 184 GNQTLGHRFLSSGEITIENADSYAAQMREQGKVVASFTERKAAIQTALNEQAGRLKATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTTFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E+ L + EK LYA D I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVDESLLQQDEEKALYAAAQDLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|28896795|ref|NP_796400.1| glycyl-tRNA synthetase subunit beta [Vibrio parahaemolyticus RIMD 2210633] gi|153839057|ref|ZP_01991724.1| glycyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus AQ3810] gi|260363493|ref|ZP_05776326.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus K5030] gi|260876552|ref|ZP_05888907.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AN-5034] gi|260897313|ref|ZP_05905809.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus Peru-466] gi|260901407|ref|ZP_05909802.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AQ4037] gi|32130158|sp|Q87TP8|SYGB_VIBPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28805003|dbj|BAC58284.1| glycyl-tRNA synthetase, beta chain [Vibrio parahaemolyticus RIMD 2210633] gi|149747440|gb|EDM58394.1| glycyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus AQ3810] gi|308087818|gb|EFO37513.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus Peru-466] gi|308090379|gb|EFO40074.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AN-5034] gi|308107205|gb|EFO44745.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AQ4037] gi|308113553|gb|EFO51093.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus K5030] Length = 688 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 198/703 (28%), Positives = 327/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AESQSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQADRMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASSRTIRGHRFMGEKEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRELEAAESLAAANKRVGNILA---KFDGELAEEIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|257869134|ref|ZP_05648787.1| glycyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257803298|gb|EEV32120.1| glycyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 696 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 348/733 (47%), Gaps = 76/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LLEI EE+PA + + + L L + + ++ Y TP RL +Y+ G+ Sbjct: 7 MAQNLLLEIGLEEMPAHVVTPSMKQLQQKTAEFLTAHALQFSSIEAYSTPRRLAVYVTGI 66 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R GL T D K+ + Sbjct: 67 PESQADTQEEVKGPAKKIAIDADGNWSKAAQGFVRGQGLTT--DAITFKELNGVEYVYVT 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +VL + I + +P +M W+ F +IRP+ I+ + AE Sbjct: 125 KHIQGKPALEVLTG-LKEVITSLVFPVTMHWANFD-----FEYIRPIHWIVALFGAE--- 175 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ + ++ + GHRF + ++ D Y+ +E V+ DP R+ I++ Sbjct: 176 --VVPFTVLDVVTDRKSRGHRFLG-EEVTFETADDYLSQMERQFVIADPSKRQQLIVDQI 232 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A + D+DLLEE+ LVE+ F+G FD+KYL +PEE++ ++K +Q+ F Sbjct: 233 DAIAKENNWRIDLDEDLLEEVNNLVEYPTAFVGDFDEKYLSVPEEVLVTSMKEHQRYFDV 292 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 RT EGVL FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 293 RTPEGVLLPHFISARNGDL-VKIDNVVKGNQKVLTARLEDAEFFYNEDKKL--------- 342 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-- 410 +DQ + +L V FH KIG+ E++ R+ V+ + I + ++ Sbjct: 343 -----------TIDQCVEKLKQ--VTFHEKIGSLYEKMQRVAVIAQIIGETVELSEDERT 389 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E AI EH P +P Sbjct: 390 ELKRASEIYKFDLVTNMVGEFPELQGVMGEKYALLQGETPQVAQAIREHYMPVSAEGALP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD+L++F+A+ PSGS DPYALRR T GIIRII E + PL++ Sbjct: 450 ESSVGAILAIADKLDSLLSFFAVGMIPSGSNDPYALRRQTYGIIRIIAEKRWYFPLARLQ 509 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E + +I F RL+ +L ++IRHD+IEA++ ++ Sbjct: 510 EKIRTAINEQPSVYGIQLNEGQEQVIDFVDGRLRQFLATKNIRHDVIEAVINSRQGDISL 569 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + L + + + + + R+ + + +++ +I+P+ E+E LY Sbjct: 570 LFEAAQMLRAHLNDSDFKPSMEALTRVINLAKKADLEHK----QINPELFENESENTLYE 625 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + + Y L S+ IE +FDQ +V VDD +R NR +LL I Sbjct: 626 AVVAIEDKFPQQTMEQNYQS----LVSLRPLIEAYFDQTMVMVDDEAIRRNRFALLDKIA 681 Query: 690 NIILIVINVQKIV 702 + L V ++ +V Sbjct: 682 KMSLAVASLDALV 694 >gi|254230343|ref|ZP_04923729.1| glycyl-tRNA synthetase, beta subunit [Vibrio sp. Ex25] gi|262392774|ref|YP_003284628.1| glycyl-tRNA synthetase subunit beta [Vibrio sp. Ex25] gi|151937135|gb|EDN56007.1| glycyl-tRNA synthetase, beta subunit [Vibrio sp. Ex25] gi|262336368|gb|ACY50163.1| glycyl-tRNA synthetase beta chain [Vibrio sp. Ex25] Length = 688 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 198/703 (28%), Positives = 327/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKSAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +KI E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AESQSDKIVEKRGPAVSAAFDAEGNPTKAAQGWARGCGISVDQAERMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFVDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 VSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|328471247|gb|EGF42149.1| glycyl-tRNA synthetase subunit beta [Vibrio parahaemolyticus 10329] Length = 688 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 198/703 (28%), Positives = 327/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AESQSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQADRMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASSRTIRGHRFMGEKEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDDNKKLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRELEAAESLAAANKRVGNILA---KFDGELAEEIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|120612814|ref|YP_972492.1| glycine--tRNA ligase [Acidovorax citrulli AAC00-1] gi|229470691|sp|A1TUT0|SYGB_ACIAC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120591278|gb|ABM34718.1| glycyl-tRNA synthetase beta chain [Acidovorax citrulli AAC00-1] Length = 708 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 211/733 (28%), Positives = 356/733 (48%), Gaps = 64/733 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 P+ L+E++ EE+P + K + + +L+ L+ +G+ + Y +P RL ++ + Sbjct: 4 PNLLVELFVEELPPKALQKLGDAFAGVLLAQLQAQGLASAASRVTAYASPRRLAAHVTEV 63 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLA 111 +P + +K + ++L P G A+ L + G + +++ P K + Sbjct: 64 APQAADKAVSQKLMPVTVGLDASGNATPALLKKLAALGADASAVPGLRRAPDGKAEALFL 123 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW----STTHSPISAFSWIRPLKSILCILV 167 + + L+ + ++ K+P PK MR+ ++ S++RP ++ + Sbjct: 124 DSTVRGATLSEGLQKALQESVAKLPIPKVMRYQLSSGCEQPGWTSVSFVRPAHGLVALHG 183 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRR 225 E + + + + GN T+GHRF A P+ ++S D Y + L E V+ RR Sbjct: 184 TEVL----LSVSVLGLTAGNATHGHRFEAAVDPVVIRSADTYAQQLAEEGAVIAAFADRR 239 Query: 226 NAILNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 I A VG ++D LL+E+ LVE V + F+K++L +P+E + LT+ Sbjct: 240 AEIARQLQAAAEQVGGGVRPIQDDALLDEVTALVERPNVLVCEFEKQFLDVPQECLILTM 299 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 K NQK F EG L + F++VSNI+ D +A+V GN RVV RL DA F+ +D+ Sbjct: 300 KANQKYFPLLDAEGRLTHRFLVVSNIRPDDA-SAVVGGNERVVRPRLADAKFFFDQDR-- 356 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 K L+ R+A L VV+H ++GTQGERV R+R + + IAQ Sbjct: 357 ------------------KKTLESRVASL--AKVVYHNQLGTQGERVERVRAIARAIAQQ 396 Query: 404 ID--ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 I D+A L+KADL T++V EFPELQG +G+ YA DAIE+H KP Sbjct: 397 IGDVELARQADQAAQLAKADLVTDMVGEFPELQGTMGRYYAQADGLPAEVADAIEDHYKP 456 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E ++ Sbjct: 457 RFAGDTLPRGDVGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVEKEL 516 Query: 522 DIPLSQFIE-------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + L + +L F +DRL L ++ ++A+L L Sbjct: 517 PLDLETLLHSALPAFGDKIQDPTASLADFIYDRLAGSLREQGYSAQEVDAVLALRPQRLA 576 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + F + + + KR+ IL KK ++ ++P L +AEK LY Sbjct: 577 LVGKQLAAVRAFAALPEAPALAAANKRVTNIL----KKAGDVDAHVNPDLLREQAEKDLY 632 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A + F Y L + P++ FFD V+VN ++ ++R NR LLQ + Sbjct: 633 AALQRFVPEADALFAAGDYTGSLQTLAVLRAPVDAFFDDVMVNAEELDLRLNRQGLLQSL 692 Query: 689 KNIILIVINVQKI 701 + V ++ ++ Sbjct: 693 HVAMNRVADLSRL 705 >gi|296333317|ref|ZP_06875770.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675178|ref|YP_003866850.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii str. W23] gi|296149515|gb|EFG90411.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413422|gb|ADM38541.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii str. W23] Length = 679 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 198/720 (27%), Positives = 341/720 (47%), Gaps = 61/720 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR + + L L G LKE+ + + ++ + TP RL +++K Sbjct: 1 MSKQDLLLEIGLEEMPARFLNDSMVQLGEKLTGWLKEKNITHGEVKLFNTPRRLAVFVKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G K+ K + Sbjct: 61 VAEKQDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQGADVKD--LYIKEVKGTEYVFV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +L + + + +PK+MRW +IRP+K I+ + + Sbjct: 119 QKFQAGQETKSLLPE-LSGLVTSLHFPKNMRWGNED-----LRYIRPIKWIVALYGQD-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + G T GHRF + ++ Y L+E V+ DP R+ I + Sbjct: 171 ---VIPFSITNVESGRTTQGHRFLGHE-VSIELPSAYEEQLKEQHVIADPNARKQMIQSQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 227 LEAMAAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + + G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 287 VKDKNGELLPHFITVRNG-NSHAIENVARGNEKVLRARLSDASFFYKEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 +D + +L+ ++VFH ++G+ ++V R+ + +K+A + AD Sbjct: 338 ------------NIDANVKKLE--NIVFHEELGSLADKVRRVTSIAEKLAGRLQADEDTL 383 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 V RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR Sbjct: 384 KHVKRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGET 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ V++ADKLDT+++F++I P+GS+DPY LRR GI+ I+L+ I + Sbjct: 444 PSTFTGAVVAMADKLDTIVSFFSIGVIPTGSQDPYGLRRQASGIVAILLDRNWGISFEEL 503 Query: 529 I------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 ++ L+ FF RLK L+ IRHD+I+A+L + + + L + Sbjct: 504 FTFVQTDKENELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKLG 563 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + ++ + R+ I + +I P E E +L+ ++QE+ Sbjct: 564 APGFKETAEALGRVISISKKG------VRGDIQPDLFENEYEAKLFDAYQTAKQNLQENF 617 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ ++ Sbjct: 618 SKKDYEAALASLAALKEPIDAYFDHTMVIADNETLKANRLAQMVSLADEIKSFANMNALI 677 >gi|253999833|ref|YP_003051896.1| glycyl-tRNA synthetase subunit beta [Methylovorus sp. SIP3-4] gi|253986512|gb|ACT51369.1| glycyl-tRNA synthetase, beta subunit [Methylovorus sp. SIP3-4] Length = 701 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 204/728 (28%), Positives = 349/728 (47%), Gaps = 61/728 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + +K E S L+ +LK +G+ + + Y +P RL ++ + Sbjct: 4 NLLVELFVEELPPKALNKLGEAFSSTLLEVLKSQGLTSETSQVTAYASPRRLAAHISDVV 63 Query: 61 PHSPEKI-EERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAV 112 + +K +L P G A+ L + G + Q+K++ K D+ Sbjct: 64 AKAADKSLSHKLMPATVGLDANGKATPALLKKLTALGADESAVSQLKREHDGKADILFLE 123 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + L+ + A+ K+P PK M + ++ +++RP ++ + Sbjct: 124 GTAAGATLSEGLQKALDEALAKLPIPKVMTYQLQDG-WTSVNFVRPAHGLVAL-----HG 177 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 ++I + + GN T GHRF A P+ ++ DHY L+ V+ RR I+ Sbjct: 178 NELIPVSALGLQSGNTTQGHRFEAKVSPVTLRHADHYAEQLQTEGAVIASFAERRAEIVR 237 Query: 231 DAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A+ G L ++D+ LL+E+ LVE V +G F+ ++L +P+E + LT+K NQK Sbjct: 238 QLTAAAAKAGPQLTPIQDEALLDEVTALVERPNVLLGQFEDEFLQVPQECLILTMKANQK 297 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F + +G L+N F++VSNI D +A++ GN RVV RL DA F+ +D+ Sbjct: 298 YFPLLSADGQLSNKFLIVSNISPDDA-SAVIGGNERVVRPRLADAKFFFDQDR------- 349 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 K L+ R+A LD VV+H K+G+QG+R +R+ + I Q + D Sbjct: 350 -------------KKTLESRLASLD--KVVYHNKLGSQGQRTTRVASIASAIGQQLGGDA 394 Query: 409 ALVDRAIVLSKA--DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A A DL T++V EFPELQG +G+ YA + + AIE+H KPR + Sbjct: 395 LASKAAQAARLAKADLVTDMVGEFPELQGIMGRYYAQHEGLDNDVAYAIEDHYKPRFAGD 454 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID---- 522 +P N++ + V+LADKL+TL + I + PSG KDP+ALRR LG++R+++EN + Sbjct: 455 ELPRNQVGVVVALADKLETLCGMFGIGQIPSGDKDPFALRRHALGVVRLLIENSLPLTLD 514 Query: 523 ---------IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L F +DRL L ++ ++A+L E L I Sbjct: 515 TLLNTTFGCFAADVENASTALRSFIYDRLSGSLREQGYSAQEVDAVLALEPQQLADIAKR 574 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + F + + E + KR+ IL E ++ I+ L+ AE+ L ++ Sbjct: 575 LEAVKAFAALPEAESLAAANKRVGNILKKAE---GDVQASINQALLVEPAEQALAQALAS 631 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y L ++ P++ FFD V+VN +D ++ NRL LL + + Sbjct: 632 VTPQADAAFAAGDYRSSLQALAALRTPVDAFFDGVMVNAEDPALKANRLGLLASLHQAMN 691 Query: 694 IVINVQKI 701 V ++ ++ Sbjct: 692 RVADLSRL 699 >gi|302343407|ref|YP_003807936.1| glycyl-tRNA synthetase, subunit beta [Desulfarculus baarsii DSM 2075] gi|301640020|gb|ADK85342.1| glycyl-tRNA synthetase, beta subunit [Desulfarculus baarsii DSM 2075] Length = 695 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 209/730 (28%), Positives = 329/730 (45%), Gaps = 66/730 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV----IYQNMRQYWTPHRLFLYL 56 M + L EI EE+PAR E ++ + +L EG+ ++ + P RL L+ Sbjct: 1 MAELLFEIGCEEMPARFVAPGIEQMAALGAEMLVREGLCASPDAAQVKAFGAPRRLALWA 60 Query: 57 KGLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY 109 + L+ P++ E+ LGP G KA GF +S G++ S I D KG Sbjct: 61 RNLAAIQPDRQEQVLGPPKANAYDQNGEPTKAALGFAKSQGVELTSLTFI--DTDKGPRL 118 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 V R VL ++ ++ + + KSMRW + F + RP+ + + Sbjct: 119 GYVKTIAGRPAMAVLPELLVKLVESLHFAKSMRWGSEK-----FRFARPIHWFVALF--- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +++ L++ + G+ T GHRF AP I+V+ + Y+ L +A VL+D R A Sbjct: 171 --DGQVVPLEITGVKSGDQTRGHRFMAPQAIQVRGGEDYLTKLRQAHVLVDRPERIEATR 228 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + A+ G L+ D+ LL E LVE GSFDK++L +P E++ ++ +Q+ Sbjct: 229 QQVAQAAAQAGGRLLADEALLLENADLVEQPTACWGSFDKQFLEVPREVVITAMREHQRY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 +G L FI V+N D A + G+ RV+ ARL DA F D+ Sbjct: 289 HSLEDDQGRLLPAFIAVNNTTPRD-LAVVANGHQRVLRARLADARFFLDEDR-------- 339 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +V +HAK+G+ ++V R+ L +AQ + ++ Sbjct: 340 ------------KRPLADYLGDLQ--NVTYHAKLGSSFDKVQRVIDLAVWLAQRLAPELV 385 Query: 410 L-VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL T +V EFP LQG IG EYA E+ AI EH +P G + Sbjct: 386 EPTRRAAQLAKCDLVTGMVGEFPSLQGVIGAEYARRDGEDPQVATAIAEHYQPVGADAPL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P I V LAD++DT+ + + E P+G+ DPYALRRA + ++R+++E + I LSQ Sbjct: 446 PKGMIGALVGLADRIDTICGLFGVGEAPTGAADPYALRRAAIAVLRLLMEKNLTISLSQT 505 Query: 529 IED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + FF RL + + D+ +A+L D+ + Sbjct: 506 LAQALAGLAGRLSAADQTVADEVTKFFAARLAGLMAEAGAPTDVAQAVLAAGLDDPGAAM 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L S KR+ IL E + S P + +EAE++L + Sbjct: 566 ARAKALAAVKDSPDFAPLAAGMKRVMNILKKE--AAQVPSHAPDPALMTIEAERQLRQAV 623 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 Q Y Q L + PI+ FFD VLV +D+ VR NRL+LL+ + + Sbjct: 624 LAVADEAQALFASGDYAQFLRRLSELKGPIDAFFDGVLVMDNDQAVRQNRLALLESVARL 683 Query: 692 ILIVINVQKI 701 + + Sbjct: 684 FRGLAEFTYL 693 >gi|89895829|ref|YP_519316.1| hypothetical protein DSY3083 [Desulfitobacterium hafniense Y51] gi|123397647|sp|Q24SX0|SYGB_DESHY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|89335277|dbj|BAE84872.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 690 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 202/731 (27%), Positives = 335/731 (45%), Gaps = 72/731 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI +EEIPA+ L +E + YQ+++ Y TP R + ++GL Sbjct: 1 MAKDFLLEIGTEEIPAKFAPGVLNQLREQAQKHCQELRLDYQDLKVYTTPRRFAVLIQGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP V G KA GF R G++ ++ A Sbjct: 61 AEKQTDFTAEVKGPAVKAAYDAEGNPTKAAQGFARGQGVEPKD--LFVQELNGVSYVYAR 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +L + I + +PK MRW+ F + RP++ I+ + +E Sbjct: 119 KFELGQPTLQLLPKLCTDLITGLHFPKPMRWADLE-----FRFARPIRWIVALFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + + G + GHR P+ + S Y + + +A V++DPE RR ++ Sbjct: 171 --VIPFEFVGLASGKASRGHRTLG-GPVTLDSPADYEKQMLQAFVMVDPEQRRQSVWEQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H LA+ VG ++ +D DLL+E+ ++E+ +G Y+ LPE +I +K +Q+ F Sbjct: 228 HALAAKVGGDVEKDDDLLDEVTHIIEYPTALLGEVAPNYMHLPEPVITTPMKEHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +EG L FI V N A + GN +V+ ARLEDA +++ DQ Sbjct: 288 RDKEGKLLPYFITVRNGD-DHALAKVKAGNEKVLKARLEDAAFYYREDQ----------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VA 409 PL + + +LD V +H K+G+ +RV RIR L + IA + + Sbjct: 336 ---------KTPLAELVEKLD--KVTYHEKLGSVRQRVERIRTLARGIAARLGMESKKQD 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 LV+R +L+KADL T +V +FPELQG +G +YA + E C I EH +PR + +P Sbjct: 385 LVERTALLAKADLVTLMVYDFPELQGIMGADYARMVGEKPEVCTGILEHYQPRFAGDELP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + VS+ADKLD ++ + I +P+GS+DPYALRR G++ IILE DI L Q I Sbjct: 445 QSYTGQIVSVADKLDAIVGAFGIGIQPTGSQDPYALRRQAQGVVGIILEAGWDISLEQLI 504 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 L FF RL+ L ++ R+D ++A+L ++ + Sbjct: 505 AASYVNFAEQGISLLPLADLQSALQDFFQQRLRFVLQEQGARYDTLDAVLAQGSNQITRA 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L + + + + R + + + + P+ L+ E L A Sbjct: 565 ARKAQVLAAKRETTEFVPYSQAYIRCLNLSKKAQ------TQPLDPKNLIDPTEIALAAA 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + ++ Y + L + IE F+ V++ V+D ++ RL+LL Sbjct: 619 LVQRQEAFAALIEKGDYAEAYALASELIPMIEALFNAVMIMVEDEILKQARLALLGECVA 678 Query: 691 IILIVINVQKI 701 I+ + ++ + Sbjct: 679 ILGCLGDLSLL 689 >gi|257419861|ref|ZP_05596855.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis T11] gi|257161689|gb|EEU91649.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis T11] Length = 694 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 201/733 (27%), Positives = 352/733 (48%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L DK+LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDKELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFDV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D++V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDKKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|256617037|ref|ZP_05473883.1| glycyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256596564|gb|EEU15740.1| glycyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] Length = 694 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 201/733 (27%), Positives = 352/733 (48%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDK----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 335 ---------KSTIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D M + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRMIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|78042751|ref|YP_359301.1| glycyl-tRNA synthetase subunit beta [Carboxydothermus hydrogenoformans Z-2901] gi|77994866|gb|ABB13765.1| glycyl-tRNA synthetase, beta subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 690 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 212/729 (29%), Positives = 358/729 (49%), Gaps = 70/729 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+LLEI EEIPAR E++ LKE GV Y+ + TP R+ Y+KG+ P Sbjct: 2 DYLLEIGVEEIPARFIPGIIEEVKNKGEEFLKEFGVQYEALISEATPRRIVFYVKGVLPK 61 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EKI+E GP G +A+ GF RS G++ I+K+ A + Sbjct: 62 TEEKIQEVKGPAKKASYDSEGNPTRALLGFARSQGIEPNE--VIEKEVNGVIYVFARKKT 119 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++++L I I+ + +PK MRW F +IRP++ ++ +L EK+ Sbjct: 120 GGNPVDELLPEIARKLIKNLSFPKPMRWGDID-----FKFIRPIRWLVSLL-----DEKV 169 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I L++ I I+ GHRF + + Y + E V++ R I HR Sbjct: 170 IPLEIAGIKADRISRGHRFLGQKEVVLDRAADYFVAMRENYVIVSLNERIEMIRAQLHRA 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ++ G+ + +D++LL E LVE+ V +G ++++L LP+E+I +K +Q+ F Sbjct: 230 SAEEGVVVDQDEELLLENANLVEYPTVVIGEINREFLELPKEVIITPMKEHQRYFPLFKN 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L + F+ V N + A I +G ++V+ ARL DA F++ D Sbjct: 290 DGSLYHKFLAVRNGG-RENLAEIAEGYAKVLKARLYDARFFYRED--------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVD 412 L KPL +L +VF K+GT ++V R++ L I + ++ D + Sbjct: 334 -----LKKPLAAYNEKL--TRIVFQEKLGTVWDKVLRLKELVVAIGRELNCDDEVKSYAV 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSKADL T +V EFPELQG +G++YA+ E +AI EH PR + V T++ Sbjct: 387 RAAELSKADLATNMVYEFPELQGIMGRDYALKSGERKEVAEAIFEHYLPRFSGDIVATSE 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 + I +S A+K+D L F+A+ + P+GS DP+ LRR LG++R ++ENK L + + Sbjct: 447 VGILLSCAEKIDNLTAFFALKQIPTGSADPFGLRRQALGLLRTLIENKRFFSLKKAFDAA 506 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + L+ F + R K +L + +D I+A+L D+ + Sbjct: 507 FNLLPAEVREKANFAEVYEELLEFIYQRFKGFLLEEGFSYDTIDAVLATGKDDFYDLYLR 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ L + + R + + + + E++ L AEK L+A + Sbjct: 567 VRALENLRNHPSFTALTTTFTRAYNLARKGQGR------EVAESLLYEPAEKELFAEFRE 620 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +++E + K Y + + + ++ P++ FF++VLV +D ++R+NRL LL I ++L Sbjct: 621 ISLNVKELLREKAYLKAMEEVAALANPLDRFFNEVLVMAEDEKIRENRLGLLGAIAGLVL 680 Query: 694 IVINVQKIV 702 + ++ KIV Sbjct: 681 EIADLSKIV 689 >gi|329119287|ref|ZP_08247974.1| glycyl-tRNA synthetase beta subunit [Neisseria bacilliformis ATCC BAA-1200] gi|327464634|gb|EGF10932.1| glycyl-tRNA synthetase beta subunit [Neisseria bacilliformis ATCC BAA-1200] Length = 686 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 207/710 (29%), Positives = 350/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I + + Y +P RL + ++ + ++ + Sbjct: 15 PPKALNNLGNAFAAAVAEGLEKAQLIQGDAQYTAYASPRRLAVQVQNVKAVQDDQHVVKK 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF RS G S I K DVY + + + ++L+ Sbjct: 75 GPAVANAMKDGAPTKALEGFARSCGADIGSLKIIH--DGKQDVYAHEFTQAGKPLAELLE 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S +++RP+ ++ + ++ ++ + Sbjct: 133 DIINQAVKKLPIPKVMRWGS-----STHTFVRPVHGLVIL-----HGANVVPANVLGLQS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI ++ A + + Sbjct: 183 GNTTLGHRFLSDGLITIENADSYAEQMREQGKVIASFATRKAAIQTALNQHAGRLNATVA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F+ +L +P+E + LT++ NQK F G L N F+ Sbjct: 243 ADEALLDEVSALVEWPVVLEAGFEAHFLEVPQECLILTMQQNQKYFPLLDANGRLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN++A+D + I+ GN RV+ ARL DA F+K+DQ N Sbjct: 303 LVSNLEAAD-PSHIIHGNERVLRARLSDAEFFYKQDQKN--------------------T 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + A + AD A +RA L+KADL T Sbjct: 342 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHTAAALGADRAQAERAARLAKADLVT 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L EN + DA+E+H +PR + +P + ++ V+LADKL+ Sbjct: 400 EMVGEFPELQGTMGKYYARLDGENAAIADALEQHYRPRFAGDALPESPVATAVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R+++++ +D+ L Sbjct: 460 TLVGIWGIGLVPTGDKDPYALRRAALGILRMLMQHGLDVNDLIQTAFASFPQGLLNDKTP 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 + F RL + L D D++ A+L L + + + F + + Sbjct: 520 AEVADFMQARLAVLLQ-NDYPQDIVAAVLAKRLGRLNDLAAKLDAVASFKALPEAAALAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + E LYA I+ ++ + + Sbjct: 579 ANKRVQNLLKKADAE----LGAVNEALLQQDEEHALYAAAQAMQPKIEAALARQDFQAAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ ++ FFD V+V DD V+ NRL+LL + + V ++ + Sbjct: 635 SELAAVKPQVDAFFDGVMVMADDTAVKQNRLNLLNQLSQQMNAVADIALL 684 >gi|219670261|ref|YP_002460696.1| glycyl-tRNA synthetase subunit beta [Desulfitobacterium hafniense DCB-2] gi|254781846|sp|B8FUJ0|SYGB_DESHD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219540521|gb|ACL22260.1| glycyl-tRNA synthetase, beta subunit [Desulfitobacterium hafniense DCB-2] Length = 690 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 202/731 (27%), Positives = 335/731 (45%), Gaps = 72/731 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI +EEIPA+ L +E + YQ+++ Y TP R + ++GL Sbjct: 1 MAKDFLLEIGTEEIPAKFAPGVLNQLREQAQKYCQELRLDYQDLKVYTTPRRFAVLIQGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP V G KA GF R G++ ++ A Sbjct: 61 AEKQTDFTAEVKGPAVKAAYDAEGNPTKAAQGFARGQGVEPKD--LFVQELNGVSYVYAR 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +L + I + +PK MRW+ F + RP++ I+ + +E Sbjct: 119 KFELGQPTLQLLPKLCTDLITGLHFPKPMRWADLE-----FRFARPIRWIVALFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + + G + GHR P+ + S Y + + +A V++DPE RR ++ Sbjct: 171 --VIPFEFVGLASGKASRGHRTLG-GPVTLDSPADYEKQMLQAFVMVDPEQRRQSVWEQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H LA+ VG ++ +D DLL+E+ ++E+ +G Y+ LPE +I +K +Q+ F Sbjct: 228 HALAAKVGGDVEKDDDLLDEVTHIIEYPTALLGEVAPNYMHLPEPVITTPMKEHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +EG L FI V N A + GN +V+ ARLEDA +++ DQ Sbjct: 288 RDKEGKLLPYFITVRNGD-DYALAKVKAGNEKVLKARLEDAAFYYREDQ----------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VA 409 PL + + +LD V +H K+G+ +RV RIR L + IA + + Sbjct: 336 ---------KTPLAELVEKLD--KVTYHEKLGSVRQRVERIRTLARGIAARLGMESEKQD 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 LV+R +L+KADL T +V +FPELQG +G +YA + E C I EH +PR + +P Sbjct: 385 LVERTALLAKADLVTLMVYDFPELQGIMGADYARMVGEKPEVCTGILEHYQPRFAGDELP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + VS+ADKLD ++ + I +P+GS+DPYALRR G++ IILE DI L Q I Sbjct: 445 QSYTGQIVSVADKLDAIVGAFGIGIQPTGSQDPYALRRQAQGVVGIILEAGWDISLEQLI 504 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 L FF RL+ L ++ R+D ++A+L ++ + Sbjct: 505 AASYVNFAEQGISLLPLADLQSALQDFFQQRLRFVLQEQGARYDTLDAVLAQGSNQITRA 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L + + + + R + + + + P+ L+ E L A Sbjct: 565 ARKAQVLAAKRETTEFVPYSQAYIRCLNLSKKAQ------TQPLDPKNLIDPTEIALAAA 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + ++ Y + L + IE F+ V++ V+D ++ RL+LL Sbjct: 619 LVQRQEAFAALIEKGDYAEAYALASELIPMIEALFNAVMIMVEDEILKQARLALLGECVA 678 Query: 691 IILIVINVQKI 701 I+ + ++ + Sbjct: 679 ILGCLGDLSLL 689 >gi|304388483|ref|ZP_07370586.1| glycyl-tRNA synthetase beta subunit [Neisseria meningitidis ATCC 13091] gi|304337480|gb|EFM03646.1| glycyl-tRNA synthetase beta subunit [Neisseria meningitidis ATCC 13091] Length = 687 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 210/710 (29%), Positives = 346/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTAD-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + A A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGAGAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E A+E+H +PR + +P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAKAVEQHYQPRFAGDKLPEGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L I ++ + EF + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDIAAKLQAVAEFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V DD V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMADDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|325141525|gb|EGC63995.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis 961-5945] gi|325199022|gb|ADY94478.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis G2136] Length = 687 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 210/710 (29%), Positives = 348/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTAD-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +R L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERTARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|227498772|ref|ZP_03928914.1| metal-dependent phosphohydrolase [Acidaminococcus sp. D21] gi|226904226|gb|EEH90144.1| metal-dependent phosphohydrolase [Acidaminococcus sp. D21] Length = 686 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 203/728 (27%), Positives = 334/728 (45%), Gaps = 70/728 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L EI +EE+PA+ ++ + LKE + ++ + Y TP R+ +G++ Sbjct: 1 MATLLYEIGTEEMPAQYMPGILKNYKELAETKLKEARIPFEKVSVYGTPRRMAFVAEGIA 60 Query: 61 PHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E GP G KA+ GF R G++ + K+D A+ Sbjct: 61 DRQEDMTAESKGPSLKIAFDADGNPTKAVQGFARGQGVEVSALE--KRDG----YVYAIK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +L ++ + + +PK+MRW+ F ++RP ++ +L +E Sbjct: 115 HTKGGETKVLLPALLDDILHSLSFPKTMRWADYD-----FGFVRPFHWMVALLDSE---- 165 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I ++ ++ GN+T GHRF I + S + Y++ LEE +++D E RR I Sbjct: 166 -VIPVEANDVKSGNVTRGHRFLGSQTITIPSAEAYVKTLEENFIIVDVEKRRALIREQIE 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G +DLL+E+ LVE+ GS D KYL LP+E + ++ +Q+ F Sbjct: 225 ALGKKAGGHTAISEDLLDEVTYLVEYPTALCGSIDDKYLKLPKEAVITPMRDHQRYFPVL 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V N S+ + GN RV+ ARL+DA+ F++ D+ Sbjct: 285 DDSGKLLPYFITVRNG-NSEHLDIVTHGNERVLRARLDDAVFFFENDR------------ 331 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVALV 411 K L+ L DV F +G E+ R+ L + + AD + Sbjct: 332 --------KKSLEAHREAL--HDVAFQRGMGNMYEKTERLEALTSCLLKESGVAADEKAL 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSKADL T +V EF ELQG +G+EYA+L E + AI E PR + +P Sbjct: 382 VRAARLSKADLVTGMVTEFTELQGTMGREYALLDGEGDTVSTAIGEQYMPRFAGDELPQT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +++ADKLD + ++ E P+GS+DPYALRR LGI+ I+ + I L+ I++ Sbjct: 442 NEGRLLAIADKLDNITATFSRGEAPTGSQDPYALRRQALGILNIVTDGNIHFALTSAIKE 501 Query: 532 Q----------------NLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTIVDLI 574 +++ FF R K + DR +R+D+++A+L D+L Sbjct: 502 TLSRLPKTNQSEDKLVADIVEFFAQRSKNMMLDRGVRYDIVDAVLGAEGRDDLCDAFAAA 561 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 L + + K + L + R+ I + +S L +AEK L+ + Sbjct: 562 DALTAYLGTDKAPETLQAFTRVENITKKSR-----VDAPVSEALLREDAEKALFEAVEKA 616 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ + + + + S+ PI FFD V+V D V+ NRL+LL I+++I Sbjct: 617 AENVHGMLLSRDFAGVLTACDSLSAPINHFFDDVMVMDKDEAVKQNRLALLTKIRSLIGC 676 Query: 695 VINVQKIV 702 V +V +V Sbjct: 677 VGDVSLLV 684 >gi|270291314|ref|ZP_06197536.1| glycyl-tRNA synthetase beta subunit [Pediococcus acidilactici 7_4] gi|270280160|gb|EFA25996.1| glycyl-tRNA synthetase beta subunit [Pediococcus acidilactici 7_4] Length = 690 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 207/734 (28%), Positives = 354/734 (48%), Gaps = 78/734 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +LLEI EEIPA + + + L+ + LKE + Y ++ Q+ TP RL + + GL Sbjct: 1 MAHSYLLEIGLEEIPAHVVTPSIQQLAQKVAKFLKENRLSYDSIEQFSTPRRLAIRINGL 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 P+ E+ GP G KA GF + GL I KG Y+ V Sbjct: 61 GDRQPDIEEDAKGPARKIAQDADGNWTKAAIGFTKGQGLTVDD---ITFKTIKGTEYVYV 117 Query: 113 LR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +++L + ++ + +P M+W+ F ++RP++ ++ IL Sbjct: 118 HKLIQGKTTQEILPG-IKDVVESLNFPTMMKWANYD-----FKFVRPIRWLVSIL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ + +I G + GHRF + + + Y L+ V++D E R+ I Sbjct: 167 DDEVLPFQILDIKAGRQSQGHRFLG-KAVDLANPSEYEEKLQAEFVIVDAEKRKALIREQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A E+ + DLLEE+ LVEW F G FD KYL +PEE++ +++ +Q+ F Sbjct: 226 IQAIAQEENWEVTPNADLLEEVNNLVEWPTAFSGKFDPKYLAIPEEVLITSMRDHQRFFF 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R ++G L FI V N + +++GN +V+ ARLEDA F+ DQ N Sbjct: 286 VRNQDGKLLPNFISVRNG-NKEHLENVIRGNEKVLTARLEDAAFFYDEDQKN-------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +D + RL V FH KIGT E+++R+ + + IA+++ D Sbjct: 337 ------------SIDYYVDRLK--KVSFHDKIGTMAEKMTRVGSIAQVIAKMLGLDAETA 382 Query: 412 D---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 383 EDLQRAAAIYKFDLVTGMVGEFPELQGVMGEKYALLKGEKSAVAQAIREHYMPNSAEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + ++LADK D + +F++ PSGS DPYALRR GI+RI+ + + L++F Sbjct: 443 PESTVGAVLALADKFDNIFSFFSAGMIPSGSNDPYALRRHAYGIVRILAQRDWSLDLNKF 502 Query: 529 IE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E ++ FF+DR+K YL + + +D+ +A+L N+ Sbjct: 503 EEAVKQALADDQTSFGVDVDKNFAEVVEFFNDRIKQYLDHQSVSYDIEDAVLAGSQHNVT 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 TI+ + L ++ + + + R+ +I K L + PQ E E +L+ Sbjct: 563 TIIAAAEVLTNAKAADSFKDEIEALTRVQRI---ATKNTTAGDLAVDPQLFNNETEGKLF 619 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +I+ E+M+ L S+ I +FD +V D +++ NRL+++ + Sbjct: 620 DLITKI-----EAMNDSDMAAFFKELTSLTPAITEYFDATMVMDKDAKIKANRLNMMSRL 674 Query: 689 KNIILIVINVQKIV 702 N++L V ++ K++ Sbjct: 675 ANLVLRVGDLTKVM 688 >gi|254450582|ref|ZP_05064019.1| glycyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 238] gi|198264988|gb|EDY89258.1| glycyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 238] Length = 741 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 256/767 (33%), Positives = 384/767 (50%), Gaps = 94/767 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAA DL ++ L + G+ Y + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQAKAAADLQKLVADGLVDAGLTYAGAGAFCTPRRLALSIEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GP+VGA AIDGF R G+ D +D KG+VY AV++KP R Sbjct: 61 AESPDTREERKGPKVGAPDGAIDGFCRGAGVS--RDALEARDTGKGEVYFAVIQKPGRKA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ AI+ PWPKSMRW + W+RPL SI+CIL E +++ + + Sbjct: 119 ADIIAEVLEGAIRNFPWPKSMRWG-----TGSLKWVRPLHSIVCILTDE-GGAEVVAMSV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP V S D Y L+ A V+L + R + I ++A A A G Sbjct: 173 DGIAAGNTTRGHRFMAPDEFSVTSFDDYEAKLKRAKVILRSDERADMIWSEASNQAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELV+DK LL E+ GLVEW V MG+ +L LP E++ ++K +QK F R + G + Sbjct: 233 LELVDDKGLLAEVAGLVEWPVVLMGTIADDFLSLPPEVLTASMKEHQKFFSVREKSGQIV 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D G I+ GN +V+ ARL DA FW+ D +A Sbjct: 293 -RFVTVANRETADRGKTILAGNQKVLFARLSDAKFFWENDLRVAKAGGQAWLAA------ 345 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+GT E V R+ L +++A L+ AD + A +KA Sbjct: 346 -------------LGNVTFHNKLGTVAELVDRMAALSREVAPLVGADPDEAEAAARFAKA 392 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFP+LQG +G+ YA + + A +EH P GP ++VPT +S+ V+LA Sbjct: 393 DLSSEMVYEFPDLQGLMGRYYAAEAGLSDAVALAAQEHYSPLGPSDDVPTEPVSVAVALA 452 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF--- 537 +K+D L FWAI+EKP+GSKDP+ALRRA LG+IR++LEN++++ L + + + + Sbjct: 453 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENELELNLKKMLTKEIAFRYGFS 512 Query: 538 -----------------------FHDRLKLYLHD-----RDIRHDLIEAILRPENDNLLT 569 + ++ + + NLL+ Sbjct: 513 VFGPLSKPYLDALESASAKDEDLLAEDIRNAYEEILPDLEAHVIEESATATPKAAKNLLS 572 Query: 570 IV-DLIK-----------HLNEFFSSAKGEKFLLSAKRI--------------------- 596 D +K ++ + + LL R Sbjct: 573 FFHDRLKVYLKDEGISHDVIDASLAMPGNDDLLLLVNRAKALAAFLKTDDGVNLIQGFKR 632 Query: 597 -FQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 IL+ E K+ E S ++ + EK L+ + I +M + + + Sbjct: 633 ANNILSQAEDKDGVEYSFGAEAKFADADEEKALFTALDAADAKIAPAMAAEDFGAAMSAM 692 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + PI+ FF+ V +N D +R NRL+LL I+ I L V +++K+ Sbjct: 693 ADLRAPIDAFFNTVQINADSAVLRRNRLNLLHRIRTICLSVADLRKL 739 >gi|331701383|ref|YP_004398342.1| glycyl-tRNA synthetase subunit beta [Lactobacillus buchneri NRRL B-30929] gi|329128726|gb|AEB73279.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus buchneri NRRL B-30929] Length = 693 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 345/733 (47%), Gaps = 74/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + FLLEI EEIPA + + + L LK++ + + ++ + TP RL LY+ L Sbjct: 1 MANNFLLEIGLEEIPAHVVTPSIKQLKKRASDFLKDQRISFAEIKTFSTPRRLALYITDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ + GP G KA GF R G KD K + Sbjct: 61 ADKQPDIDKSVKGPAKKIAQDSDGNWTKAAIGFSRGQGATPDD--ITFKDVKGVEYVFVE 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++++L + I + +P M+W T +F ++RP+K ++ +L Sbjct: 119 KHIAGKSLKEILPGM-KDVITAMTFPTMMKWGTY-----SFEYVRPIKWLVALL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+I + ++ +T GHRF I++ + D Y L E V+ D R+ I Sbjct: 168 DKVIPFKILDVDTDRMTSGHRFLG-KDIELANADEYEEKLTEQYVVADAVKRKELITKQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +++A+ ++ D DLLEE+ LVEW F G+FD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NKIAADNNWQINLDPDLLEEVNNLVEWPTAFFGNFDEKYLAIPDEVLITSMKDHQRFFYV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L FI V N +V GN +V+ ARL+DA+ F++ DQ Sbjct: 287 TDQDGKLLPHFISVRNG-NDYDIQNVVAGNEKVLTARLDDAMFFYQEDQ----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI---AQLIDADVA 409 K + + RL V FH KI T E++ R++V+ K + A L + ++ Sbjct: 335 ---------KKSIADYVERLK--KVSFHDKISTMYEKMQRVQVISKHLGNLAGLSEQELK 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 ++RA + K DL T +V EF ELQG +G +YA+L+ E+ + AI EH P +P Sbjct: 384 DLERAASIYKFDLVTGMVGEFAELQGVMGDKYALLKGEDQAVATAISEHYMPISANGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + +++ADKLD+++ F+A PSGS DPYALRR G++RI+ + +++ L Q Sbjct: 444 KTNVGSILAIADKLDSILTFFAAGMIPSGSNDPYALRRQATGVVRIVADKQLNFDLDQTL 503 Query: 529 -------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + F DR+K YL D +R+D+ +A+ + N+L Sbjct: 504 NLLIDREDQASVAPKLDMKAQVPAVSDFVKDRIKQYLDDLGVRYDIADAVTSGSHTNILF 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + K L + + + S R+ +I K ++ + P ++EK L Sbjct: 564 NIASAKTLQDHKDDPDFKDIIESLTRVQRIAKKGAFKADDL--TVDPALFENDSEKALNQ 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++ + + L + + I +FD +V D ++++N L L I Sbjct: 622 AVAAAAKDYTHQSAEEDF----GRLAQLKDKINDYFDATMVMAKDEKLKNNHLRQLTMIA 677 Query: 690 NIILIVINVQKIV 702 N+I+ + ++ K+V Sbjct: 678 NMIMYLGDLDKLV 690 >gi|325133391|gb|EGC56055.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M13399] Length = 687 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 213/710 (30%), Positives = 352/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ + Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAELTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLVVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALEGQARRLNAAVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTAD-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L ++VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--VNVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVVAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E+ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVDESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|325204882|gb|ADZ00336.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M01-240355] Length = 687 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 210/710 (29%), Positives = 349/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I + K DVY + + + ++L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAGAKIEDLTII--NDGKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + V+ R+ AI + A + + Sbjct: 184 GNQTLGHRFLSGGEIAIENADSYAAQMRGQGKVVASFAERKAAIQTALNEQAGRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F R G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDRNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEQTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V DD V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMADDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|241662033|ref|YP_002980393.1| glycyl-tRNA synthetase subunit beta [Ralstonia pickettii 12D] gi|240864060|gb|ACS61721.1| glycyl-tRNA synthetase, beta subunit [Ralstonia pickettii 12D] Length = 697 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 209/718 (29%), Positives = 346/718 (48%), Gaps = 66/718 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G+ +P++ E+ Sbjct: 14 PPKALARLGEAFARGLFDGLSAQGLLEEGAAVEGFATPRRLAASITGVRRTAPDRELREK 73 Query: 71 LGP------RVGAGK----KAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRL 119 + P G K + ++ G++ I+ +++ P K + L Sbjct: 74 VLPVTIAFDAEGKPAAPLVKKLAALAKTVGVEAIAPESLERAPDGKAEALFYRYTARGAL 133 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L+T + + +P PK M + + ++RP ++ +L +E +I + Sbjct: 134 LADGLQTALSQTVANLPIPKVMTYQRPNG--ENVQFVRPAHKLIALLDSE-----VIPVS 186 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASA 238 + GN+T GHRF + I +Q Y LE V+ R+ AI + + A A Sbjct: 187 AFGLQSGNVTLGHRFLSAGEIVIQDAASYASTLESQGKVIAGYGKRKEAIRAELLKTAGA 246 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +V + LL+E+ LVEW V+ F++ +L +P+E + LT++TNQK F +G Sbjct: 247 D--TVVMPEALLDEVNALVEWPVVYPCHFEEAFLAVPQECLILTMQTNQKYFALTDAQGH 304 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSNI A+D AI+QGN RVV RL DA F+++D+ Sbjct: 305 LRNRFLIVSNI-ATDTPEAIIQGNERVVRPRLADARFFFEQDK----------------- 346 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 KPL R+ L VV+H KIGTQ ERVSR++ + ++A+ + ADVA R +L+ Sbjct: 347 ---KKPLADRVPLLSR--VVYHNKIGTQLERVSRLQAIAGQLAEKLGADVAHASRGALLA 401 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P+ V+ Sbjct: 402 KADLLTDMVGEFPELQGTMGTYYARHDGEPDDVALACSEHYQPRFAGDALPSTATGTVVA 461 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF---------- 528 LADK +TL+ W I +P+G KDP+ALRR LGI+R+++E + + + Sbjct: 462 LADKFETLVGIWGIGLQPTGEKDPFALRRHALGILRMLIEKPLALTIDDALQIAAASFDG 521 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + F +DRL+ YL D+ + +EA++ L IV ++ + F + Sbjct: 522 IAAVKPNLAAITDFLYDRLRGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAAL 581 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KRI IL KK + P L +AE+ L+ + + ++ Sbjct: 582 PQAEALAAANKRITNIL----KKTDVAIGAVQPPLLKEDAERALHQSVVAAEPQVHDAFA 637 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L + E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 638 RGDFTTALKTLAGLREAVDTFFDGVMVMADDTALRDNRLALLAELHGLMNRVADISKL 695 >gi|119509794|ref|ZP_01628938.1| Glycyl and Arginyl tRNA synthetase [Nodularia spumigena CCY9414] gi|119465529|gb|EAW46422.1| Glycyl and Arginyl tRNA synthetase [Nodularia spumigena CCY9414] Length = 716 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 196/744 (26%), Positives = 326/744 (43%), Gaps = 73/744 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + L + + Y TP RL + + GL Sbjct: 1 MTAFLLEVGTEELPASFLSDAILQWRSRIPQSLAANSLSSAAVEVYGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G A GF + G+ + + +KGD Sbjct: 61 SQQPDREEEIKGPPAQAAFKNGQPTPAATGFAKKQGVDITTLEI--RPTEKGDFVFVKKS 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + ++L ++P I + + MRW + RP++ ++ +L + Sbjct: 119 IPGRPVAEILTELIPQWISGLEGKRLMRWGNGE-----MKFSRPIRWLVALLDDTVLPIE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ K I ITYGHR P + + Y+ L A V+++PE R N I + Sbjct: 174 LVNGS-KTITSDRITYGHRVLHPATVTISEATDYVNTLRNAFVIVEPEARANIIQREVEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A G + DLL+E+ LVE+ +G F+ ++L LP E+I + T+Q+ F Sbjct: 233 AAEKAGGSTIFYPDLLKEVTNLVEYPSAVVGKFEPEFLELPTEVITEVMVTHQRYFPVFK 292 Query: 295 R--EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L FI VSN + I GN RV+ ARL D F+K D Sbjct: 293 AAETKELLPNFITVSNGDPTKA-DIIAIGNERVIRARLADGKFFYKAD------------ 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-- 410 L+KPL + +L+ V F ++G+ ++V RI + I++ ++ + Sbjct: 340 --------LAKPLVSYLPQLET--VTFQEELGSVRDKVDRIVTIADYISRQLELEPNKRE 389 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +RA +L KADL +++V EFPELQG +G++YA+ E+ AI +H P G + +P Sbjct: 390 KTERAALLCKADLVSQMVYEFPELQGIMGEKYALASGEDAEVASAIVQHYLPTGAGDILP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 V LAD+LDTL++ + + P+GS DP+ALRRA ++ I + I L + + Sbjct: 450 ETLTGQIVGLADRLDTLVSIFGLGLIPTGSSDPFALRRAANAVVNITWFANLPINLEKLL 509 Query: 530 ED-----------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPEN------- 564 L FF R++ L D + I +DL+ A+L + Sbjct: 510 TQIATDFAAKYNKEQDKLIAALQEFFLQRIRTLLQDEKQIDYDLVNAVLGENDREYTERA 569 Query: 565 -DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK--NREISLEISPQYLLL 621 +LL + D +L + +K + R ++ A + E + I P+ Sbjct: 570 LQDLLDVRDRALYLQQIRKDGTLDKIYETVNRSTRLAAQGDLDFQQLEPTSLIQPELFQK 629 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVR 678 +E+ Y + + Q + + + Y + L I + FF D VLV + +++ Sbjct: 630 SSEQAFYNALLELVPQTQAAKETRNYQLLIATLEKIAPTVASFFDGEDSVLVMDPNPDIK 689 Query: 679 DNRLSLLQYIKNIILIVINVQKIV 702 NRL LL ++N ++ + IV Sbjct: 690 RNRLHLLGLLRNHARVLADFGAIV 713 >gi|304403966|ref|ZP_07385628.1| glycyl-tRNA synthetase, beta subunit [Paenibacillus curdlanolyticus YK9] gi|304346944|gb|EFM12776.1| glycyl-tRNA synthetase, beta subunit [Paenibacillus curdlanolyticus YK9] Length = 693 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 197/734 (26%), Positives = 332/734 (45%), Gaps = 74/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI EE+PAR A L L L E + + + Y TP RL + ++ + Sbjct: 1 MAKDLLFEIGLEEVPARFVRAAVNQLRDKLAKWLDESRISHGEVEAYATPRRLAVLVREV 60 Query: 60 SPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF +S G++ K+ + Sbjct: 61 AEKQSDVNEEVKGPSRKIAQDAEGQWSKAALGFAKSQGVEPEQ--LFFKELAGVEYVYGN 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 VL + + + +PKSMRW + ++RP+K ++ + + Sbjct: 119 KSSVGVETASVLTEGLTAIVTSMTFPKSMRWGSYD-----LKFVRPIKWLVAMFGS---- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I+ L+L + GN+T GHRF +++ Y+ L V+ D R I+ Sbjct: 170 -QIVPLELAGVQSGNVTRGHRFLGAET-TIETPSSYVEALRAQHVIADIAEREAEIVRQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA G E+ +DLLEE++ LVE V G+FD +L +P+E++ +++ +Q+ F Sbjct: 228 EALAQEQGWEIAVKEDLLEEVLFLVETPSVLFGTFDPSFLQIPQEVLITSMREHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + G L F+ V N + +GN +V+ ARL DA F+ DQ Sbjct: 288 LDKAGKLLPFFVTVRNGD-RTSLDVVAKGNEKVLRARLSDAKFFYAEDQKLA-------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA--- 409 + + +L+ +V+H ++GT ++V RIR + ++A + AD + Sbjct: 339 ------------ISDALQKLET--IVYHEELGTVADKVRRIRAIADQMAAHVQADASAVA 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA +SK DL T++V EFPELQG +G++YA E + AI EH +PR + P Sbjct: 385 DISRAADISKFDLVTQMVYEFPELQGIMGEDYARKAGEREAVAVAINEHYQPRFAGDRAP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +SL+DK+DT++ ++I P+GS+DPYALRR GI++ IL + + L Sbjct: 445 ASLAGAVISLSDKIDTIVGCFSIGIIPTGSQDPYALRRQAAGIVQTILAQGLPLALGDLF 504 Query: 530 E------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + L FF R+K L ++ +R+D+++A++ D+L V Sbjct: 505 DIALAVHEQRGLKRPAAEVRKELYEFFGLRVKNVLTEQGVRYDVVDAVMAAGFDDLKLTV 564 Query: 572 DLIKHL---NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + L + + + + R+ + A E S + P AE+ LY Sbjct: 565 ERASVLIGRAAGEEKNEFKTVVEAFNRVNNLAAKAE------SEVVDPALFAEPAEQALY 618 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 E + +LL ++ EPI +FD V+V +VR NRL+ L + Sbjct: 619 EAWKTAHPAYAERFRNGDIAGALELLAALKEPITAYFDSVMVMAQQEDVRRNRLATLAGL 678 Query: 689 KNIILIVINVQKIV 702 + I+ + + K+V Sbjct: 679 SSDIVKLADFAKLV 692 >gi|315170296|gb|EFU14313.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1342] Length = 694 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 350/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 KTAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|227892548|ref|ZP_04010353.1| glycyl-tRNA synthetase beta chain [Lactobacillus ultunensis DSM 16047] gi|227865669|gb|EEJ73090.1| glycyl-tRNA synthetase beta chain [Lactobacillus ultunensis DSM 16047] Length = 687 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 207/733 (28%), Positives = 348/733 (47%), Gaps = 79/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEMPAHVVPRSVKQLADRTKKFLKENGLKFKDIKTFSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T I KG Y V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDKDGNWTKAAQGFARGQGMTTDD---IYFKELKGTEYAYV 117 Query: 113 -LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++K + D+L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 118 HVQKEGKKASDILMGM-SDIIKDMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSD-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + +I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 170 ---VIPVKILDITAGRKTEGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + L ++ D+DLLEE+ LVE+ VF GSFDKKYL +P+E++ ++K NQ+ F Sbjct: 226 MNELVKKNHWQVKPDRDLLEEVTYLVEYPTVFAGSFDKKYLNIPDEVLITSMKDNQRYFE 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 286 VYDEDGNLINHFIAVRNG-NKDYLDNVISGNEKVLVARLDDAQFFYDEDR---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---V 408 PL + RL DV FH KIG+ E++ R+R++G +A+ + V Sbjct: 335 ----------KYPLSHFVDRLK--DVSFHDKIGSMAEKMQRVRLIGDYLAKRWNLPDNVV 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P + Sbjct: 383 KDFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGENEEVSVAIKEHYMPTTAEGPL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 -------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 DQ + F DR+K YL ++D+++A+L + Sbjct: 503 LPEIISMLNGVTPAKLPKGDADQEIADFIRDRVKQYLQKNKFKYDIVDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++ L + + + S RI IL + K ++++ +EK LY Sbjct: 563 VLAAANVLQLHHDDEEFKPVVESLTRIDNILKKAKFKG---NVDVDESLFDDNSEKELY- 618 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +Q D + + + I+ +FD ++ + +V++NRL+ L + Sbjct: 619 ------VGVQNLQDVESLADLYQGFVQLQPVIDQYFDTNMIMAKNEKVKNNRLAQLYAVS 672 Query: 690 NIILIVINVQKIV 702 + + ++ K+V Sbjct: 673 ELADRLGDLSKLV 685 >gi|323697788|ref|ZP_08109700.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. ND132] gi|323457720|gb|EGB13585.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio desulfuricans ND132] Length = 702 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 205/735 (27%), Positives = 342/735 (46%), Gaps = 69/735 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F+LEI +EE+PAR K A +L L E V ++ Y TP R+ ++ L+ Sbjct: 1 MAEFILEIGTEEMPARFVPKLAAELEEAFAKGLTESMVENGGVKCYATPRRITAHVPSLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E GP V G KA GF ++ G+ D + + KG+ A Sbjct: 61 LAQLSQEETVTGPPVRIAYDGDGNLTKAGQGFAKTQGVA--EDALFRMETDKGEYLAAKK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 D+L + I+ + +PK M W F++ RP++ +L +L A+ Sbjct: 119 TVGGGRTIDILPALCVKCIESLSFPKRMHWGDYD-----FTFGRPVRWLLALLDAD---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEA-MVLLDPECRRNAILNDA 232 +++ L+ + G T GHR P P V S Y + + V++DP RR I+ + Sbjct: 170 -VVEFTLENLTSGRETRGHRVMGPGPFSVASSADYFSVVRDQCKVVIDPVERRETIVAEG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +RLA A+G +V + LL+E+ LVE+ + +G D YL LP E++ +++++QK F Sbjct: 229 NRLAQALGGSIVWNDGLLDEVANLVEYPKPLIGDIDPLYLALPREVLLTSMQSHQKSFGL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ N++ D A + +G RV+ ARLEDA FW+ D Sbjct: 289 EGADGRLLPHFLTTLNLEPLDV-ALVKKGWERVLKARLEDARFFWEADCEVE-------- 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA------ 406 D + +L+ VVF +G+ G++ RI L +K+A+ +DA Sbjct: 340 ------------FDTWLEKLE--HVVFLGPLGSVGDKSRRIETLCRKLAETLDASQSILP 385 Query: 407 -DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 ++ RA L+KADL +E+V EF LQGK+G YA I E P GP Sbjct: 386 GEIEQYARAGRLAKADLVSEMVIEFDSLQGKMGGIYAERAGLGEIVSKGIYEQYLPAGPD 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 VP++ VS+ADK DT+ + + + P+G+ DPYALRR LGI RII+E+ +D+ L Sbjct: 446 TPVPSSLSGALVSMADKADTMAGCFGLGKVPTGANDPYALRRCALGISRIIMEHDLDLDL 505 Query: 526 SQFIEDQN------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 F++ L+ FF RL+ + +++A L +++ Sbjct: 506 EAFLKAAQKAYSGVKWKVEQNEALDKLLDFFAQRLRALFTGQGFDTRVVDAALGAGFNDI 565 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI-EEKKNREISLEISPQYLLLEAEKR 626 T+ + L EF A E+ +L+ KR I+ ++ ++ E E Sbjct: 566 RTLKARLDALAEFSRGADFERSVLTFKRAANIIRKQGDEAGEPLTGSYDADLFEDEHETA 625 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 A + + + +++ + + LL + ++ FFD V+V D +VR NRL+LL+ Sbjct: 626 FGAKLDELAPRFDDLWENRDFGGLFGLLGELRPAVDGFFDHVMVMCDAPDVRLNRLNLLK 685 Query: 687 YIKNIILIVINVQKI 701 + + + + + + Sbjct: 686 GLVDRLGRLADFNAL 700 >gi|194017648|ref|ZP_03056258.1| glycyl-tRNA synthetase, beta subunit [Bacillus pumilus ATCC 7061] gi|194010548|gb|EDW20120.1| glycyl-tRNA synthetase, beta subunit [Bacillus pumilus ATCC 7061] Length = 681 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 206/718 (28%), Positives = 350/718 (48%), Gaps = 61/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR ++ + L + +E+ + ++++ + +P RL + +KG++ Sbjct: 5 DVLLEIGLEEMPARFMPESTKQLGEKVKVWFEEQNISFEDVALFNSPRRLAVLVKGVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF R G T K+ K D + Sbjct: 65 QEDIKEEAKGPAKKIAQDAEGNWTKAAEGFARGQGASTDD--LYFKEIKGVDYVHVQKFQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++D+L + + +PK+MRW + +IRP+K I+C+ E+I Sbjct: 123 EGKQVKDLLPA-LGEIAASLSFPKNMRWGSKD-----LRYIRPIKWIVCLF-----GEEI 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + + G T GHRF + Y + L + V+ D + R+ +I + L Sbjct: 172 VPAHIAGVKSGRETRGHRFLG-KAATIDLPASYEQTLRDQFVIADSDKRKQSITEQLNAL 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + G + D +LLEE+ LVE+ V GSF++++L LPEE++ T+K +Q+ F + Sbjct: 231 SLEKGWVIPVDPELLEEVNNLVEYPTVLSGSFEEEFLALPEEVLVTTMKEHQRYFPVKNE 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N S+ + +GN +V+ ARL DA F+K D+ + Sbjct: 291 QGELLPHFITVRNG-NSEALENVARGNEKVLRARLSDAAFFYKEDEKLV----------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR-- 413 ++ + +LD VVFH K+GT G+++ R+ + ++A + AD +R Sbjct: 339 ---------IEDNIKKLD--KVVFHEKLGTIGDKLKRVTDIATRLAAHVGADDETTERVA 387 Query: 414 -AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A +SK DL T++V EFPELQG +G++YA E+ +I EH PR + P+ Sbjct: 388 RAASISKFDLVTQMVYEFPELQGIMGEKYAKALGEHEEVAKSINEHYMPRFAGDEAPSTL 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF---- 528 I V++ADKLD++ +F++I+ P+GS+DPY LRR GI++I+L+ +I + Sbjct: 448 IGAIVAVADKLDSICSFFSIDVIPTGSQDPYGLRRQASGIVQILLDRHWNISFKELLALA 507 Query: 529 ----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + LI F RLK L IRHD+++A+L EN +V L E Sbjct: 508 QVEAAHETALIEFLTHRLKYVLQAEHIRHDVVDAVLDVENIEPYAVVKKAAVLEESVKQE 567 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 ++ + R+ I E EI P+ E E++LY T ++E + Sbjct: 568 SFKETAEALGRVISISKKGE------DAEIQPELFENEHEQKLYEAYQQVETAVKEHVAA 621 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +Y + L ++ PI +FD +V+ DD +++ NRL+ + + +I N+ ++ Sbjct: 622 GQYSAALEALDTLKTPIVHYFDHTMVHADDEKLKRNRLAQMVKLAKVIQSFANMNNLI 679 >gi|285016900|ref|YP_003374611.1| glycyl tRNA synthetase, beta subunit protein [Xanthomonas albilineans GPE PC73] gi|283472118|emb|CBA14625.1| probable glycyl trna synthetase, beta subunit protein [Xanthomonas albilineans] Length = 716 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 192/748 (25%), Positives = 330/748 (44%), Gaps = 85/748 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLYLKG 58 M L+E+ +EE+P + A+ L +I L + G+ + + TP RL + L G Sbjct: 3 MHPLLIELGTEELPVKALPGLAQALFDGVIAGLDKRGIAVERGDAKPLSTPRRLAVLLPG 62 Query: 59 LSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ PE+ E LGP G KA++GF G+ + + + KG+ ++ Sbjct: 63 VAAEQPEQRAEVLGPYLNIALDADGQPTKALEGFAAKAGIAWTALERTR--DAKGERFVH 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P +L I+ AI +P PK MRW + RP++ ++ +L Sbjct: 121 RAVHPGARTATLLPDILREAIAAMPIPKPMRWGDHDYG-----FARPVQWLVLLL----- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++ L + + GHRF P+ + Y+ L+ A VL+DP+ RR I+ + Sbjct: 171 GNEVVPAHLLGVQADRHSRGHRFLHDAPVTLAQPGDYVAALQAAQVLVDPDVRRARIVAE 230 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A G +D L +++ LVEW + F+ +L +P+E + T+++NQK F Sbjct: 231 VEQAARQAGGRARIAEDNLAQVVNLVEWPSAVLCRFEPAFLAVPQEALIETMESNQKFFP 290 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI ++NI + D +G RV+ R DA F+ D Sbjct: 291 VLDADGKLTEHFIGIANIVSRDVAEVA-KGYERVIRPRFADAKFFFDED----------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L + L+ L V + AK+G+ ++V R+ L + IA + AD A Sbjct: 339 ---------LKQGLEAMGVGL--AGVTYQAKLGSLADKVRRVAALAEAIAAQVGADPAQA 387 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSK DL + +V EFPELQG G+ YA E AI+E +PR +++ + Sbjct: 388 RRAAELSKNDLQSRMVNEFPELQGIAGRYYASAAGEPRDIALAIDEAYQPRFAGDDIALS 447 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ---- 527 + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ LS+ Sbjct: 448 PLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDVDLSEALVA 507 Query: 528 ----------------------------------FIEDQNLILFFHDRLKLYLHDRDIRH 553 Q + F DRL+ Y D+ + Sbjct: 508 AAKLLPWEQLVRKAELPNKLPNEHPTSEIDSIQYAQLAQEVYDFILDRLRGYYADKGVPA 567 Query: 554 DLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE 613 A+ + +L + I + F + + + + KRI IL E I + Sbjct: 568 THFNAVAELKLASLYDVDRRIDAIGTFAALPEADALAAANKRIRNILRKAE---DAIPAQ 624 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 + L AE+ L + ++ + Y + ++L + ++ FFD V+VN + Sbjct: 625 VDAALLREPAERALAEAVEAAIVETDGTLRQRDYVSVLNVLARLRPQVDAFFDGVMVNAE 684 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKI 701 +R NRL+LL+ + + V ++ + Sbjct: 685 APALRGNRLALLKRLGERLGSVAAIEHL 712 >gi|161507648|ref|YP_001577602.1| glycyl-tRNA synthetase subunit beta [Lactobacillus helveticus DPC 4571] gi|172048290|sp|A8YVM4|SYGB_LACH4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|160348637|gb|ABX27311.1| Glycyl-tRNA synthetase beta chain [Lactobacillus helveticus DPC 4571] gi|328465880|gb|EGF37063.1| glycyl-tRNA synthetase subunit beta [Lactobacillus helveticus MTCC 5463] Length = 687 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 205/733 (27%), Positives = 346/733 (47%), Gaps = 79/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EEIPA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEIPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T I + KG Y V Sbjct: 61 AEKQDDIDEVKKGPAKKITQDADGNWTKAAQGFARGQGMTTDD---IYFEELKGTEYAYV 117 Query: 113 -LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++K + D+L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 118 HVQKEGKKASDILLGM-SDIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSD-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + +I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 170 ---VIPVKILDITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 226 MNELVKKNHWQIKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFE 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L N FI V N D I+ GN +V+ ARL+DA F+ D+ Sbjct: 286 VYDENGKLINHFIAVRNG-NKDYLDNIISGNEKVLVARLDDAQFFYDEDR---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 PL + RL +V FH KIG+ E++ R+R++G +A+ D Sbjct: 335 ----------KYPLSHFVDRLK--NVSFHDKIGSMAEKIQRVRMIGDYLAKRWDLPENVV 382 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P + Sbjct: 383 TDFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT+I F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSVADKIDTIITFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 -------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 +Q + F DR+K YL ++D+++A+L + Sbjct: 503 LPEIINMLGGVTPAKLPKGDSEQEIADFIRDRVKQYLQKNKFKYDIVDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL + + +++ + +E LYA Sbjct: 563 ILAAANVLQLHHDDEEFKPVVESLTRINNILKKAKFNGK---VDVDESLFVDNSETELYA 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +Q + + + + I+ +F+ ++ D V++NRL+ L + Sbjct: 620 -------RVQNLQNIESLADLYQGFVHLQPVIDQYFEANMIMDKDENVKNNRLAQLYAVS 672 Query: 690 NIILIVINVQKIV 702 + + ++ K+V Sbjct: 673 ELADRLGDLSKLV 685 >gi|261400609|ref|ZP_05986734.1| glycyl-tRNA synthetase, beta subunit [Neisseria lactamica ATCC 23970] gi|269209693|gb|EEZ76148.1| glycyl-tRNA synthetase, beta subunit [Neisseria lactamica ATCC 23970] Length = 687 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 209/710 (29%), Positives = 349/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ + Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAVEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I + K DVY + + + ++L+ Sbjct: 76 GPAVANAVKDGVPTKALEGFARGAGAKIEDLTII--NDGKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSSGEITIENADSYAEQMREQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|256956684|ref|ZP_05560855.1| glycyl-tRNA synthetase [Enterococcus faecalis DS5] gi|256947180|gb|EEU63812.1| glycyl-tRNA synthetase [Enterococcus faecalis DS5] gi|315035616|gb|EFT47548.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0027] Length = 694 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 351/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSESFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|229549421|ref|ZP_04438146.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis ATCC 29200] gi|255972125|ref|ZP_05422711.1| glycyl-tRNA synthetase [Enterococcus faecalis T1] gi|300860883|ref|ZP_07106970.1| glycine--tRNA ligase, beta subunit [Enterococcus faecalis TUSoD Ef11] gi|307277160|ref|ZP_07558264.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2134] gi|312953486|ref|ZP_07772326.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0102] gi|229305658|gb|EEN71654.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis ATCC 29200] gi|255963143|gb|EET95619.1| glycyl-tRNA synthetase [Enterococcus faecalis T1] gi|295113460|emb|CBL32097.1| glycyl-tRNA synthetase beta chain [Enterococcus sp. 7L76] gi|300849922|gb|EFK77672.1| glycine--tRNA ligase, beta subunit [Enterococcus faecalis TUSoD Ef11] gi|306506090|gb|EFM75256.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2134] gi|310628695|gb|EFQ11978.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0102] gi|315146682|gb|EFT90698.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4244] gi|315152153|gb|EFT96169.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0031] gi|315159084|gb|EFU03101.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0312] Length = 694 Score = 558 bits (1439), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 351/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|315032900|gb|EFT44832.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0017] Length = 694 Score = 558 bits (1438), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 350/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|307290542|ref|ZP_07570454.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0411] gi|306498397|gb|EFM67902.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0411] Length = 694 Score = 558 bits (1438), Expect = e-156, Method: Composition-based stats. Identities = 201/733 (27%), Positives = 350/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + I ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKIGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|221310449|ref|ZP_03592296.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|221314772|ref|ZP_03596577.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319695|ref|ZP_03600989.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. JH642] gi|221323972|ref|ZP_03605266.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. SMY] gi|255767576|ref|NP_390404.2| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|251757345|sp|P54381|SYGB_BACSU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225185204|emb|CAB14455.2| glycyl-tRNA synthetase (beta subunit) [Bacillus subtilis subsp. subtilis str. 168] Length = 679 Score = 558 bits (1438), Expect = e-156, Method: Composition-based stats. Identities = 199/720 (27%), Positives = 341/720 (47%), Gaps = 61/720 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR +++ L L G LKE+ + + ++ + TP RL +++K Sbjct: 1 MSKQDLLLEIGLEEMPARFLNESMVQLGDKLTGWLKEKNITHGEVKLFNTPRRLAVFVKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G K+ K + Sbjct: 61 VAEKQDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQGANVED--LYIKEVKGIEYVFV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +L + I + +PK+MRW +IRP+K I+ + + Sbjct: 119 QKFQAGQETKSLLPE-LSGLITSLHFPKNMRWGNED-----LRYIRPIKWIVALFGQD-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + G T GHRF + ++S Y L+ V+ DP R+ I + Sbjct: 171 ---VIPFSITNVESGRTTQGHRFLGHE-VSIESPSAYEEQLKGQHVIADPSVRKQMIQSQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 227 LETMAAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + + G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 287 VKDKNGDLLPHFITVRNG-NSHAIENVARGNEKVLRARLSDASFFYKEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 +D + +L+ ++VFH ++G+ ++V R+ + +K+A + AD Sbjct: 338 ------------NIDANVKKLE--NIVFHEELGSLADKVRRVTSIAEKLAVRLQADEDTL 383 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 V RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR Sbjct: 384 KHVKRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGET 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ V++ADKLDT+ +F++I P+GS+DPY LRR GI+ I+L+ I + Sbjct: 444 PSTFTGAVVAMADKLDTIASFFSIGVIPTGSQDPYGLRRQASGIVAILLDRNWGISFEEL 503 Query: 529 ------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 ++ L+ FF RLK L+ IRHD+I+A+L + + + L + Sbjct: 504 LTFVQTDKENELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKLG 563 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + ++ + R+ I + +I P E E +L+ ++QE+ Sbjct: 564 APGFKETAEALGRVISISKKG------VRGDIQPDLFENEYEAKLFDAYQTAKQNLQENF 617 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ ++ Sbjct: 618 SKKDYEAALASLAALKEPIDAYFDHTMVIADNESLKANRLAQMVSLADEIKSFANMNALI 677 >gi|187927503|ref|YP_001897990.1| glycyl-tRNA synthetase subunit beta [Ralstonia pickettii 12J] gi|309779795|ref|ZP_07674550.1| glycyl-tRNA synthetase, beta subunit [Ralstonia sp. 5_7_47FAA] gi|238691845|sp|B2UFN5|SYGB_RALPJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|187724393|gb|ACD25558.1| glycyl-tRNA synthetase, beta subunit [Ralstonia pickettii 12J] gi|308921372|gb|EFP67014.1| glycyl-tRNA synthetase, beta subunit [Ralstonia sp. 5_7_47FAA] Length = 697 Score = 558 bits (1438), Expect = e-156, Method: Composition-based stats. Identities = 210/718 (29%), Positives = 346/718 (48%), Gaps = 66/718 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G +P++ E+ Sbjct: 14 PPKALARLGEAFARGLFDGLSAQGLLEEGAAVEGFATPRRLAASITGARRTAPDRELREK 73 Query: 71 LGP------RVGAGK----KAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRL 119 + P G K + ++ G++ I+ +++ P K + + Sbjct: 74 VLPVTIAFDAEGKPAAPLVKKLAALAKTVGVEVIAAESLERGPDGKAEALFYRYTARGAV 133 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L+T + I +P PK M + + ++RP ++ +L +E +I + Sbjct: 134 LADGLQTALSQTIANLPIPKVMTYQRPNG--ENVQFVRPAHKLIALLDSE-----VIPVS 186 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASA 238 + GN+T GHRF + I +Q Y LE V+ R+ AI + + A A Sbjct: 187 AFGLQSGNVTLGHRFLSAGEIVIQDAASYASTLESQGKVIAGYGKRKEAIRAELLKTAGA 246 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +V + LL+E+ LVEW V+ F++ +L +P+E + LT++TNQK F +G Sbjct: 247 D--TVVMPEALLDEVNALVEWPVVYPCHFEEAFLAVPQECLILTMQTNQKYFALTDAQGH 304 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSNI A+D AI+QGN RVV RL DA F+++D+ Sbjct: 305 LRNRFLIVSNI-ATDTPEAIIQGNERVVRPRLADARFFFEQDK----------------- 346 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 KPL R+ L VV+H KIGTQ ERVSR++ + ++A+ + ADVA R +L+ Sbjct: 347 ---KKPLADRVPLLSR--VVYHNKIGTQLERVSRLQAIAGQLAEKLGADVAHASRGALLA 401 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P+ V+ Sbjct: 402 KADLLTDMVGEFPELQGTMGTYYARHDGEPDDVALACSEHYQPRFAGDALPSTATGTVVA 461 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF---------- 528 LADKL+TL+ W I +P+G KDP+ALRR LGI+R+++E + + + Sbjct: 462 LADKLETLVGIWGIGLQPTGEKDPFALRRHALGILRMLIEKPLALTIDDALQIAAASFDG 521 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + F +DRL+ YL D+ + +EA++ L IV ++ + F + Sbjct: 522 IAAVKPNLAAITDFLYDRLRGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAAL 581 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KRI IL KK + P L +AE+ L+ + + ++ Sbjct: 582 PQAEALAAANKRITNIL----KKTDVAIGAVQPPLLKEDAERALHQSVVSAEPQVHDAFA 637 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L + E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 638 RGDFTTALKTLAGLREAVDTFFDGVMVMADDTALRDNRLALLAELHGLMNRVADISKL 695 >gi|315166399|gb|EFU10416.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1341] Length = 694 Score = 558 bits (1438), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 350/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEVKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|227878691|ref|ZP_03996605.1| glycyl-tRNA synthetase beta subunit [Lactobacillus crispatus JV-V01] gi|256843285|ref|ZP_05548773.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 125-2-CHN] gi|256850358|ref|ZP_05555786.1| glycyl-tRNA synthetase subunit beta [Lactobacillus crispatus MV-1A-US] gi|262046494|ref|ZP_06019456.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus MV-3A-US] gi|293380132|ref|ZP_06626219.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 214-1] gi|312978176|ref|ZP_07789920.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus CTV-05] gi|227861706|gb|EEJ69311.1| glycyl-tRNA synthetase beta subunit [Lactobacillus crispatus JV-V01] gi|256614705|gb|EEU19906.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 125-2-CHN] gi|256712755|gb|EEU27748.1| glycyl-tRNA synthetase subunit beta [Lactobacillus crispatus MV-1A-US] gi|260573365|gb|EEX29923.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus MV-3A-US] gi|290923302|gb|EFE00218.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 214-1] gi|310894894|gb|EFQ43964.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus CTV-05] Length = 687 Score = 558 bits (1438), Expect = e-156, Method: Composition-based stats. Identities = 207/733 (28%), Positives = 347/733 (47%), Gaps = 79/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEMPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T I + KG Y V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDQDGNWTKAAQGFARGQGMTTDD---IYFEELKGTEYAYV 117 Query: 113 -LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++K + D+L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 118 HVQKEGKKASDILLGM-SDIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSD-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + +I G T GHRF + + + D Y L++ V+ D + R++ I+ Sbjct: 170 ---VIPVKILDITAGRKTQGHRFLG-DSVVLANADDYEDALKDQFVIADADERKDMIVRQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 226 MNELVKKNNWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLKIPDEVLITSMKDNQRYFE 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 286 VYDETGKLINHFIAVRNG-NKDYLDNVISGNEKVLVARLDDAQFFYDEDR---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 PL + RL +V FH KIG+ E++ R+R++G +A+ D Sbjct: 335 ----------KYPLSHFVDRLK--NVSFHDKIGSMAEKMQRVRMIGDYLAKRWDLPENVV 382 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P + Sbjct: 383 KDFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 -------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 DQ + F DR+K YL D ++D+I+A+L + Sbjct: 503 LPEIISMLNGVTPAKLPKSDADQEIADFIRDRVKQYLQKNDFKYDIIDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL + K+ + + +EK LYA Sbjct: 563 ILAAATVLQLHHDDEEFKPVVESLTRIDNILKKAKFKS---NTAVDESLFDDNSEKELYA 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +Q D + + + I+ +F+ ++ D +V++NRL+ L + Sbjct: 620 -------GVQNLQDIESLADLYQGFVQLQPVIDQYFETNMIMAKDEKVKNNRLAQLYAVN 672 Query: 690 NIILIVINVQKIV 702 + + ++ K+V Sbjct: 673 ELADRLGDLSKLV 685 >gi|309379539|emb|CBX21905.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 687 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 212/710 (29%), Positives = 348/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ + Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAELTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V R+ AI A + + Sbjct: 184 GNKTLGHRFLSNGEITIENADSYAEQMREQGKVEASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLNQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVVAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E+ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVDESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|29376901|ref|NP_816055.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis V583] gi|227553938|ref|ZP_03983985.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis HH22] gi|255975192|ref|ZP_05425778.1| glycyl-tRNA synthetase [Enterococcus faecalis T2] gi|257087438|ref|ZP_05581799.1| glycyl-tRNA synthetase [Enterococcus faecalis D6] gi|307285811|ref|ZP_07565945.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0860] gi|81838860|sp|Q831U3|SYGB_ENTFA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|29344366|gb|AAO82125.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis V583] gi|227176924|gb|EEI57896.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis HH22] gi|255968064|gb|EET98686.1| glycyl-tRNA synthetase [Enterococcus faecalis T2] gi|256995468|gb|EEU82770.1| glycyl-tRNA synthetase [Enterococcus faecalis D6] gi|306502572|gb|EFM71839.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0860] gi|315025406|gb|EFT37338.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2137] gi|315574361|gb|EFU86552.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0309B] gi|315580164|gb|EFU92355.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0309A] Length = 694 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 350/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFDV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|256763100|ref|ZP_05503680.1| glycyl-tRNA synthetase [Enterococcus faecalis T3] gi|256684351|gb|EEU24046.1| glycyl-tRNA synthetase [Enterococcus faecalis T3] gi|315173670|gb|EFU17687.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1346] Length = 694 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 351/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|257084566|ref|ZP_05578927.1| glycyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|307287714|ref|ZP_07567757.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0109] gi|256992596|gb|EEU79898.1| glycyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|306501452|gb|EFM70755.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0109] gi|315164813|gb|EFU08830.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1302] Length = 694 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 350/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFDV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|227519875|ref|ZP_03949924.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0104] gi|229545173|ref|ZP_04433898.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1322] gi|256853767|ref|ZP_05559132.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis T8] gi|256963574|ref|ZP_05567745.1| glycyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|257079639|ref|ZP_05574000.1| glycyl-tRNA synthetase [Enterococcus faecalis JH1] gi|294780919|ref|ZP_06746273.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis PC1.1] gi|307270837|ref|ZP_07552124.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4248] gi|307271513|ref|ZP_07552785.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0855] gi|312905129|ref|ZP_07764250.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0635] gi|227072669|gb|EEI10632.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0104] gi|229309718|gb|EEN75705.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1322] gi|256710710|gb|EEU25753.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis T8] gi|256954070|gb|EEU70702.1| glycyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|256987669|gb|EEU74971.1| glycyl-tRNA synthetase [Enterococcus faecalis JH1] gi|294452045|gb|EFG20493.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis PC1.1] gi|306511785|gb|EFM80783.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0855] gi|306512750|gb|EFM81395.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4248] gi|310631519|gb|EFQ14802.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0635] gi|315030215|gb|EFT42147.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4000] Length = 694 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 350/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|295693060|ref|YP_003601670.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus ST1] gi|295031166|emb|CBL50645.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus ST1] Length = 687 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 207/733 (28%), Positives = 347/733 (47%), Gaps = 79/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEMPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T I + KG Y V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDQDGNWTKAAQGFARGQGMTTDD---IYFEELKGTEYAYV 117 Query: 113 -LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++K + D+L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 118 HVQKEGKKASDILLGM-SDIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSD-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + +I G T GHRF + + + D Y L++ V+ D + R++ I+ Sbjct: 170 ---VIPVKILDITAGRKTQGHRFLG-DSVVLANADDYEDALKDQFVIADADERKDMIVRQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 226 MNELVKKNNWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLKIPDEVLITSMKDNQRYFE 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 286 VYDETGKLINHFIAVRNG-NKDYLDNVISGNEKVLVARLDDAQFFYDEDR---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 PL + RL +V FH KIG+ E++ R+R++G +A+ D Sbjct: 335 ----------KYPLSHFVDRLK--NVSFHDKIGSMAEKMQRVRMIGDYLAKRWDLPENVV 382 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P + Sbjct: 383 KDFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 -------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 DQ + F DR+K YL D ++D+I+A+L + Sbjct: 503 LPEIISMLNGVTPAKLPKSDADQEIADFVRDRVKQYLQKNDFKYDIIDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL + K+ + + +EK LYA Sbjct: 563 ILAAANVLQLHHDDEEFKPVVESLTRIDNILKKAKFKS---NTAVDESLFDDNSEKELYA 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +Q D + + + I+ +F+ ++ D +V++NRL+ L + Sbjct: 620 -------GVQNLQDIESLADLYQGFVQLQPVIDQYFETNMIMAKDEKVKNNRLAQLYAVN 672 Query: 690 NIILIVINVQKIV 702 + + ++ K+V Sbjct: 673 ELADRLGDLSKLV 685 >gi|288574811|ref|ZP_06393168.1| glycyl-tRNA synthetase, beta subunit [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570552|gb|EFC92109.1| glycyl-tRNA synthetase, beta subunit [Dethiosulfovibrio peptidovorans DSM 11002] Length = 688 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 208/720 (28%), Positives = 345/720 (47%), Gaps = 59/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + +LEI +EEIP+R +A +L+ I E + N+ Y TP RL L +K L+ Sbjct: 5 NLILEIGTEEIPSRFMPRALRELADIASAEFSEARISCGNIETYGTPRRLVLSIKKLNSR 64 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G +A GF +S ++ K+D AV+ + Sbjct: 65 QDDLSEEFKGPAWKSAFDGNGTPTRAAIGFAKSKNIEVEDLE--KRDVNGIPYVFAVVNQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 D+L ++ + ++ +PK+M W ++ + RP++ ILC+L +K+ Sbjct: 123 KGGQTLDLLPDMLCRIVNRLVFPKNMYW-----KKTSVRFARPIRWILCLL-----DDKV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + +L I G I+ GHRF + V Y+ L + V++D + R+ +L+ L Sbjct: 173 VSFELNGIKSGQISRGHRFMGAPSVSVSKESSYMEKLYDNYVIVDQKKRKEKMLSAIAIL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + + +D DL+EE + LVE+ F G FDKKYL LPEE++ T+K +QK F R Sbjct: 233 EKEMDGTIDKDPDLIEENLFLVEYPVPFYGKFDKKYLELPEEVLVTTMKHHQKYFPVRDH 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+ VSN +A + IV+GN RV+ ARLEDA FW D Sbjct: 293 SGKLMPYFVGVSNNRAVNMN-VIVEGNQRVLRARLEDASFFWNEDSRE------------ 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA--LVDR 413 PL ++ RL VV+ K+G+ ++V L + + ++ + L++R Sbjct: 340 --------PLASKLDRLKT--VVYQEKLGSVYDKVMITVDLVRSLTSMLGLEEHIKLIER 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK+DL T +V EFPELQG +G+EYA+ E+ AI E P+ + P++ I Sbjct: 390 AAILSKSDLVTNMVYEFPELQGIMGREYALKDGEDPRVAMAIYEQYLPKSAGDETPSDVI 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 + L++++ ++ + + +PSGS+DPY LRRA + II +D+ L +F++ Sbjct: 450 GAVLGLSERVFNMVGAFKMGFRPSGSQDPYGLRRAVRCVNEIIWSLSLDVNLDEFLKEAA 509 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + LI F RL + L ++D HDL E + L + ++ L Sbjct: 510 HSLQLEKEPMEELISFIRQRLLIQLKEKDFSHDLAELAVSVTGGRPLQALRFLESLKAVQ 569 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + +A R+ ILA K E + LL+ AEK L + + ++ Sbjct: 570 EEQWFINLVTAAVRVQNILA---KNGEERGSSVEVAKLLMPAEKDLAEAVESCSRTVCKA 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ + + + L + I FFD V+V +D VR NRL+LL +++ + N+ ++ Sbjct: 627 VEEDNWDLLMESLSRLSPSITSFFDDVMVMDEDSTVRANRLALLGECEDLFREIGNLSRL 686 >gi|315161676|gb|EFU05693.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0645] Length = 694 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 350/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEVKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEALNQDVEKYGVLLKEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|257416645|ref|ZP_05593639.1| glycyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|257421951|ref|ZP_05598941.1| glycyl-tRNA synthetase subunit beta [Enterococcus faecalis X98] gi|257158473|gb|EEU88433.1| glycyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] gi|257163775|gb|EEU93735.1| glycyl-tRNA synthetase subunit beta [Enterococcus faecalis X98] gi|315155340|gb|EFT99356.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0043] Length = 694 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 201/733 (27%), Positives = 350/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + E+ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLEVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|321312008|ref|YP_004204295.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis BSn5] gi|320018282|gb|ADV93268.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis BSn5] Length = 679 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 200/720 (27%), Positives = 341/720 (47%), Gaps = 61/720 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR +++ L L G LKE+ + + ++ + TP RL +++K Sbjct: 1 MSKQDLLLEIGLEEMPARFLNESMVQLGDKLTGWLKEKNITHGEVKLFNTPRRLAVFVKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G K+ K + Sbjct: 61 VAEKQDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQGANVED--LYIKEVKGIEYVFV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +L + I + +PK+MRW +IRP+K I+ + + Sbjct: 119 QKFQAGQETKSLLPE-LSGLITSLHFPKNMRWGNED-----LRYIRPIKWIVALFGQD-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + G T GHRF + ++S Y L+E V+ DP R+ I + Sbjct: 171 ---VIPFSITNVESGRTTQGHRFLGHE-VSIESPSAYEEQLKEQHVIADPSVRKQMIQSQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 227 LETMAAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + + G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 287 VKDKNGDLLPHFITVRNG-NSHAIENVARGNEKVLRARLSDASFFYKEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 +D + +L+ ++VFH ++G+ ++V R+ + +K+A + AD Sbjct: 338 ------------NIDANVKKLE--NIVFHEELGSLADKVRRVTSIAEKLAVRLQADEDTL 383 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 V RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR Sbjct: 384 KHVKRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGET 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ V++ADKLDT+ +F++I P+GS+DPY LRR GI+ I+L+ I + Sbjct: 444 PSTFTGAVVAMADKLDTIASFFSIGVIPTGSQDPYGLRRQASGIVAILLDRNWGISFEEL 503 Query: 529 IEDQ------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + L+ FF RLK L+ IRHD+I+A+L + + + L + Sbjct: 504 LTFVQTDKEIELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKLG 563 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + ++ + R+ I + +I P E E +L+ ++QE+ Sbjct: 564 APGFKETAEALGRVISISKKG------VRGDIQPDLFENEYEAKLFDAYQTAKQNLQENF 617 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ ++ Sbjct: 618 SKKDYEAALASLAALKEPIDAYFDHTMVIADNEALKANRLAQMVSLADEIKSFANMNALI 677 >gi|260101318|ref|ZP_05751555.1| glycyl-tRNA synthetase [Lactobacillus helveticus DSM 20075] gi|260084903|gb|EEW69023.1| glycyl-tRNA synthetase [Lactobacillus helveticus DSM 20075] Length = 687 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 204/733 (27%), Positives = 345/733 (47%), Gaps = 79/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EEIPA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEIPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T I + KG Y V Sbjct: 61 AEKQDDIDEVKKGPAKKITQDADGNWTKAAQGFARGQGMTTDD---IYFEELKGTEYAYV 117 Query: 113 -LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++K + D+L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 118 HVQKEGKKASDILLGM-SDIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSD-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + +I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 170 ---VIPVKILDITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 226 MNELVKKNHWQIKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFE 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L N FI V N D I+ GN +V+ ARL+DA F+ D+ Sbjct: 286 VYDENGKLINHFIAVRNG-NKDYLDNIISGNEKVLVARLDDAQFFYDEDR---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 PL + L +V FH KIG+ E++ R+R++G +A+ D Sbjct: 335 ----------KYPLSHFVDPLK--NVSFHDKIGSMAEKIQRVRMIGDYLAKRWDLPENVV 382 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P + Sbjct: 383 TDFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT+I F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSVADKIDTIITFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 -------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 +Q + F DR+K YL ++D+++A+L + Sbjct: 503 LPEIINMLGGVTPAKLPKGDSEQEIADFIRDRVKQYLQKNKFKYDIVDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL + + +++ + +E LYA Sbjct: 563 ILAAANVLQPHHDDEEFKPVVESLTRINNILKKAKFNGK---VDVDESLFVDNSETELYA 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +Q + + + + I+ +F+ ++ D V++NRL+ L + Sbjct: 620 -------RVQNLQNIESLADLYQGFVHLQPVIDQYFEANMIMDKDENVKNNRLAQLYAVS 672 Query: 690 NIILIVINVQKIV 702 + + ++ K+V Sbjct: 673 ELADRLGDLSKLV 685 >gi|161869283|ref|YP_001598450.1| glycyl-tRNA synthetase subunit beta [Neisseria meningitidis 053442] gi|229558565|sp|A9M127|SYGB_NEIM0 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|161594836|gb|ABX72496.1| glycyl-tRNA synthetase beta subunit [Neisseria meningitidis 053442] Length = 687 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 213/710 (30%), Positives = 349/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLVVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALEGQARRLNASVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|291484971|dbj|BAI86046.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. natto BEST195] Length = 679 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 201/720 (27%), Positives = 342/720 (47%), Gaps = 61/720 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR +++ L L G LKE+ + + ++ + TP RL +++KG Sbjct: 1 MSKQDLLLEIGLEEMPARFLNESMVQLGDKLTGWLKEKNITHGEVKLFNTPRRLAVFVKG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G K+ K + Sbjct: 61 VAEKQDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQGANVED--LYIKEVKGIEYVFV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +L + I + +PK+MRW +IRP+K I+ + + Sbjct: 119 QKFQAGQETKSLLPE-LSGLITSLHFPKNMRWGNED-----LRYIRPIKWIVALFGQD-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + G T GHRF + ++S Y L+E V+ DP R+ I + Sbjct: 171 ---VIPFSITNVESGRTTQGHRFLGHE-VSIESPSAYEEQLKEQHVIADPSVRKQMIQSQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 227 LEAMAAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + + G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 287 VKDKNGDLLPHFITVRNG-NSHAIENVARGNEKVLRARLSDASFFYKEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 +D + +L+ ++VFH ++G+ ++V R+ + +K+A + AD Sbjct: 338 ------------NIDANVKKLE--NIVFHEELGSLADKVRRVTSIAEKLAVRLQADEDTL 383 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 V RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR Sbjct: 384 KHVKRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGET 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ V++ADKLDT+ +F++I P+GS+DPY LRR GI+ I+L+ I + Sbjct: 444 PSTFTGAVVAMADKLDTIASFFSIGVIPTGSQDPYGLRRQASGIVAILLDRNWGISFEEL 503 Query: 529 IEDQ------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + L+ FF RLK L+ IRHD+I+A+L + + + L + Sbjct: 504 LTFVQTDKEIELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKLG 563 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + ++ + R+ I + +I P E E +L+ ++QE+ Sbjct: 564 APGFKETAEALGRVISISKKG------VRGDIQPDLFENEYEAKLFDAYQTAKQNLQENF 617 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ ++ Sbjct: 618 SKKDYEAALASLAALKEPIDAYFDHTMVIADNESLKANRLAQMVSLADEIKSFANMNALI 677 >gi|312899836|ref|ZP_07759155.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0470] gi|311293086|gb|EFQ71642.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0470] Length = 694 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 351/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKSWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|282858171|ref|ZP_06267366.1| glycyl-tRNA synthetase, beta subunit [Pyramidobacter piscolens W5455] gi|282584093|gb|EFB89466.1| glycyl-tRNA synthetase, beta subunit [Pyramidobacter piscolens W5455] Length = 685 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 203/720 (28%), Positives = 341/720 (47%), Gaps = 60/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D +LEI +EEIP+R A D++ + + + + TP RL L ++ ++ Sbjct: 4 DLILEIGTEEIPSRFMPSALRDIAQYAEEEFAAQRLGHGRIEVMGTPRRLVLLVRSVAER 63 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G +A +GF RS GL ++ D AV+ Sbjct: 64 QADLSEEHKGPTWKSAFDGTGTPTRAAEGFARSKGLAVEQLES--RNVNGVDYAFAVINH 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L ++ I ++ +PK+M W S + RP++ LC++ A+ + Sbjct: 122 KGGAADALLPDMMKRIISRIVFPKNMYW-----YDSTVRFARPIRWFLCLIGAD-----V 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ +L + G T GHRF ++V+S D Y+ + + V++D + R + + Sbjct: 172 VEFELNGMKSGRTTCGHRFMGAPSVEVESSDDYLTVMYDNWVIVDQKKREEKMRAAIAGI 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + + D L++E + LVE+ F GSFD+KYL +PEE++ ++K NQK F Sbjct: 232 EKELDGAVELDPSLVQENLYLVEYPVPFYGSFDRKYLEIPEEVLTTSMKDNQKYFAVHDH 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L CF+ VSN + + +GN RV+ ARLEDA FWK D Sbjct: 292 SGKLMPCFVGVSNNLVPNM-ELVREGNERVLRARLEDAAFFWKED--------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVALVDR 413 L +PL R+ L +V++ K+G+ ++ + + +KI L+ DV LV+R Sbjct: 336 -----LKRPLSARVEDLK--NVIYQEKLGSVYDKTMEMVKISRKICDLLGNKDDVKLVER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A LSKADL T +V EF ELQG +G+EYA+ E+ AI E P +P++ I Sbjct: 389 AAYLSKADLVTGMVGEFSELQGIMGREYALKNGEDPRVAKAIAEQYMPTAAGNELPSDVI 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK-----------ID 522 V +A++ ++ + + +P+ S+DPY LRRA I I+ + I Sbjct: 449 GAVVGIAERAFNMVGAYKLGFQPTRSQDPYGLRRAIRCINEILWGLRLDLDLEALLAFIA 508 Query: 523 IPLSQFIED-QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 L E +L+ F R + L +++ H+LIE L L + L+ E Sbjct: 509 QDLEVGGEALSSLLDFIRQRTLIQLKEKEYGHELIELALSVTGSRPLQTLYLLGAFAEVK 568 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 K + SA R+ ILA E +S + P + AEK LYA +++ ++ + Sbjct: 569 QEDWFTKLVNSAVRVKNILAKAE----GVSSSVDPSLCVKAAEKDLYAAVNEAEKPVEAA 624 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ + ++L + + FFD V+V +D VR NRL+LL + +N+ + V ++ K+ Sbjct: 625 LRKNDWNGLMNVLAQLSPAVSAFFDDVMVMDEDAAVRANRLALLSHCQNLFMRVGDLSKV 684 >gi|269962698|ref|ZP_06177043.1| glycyl-tRNA synthetase beta subunit [Vibrio harveyi 1DA3] gi|269832621|gb|EEZ86735.1| glycyl-tRNA synthetase beta subunit [Vibrio harveyi 1DA3] Length = 688 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 196/703 (27%), Positives = 326/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R + ++ D KG+ L Sbjct: 61 ADSQSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCDITVDQAERMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 VSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|325956925|ref|YP_004292337.1| glycyl-tRNA synthetase subunit beta [Lactobacillus acidophilus 30SC] gi|325333490|gb|ADZ07398.1| glycyl-tRNA synthetase subunit beta [Lactobacillus acidophilus 30SC] Length = 687 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 205/733 (27%), Positives = 348/733 (47%), Gaps = 79/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEMPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFATPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T I + KG Y V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGMTTDD---IYFEELKGTEYAYV 117 Query: 113 -LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++K + D+L + I+ + +P MRW + F ++RP+ ++ + + Sbjct: 118 HVQKEGKKATDILLGM-SDIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGGD-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++ + + +I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 170 ---VVPVKILDITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 226 MNELVKENHWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFE 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 286 VYDENGKLINHFIAVRNG-NKDYLDNVISGNEKVLVARLDDAQFFYDEDR---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 PL + RL +V FH KIG+ E++ R+R++G +A+ D Sbjct: 335 ----------KYPLSHFVDRLK--NVSFHDKIGSVAEKMQRVRMIGDYLAKRWDLPENVV 382 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P + Sbjct: 383 KDFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 -------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 DQ + F DR+K YL + ++D+++A+L + Sbjct: 503 LPEIINMLNGVTPAKLPKGDADQEIADFIRDRVKQYLQKNNFKYDIVDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL + K +++I+ +EK LYA Sbjct: 563 ILAAANVLQLHHDDEEFKPVVESLTRIDNILKKAKFKG---NVKIAESLFDDNSEKELYA 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + + + + I+ +FD ++ D +V++NRL+ L + Sbjct: 620 GVENLQKV-------ESLADLYQGFVQLQPVIDQYFDANMIMAKDEKVKNNRLAQLFAVN 672 Query: 690 NIILIVINVQKIV 702 + + ++ K+V Sbjct: 673 ELADRLGDLSKLV 685 >gi|315038509|ref|YP_004032077.1| glycyl-tRNA synthetase subunit beta [Lactobacillus amylovorus GRL 1112] gi|312276642|gb|ADQ59282.1| glycyl-tRNA synthetase subunit beta [Lactobacillus amylovorus GRL 1112] gi|327183705|gb|AEA32152.1| glycyl-tRNA synthetase subunit beta [Lactobacillus amylovorus GRL 1118] Length = 687 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 205/733 (27%), Positives = 349/733 (47%), Gaps = 79/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEMPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFATPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T I + KG Y V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGMTTDD---IYFEELKGTEYAYV 117 Query: 113 -LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++K + D+L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 118 HVQKEGKKATDILLGM-SDIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSD-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++ + + +I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 170 ---VVPVKILDITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 226 MNELVKENHWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFE 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 286 VYDENGKLINHFIAVRNG-NKDYLDNVISGNEKVLVARLDDAQFFYDEDR---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 PL + RL +V FH KIG+ E++ R+R++G +A+ D Sbjct: 335 ----------KYPLSHFVDRLK--NVSFHDKIGSMAEKMQRVRMIGDYLAKRWDLPENVV 382 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P + Sbjct: 383 KDFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 -------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 DQ + F DR+K YL + ++D+++A+L + Sbjct: 503 LPEIINMLNGVTPAKLPKGDADQEIADFIRDRVKQYLQKNNFKYDIVDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL + K +++I+ +EK LYA Sbjct: 563 ILAAANVLQLHHDDEEFKPVVESLTRIDNILKKAKFKG---NVKIAESLFDDNSEKELYA 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + + + + I+ +FD ++ D +V++NRL+ L + Sbjct: 620 GVENLQKV-------ESLADLYQGFVQLQPVIDQYFDANMIMAKDEKVKNNRLAQLFAVS 672 Query: 690 NIILIVINVQKIV 702 + + ++ K+V Sbjct: 673 ELADRLGDLSKLV 685 >gi|298369572|ref|ZP_06980889.1| glycyl-tRNA synthetase, beta subunit [Neisseria sp. oral taxon 014 str. F0314] gi|298282129|gb|EFI23617.1| glycyl-tRNA synthetase, beta subunit [Neisseria sp. oral taxon 014 str. F0314] Length = 687 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 215/707 (30%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ + Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFTASVAEGLEKAQLIDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHRLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI + A + + Sbjct: 184 GNQTLGHRFLSGGEITIENADSYAAQMREQGKVVASFAERKVAIQTALNEQAGRLKATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTTFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTIKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E+ L + EK LYA D I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVDESLLQQDEEKALYAAAQDLQPKITAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLLNRLAEQMNAVADI 682 >gi|326318832|ref|YP_004236504.1| glycyl-tRNA synthetase subunit beta [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375668|gb|ADX47937.1| glycyl-tRNA synthetase, beta subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 708 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 354/733 (48%), Gaps = 64/733 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 P+ L+E++ EE+P + K + + +L+ L+ +G+ + Y +P RL ++ + Sbjct: 4 PNLLVELFVEELPPKALQKLGDAFAGVLLAQLQAQGLASAASRVTAYASPRRLAAHITEV 63 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLA 111 +P + +K + ++L P G A+ L + G + +++ P K + Sbjct: 64 APQAADKAVSQKLMPVTVGLDASGHATPALLKKLAALGADASAVPGLRRAPDGKAEALFL 123 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW----STTHSPISAFSWIRPLKSILCILV 167 + + L+ + ++ K+P PK MR+ ++ S++RP ++ + Sbjct: 124 DSTVRGATLSEGLQKALQESVAKLPIPKVMRYQLSSGCEQPGWTSVSFVRPAHGLVALHG 183 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRR 225 E + + + + GN T+GHRF A P+ ++S D Y + L E V+ RR Sbjct: 184 TEVL----LSVSVLGLTAGNATHGHRFEADVDPVVIRSADTYAQQLAEEGAVIAAFADRR 239 Query: 226 NAILNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 I A VG +ED LL+E+ LVE V + F+K++L +P+E + LT+ Sbjct: 240 AEIARQLQAAAERVGGGVRPIEDDALLDEVTALVERPNVLVCEFEKQFLDVPQECLILTM 299 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 K NQK F EG L + F++VSNI+ D +A+V GN RVV RL DA F+ +D+ Sbjct: 300 KANQKYFPLLDAEGRLTHRFLVVSNIRPDDA-SAVVGGNERVVRPRLADAKFFFDQDR-- 356 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 K L+ R+A L VV+H ++GTQGERV R+R + + IAQ Sbjct: 357 ------------------KKTLESRVASLSR--VVYHNQLGTQGERVERVRAIARAIAQQ 396 Query: 404 ID--ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 I D+A L+KADL T++V EFPELQG +G+ YA DAIE+H KP Sbjct: 397 IGDVELARHADQAAQLAKADLVTDMVGEFPELQGTMGRYYAQADGLPAEVADAIEDHYKP 456 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E ++ Sbjct: 457 RFAGDTLPRGDAGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVEKEL 516 Query: 522 DIPLSQFIE-------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + L + L F +DRL L ++ ++A+L L Sbjct: 517 PLDLETLLHSALPAFGDKIQDPTAPLADFIYDRLAGSLREQGYSAQEVDAVLALRPQRLA 576 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + F + + + KR+ IL KK ++ ++P L +AEK LY Sbjct: 577 LVAKQLAAVRAFAALPEAPALAAANKRVTNIL----KKAGDVDAHVNPDLLREQAEKDLY 632 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A + F Y L + P++ FFD V+VN ++ ++R NR LLQ + Sbjct: 633 AALQRFVPEADALFAAGDYTASLQTLAVLRAPVDAFFDDVMVNAEELDLRLNRQGLLQSL 692 Query: 689 KNIILIVINVQKI 701 + V ++ ++ Sbjct: 693 HVAMNRVADLSRL 705 >gi|257082015|ref|ZP_05576376.1| glycyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|256990045|gb|EEU77347.1| glycyl-tRNA synthetase [Enterococcus faecalis E1Sol] Length = 694 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 351/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDN-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|325131653|gb|EGC54359.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M6190] gi|325137516|gb|EGC60099.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis ES14902] Length = 686 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 207/710 (29%), Positives = 346/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 15 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 75 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 133 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 183 SNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 243 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 303 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 342 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 400 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIAAAVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 460 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 520 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 579 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 635 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 684 >gi|325135523|gb|EGC58141.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M0579] Length = 687 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 210/710 (29%), Positives = 348/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V R+ AI A + + Sbjct: 184 GNKTLGHRFLSNGEITIENADSYAEQMREQGKVEASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|256961299|ref|ZP_05565470.1| glycyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|293383583|ref|ZP_06629493.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis R712] gi|293387304|ref|ZP_06631860.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis S613] gi|312909479|ref|ZP_07768334.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis DAPTO 516] gi|256951795|gb|EEU68427.1| glycyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|291079095|gb|EFE16459.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis R712] gi|291083202|gb|EFE20165.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis S613] gi|311290152|gb|EFQ68708.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis DAPTO 516] Length = 694 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 350/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQVDVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|312880033|ref|ZP_07739833.1| glycyl-tRNA synthetase beta chain [Aminomonas paucivorans DSM 12260] gi|310783324|gb|EFQ23722.1| glycyl-tRNA synthetase beta chain [Aminomonas paucivorans DSM 12260] Length = 694 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 202/720 (28%), Positives = 338/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA E++ + L+ + + + Y TP RL LY++ L+ Sbjct: 9 DLLFEIGTEEIPAGFLSWGLEEIRRLGEEELQAARIPHGGILSYGTPRRLTLYVRSLASR 68 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + +E GP G KA GF RS + ++ AVL++ Sbjct: 69 QEDLVETVKGPLWAQAFDPNGHPTKAAAGFARSRQIPVEDLQM--REVDGVPYAFAVLKQ 126 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E ++ ++ ++++ +PK+M W + RP++ ++ + ++I Sbjct: 127 EGQETESLIPEVLQRILKRLVFPKNMYWQDP-----TVRFARPIRWLVALW-----GDQI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + L E+ T GHRF ++++ Y+ L + VL DP+ RR +L+ L Sbjct: 177 VPVTLGEVHSDRFTRGHRFLGKRNLEIREAKDYLEALFDEFVLADPQKRREKMLSGIASL 236 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 +G D DL+EE + LVE+ F GSFD +L +P E++ T+K +Q+ F R R Sbjct: 237 EKDMGAGADLDPDLVEENLNLVEYPVPFFGSFDPSFLDIPSEVLVTTMKKHQRYFPVRDR 296 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+ VSN QA+ + +GN RV+ ARL DA FW DQ Sbjct: 297 SGKLCPFFVGVSNNQAT-RMQVVREGNERVLRARLSDAAFFWAEDQ-------------- 341 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--ALVDR 413 L R+ L V++ ++G+ ++ R R L + + + +LVDR Sbjct: 342 ------KAGLSSRVEGLKT--VLYQERLGSVHQKSERARTLAIWLVESLGLGEIRSLVDR 393 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+KADL T +V EFPELQG +G+EYA + E A+ E PR + +PT+ + Sbjct: 394 AAFLAKADLLTNMVYEFPELQGVMGREYARREGEPDRVALALHEQYLPRFAGDRLPTDAV 453 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 V LAD+ DTL+ + +P+GS+DPY LRRA+ I I+ ++D+P+ Sbjct: 454 GALVGLADRADTLVAIHHVGLEPTGSQDPYGLRRASRCIDEILWGLELDVPVVDLFAKAG 513 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 Q + FF R + L ++ H ++ L+ L + L++ L E Sbjct: 514 ANLGASPETLQAVGDFFQQRQLVQLREKGYGHGMVSLALQCVGHRPLQTLRLLQVLEELK 573 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 A + +A R+ ILA ++ P L +AE+ L A +++ G ++E+ Sbjct: 574 GEAWFASLVTAAVRVRNILAK-----TPEGGDLDPSTLTCDAERGLLAALTECGPLVREA 628 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ LL + P+ FFD VLV D +VR NRL LL+ +++ + + + Sbjct: 629 VARYEWREVAQLLLRLEGPVTRFFDDVLVMDPDEKVRTNRLGLLRRAQDLFDAIGDFSYL 688 >gi|313669148|ref|YP_004049432.1| glycyl-tRNA synthetase beta subunit [Neisseria lactamica ST-640] gi|313006610|emb|CBN88076.1| putative glycyl-tRNA synthetase beta subunit [Neisseria lactamica 020-06] Length = 687 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 207/710 (29%), Positives = 345/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I + K DVY + + + ++L+ Sbjct: 76 GPAVANAVKDGVPTKALEGFARGAGAKIEDLTII--NDGKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + E V R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAAQMREQGKVEASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 L+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 ILVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|303327126|ref|ZP_07357568.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. 3_1_syn3] gi|302863114|gb|EFL86046.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. 3_1_syn3] Length = 698 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 203/732 (27%), Positives = 321/732 (43%), Gaps = 67/732 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI SEE+P+R +L L E G+ Y +R TP R + ++ L+ Sbjct: 1 MATFVLEIGSEELPSRFLAPEEAELRARFSTALDEAGLEYGAVRVMSTPRRAVVLVEDLN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P EK E GP GA KA++GF R+ GL + + +KG+ Sbjct: 61 PVQREKEEVIPGPPARVAYGPDGAPTKALEGFARTHGLSVAD--VFRLETEKGEYVAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R + +L I P I +P+ K MRW A ++ RP+ IL +L E Sbjct: 119 RTGGAAAKALLAGICPAVITSLPFAKRMRWGAY-----ALAYARPIHWILALL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDA 232 +++ DL + G T GHR H P V D Y+ ++ V LDP RR I+ Sbjct: 169 EVVPFDLGPVASGRETRGHRVHGSGPFSVAHADAYLEVAADSCAVTLDPARRRAVIVEGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A+ G ++ + LL+E+ GL E + FD YL +P E++ +++++QK F Sbjct: 229 DAQAARAGGRVLWNDGLLDEVQGLAEHPVPLLADFDPAYLEVPREVLLTSMESHQKSFGI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V N+ D + G RV+ ARL+DA FW+ D Sbjct: 289 EGPDGKLMPHFLTVLNLSPEDM-EVVKHGWERVLRARLDDARFFWRAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSR----IRVLGKKIAQLIDADV 408 L + D + +LD V+F +G+ G++ R R L ++ A + AD+ Sbjct: 336 --------LRENFDLWLEKLD--HVIFIGALGSMGDKTRRLEALCRWLAERCAPRLGADL 385 Query: 409 A-LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 RA LSKADL T +V EF LQG +G YAV + E + DA++E P GP Sbjct: 386 TAEAARAGRLSKADLVTGLVGEFDTLQGIMGGIYAVQKGEAQAVADALKEQYLPAGPDSP 445 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + + +S+ADK DTL+ + +N P+G+ DP LRR LGIIRI+L+ +D+ + + Sbjct: 446 LPQSPVGALLSMADKADTLVGCFGLNMIPTGAADPNGLRRCALGIIRILLDFGLDLDVRE 505 Query: 528 FIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 L+ FF RL+ Y R L++A L + Sbjct: 506 LFAKARELYGTRQWKLPPDEALDKLMEFFAARLRNYFLSRGQDTLLVDAALNAGAAQVPD 565 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + KR+ I+ + + L EK L Sbjct: 566 SGARLAALAAFSREPGYAEAVQTFKRVANIVRKQAAAET-LPEYWDAALLREAPEKDLAE 624 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + + L + ++ FFD V+V +D +R NRL++LQ + Sbjct: 625 TLETLLPRLDAFRASGDHDAALATLREVRPAVDAFFDGVMVMCEDAALRRNRLAMLQALG 684 Query: 690 NIILIVINVQKI 701 + + + + Sbjct: 685 SRFARLADFAAL 696 >gi|261393260|emb|CAX50886.1| glycyl-tRNA synthetase beta chain (glycine--tRNA ligase beta chain; GlyRS) [Neisseria meningitidis 8013] Length = 687 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 211/710 (29%), Positives = 350/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI R A + + Sbjct: 184 GNKTLGHRFLSNGEITIENADSYAAQMREQGKVVAPFAERKAAIQTALERQARRLNAAVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + E++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGEVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|148980110|ref|ZP_01815890.1| glycyl-tRNA synthetase subunit beta [Vibrionales bacterium SWAT-3] gi|145961411|gb|EDK26717.1| glycyl-tRNA synthetase subunit beta [Vibrionales bacterium SWAT-3] Length = 688 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 201/703 (28%), Positives = 331/703 (47%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGANLAHEGVKWYAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEGQEDKVVEKRGPAVSVAFDADGNATKAAQGWARGNGITVEQADRLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ A+ Sbjct: 119 QEVKGQATSEIVVDLAAKALGNLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGAD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + G GHRF + S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASGRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + +AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AEKAGAAVGGITELEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKE-PRHVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ LD +F ++GT ++ RI L IA+ IDADV Sbjct: 338 ----------KRPLIDRLPELDQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V++ADKLDT++ + I + GS DP+ALRRA+LG++RII+EN ++ L+ I Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQATKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIAK 504 Query: 532 Q---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++I F R + + D D+I+A+L +K Sbjct: 505 AKELLGDKLTNDNVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLANRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ +I L +AEK L ++ Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAENVAVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L ++ EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLAALREPVDAFFDNVMVMADDEALKK 664 >gi|323466386|gb|ADX70073.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus helveticus H10] Length = 687 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 205/733 (27%), Positives = 345/733 (47%), Gaps = 79/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EEIPA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEIPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T I + KG Y V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGMTTDD---IYFEELKGTEYAYV 117 Query: 113 -LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++K + D+L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 118 HVQKEGKKASDILLGM-SDIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSD-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + +I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 170 ---VIPVKILDITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 226 MNELVKKNHWQIKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFE 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L N FI V N D I+ GN +V+ ARL+DA F+ D+ Sbjct: 286 VYDENGKLINHFIAVRNG-NKDYLDNIISGNEKVLVARLDDAQFFYDEDR---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 PL + RL +V FH KIG+ E++ R+R++G + + D Sbjct: 335 ----------KYPLSHFVDRLK--NVSFHDKIGSMAEKMQRVRMIGDYLVKRWDLPENVV 382 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P + Sbjct: 383 TDFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT+I F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSVADKIDTIITFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 -------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 +Q + F DR+K YL ++DL++A+L + Sbjct: 503 LPEIINMLGGVTPAKLPKGDSEQEIADFIRDRVKQYLQKNKFKYDLVDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL + + +++ + +E LYA Sbjct: 563 ILAAANVLQLHHDDEEFKPVVESLTRINNILKKAKFNGK---VDVDESLFVDNSETELYA 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +Q + + + + I+ +F+ ++ D V++NRL+ L + Sbjct: 620 -------GVQNLQNIESLADLYQGFVHLQPVIDQYFEANMIMDKDENVKNNRLAQLYAVS 672 Query: 690 NIILIVINVQKIV 702 + + ++ K+V Sbjct: 673 ELADRLGDLSKLV 685 >gi|253997240|ref|YP_003049304.1| glycyl-tRNA synthetase subunit beta [Methylotenera mobilis JLW8] gi|253983919|gb|ACT48777.1| glycyl-tRNA synthetase, beta subunit [Methylotenera mobilis JLW8] Length = 703 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 354/733 (48%), Gaps = 64/733 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYL 56 M + L+E++ EE+P + K + S L LK +G+ N + + TP RL ++ Sbjct: 1 MSQQNLLVELFVEELPPKALKKLGDAFSSTLFETLKLQGLSADNSVVTSFATPRRLAAHI 60 Query: 57 KGLSPHSPEKIE-ERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDV 108 ++ + +K ++L P G A+ L GL + Q+ K K + Sbjct: 61 TAIAAQAKDKQISQKLMPVSVGLDANGNATPALIKRLNGMGLDESAVSQLTKQMDGKNEA 120 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 + + +++D L+ + AIQK+P PK M + S+ +++RP ++ + + Sbjct: 121 LFLEVTQKGAVLKDGLQKAIEEAIQKLPIPKVMTYQLADG-WSSVNFVRPAHGLIALHGS 179 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRN 226 + I+ + GN T GHRF A + +++ D Y LE V+ RR Sbjct: 180 D-----IVATSALGLSAGNQTQGHRFEAKSATVVIKNADSYAEQLETEGAVIASFAERRA 234 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 I+ A+ GL+ ++D LL+E+ LVE V +G F+ ++L +P+E + LT+K N Sbjct: 235 EIVRQLTAAAAKEGLKPIDDDALLDEVTALVERPNVVLGQFEAEFLEVPQECLILTMKAN 294 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F L N F++VSNI +D +A++ GN RVV RL DA F+ +D+ Sbjct: 295 QKYFPLLDSNNKLTNKFLIVSNICPAD-PSAVIGGNERVVRPRLADAKFFFDQDR----- 348 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 K L+ R + L+ VV+H K+G+QG+R R+ + I + + Sbjct: 349 ---------------KKTLESRTSSLE--KVVYHNKLGSQGQRSQRVVAIANAIGKQLGG 391 Query: 407 DVALVDRAIVL--SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 A+ SK DL T++V EFPELQG +G+ YA + + AIE+H KPR Sbjct: 392 AELAAKAALAAQLSKTDLITDMVGEFPELQGIMGRYYAQHEGLDNDVAFAIEDHYKPRFA 451 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 +++P N++ ITV+LADKL+TL+ ++I EKP+G KDP+ALRR LGIIR+++E+K+ + Sbjct: 452 GDDLPRNQVGITVALADKLETLVGLFSIGEKPTGDKDPFALRRQALGIIRMLIESKLPLA 511 Query: 525 LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 Q I D Q + F DRL + L + ++A+L + L Sbjct: 512 FEQLIHDVLAAFEHDAANTAATVQAIKEFCFDRLSVNLRENGATAQEVDAVLSLDPALLS 571 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + F A+ + KR+ IL K EI +++ L AE L Sbjct: 572 EVPQRLAAVRTFAELAEAPALAAANKRVSNILK---KVEDEIQAQVNVSLLQEAAEVALN 628 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + ++ Y L ++ P++ FFD V+VN +D ++ NRL LL + Sbjct: 629 NALIAVKPEADKQFENGDYTSSLKALAALKAPVDDFFDNVMVNAEDAALKANRLGLLATL 688 Query: 689 KNIILIVINVQKI 701 + V ++ K+ Sbjct: 689 HQTMNRVADLSKL 701 >gi|299067915|emb|CBJ39129.1| glycine tRNA synthetase, beta subunit [Ralstonia solanacearum CMR15] Length = 697 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 209/718 (29%), Positives = 353/718 (49%), Gaps = 66/718 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G+ +P++ E+ Sbjct: 14 PPKALARLGEAFAQSLFDGLSAQGLLEEGAQVEGFATPRRLAASITGVRRTAPDRELREK 73 Query: 71 LGP------RVGAG----KKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRL 119 + P G K + +S G+ TI+ +++ P K + + Sbjct: 74 VLPVNIAFDAEGKPAAPLTKKLAALAKSIGVDTIAPESLERAPDGKAESLFHRYTARGAV 133 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L+ + I +P PK M + + + ++RP ++ +L +++I Sbjct: 134 LADGLQAALSQTIAGLPIPKVMIYQRPNG--DSVQFVRPAHRLIALL-----DDEVIPAG 186 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASA 238 + + GN+T GHRF + I + Y L+ V+ R+ AI + + A A Sbjct: 187 VLGLQSGNVTLGHRFLSAGEIVIPHATAYASTLKSQGKVIAGYAERKEAIRAELLKAAGA 246 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +V + LL+E+ LVEW V+ F++++L +P+E + LT++TNQK F +G Sbjct: 247 D--TVVMPEALLDEVNALVEWPVVYPCHFEEQFLAVPQECLILTMQTNQKYFALTDAQGH 304 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSN+ A++ AI++GN RVV RL DA F++ D+ Sbjct: 305 LRNRFLIVSNL-ATETPRAIIEGNERVVRPRLADARFFFEHDK----------------- 346 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 KPL R+ +L VV+H KIGTQ ERVSR++ + ++A+ + ADVA RA +L+ Sbjct: 347 ---KKPLADRVPQLSR--VVYHNKIGTQLERVSRLQAIAGQLAEKLGADVAHASRAALLA 401 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P V+ Sbjct: 402 KADLLTDMVGEFPELQGTMGTYYARHDGEAEDVALACSEHYQPRFAGDALPGTTTGTVVA 461 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 LADKL+TL+ W I P+G KDP+ALRR LGI+R+++E + + +++ +E Sbjct: 462 LADKLETLVGIWGIGLAPTGEKDPFALRRHALGILRMLIEKPLALGIAEVLEAAATSFEG 521 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + F +DRL+ YL D+ + +EA++ L IV ++ + F + Sbjct: 522 IAAVKPDLAAITDFLYDRLRGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAAL 581 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KRI IL KK + PQ L +AE+ L+ ++ H+ ++ Sbjct: 582 PQAEALAAANKRITNIL----KKTDIAIGSVQPQLLKEDAERALHQAVATSEPHVHDAFA 637 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L + E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 638 RGDFTTALKTLAGLREAVDSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKL 695 >gi|261378163|ref|ZP_05982736.1| glycyl-tRNA synthetase, beta subunit [Neisseria cinerea ATCC 14685] gi|269145627|gb|EEZ72045.1| glycyl-tRNA synthetase, beta subunit [Neisseria cinerea ATCC 14685] Length = 687 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 217/710 (30%), Positives = 350/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKVQLIAGVAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ S++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHSLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V R+ AI + A + + Sbjct: 184 GNKTLGHRFLSNGEIAIENADSYAAQMREQGKVEALFAERKAAIQTALNEQAGRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A DRA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAADRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAKAIEQHYQPRFAGDNLPDGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTSFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|329572238|gb|EGG53898.1| glycine--tRNA ligase, beta subunit [Enterococcus faecalis TX1467] Length = 694 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 349/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTCPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|325207412|gb|ADZ02864.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis NZ-05/33] Length = 687 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 210/710 (29%), Positives = 348/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLIAGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + +L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|16331421|ref|NP_442149.1| glycyl-tRNA synthetase subunit beta [Synechocystis sp. PCC 6803] gi|2500995|sp|Q55690|SYGB_SYNY3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|1001591|dbj|BAA10219.1| glycyl-tRNA synthetase beta chain [Synechocystis sp. PCC 6803] Length = 722 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 198/750 (26%), Positives = 340/750 (45%), Gaps = 79/750 (10%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 MP FL EI +EE+PA A ++ L E + +++ Y TP RL + +KG Sbjct: 1 MPLQTFLFEIGTEELPADFVRSAITQWQGLIPPGLAAEFLQPESVEIYGTPRRLAVLIKG 60 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 L P+++EE GP G A GF + G+ + KGD Sbjct: 61 LPECQPDRLEEIKGPPASAAFKDGQPTPAALGFAKKQGVNPEDFEI--RSTPKGDFIFVN 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + D+L + ++ + + MRW + + RP++ ++C+L + Sbjct: 119 KQLQGQASRDLLPKLALSWLKALDGRRFMRWGDGD-----WRFPRPIRWLVCLLDDQVLP 173 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + ID + ++ GHR P + ++ +Y+ L+ A V++DP+ RR I Sbjct: 174 LQ-IDNGSTTLVGDRLSRGHRILHPADVSLEHGQNYLAQLKTAGVVVDPQERRAMIEQQI 232 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A+ + E + +DLL+E+ LVE+ +G FD+++L LP E+ + T+Q+ F Sbjct: 233 TTQAATLEGEAIIYEDLLDEVEQLVEYPTAVLGKFDQEFLSLPREVTTTVMVTHQRYFPV 292 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L FI ++N S G I GN RV+ ARL DA F++ D ++ Sbjct: 293 VDKDGRLLPHFITIANGDPS-KGDIIAAGNGRVIRARLADAKFFYQADCDD--------- 342 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-- 410 LD + +L+ V F ++GT ++V RI + IA + Sbjct: 343 -----------SLDSYLPQLET--VTFQEELGTMRDKVDRIMEMAAAIADQLGVTEQQRG 389 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +D +L KADL T++V EFPELQG +G++YA++ E+ + I EH PR +++P Sbjct: 390 EIDSTAMLCKADLVTQMVYEFPELQGIMGEKYALVSGESAAVAQGIVEHYLPRHQDDDLP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 V +AD+LDTL++ + + P+GS DP+ALRRA +I + ++I L + + Sbjct: 450 QGLPGQVVGMADRLDTLVSIFGLGLLPTGSSDPFALRRAANAVINVAWAASLEINLLELL 509 Query: 530 ED----------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPEND------- 565 Q L FF RL+ L D + I +DL+ A+L Sbjct: 510 TQGCRDFVTSHPDKTSPLQALKTFFLQRLQTLLQDEQGIDYDLVNAVLGNGETNCDEAQS 569 Query: 566 --------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--IS 615 +L + + ++L E + + + R ++ + ++ I Sbjct: 570 RLHDRLLADLQDVKERAQYLQELRDNGHLDAIYPTVNRSAKLASKGTLPTDQLDPRPVIQ 629 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNV 672 L+ ++EK +Y + E + + Y + + LH + + FF D VLV Sbjct: 630 APQLVQDSEKAVYQALLAIYPKAVEVQESRDYETLVNALHELAPTVAEFFDGPDSVLVMA 689 Query: 673 DDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ E+R NRL+LL I+N LI+ + IV Sbjct: 690 ENDELRQNRLNLLGLIRNYALILGDFGAIV 719 >gi|317153438|ref|YP_004121486.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio aespoeensis Aspo-2] gi|316943689|gb|ADU62740.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio aespoeensis Aspo-2] Length = 703 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 205/736 (27%), Positives = 349/736 (47%), Gaps = 70/736 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F+LEI +EE+PAR + A +L + LL E + ++ +R Y TP R+ ++ G++ Sbjct: 1 MAEFILEIGTEEMPARFVPRLAAELEQTVARLLGEAMIEHEGVRTYATPRRITAHVAGMA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 ++ E GP G KA GF ++ G++ + + KG+ Sbjct: 61 DMQRQQEETVTGPPARIAFDGDGNLTKAGQGFAKTQGVE--EGALFRLETDKGEYLAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 D+L I +++ + +PK MRW F++ RP++ +L +L E Sbjct: 119 TVGGGRSLDILPAICVRSVESLSFPKKMRWGGYD-----FAFGRPIRWLLALL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDA 232 +++ ++ + G T GHR P P V S D Y +E+ V++DPE R+ AI++ Sbjct: 169 AVVEFSVENLTAGRTTRGHRVLGPGPFAVASADRYFSVVEKECRVVIDPETRKQAIVDGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +RLA+A+G E+V + LL+E+ LVE+ + +G D +YL LP E++ +++++QK F Sbjct: 229 NRLAAALGGEIVWHEGLLDEVANLVEYPRPLIGDIDPRYLELPREVLLTSMQSHQKSFGV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + +G L F+ NI+ D A + +G RV+ ARLEDA FW+ D Sbjct: 289 QGPDGRLLPHFLTTLNIEPVD-IALVKKGWERVLKARLEDARFFWEAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---- 408 + +L+ +VVF +G+ G++ RI L +A+ + Sbjct: 336 --------CKVDFQTWLGKLE--NVVFLGPLGSVGDKSRRIGTLCAALAETLAGSKGILP 385 Query: 409 ---ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +A LSKADL +++V EF LQGK+G YA + I E P GP Sbjct: 386 GEFEAYAQAGRLSKADLVSDMVIEFDTLQGKMGGIYAERAGKGDIVSRGIYEQYLPAGPD 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 VP++ VS+ADK DTL + + + P+G+ DPYALRR LGIIRII+E+ +D+ L Sbjct: 446 SPVPSSLSGAFVSMADKADTLAGCFGLGKAPTGANDPYALRRCALGIIRIIMEHDLDMDL 505 Query: 526 SQFIEDQN-------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 F+ L+ FF RL+ + I +++A L + Sbjct: 506 ETFLTTAQEAYAKDIPWKVAREESLAKLLDFFGQRLRALFTGQGIETRVVDAALGAGFSD 565 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI-EEKKNREISLEISPQYLLLEAEK 625 + T+ + L+ F E+ +L+ KR I+ ++ +E++ P E E Sbjct: 566 IRTLKARLDALDAFSREPDFEQAVLTFKRAANIIRKQGDEAGQELTGGYDPDLFEGEHET 625 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + + ++ + + LL + ++ FFD V+V DD VR NRL+LL Sbjct: 626 AFGTRLEENAPRFDALWENGDFAGLLGLLRELRPSVDGFFDNVMVMCDDAAVRLNRLNLL 685 Query: 686 QYIKNIILIVINVQKI 701 + + + + + + + Sbjct: 686 KALVDRLGRLADFNAL 701 >gi|323481396|gb|ADX80835.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis 62] Length = 694 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 349/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADIEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEVKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTSLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGLKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLKEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|257090597|ref|ZP_05584958.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis CH188] gi|256999409|gb|EEU85929.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis CH188] gi|315579043|gb|EFU91234.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0630] Length = 694 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 349/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVECPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|222109760|ref|YP_002552024.1| glycyl-tRNA synthetase subunit beta [Acidovorax ebreus TPSY] gi|254781847|sp|B9MCM4|SYGB_DIAST RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|221729204|gb|ACM32024.1| glycyl-tRNA synthetase, beta subunit [Acidovorax ebreus TPSY] Length = 720 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 215/746 (28%), Positives = 350/746 (46%), Gaps = 79/746 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L+ L+ +G+ + + + +P RL ++ + Sbjct: 5 NLLVELFVEELPPKALQKLGDAFAGVLLEQLQAQGLTSAHSQLTAFASPRRLAAHITEVL 64 Query: 61 PHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAV 112 P + +K + ++L P G A+ L + G S Q+K+ K +V Sbjct: 65 PAAADKAVSQKLMPVAVGLDASGQPTPALLKKLAALGADAASVPQLKRVHDGKAEVLFFE 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 L+ D L+ + AI K+P PK MR+ ++ ++RP ++ + +E Sbjct: 125 SMAKGALLADGLQKALDEAIAKLPIPKVMRYQLQDG-WTSVHFVRPAHGLVALHGSEVL- 182 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 + + + GN T+GHRF A P+ +QS D Y L V+ RR I Sbjct: 183 ---VGVQALGLTAGNTTHGHRFEASVDPVVIQSADSYAEQLRSEGAVIASFAERRAEIAR 239 Query: 231 DAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A VG ++D LL+E+ LVE V + F+K +L +P+E + LT+K NQK Sbjct: 240 QLQAAADRVGGGVRPIDDDALLDEVTALVERPNVLVCEFEKDFLAVPQECLILTMKANQK 299 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F EG L + F++VSNI D +A++QGN RVV RL DA F+ +D+ Sbjct: 300 YFPLLDAEGKLTHQFLVVSNISPQDA-SAVIQGNERVVRPRLADAKFFFDQDR------- 351 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---- 404 K L R+ +L VV+H K+GTQGERV R+R + K IA + Sbjct: 352 -------------KKTLVSRVDQL--AKVVYHNKLGTQGERVERVRHIAKAIATQLFTAL 396 Query: 405 ----------------DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNEN 448 D + VD A +L+K DL T++V EFPELQG +G YAV Sbjct: 397 AQGNAALDSQEGEIAQDYLLTCVDNAALLAKTDLVTDMVGEFPELQGIMGGYYAVSDGLP 456 Query: 449 ISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRA 508 AIE+H KPR + +P + + V+LADKL+TL+ + I P+G +DP+ALRR Sbjct: 457 DEVAHAIEDHYKPRFAGDALPRENVGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRH 516 Query: 509 TLGIIRIILENKIDIPLSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDL 555 LG+IR+++E ++ + L L F +DRL L ++ Sbjct: 517 ALGVIRMLVEKELPLDLDALLASAVPAFGDKIEDTSAQLADFIYDRLAGSLREQGYSAQE 576 Query: 556 IEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS 615 ++A++ L + I+ + F + + + KR+ IL KK E+ ++ Sbjct: 577 VDAVIALRPQRLALVPRQIEAVRAFATLEQAPALAAANKRVTNIL----KKAGEVDPHVN 632 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 + L AEK LYA + F D Y L + P++ FFD V+VN ++ Sbjct: 633 EELLQEPAEKDLYAALQRFVPEANAQFDSGDYTASLQTLAVLRAPVDAFFDDVMVNAEEL 692 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKI 701 +R NR LL+ + + V ++ ++ Sbjct: 693 ALRLNRQGLLKKLHMAMNRVADLSRL 718 >gi|325925467|ref|ZP_08186861.1| glycyl-tRNA synthetase beta chain [Xanthomonas perforans 91-118] gi|325544145|gb|EGD15534.1| glycyl-tRNA synthetase beta chain [Xanthomonas perforans 91-118] Length = 746 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 199/782 (25%), Positives = 335/782 (42%), Gaps = 119/782 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ GV + + TP RL + Sbjct: 1 MSEHLPLLIELGTEELPVKALPGLAQAFFDGVLSGLEKRGVAVTRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P D+L I+ AI +P PK MRW +++ RP++ ++ + + Sbjct: 119 FVHRAVTPGARTADLLSEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGS 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I Sbjct: 174 E-----VIPAELLGVRGDRITRGHRFMHEGAVSLAAPGDYVDALRAAHVLVDPDARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +++ A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VDEVQAAARQAGGSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGTLTEQFIGIANIQSKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L L V + AK+G+ ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLQAMGEGLS--SVTYQAKLGSVADKVARVAALAEAIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 AQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L + Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKKL 505 Query: 529 -------------------------------------------------IEDQNLILFFH 539 +D + F Sbjct: 506 LVEARNQINVQASARQTLKTEAALSKAKDAGAALPKSVEKEAHTALAQSGQDAEIFDFIL 565 Query: 540 DRLKLYLHDRDIRHDLIEAILRPEN--------------------DNLLTIVDLIKHLNE 579 DRL+ Y D+ + A+ + +L I + Sbjct: 566 DRLRGYYADKGVPATHFNAVAALFSVTSEAVPTPTSVGAHPGATHASLYDFDRRIDAIGI 625 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KRI IL E EI +I L AE+ L + Sbjct: 626 FATLPEADALAAANKRIRNILRKAE---GEIPGDIDTSLLREPAEQALAEAVEAAIGDTG 682 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +++ Y + L + ++ FFD V+VN DD ++R NRL+LL+ + + + V ++ Sbjct: 683 DALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLRANRLALLKKLGDRLGSVAAIE 742 Query: 700 KI 701 + Sbjct: 743 HL 744 >gi|1303829|dbj|BAA12485.1| YqfK [Bacillus subtilis] Length = 679 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 198/720 (27%), Positives = 340/720 (47%), Gaps = 61/720 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR +++ L L G LKE+ + + ++ + TP RL +++K Sbjct: 1 MSKQDLLLEIGLEEMPARFLNESMVQLGDKLTGWLKEKNITHGEVKLFNTPRRLAVFVKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G K+ K + Sbjct: 61 VAEKQDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQGANVED--LYIKEVKGIEYVFV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +L + I + +PK+MRW +IRP+K I+ + + Sbjct: 119 QKFQAGQETKSLLPE-LSGLITSLHFPKNMRWGNED-----LRYIRPIKWIVALFGQD-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + G T GHRF + ++S Y L+ V+ DP R+ I + Sbjct: 171 ---VIPFSITNVESGRTTQGHRFLGHE-VSIESPSAYEEQLKGQHVIADPSVRKQMIQSQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 227 LETMAAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + + G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 287 VKDKNGDLLPHFITVRNG-NSHAIENVARGNEKVLRARLSDASFFYKEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 +D + +L+ ++VFH ++G+ ++V R+ + +K+A + AD Sbjct: 338 ------------NIDANVKKLE--NIVFHEELGSLADKVRRVTSIAEKLAVRLQADEDTL 383 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 V RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR Sbjct: 384 KHVKRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGET 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ V++ADKLDT+ +F++I P+GS+DPY L R GI+ I+L+ I + Sbjct: 444 PSTFTGAVVAMADKLDTIASFFSIGVIPTGSQDPYGLPRQASGIVAILLDRNWGISFEEL 503 Query: 529 ------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 ++ L+ FF RLK L+ IRHD+I+A+L + + + L + Sbjct: 504 LTFVQTDKENELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKLG 563 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + ++ + R+ I + +I P E E +L+ ++QE+ Sbjct: 564 APGFKETAEALGRVISISKKG------VRGDIQPDLFENEYEAKLFDAYQTAKENLQENF 617 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ ++ Sbjct: 618 SKKDYEAALASLAALKEPIDAYFDHTMVIADNESLKANRLAQMVSLADEIKSFANMNALI 677 >gi|254804255|ref|YP_003082476.1| glycyl-tRNA synthetase beta chain [Neisseria meningitidis alpha14] gi|254667797|emb|CBA03763.1| glycyl-tRNA synthetase beta chain [Neisseria meningitidis alpha14] Length = 687 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 210/710 (29%), Positives = 347/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGTAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + +L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V R+ AI A + + Sbjct: 184 GNKTLGHRFLSNGEITIENADSYAEQMREQGKVEASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEQTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|58337480|ref|YP_194065.1| glycyl-tRNA synthetase subunit beta [Lactobacillus acidophilus NCFM] gi|227904116|ref|ZP_04021921.1| glycyl-tRNA synthetase beta chain [Lactobacillus acidophilus ATCC 4796] gi|81311456|sp|Q5FJU0|SYGB_LACAC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|58254797|gb|AAV43034.1| glycyl-tRNA synthetase beta chain [Lactobacillus acidophilus NCFM] gi|227868135|gb|EEJ75556.1| glycyl-tRNA synthetase beta chain [Lactobacillus acidophilus ATCC 4796] Length = 687 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 209/733 (28%), Positives = 345/733 (47%), Gaps = 79/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EE+PA + ++ L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEMPAHVVPRSVSQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T I + KG Y V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGMTTDD---IYFEELKGTEYAYV 117 Query: 113 -LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++K + D+L + I+ + +P MRW + F ++RP+ ++ + Sbjct: 118 HVQKEGKKASDILLGM-SEIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++I + + +I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 167 GNEVIPVKILDITAGRKTEGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 226 MDELVKENHWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFE 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 286 VYDENGKLINHFIAVRNG-NKDYLDNVISGNEKVLVARLDDAQFFYDEDR---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 PL + RL DV FH KIG+ E+V R+R++G +A+ + Sbjct: 335 ----------KYPLSHFVDRLK--DVSFHDKIGSMAEKVQRVRMIGDYLAKRWNLPENVV 382 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P + Sbjct: 383 KDFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT+I F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSIADKIDTIITFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 IE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + DQ + F DR+K YL ++D+I+A+L + Sbjct: 503 LPEIISLLNGVTPARLPKSDVDQEIADFIRDRVKQYLQKNKFKYDIIDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL + K ++E+ +EK LY Sbjct: 563 ILAAANVLQLHHDDEEFKPVVESLTRIDNILKKAKFKG---NVEVDESLFEDNSEKELY- 618 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +Q + + + + I+ +FD ++ + +V++NRL+ L + Sbjct: 619 ------VGVQNLQEIESLADLYQGFVQLQPVIDQYFDVNMIMDKNEKVKNNRLAQLYAVS 672 Query: 690 NIILIVINVQKIV 702 + + N+ K+V Sbjct: 673 ELADRLGNLSKLV 685 >gi|304437024|ref|ZP_07396987.1| glycyl-tRNA synthetase beta subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369975|gb|EFM23637.1| glycyl-tRNA synthetase beta subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 682 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 208/729 (28%), Positives = 326/729 (44%), Gaps = 81/729 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA + EDL+ + +LKE + Y+ +R TP R L + GL+ Sbjct: 4 DLLFEIGTEEIPAHVMPHLLEDLAQLAETMLKEHRLSYEKVRTLGTPRRAALIVTGLAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP V G KA GF R G+ + I++D A + + Sbjct: 64 QEDVNTETRGPSVAIAFDADGNPTKAGAGFARGQGVDPSA--LIQRDG----YVYASVHE 117 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L +++P ++ +P P SMRW F +IRP++ + + E I Sbjct: 118 SGAATAELLTSLLPDLVRAIPLPNSMRWGDLD-----FRFIRPIRWFVALYGTE-----I 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L + GN + GHR AP + S Y E+A +++DPE RR I Sbjct: 168 VPFTLAGVTSGNHSRGHRTLAPADFVITSAADYEAACEKAYIIVDPERRRAMICEQITET 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G DLLEE++ LVE+ GSF++KYL LP E + ++ +Q+ F + Sbjct: 228 AKACGGTAEITPDLLEEVLYLVEYPTALSGSFEEKYLALPAEAVITPMRDHQRYFPVKAA 287 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + GN RV+ ARL DA F+ D+ Sbjct: 288 DGSLLPAFITVRNGG-KAHLDVVAHGNERVLRARLADAQFFFDEDRR------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI------DADVA 409 K L + +L VVF +G+ E+ R+ L I + + +A Sbjct: 334 -------KSLAEHREKLKT--VVFQRGLGSMYEKTERLTALTTAIVEEMAAGDADGTALA 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA LSKADL T +V EF ELQG +G+EYA+L E+ + AI+E PR + +P Sbjct: 385 DARRAAELSKADLVTGMVTEFTELQGIMGREYALLDGESPAVACAIDEQYMPRFAGDELP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +S ADK+D ++ ++ P+GS+DP+ALRR LG++ +++E K + LS + Sbjct: 445 QTPLGVALSAADKVDNIVGTFSQGRIPTGSQDPFALRRQALGLVLMLIEQKSTMLLSDLV 504 Query: 530 E----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + F RLK L +R +R+D+ EA+L + D + + Sbjct: 505 DEACDLYDLDVSLCQKMQAYVADFIRLRLKNVLTERGVRYDVQEAVLE-DVDFVADVPVR 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ +S + + S R+ I + P E E L + Sbjct: 564 AAYVERLLASDGADALVQSFVRVGNIAR------GVTGGAVDPALFQAEEEGALLSAYQT 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 E ++ + I FFD V+V D V++NRLSLL+ I + +L Sbjct: 618 AAAARAEG------EDTLPAERALGKAINTFFDAVMVMDKDARVKENRLSLLKMIDDYLL 671 Query: 694 IVINVQKIV 702 + KIV Sbjct: 672 ETADYSKIV 680 >gi|315150154|gb|EFT94170.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0012] Length = 694 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 350/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTLSRIQLEEKVIEFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|315640640|ref|ZP_07895746.1| glycyl-tRNA synthetase beta subunit [Enterococcus italicus DSM 15952] gi|315483668|gb|EFU74158.1| glycyl-tRNA synthetase beta subunit [Enterococcus italicus DSM 15952] Length = 693 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 213/733 (29%), Positives = 355/733 (48%), Gaps = 76/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L+EI EE+PA + + L + +E+ + Y N+R Y TP RL + ++ + Sbjct: 4 MAKDVLIEIGLEEMPAHVVVPSMNQLEAKVATFFEEQHLSYDNIRAYSTPRRLAVLIEAV 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R GL T K+ + A Sbjct: 64 PERQADIEEEIKGPAKKIALDAEGNWSKAAQGFVRGQGLTTDD--ITFKELNGVEYVYAT 121 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + DVL + I + +P +M W+ F +IRP+ ++ + Sbjct: 122 KKTTGKQTIDVLTG-LKEVITSLTFPVTMHWNKYD-----FEYIRPIHWVVALF-----G 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I ++ ++ + GHRF + + Y+ L E V+ D R+ I+N Sbjct: 171 EEVIPFEILDVKTDRHSRGHRFLGHE-VTFKRAHDYVETLAEQSVIADSAERQQLIVNQI 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A ++ D+DLLEE+ LVE+ F+G+F K+YL +PEE++ ++K +Q+ F Sbjct: 230 SAIAEKNKWQVFLDEDLLEEVTNLVEYPTAFVGNFAKQYLEIPEEVLVTSMKEHQRYFDV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 RT +G L FI V N +++GN +V+ ARLEDA F++ DQ Sbjct: 290 RTEDGQLLPHFISVRNG-NDVAIENVIKGNEKVLTARLEDAEFFYQEDQKL--------- 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 + + +L V FH KIG+ E+++R+ V+ + I + + A++ Sbjct: 340 -----------TIAACVEKLK--HVAFHEKIGSIYEKMTRVGVIAQIIGETVGLSSAELT 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E S AI EH P +P Sbjct: 387 DLQRASEIYKFDLVTNMVDEFPELQGIMGEKYALLQGEKASVAAAIREHYLPIASEGELP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD+++ F+A PSGS DPYALRR T GIIRII + P + Sbjct: 447 KSVVGSVLAIADKLDSVLTFFAAGMVPSGSNDPYALRRQTYGIIRIIEAKQWHFPFEKLQ 506 Query: 530 --------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E+ + F RL+ +L RDIRHD+IEA+L E ++ Sbjct: 507 RAIQEKINEDQATYGIMLSDENNLVSDFLKARLRQHLASRDIRHDVIEAVLASEQKDVSR 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + +++ + + + + + R+ + +E KN + I P+ EAEK L+ Sbjct: 567 LFQAAELVSQHLADQEFKPSMEALTRVMNLAKKQETKNSD----IQPELFENEAEKALFE 622 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +++ + + + Y L ++ IE +FDQ +V VDD +R NRL+LL I Sbjct: 623 AVTEVEANFATNTMAENYQ----ALVALHPAIEAYFDQTMVMVDDASIRANRLALLAKIS 678 Query: 690 NIILIVINVQKIV 702 ++L + ++ ++V Sbjct: 679 KMVLAIASLDQLV 691 >gi|229916324|ref|YP_002884970.1| glycyl-tRNA synthetase, subunit beta [Exiguobacterium sp. AT1b] gi|229467753|gb|ACQ69525.1| glycyl-tRNA synthetase, beta subunit [Exiguobacterium sp. AT1b] Length = 684 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 200/715 (27%), Positives = 337/715 (47%), Gaps = 71/715 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ ++ + L+ + LKE V + ++ Y TP RL + ++ ++ + E GP Sbjct: 14 PAQYVLRSEKQLAERVDAFLKEARVDFGSIEVYSTPRRLAVIVRDVAETQQDLTETLRGP 73 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF R GL + K + A + + +L Sbjct: 74 AKKIAQDAEGNWSKAAQGFARGRGLTVED--LYFAEEKGVEYVFAERHEKGKETVSLLNG 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + I+ + +PK+M+W S+ ++RP++ ++ + + IID ++ + Sbjct: 132 -LEDVIRSLTFPKNMKWG-----TSSLRYMRPIRWLIALFGQD-----IIDFTIEGVNTN 180 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 N+T GHRF + + + S Y++ LE A V+ + E R+ I LA+ G + D Sbjct: 181 NVTRGHRFLSKGDVVISSPAEYVQTLESAFVMANYEMRKAEIERQIQELATKQGWTIPLD 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLLEE+ LVEW G FD+ YL LPEE++ T+K +Q+ F +G L N F+ V Sbjct: 241 ADLLEEVTNLVEWPTALFGEFDEAYLDLPEEVLITTMKEHQRYFPVYL-DGTLKNYFVTV 299 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + + +GN +V+ ARL DA+ F++ D+ +D Sbjct: 300 RNGNA-EHLENVARGNEKVIRARLADAVFFYEEDK--------------------KTKID 338 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEI 426 ++ RLD +VFH K+GT G + R+ + K++A L +AD+ V RA + K DL +++ Sbjct: 339 DQLGRLDR--IVFHEKLGTTGAKARRVTKIAKELAALFEADLEKVSRAGAIHKFDLVSQM 396 Query: 427 VREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTL 486 V EF ELQG +G++YA+ Q E+ AI EH PR + P ++LADKLD++ Sbjct: 397 VYEFTELQGIMGEKYALQQGEDKEVAAAIREHYMPRFAGDASPETATGAVLALADKLDSI 456 Query: 487 INFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------------------ 528 F+ I PSGS+DP+ALRR G+++I+ + KID+ + Sbjct: 457 AAFFGIGMIPSGSQDPFALRRQAQGVVQILGDWKIDLSIDTLLSKVVELQLEAGLYEADK 516 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 L FF RLK L ++ +R+D+I+A+L ++ + + EF S+ + Sbjct: 517 EQVKAQLDDFFKLRLKYRLQEQQVRYDVIDAVLTTSLT-VVRLDARADAIQEFVST-DAK 574 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + R+ I E + ++ P + E L+ I ++++ Y Sbjct: 575 ALIEQLSRVVNISKKGE------AGDVDPSLFENDHEIALHDAIEQTAPATADAVEMGDY 628 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + DLL + PI ++F+ +V DD VR NRL + + I V + +V Sbjct: 629 KKALDLLQQLESPIMMYFEHTMVMSDDEAVRQNRLHEMNRLATTIKRVADFNALV 683 >gi|156972784|ref|YP_001443691.1| glycyl-tRNA synthetase subunit beta [Vibrio harveyi ATCC BAA-1116] gi|166227931|sp|A7N1D8|SYGB_VIBHB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|156524378|gb|ABU69464.1| hypothetical protein VIBHAR_00449 [Vibrio harveyi ATCC BAA-1116] Length = 693 Score = 555 bits (1430), Expect = e-155, Method: Composition-based stats. Identities = 198/708 (27%), Positives = 328/708 (46%), Gaps = 68/708 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 ADSQSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQAERMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSQIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 + E L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYSHENGDENKKLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR----- 342 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 +PL R+ L+ +F ++GT ++ RI L IA+ I A Sbjct: 343 ---------------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGA 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 DV RA +L+K DL T +V EF + QG +G YA E A+ E PR + Sbjct: 386 DVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+N +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L Sbjct: 446 ELPSNGVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLV 504 Query: 527 QFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + Q++I F R + + D D+I+A+L Sbjct: 505 DLVAKAKSLFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 QRVKAVSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 EVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 669 >gi|260774987|ref|ZP_05883887.1| glycyl-tRNA synthetase beta chain [Vibrio coralliilyticus ATCC BAA-450] gi|260609077|gb|EEX35236.1| glycyl-tRNA synthetase beta chain [Vibrio coralliilyticus ATCC BAA-450] Length = 688 Score = 555 bits (1430), Expect = e-155, Method: Composition-based stats. Identities = 200/703 (28%), Positives = 330/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGADLAHEGVKWYAAPRRLALKVTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEGQADKVVEKRGPAVSVAFDADGNATKAAQGWARGNGITVEQADRLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQATSEIVVDLAAKALGNLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF ++S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 SQKAAAAVGGVADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDELPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ I Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIAK 504 Query: 532 Q---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDHLTNDNVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLANRPTKPSDFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELAADIDLSLLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y Q L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQQALSKLADLREPVDSFFDNVMVMADDEALKK 664 >gi|261379391|ref|ZP_05983964.1| glycyl-tRNA synthetase, beta subunit [Neisseria subflava NJ9703] gi|284797839|gb|EFC53186.1| glycyl-tRNA synthetase, beta subunit [Neisseria subflava NJ9703] Length = 687 Score = 555 bits (1429), Expect = e-155, Method: Composition-based stats. Identities = 215/710 (30%), Positives = 351/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLIDGAAEYTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I + K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAKIEDLTII--NDGKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + E I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGE-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI + A + + Sbjct: 184 GNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALNEQAGRLKATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERATRLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTTFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 + F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETVDFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|170691404|ref|ZP_02882569.1| glycyl-tRNA synthetase, beta subunit [Burkholderia graminis C4D1M] gi|170143609|gb|EDT11772.1| glycyl-tRNA synthetase, beta subunit [Burkholderia graminis C4D1M] Length = 700 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 204/714 (28%), Positives = 337/714 (47%), Gaps = 60/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + +K + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGIAERLAGRDLIEGQLSFERYATPRRLAVTVKNVRTVAPEKHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P + G + L + G S +++ K + + P + + Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFSISDLERAQDGKAEAFFLRYAAPGATLAEG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP + + ++++ + I Sbjct: 139 LQAALDETLSKLPIPKVMTYQRPDG--SNVQFVRPAHRLTAL-----HGDQVVPVSALGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 + T GHRF + +++Q D Y L V+ + R+ I A G + Sbjct: 192 DADDTTLGHRFLSEGFVQIQHADSYADTLMHKGRVVPNFADRKETIRTHLLAHA--DGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYACRFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ + G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETATPGD-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ +R+ R+ L IA LI ADVAL RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSALQRMERVEALAGAIAALIGADVALAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +P V+LADK Sbjct: 407 ITDMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPGTATGTVVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+TL+ W I +P+G KDP+ALRR LG++RI++E ++ + + Sbjct: 467 LETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLAVDFVELLRTAYAQFAAVPNV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 Q + F DRL+ L +R I+A+L L IV + + EF + + Sbjct: 527 ADSTQAIYDFSMDRLRGLLRERGHAPGEIDAVLALNPTRLDDIVARLDAVREFAALPEAA 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL E N S + P L+ AEK L+A + +Q + + Y Sbjct: 587 SLAAANKRISNILKKSE--NASASGGVQPALLVEAAEKALHAQLEQVAPRVQSQLAARDY 644 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 645 TGALTALAALREPVDTFFNDVMVNAEDPSLRANRLALLGALHQQMNCVADISRL 698 >gi|153835124|ref|ZP_01987791.1| glycyl-tRNA synthetase, beta subunit [Vibrio harveyi HY01] gi|148868396|gb|EDL67510.1| glycyl-tRNA synthetase, beta subunit [Vibrio harveyi HY01] Length = 693 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 199/708 (28%), Positives = 330/708 (46%), Gaps = 68/708 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 ADSQSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQAERMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 + E L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYSHENGDENKKLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR----- 342 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 +PL R+ L+ +F ++GT ++ RI L IA+ I A Sbjct: 343 ---------------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEKIGA 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 DV RA +L+K DL T +V EF + QG +G YA E A+ E PR + Sbjct: 386 DVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+N +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L Sbjct: 446 ELPSNGVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLV 504 Query: 527 QFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + Q++I F R + + D D+I+A+L Sbjct: 505 DLVAKAKSLFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 QRVKAVSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V VDD ++ Sbjct: 622 EVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMVDDEALKK 669 >gi|86157732|ref|YP_464517.1| glycyl-tRNA synthetase subunit beta [Anaeromyxobacter dehalogenans 2CP-C] gi|123736895|sp|Q2IQJ5|SYGB_ANADE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|85774243|gb|ABC81080.1| glycyl-tRNA synthetase beta chain [Anaeromyxobacter dehalogenans 2CP-C] Length = 701 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 199/729 (27%), Positives = 339/729 (46%), Gaps = 67/729 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A L L L + + + +R TP RL ++ + ++ Sbjct: 1 MADLLFEIGAEEIPAGFVPGALRQLEDDLAKALADARLAHGEVRAVGTPRRLAVWARDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E GP V G A GF RS G++ + ++ KG+ Sbjct: 61 PKQTDARTEAFGPPVAQAYDAEGKPTPAATGFARSQGVEVSA--LVRAQTPKGERVAVTK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R E VL ++ + + + K+MR ++ RP++ ++ +L Sbjct: 119 VEKGRKAEQVLPALLERLVAGLRFRKAMRS-----RFDEVTFARPVRWMVALLGG----- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQ-SLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + + + E+ G +TYGHRF AP I ++ + D Y+ L A VL DPE RR A+L + Sbjct: 169 RPLKVRHGEVASGKVTYGHRFLAPKAIALKGTPDDYLAKLRRAHVLADPEERRAALLAEL 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R G ++ +D L+E+++ LVE +G F++ L LP E++ ++ +Q+ F Sbjct: 229 ARAGKEAGGKVRDDPALVEQVLYLVEEPSAVVGEFERSNLELPPEVVISEMRNHQRYFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L N F+ VS + D A G RV+ ARL DA F++ D+ Sbjct: 289 VDGKGRLKNRFVAVSATRVKD-PAVARHGYERVLRARLADARFFFEEDR----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 + L +R+ L F AK+G++ +R RI + +A+ + D + D Sbjct: 337 ---------KRKLHERIEDLGRR--TFQAKLGSELDRAQRIGAVASGLARALGKDALVAD 385 Query: 413 R--AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 A L+K DL T +V EFPELQG +G YA L+ DAIE+H KP G E +P Sbjct: 386 LLEASRLAKVDLNTGMVGEFPELQGTMGAHYARLEGLKPEIADAIEDHYKPIGAAEEMPR 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + V++AD+L +L+ + EK +G+ DP+ LRRA +GI+RI++ + L+ +E Sbjct: 446 SDLGALVAVADRLHSLVGIIGVGEKATGAADPFGLRRAAIGILRIVIARGYHLSLATAVE 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ F R++ +R DL+EA+L +D+++ Sbjct: 506 QTLDALAGVKLAAGRALVAEQVLDFLRGRVRAAWTER-FDADLVEAVLAAGSDDVVDARR 564 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ L E + ++ KR+ I +EK + + P L AE+ L A + Sbjct: 565 RLEALAEAKARPDFGSLAVAFKRVANI---QEKAGGPGAAAVDPALLRDPAEQDLLAALE 621 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + Y + + ++ + FFD VLV +D +R NRL L++ + + Sbjct: 622 KVEQEVGARRAARDYPAVLRTVATLEPAVARFFDDVLVMAEDPALRANRLGLMRRVGALF 681 Query: 693 LIVINVQKI 701 + + +KI Sbjct: 682 SDLADFRKI 690 >gi|256847129|ref|ZP_05552575.1| glycyl-tRNA synthetase beta subunit [Lactobacillus coleohominis 101-4-CHN] gi|256715793|gb|EEU30768.1| glycyl-tRNA synthetase beta subunit [Lactobacillus coleohominis 101-4-CHN] Length = 690 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 197/733 (26%), Positives = 343/733 (46%), Gaps = 76/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + +LLE+ EE+PA + + L + LK++ + + +++Y TP RL L + GL Sbjct: 1 MANSYLLEVGVEEMPAHVVTPSIHQLHERVAKYLKDQRIDFTEIQEYATPRRLALLIHGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S P+ E GP G KA GF R G K+ K + Sbjct: 61 SDQQPDIDESVKGPAKKIAQDQDGNWTKAAIGFTRGQGATVDEIEF--KEVKGTEYVFVE 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +VLK +P I + +P M+W +IRP++ ++ +L Sbjct: 119 KHIAGKPVAEVLKG-LPDVITSMNFPTLMKWGYHD-----LQFIRPIRWLVSLL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ + ++ G T GHRF P+ + + D Y + L + V+ D R++ I Sbjct: 168 DEVVPFSILDVTAGRQTQGHRFLGH-PVDIATADDYEQTLHDDFVIADQGKRKDLIKKQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + ++ D DLLEE+ LVEW F GSFD+KYL LPE ++ ++K NQ+ F Sbjct: 227 TEIIDQHQWQIDWDADLLEEVNNLVEWPTAFAGSFDEKYLALPEPVLITSMKDNQRFFCL 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R ++G L FI V N + +++GN RV+ RLEDA F+ DQ Sbjct: 287 RDQDGKLLPHFISVRNG-NREHLENVIKGNERVLVPRLEDAQFFYDEDQKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 +DQ + RL V FH +I + ++++R ++ K + + ++ + A Sbjct: 337 -----------TIDQYVERLK--KVSFHDQISSMADKMARTAIIAKLLGEKLNLTDQEQA 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T++V EF ELQG +G+ YA L E A+ EH P +P Sbjct: 384 DLQRAAQIYKFDLTTQMVGEFAELQGIMGEIYAKLFGEKADVAAAVREHYMPISAEGALP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ-- 527 KI +++ADKLD++ +F+ PSGS DPYALRR GI+RI+ + + +PL Sbjct: 444 QTKIGAILAIADKLDSIFSFFGAGMIPSGSNDPYALRRQAYGIVRIVADRQWHLPLLAMQ 503 Query: 528 ------------------FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + FF DRLK + ++RHD+++A+ + +L+ Sbjct: 504 KEIAEQIQQSDMQLKFDYLKNADQVNNFFMDRLKQFFAGENLRHDIVDAVTKTNQADLVN 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I++ +N+ S + + + + R+ ++ +K + S E++P +E +L+ Sbjct: 564 IIEAAAAINDQKSDDEFKDDIEALTRVIRLA----QKGQPTSSEVNPGLFQNPSEAKLHE 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + E + L S+ I +FD+ ++ D +V++NRL+ LQ I Sbjct: 620 ATKQLQSKFAELPLAE----ALHQLRSLAPIITEYFDENMIMDKDPQVQNNRLAQLQQIA 675 Query: 690 NIILIVINVQKIV 702 + + ++ +++ Sbjct: 676 RMTQVFGDLNQLI 688 >gi|311069126|ref|YP_003974049.1| glycyl-tRNA synthetase subunit beta [Bacillus atrophaeus 1942] gi|310869643|gb|ADP33118.1| glycyl-tRNA synthetase subunit beta [Bacillus atrophaeus 1942] Length = 679 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 199/720 (27%), Positives = 341/720 (47%), Gaps = 61/720 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR H++ L L L E + + ++ + TP RL + +K Sbjct: 1 MSKQDLLLEIGLEEMPARFMHESMVQLGEKLGNWLTERNIAHGEVKLFNTPRRLAVLVKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G KD K + Sbjct: 61 VAEKQADIKEEAKGPAKKIALDSDGNWTKAAIGFSKGQGAGVED--LYIKDVKGTEYVFV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +L + I + +PK+MRW +IRP+K I+ + + Sbjct: 119 QKFQAGQDTKTLLPE-IEGLITSLHFPKNMRWGNED-----LRYIRPIKWIVALFGQD-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + G++T GHRF + +++ Y L+E V+ DP+ R++ I + Sbjct: 171 ---VIPFSITNVQSGHMTKGHRFLGHE-VSIEAPSAYEEKLKEQHVIADPDIRKSMIQHQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A+ + D+DLL E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 227 LESIAAEKNWNIPVDEDLLNEVNHLVEYPTALYGSFEPEFLSIPEEVLVTTMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + + G L F+ V N S + +GN +V+ ARL DA F+K DQ Sbjct: 287 VKDQNGDLLPYFVTVRNG-NSHAIENVARGNEKVLRARLSDASFFYKEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---V 408 +++ + +L+ ++VFH ++G+ ++V R+ + +K+A + AD Sbjct: 338 ------------NINENVKKLE--NIVFHEELGSLADKVRRVTTIAEKLADQLKADEETK 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L+ RA +SK DL T ++ EFPELQG +G++YA + E + A+ EH PR Sbjct: 384 KLITRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEEEAVAIAVNEHYMPRAAGGET 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ V+LADKLDT+ +F++I P+GS+DPY LRR GI+ I+L+ I Q Sbjct: 444 PSTFTGAVVALADKLDTITSFFSIGVIPTGSQDPYGLRRQASGIVSILLDQNWGISFEQL 503 Query: 529 ------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 ++ L+ FF RLK ++ IRHD+I+A+L + + L + Sbjct: 504 LTFVKTDKNSELLDFFTQRLKYVMNAEQIRHDVIDAVLDSSELEPYSALHKAHVLEKKLG 563 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + ++ + R+ I E I P E E +LY + + +S Sbjct: 564 APGFKETAEALGRVISISKKGE------HGNIQPGLFENEQEAKLYDAYKEAKRDLHDSF 617 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + K Y L ++ EPIE +F+ +V+ D+ ++ NRL+ + + + I N+ ++ Sbjct: 618 NKKDYEAALTALAALKEPIEEYFNHTMVHADNETLKANRLAQMINLADEIKSFANMNALI 677 >gi|294085843|ref|YP_003552603.1| glycyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665418|gb|ADE40519.1| Glycyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 703 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 234/730 (32%), Positives = 371/730 (50%), Gaps = 58/730 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMR----QYWTPHRLFLYL 56 M D +E+ SE+IPARMQ KA DL ++ L + G+ Y + L LY+ Sbjct: 1 MADLFIELVSEDIPARMQVKACADLQRLVYAGLDDLGLGYTKADDTDACLVSSRHLALYV 60 Query: 57 KGLSPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 G+ ++I E+ GPRV A ++AI+GFL STGL D +++D KG A Sbjct: 61 VGVDDRQADRIVEKRGPRVDAPEQAINGFLASTGLT--RDQLVEEDTPKGRFLFARSESK 118 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 D+L +++ + PWPKS RW S F W+RPL I + + + Sbjct: 119 GAQTADLLASMIAGILNSFPWPKSQRWG-----TSRFRWVRPLHRINVLFGGKRLDGALA 173 Query: 177 --DLDLKEIPCGNITYGHRFHAPHPIKVQ---SLDHYIRDLEEAMVLLDPECRRNAILND 231 D I G+ + GH F +P + + + Y+ L++A VL++ R +++ Sbjct: 174 LGGDDDAAIAFGDKSCGHFFESPGDVDLDGLKNAQDYLGRLKKAHVLVNHNERIQTVMDQ 233 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A +LA+ +G + + E LVEW + +G + +++ LP E+++ +I+T+QK Sbjct: 234 ARKLAADMGCSVKSGDAQIAETANLVEWPNLLVGKIEDRFMQLPAEVLQSSIQTHQKYIT 293 Query: 292 TRT-REGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSS 349 +G ++ FI+V+N A +++ GN RV+ ARL DA FW +D+ Sbjct: 294 LEHISDGSMSPHFIIVANRIADHVRDDVIKAGNQRVLRARLADAEFFWTQDK-------- 345 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADV 408 ++ L+ + +L D+ F+ +G+ ++ RI L IA I D+ Sbjct: 346 ------------ARTLEDYLPQL--TDITFYDGLGSVHDKARRIEKLAGDIAPFIDGCDL 391 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A RA +L+KADL T +V EFPELQG +G YA+ E+ A+ H +P+GP + V Sbjct: 392 AKAQRAGLLAKADLVTGMVGEFPELQGIMGGYYAIAAGEDDDIAAAVASHYRPQGPQDAV 451 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P ++TVSLADK+DTL+ F+ KP+GSKDPYALRRA LG+I IILE+ IPL++ Sbjct: 452 PALPEAMTVSLADKIDTLVGFFGAGAKPTGSKDPYALRRAALGVIAIILESHTRIPLAKI 511 Query: 529 IE-----------DQNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTIVDLIKH 576 D L+ F +RL++ L D+++ HD+ ++L D++L + D Sbjct: 512 FAKAAAYHGFDHVDDALLPFLRERLRVSLLDQNVAHDVAASVLQTATTDDVLLLADTAHA 571 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRLYAVISDF- 634 L F ++ G L +R ILA EE K++R + I P + +AE+ L + I Sbjct: 572 LAIFLATEDGVGLLAGWRRAASILAAEESKEDRVFAPTIDPNLFVHDAERGLMSAIDILG 631 Query: 635 ---GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 E D + Q L + PI+ FF +V+VN DD +R+NRL LL I++ Sbjct: 632 SHDADEQTEIPDKAQLLQQMQALGQLRTPIDHFFTEVVVNDDDPAIRENRLGLLALIRSH 691 Query: 692 ILIVINVQKI 701 + + + KI Sbjct: 692 MQNIADFSKI 701 >gi|259503185|ref|ZP_05746087.1| glycyl-tRNA synthetase [Lactobacillus antri DSM 16041] gi|259168842|gb|EEW53337.1| glycyl-tRNA synthetase [Lactobacillus antri DSM 16041] Length = 691 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 208/733 (28%), Positives = 356/733 (48%), Gaps = 75/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + +LLE+ EE+PA + + + L + LKE + + ++++Y TP RL L + GL Sbjct: 1 MANSYLLEVGVEEMPAHVVTPSIKQLHQRVADYLKEARISFSDIQEYATPRRLALLIHGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ E GP G KA GF R G K+ K + Sbjct: 61 ADKQPDVDETVKGPAKKIAQDSDGNWTKAAIGFTRGQGATVDDIEF--KEVKGEEYVFVE 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +VL +P I + +P M+W + +IRP++ ++ +L Sbjct: 119 KHIAGKPVAEVLAG-LPEVITALNFPTLMKWG-----YNNLQFIRPIRWLVSLL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ + ++ G T GHRF +++ + D Y+ DLE+ V++DP+ R+ I + Sbjct: 168 DQVVPFSILDVEAGRTTRGHRFLGHD-VELANADDYVTDLEKEFVIVDPQRRKKVISDQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + + +D DLLEE+ LVEW F GSFD KYL LP+E++ ++K NQ+ F Sbjct: 227 DAIVEEHDWVIDKDPDLLEEVNNLVEWPTAFAGSFDPKYLVLPDEVLITSMKDNQRFFYL 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G L FI V N + +++GN RV+ RLEDA F++ DQ Sbjct: 287 RDHDGNLLPNFIAVRNG-NKEYLENVIKGNERVLVPRLEDAKFFYEEDQKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + RL V FH KI + +++ R+ V+ + I Q ++ A++A Sbjct: 337 -----------TIDQYVERLK--KVSFHDKISSMYDKMQRVAVIARLIGQRLNLSAAELA 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA + K DL T++V EF ELQG +G+ YA L E AI EH P +P Sbjct: 384 DLDRAAHIYKFDLTTQMVGEFAELQGVMGEIYAKLFGEKDDVAAAIREHYMPISAEGALP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 K+ +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + + L Sbjct: 444 VTKLGAILAIADKLDSILSFFAVDMIPSGSNDPYALRRQAFGIVRIINDRGWHLSLLGIQ 503 Query: 530 --------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + FF DRLK + R +RHD+I+A+ +ND++ T Sbjct: 504 PVLIKALADADVAIDFDLSKNASAVRNFFLDRLKQFFSGRRLRHDIIDAVTDTDNDDIET 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + ++E A + + + R+ +I +K ++E++ ++ PQ +E +LYA Sbjct: 564 VFEAATAIDEHKDDADFKDAVEALTRVLRI---SKKGHQELAAQVDPQLFENPSEAKLYA 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + + + L + I +FD+ ++ + VR+NRL+ L I Sbjct: 621 AVDKVAAGAVDRTVAENF----TALRQLAPVITEYFDENMIMDKNEAVRNNRLAQLAIIA 676 Query: 690 NIILIVINVQKIV 702 + ++ N+ ++ Sbjct: 677 RLARVMGNLNDLI 689 >gi|78049866|ref|YP_366041.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038296|emb|CAJ26041.1| glycyl-tRNA synthetase beta chain [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 746 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 197/782 (25%), Positives = 331/782 (42%), Gaps = 119/782 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + + ++ L++ GV + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLEQAFFDGVLSGLEKRGVAVTRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P D+L I+ AI +P PK MRW +++ RP++ ++ + + Sbjct: 119 FVHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGS 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I Sbjct: 174 E-----VIPAELLGVRGDRITRGHRFMHGGAVSLAAPGDYVDALRAAHVLVDPDARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +++ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VDEVQAAVRQAGGSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI + D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGTLTEQFIGIANIHSKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L L V + AK+GT ++V+R+ L + IA I AD Sbjct: 340 ------------LKQGLQAMGEGLS--SVTYQAKLGTVADKVARVAALAEAIAPQIGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAEAAGEPSEISLAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L + Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKKL 505 Query: 529 -------------------------------------------------IEDQNLILFFH 539 +D + F Sbjct: 506 LVEARNQINVQASARQTLKTEAALSKAKDAGAALPKSVEKEAHTALAQSGQDAEIFDFIL 565 Query: 540 DRLKLYLHDRDIRHDLIEAILRPEN--------------------DNLLTIVDLIKHLNE 579 DRL+ Y D+ + A+ + +L I + Sbjct: 566 DRLRGYYADKGVPATHFNAVAALFSVTSEAVPTPTNVGAHPGATHASLYDFDRRIDAIGI 625 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KRI IL K EI +I L AE+ L + Sbjct: 626 FATLPEADALAAANKRIRNILR---KVEGEIPGDIDTSLLREPAEQALAEAVEAAIGDTG 682 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +++ Y + L + ++ FFD V+VN DD ++R NRL+LL+ + + + V ++ Sbjct: 683 DALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLRANRLALLKKLGDRLGSVAAIE 742 Query: 700 KI 701 + Sbjct: 743 HL 744 >gi|295424884|ref|ZP_06817599.1| glycyl-tRNA synthetase beta subunit [Lactobacillus amylolyticus DSM 11664] gi|295065450|gb|EFG56343.1| glycyl-tRNA synthetase beta subunit [Lactobacillus amylolyticus DSM 11664] Length = 689 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 213/734 (29%), Positives = 359/734 (48%), Gaps = 79/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EE+PA + ++ + L+ LKE G+ +++++ Y TP RL + ++ L Sbjct: 1 MAKDYLFEIDTEEMPAHVVSRSVKQLADRTKKFLKENGLKFKDIKTYSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T I + KG Y V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGITTDD---IYFEELKGTEYAYV 117 Query: 113 -LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++K + D+L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 118 HVQKEGKKASDILLGM-SDIIKDMTFPTKMRWDSND-----FEFVRPIHWLVSLYDSD-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + +I G T GHRF + + + D Y+ L++ V++D + R++ I+N Sbjct: 170 ---VIPVKILDITAGRKTEGHRFLG-DSVVLANADDYVEALKDQFVIVDAKERKDMIVNQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + L ++ EDK+LLEE+ LVE+ VF+GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 226 MNDLVKKNNWKVKEDKNLLEEVTNLVEYPTVFVGSFDEKYLNIPDEVLITSMKDNQRYFE 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 286 VYDQNGKLINHFIAVRNG-NKDYLDNVISGNEKVLVARLDDAQFFYDEDR---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 PL + ++ +V FH KIG+ E++ R+R++G +A+ + D Sbjct: 335 ----------KYPLSHFVDKMK--NVSFHDKIGSMAEKMKRVRLIGDYLAKRWNLDENVV 382 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P + Sbjct: 383 KDFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGENEEVAVAIKEHYMPTTAEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT++ F+ PS S DPYALRR GI+RI+L K +P +Q Sbjct: 443 PETTVGSLLSVADKIDTILTFFGAGMIPSSSNDPYALRRNAYGIVRILLNQKWSLPFNQV 502 Query: 529 --------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 ED+ + LF DR+K YL + ++D+I+A+L + Sbjct: 503 LPEIVELVDGKTPAKLPKTNEEDEQIALFIRDRIKQYLQKNNFKYDVIDAVLASSQQDPS 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ K L A+ + + S RI IL + N++ E+ +E L+ Sbjct: 563 EILSAAKVLGLHHDDAEFKPVVESLTRIDNILKKAKFNNKQA--EVDENLFEDASENELF 620 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A I + + + + + I+ +FD ++ D++VR+NRL+ L + Sbjct: 621 AGIQNLQ-------EIQNLADLYQGFVQLQPVIDRYFDTNMIMAKDKKVRNNRLAQLSQV 673 Query: 689 KNIILIVINVQKIV 702 + + ++ K+V Sbjct: 674 SVLADRLGDLSKLV 687 >gi|315144753|gb|EFT88769.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2141] Length = 694 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 351/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTLSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVISFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|218767499|ref|YP_002342011.1| glycyl-tRNA synthetase subunit beta [Neisseria meningitidis Z2491] gi|25009340|sp|Q9JW67|SYGB_NEIMA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|121051507|emb|CAM07800.1| putative glycyl-tRNA synthetase beta subunit [Neisseria meningitidis Z2491] Length = 687 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 211/710 (29%), Positives = 349/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEYTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + +L+ ++L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKLLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 GNKTLGHRFLSDGEITIENADSYAEQMREQGKVVASFAERKAAIQTALEGQARRLNAAVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--GVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+ KDPYALRR+ LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTSDKDPYALRRSALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDVVAKLQAVASFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGVVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|312898538|ref|ZP_07757928.1| glycyl-tRNA synthetase, beta subunit [Megasphaera micronuciformis F0359] gi|310620457|gb|EFQ04027.1| glycyl-tRNA synthetase, beta subunit [Megasphaera micronuciformis F0359] Length = 682 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 195/729 (26%), Positives = 326/729 (44%), Gaps = 76/729 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI +EEIPA A + L + + + Y+++R TP RL L + GL Sbjct: 1 MSKDLLLEIGTEEIPAHYMPSALKQLHEGAADIFAKNHLDYKDIRTVGTPRRLALLVTGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + + GP V G +A GF R + + G VY A Sbjct: 61 AEKQADVSSKNKGPSVKIAFDADGNPTQAAMGFARGQHIDVSELV-----TEDGYVY-AD 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +L I+ + + +PKSM W ++RPL+ + + E Sbjct: 115 VTVAGSETKALLPEIMKRLVSSLAFPKSMTWGNED-----MRFVRPLRWFVALFGTE--- 166 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ ++ + G T GHRF +Q+ Y+ L E +++DPE RR+ I+N Sbjct: 167 --VVPFEMAHVVSGRTTRGHRFLGTGDFDIQAPGEYVDLLREHYIIVDPEERRDMIVNGL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H +A G +V D++LLEE++ LVE+ G FD YL LPE + +K +Q+ F Sbjct: 225 HAVAKKQGGHVVMDEELLEEVVYLVEYPTPLYGCFDTDYLELPEAAVITPMKDHQRYFPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R E L N F+ V N + GN RV+ ARL+DA F+ D+ Sbjct: 285 RDSEDRLMNMFLTVRNGD-DYHLDTVRHGNERVLRARLDDAKFFFAEDR----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVAL 410 K L R L +VF +GT ++ R+ + + +D + Sbjct: 333 ---------KKSLADRTEDLKR--IVFQDGLGTLFDKSQRLAAIMTFLTAKLDLPVEEGE 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + L+K DL T++V+EF ELQG +G+EYA+L E +A+ E PR + +P Sbjct: 382 IKHLADLAKTDLLTQMVQEFTELQGVMGREYALLDGEEPETAEAVFEQYLPRFAGDELPH 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + +SLADK DT+ +++ P+GS+DP+ALRR T+G++ I+++ +I + Sbjct: 442 TTLGLLLSLADKFDTITGSFSLGLIPTGSQDPFALRRQTIGVLNILIDAGWNINCDEVFA 501 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +L +F RLK L D + +I+ +L+ ++ N IV Sbjct: 502 YILEVLGTDRNKREDVIASLHDYFALRLKNILQDAGFDYHIIDCVLQGDSMNAAEIVKRA 561 Query: 575 KHL--NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 L +EF + + L + R+ ++ + + ++ E EK LYA Sbjct: 562 TALRDSEFSTQEE---LLQAYTRVANMVKDAQ------NTDVDDTLFETEEEKALYAACL 612 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + ++ Y ++L I F D VLV + V++NR++LL +I Sbjct: 613 AVEAELPQAYAVYDYRCAVEILGRAVSAINNFLDNVLVMHEKEAVKNNRMNLLTRTLGLI 672 Query: 693 LIVINVQKI 701 V +++K+ Sbjct: 673 SPVGDIKKL 681 >gi|303245471|ref|ZP_07331755.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio fructosovorans JJ] gi|302493320|gb|EFL53182.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio fructosovorans JJ] Length = 697 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 193/730 (26%), Positives = 321/730 (43%), Gaps = 64/730 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FL EI EE+PAR E+ + L + + + + TP RL + + L+ Sbjct: 1 MPHFLFEIGFEEMPARFLAGLTEEARALFSEELAQVKLGSDAVAAFATPRRLVVSIPELA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 SP + E GP G A GF + G + +KG Sbjct: 61 EASPREEEVVTGPPERVGFDASGNPTPAASGFAKGQGKDVAD--VFVMETEKGRYLALRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++L I ++K+ +PK MRW + F++ RP+ L +L + Sbjct: 119 TVGGETAMNLLPGICQDVVKKLSFPKRMRWGSRE-----FAFGRPVHWFLALL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDA 232 ++ L +I G T GHR P P + + Y + + V+LD R + + A Sbjct: 169 AVVPFRLDDIASGRETRGHRIMGPGPFSIATAKDYFAVIRDQGKVILDAREREGMVRSQA 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +LA+ G V + LL E+ GL E V +G FD K+L +P E++ +++++QK F Sbjct: 229 EKLAAEAGGTAVINPTLLMEVTGLTEHPVVVLGRFDPKFLDVPREVLITSMESHQKSFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + +G L F+ + +D + +G RV+ ARLEDA FW+ D Sbjct: 289 QDGKGGLLPVFLTTLGLMPAD-LELVRRGWQRVLTARLEDARFFWEAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-- 410 L ++ +L+ VVF A +G+ ++ R+ L +A+L + Sbjct: 336 --------LGTDIETWQKKLE--SVVFLAGLGSMRDKARRLERLCGVVAELSGKPEIMLE 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +A LSK DL + +V EF ELQG +G Y + ++ + A+ E P GP VP Sbjct: 386 ASQAGGLSKVDLVSTMVGEFAELQGIMGGIYVRRKGQSETVSRAVGEQYLPAGPDSPVPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +S+ADK DTL + + P+G+ DPYALRRA LGI RI++E+ + L + ++ Sbjct: 446 TLAGAILSVADKADTLAGCFGNDMAPTGAADPYALRRAALGICRIVIEHGLRFDLMELLQ 505 Query: 531 DQ------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 L+ FF RL+ Y R ++EA + ++ + + Sbjct: 506 AAIDGYGDLKFKVDRTHLLAKLLDFFGQRLRAYFTGRGFDTLVVEAAVGASFTDIAALAE 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRLYAVI 631 + L F ++ + +L+ KR I+ + +S I P+ L +AEK L A Sbjct: 566 RVAALAAFAATPDFGQAVLTFKRAANIIRKQGVGAGVPLSGAIKPELLEEQAEKDLAAAC 625 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 Y + D+L+ + ++ FFD V+V D +VR NRL+LL+ + + Sbjct: 626 EAVFPRYDALFHAGDYAAVLDVLYELRPTVDAFFDNVMVMCDAMDVRLNRLNLLKALVDR 685 Query: 692 ILIVINVQKI 701 + V + + Sbjct: 686 LGRVADFAAL 695 >gi|294669014|ref|ZP_06734100.1| glycyl-tRNA synthetase, beta subunit [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309006|gb|EFE50249.1| glycyl-tRNA synthetase, beta subunit [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 687 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 214/710 (30%), Positives = 351/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P ++ + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKVLNNLGNHFAASVAEGLEKAQLIDGEAEYTAYASPRRLAVQIKNVKAIQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI + A + + Sbjct: 184 GNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALNEQAGRLKATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTTFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLLNRLAKQMNAVADIALL 685 >gi|323496933|ref|ZP_08101961.1| glycyl-tRNA synthetase subunit beta [Vibrio sinaloensis DSM 21326] gi|323318007|gb|EGA70990.1| glycyl-tRNA synthetase subunit beta [Vibrio sinaloensis DSM 21326] Length = 688 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 201/703 (28%), Positives = 328/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGASLAHEGVKWYAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ RS G+ ++ D KG+ L Sbjct: 61 AEGQEDKVVEKRGPAVSVAFDADGNATKAAQGWARSNGITVEQADRLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ A+ Sbjct: 119 QEVKGQATSEIVVDLAAKALGNLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGAD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 SQKAAAAVGGVADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV Sbjct: 338 ----------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDELPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN + L+ I Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYSLDLTDLIAK 504 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++I F R + D D+I+A+L +K Sbjct: 505 AQSLFGDKLTNANVANDVIDFMLGRFNAWYKDEGYSVDIIQAVLANRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|15677760|ref|NP_274924.1| glycyl-tRNA synthetase subunit beta [Neisseria meningitidis MC58] gi|25009341|sp|Q9JXQ5|SYGB_NEIMB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|7227187|gb|AAF42259.1| glycyl-tRNA synthetase, beta chain [Neisseria meningitidis MC58] gi|316985552|gb|EFV64499.1| glycyl-tRNA synthetase beta subunit [Neisseria meningitidis H44/76] Length = 687 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 212/710 (29%), Positives = 347/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + +L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQIGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLVVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + Sbjct: 184 GNKTLGHRFLSDGEITIENADSYAAQMREQGKVVASFAERKAAIQTVLEGQARRLNATAA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--TNVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEITEAVEQHYQPRFAGDNLPEGKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFNSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|325139583|gb|EGC62123.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis CU385] gi|325200981|gb|ADY96436.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis H44/76] Length = 686 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 212/710 (29%), Positives = 347/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 15 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + +L+ Sbjct: 75 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQIGKPLGGLLE 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 133 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLVVLHGGD-----IVNVSVLGLQS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + Sbjct: 183 GNKTLGHRFLSDGEITIENADSYAAQMREQGKVVASFAERKAAIQTVLEGQARRLNATAA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 243 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 303 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 342 LESRLPKL--TNVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P KI+ V+LADKL+ Sbjct: 400 EMVGEFPELQGTMGKYYARLDGETEEITEAVEQHYQPRFAGDNLPEGKIAAAVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 460 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFNSFPQGLLNEKTP 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 520 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 579 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 635 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 684 >gi|126657519|ref|ZP_01728675.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. CCY0110] gi|126621223|gb|EAZ91936.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. CCY0110] Length = 711 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 197/738 (26%), Positives = 333/738 (45%), Gaps = 70/738 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ +EE+PA +A I+ L+E + + Y TP RL + + L Sbjct: 3 FLLEVGTEELPADFIDEAIAQWKQIIPNSLEENFLTPDKVAVYGTPRRLAVLISELPEQQ 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP G KA +GF R ++ + KGD + Sbjct: 63 KDRDEVIKGPPAKAAFKDGKPTKAAEGFARKQEVEIKDLDI--RPTDKGDFIFIEKKIKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R +++L+ ++P I + + MRW + RP++ ++ + + +II+ Sbjct: 121 RQTKEILQALIPNWIDSLEGRRFMRWGNGE-----LRFSRPIRWLVALCDKQVLPIEIIN 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 D I ++ GHR P + + Y+ L A V +DP+ R+ I D +A Sbjct: 176 GD-STITSDRLSRGHRILHPDTVSIAQASDYVETLRSAYVEVDPKQRQEIIEKDIETIAK 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + DLL E+I L+E+ G FD ++L LP E+I + +Q+ F + E Sbjct: 235 ELKGKADLPDDLLTEVINLIEYPTAIAGKFDPEFLNLPTEVITTVMVKHQRYFAVKKTEN 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI ++N + I QGN RV+ ARL DA F+ D + Sbjct: 295 ELLPNFITIANGDP-NKKDIIAQGNERVIRARLADAQFFYTADCDE-------------- 339 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVDRA 414 PLD + L+ +V F ++GT ++V RI + ++IA+ ++ D ++ Sbjct: 340 ------PLDSYLPELE--NVTFQKELGTMRDKVDRIMDMAQQIAKQLEIDEKEQEEIEST 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L KADL T++V EFPELQG +G++YA++ E+ I +H PRG + +P Sbjct: 392 ALLCKADLVTQMVYEFPELQGVMGQKYALVSGESEQVAQGIFDHYLPRGANDIMPKTLTG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V +AD+LDTLI+ + + P+GS DP+ALRRA II + E K+ I LSQ Sbjct: 452 QVVGIADRLDTLISIFGLGMIPTGSGDPFALRRAANAIISVTWEAKLPINLSQLLIQGCE 511 Query: 529 ----------IEDQNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLLT 569 + L F R++ L D +I +DL+ A+L + NLL Sbjct: 512 AFMADHADKDSPLEALQTFLIQRIQTLLQDELNIDYDLVNAVLGEADAEYTDRALQNLLD 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRL 627 + D + L E ++ +K + R ++ A + E+ + + +E+ Sbjct: 572 VKDRAEFLQEIRNNEILDKIYETVNRSTRLAAKGDLNYTELDPSEVVQTELFEKSSEQEF 631 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREVRDNRLSL 684 Y + + ++ + Y + + L I + FFD VLV ++ +VR NRL+L Sbjct: 632 YNGLMALLSKTTQAQSQRNYQLLIEGLLDIVPKVSEFFDGENSVLVMDENPQVRQNRLNL 691 Query: 685 LQYIKNIILIVINVQKIV 702 L ++N ++ + IV Sbjct: 692 LGVLRNHGRVLADFGAIV 709 >gi|116626245|ref|YP_828401.1| glycine--tRNA ligase [Candidatus Solibacter usitatus Ellin6076] gi|116229407|gb|ABJ88116.1| Glycine--tRNA ligase [Candidatus Solibacter usitatus Ellin6076] Length = 646 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 219/703 (31%), Positives = 333/703 (47%), Gaps = 68/703 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 LLEI +EEIP M A E+L + L + ++++R TP RL L ++G+ Sbjct: 5 LLLEIGTEEIPDWMITTALENLRMSFEKL----EITHESVRLDATPRRLVLRVEGVPAKQ 60 Query: 64 PEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 + E LGP A KA++GF R G+ + KG+ Y+ + P R I+D+ Sbjct: 61 QDSEERILGPAKSAPPKAVEGFARKQGIAPED--LTVESTGKGEYYVYQKKVPGRFIKDI 118 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L +P I + +PK+M W + +IRP++ I+ +L E+II +L + Sbjct: 119 LAEALPGIILGLYFPKTMYW----TGKGGPRFIRPIRWIVALL-----GEEIIPFELAGV 169 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 G +T GHR I + + D Y + L + V+L + RRN I + + Sbjct: 170 RSGALTSGHRRLGAREIAITTSD-YEQRLRDHGVILSAQERRNQIRAGI------ADVRI 222 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCF 303 D LLE ++ L E+ + GSFD ++L LPEE++ ++ +QK F G LA F Sbjct: 223 KSDDALLETLVYLTEFPRPIRGSFDPQFLELPEEVLITVMRHHQKYFSVEDASGKLAPEF 282 Query: 304 ILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSK 363 + V NI + D + +GN RV+ AR DA FW DQ K Sbjct: 283 VAVMNIDS-DPEGFVRRGNERVLRARFNDARFFWDADQ--------------------KK 321 Query: 364 PLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLC 423 PL R + D+ +V F AK+G+ + R+ L + + D RA L K DL Sbjct: 322 PLAAR--KQDLANVTFQAKLGSYLVKTERMMALAAE----LGGDAN-AVRAAELCKCDLT 374 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 TE+V+EF ELQG +G YA +Q E + AI +H KP + +P N ++ VSLADKL Sbjct: 375 TELVKEFTELQGVVGGLYARVQGEPEAVWQAIYDHYKPESMEDALPRNATALIVSLADKL 434 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-LILFFHDRL 542 DTL + + P+GSKDP+ALRRA G++RI++E K+ +PL I L FF +R+ Sbjct: 435 DTLRGCFGVGMVPTGSKDPFALRRAAQGVVRILVEGKLPLPLLDLIGRDEALRAFFEERV 494 Query: 543 KLYLHD-RDIRHDLIEAILRP--ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 + Y D R +D + A + NL+ + ++ + +S E S KRI I Sbjct: 495 RYYFKDIRGFAYDEVNACMAASVGWSNLVDLESRLERVRALRASPDFEPLAASFKRIRNI 554 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 L + I L E+ LY ES+ + + Sbjct: 555 LEQAKFSGG---GAIDEALLEDGPERELYTEFRGIQAQPIESV-----------ISRLRP 600 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +++FFD+VLVN D VR NRL+LL + + + +IV Sbjct: 601 RVDLFFDKVLVNAPDPVVRQNRLTLLSTLLAEFSTMADFSEIV 643 >gi|229552310|ref|ZP_04441035.1| glycine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|258539719|ref|YP_003174218.1| glycyl-tRNA synthetase subunit beta [Lactobacillus rhamnosus Lc 705] gi|229314292|gb|EEN80265.1| glycine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|257151395|emb|CAR90367.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus rhamnosus Lc 705] Length = 689 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 199/731 (27%), Positives = 343/731 (46%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L+EI E++PA + + + LK + + + +Y TP RL L + L+ Sbjct: 3 HDYLIEIGLEDMPAHVVTPSINQFHDKTVAFLKANHLEHGQIDRYATPRRLALLVHDLAA 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + GP G KA GF RS G+ + K K D Sbjct: 63 KQADVETDVKGPAKKIAQDADGNWTKAAIGFSRSQGMTPDD--IVFKTIKGVDYVYLHKA 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++L ++ I+ + +P M+W F +IRP+ ++ +L + Sbjct: 121 IKGKEAAEILPGML-DVIKGLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDT 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G +T GHRF P+ + + D Y+ L++ V+++P R+ I + Sbjct: 170 VVPMKLLDVEAGRVTQGHRFLG-KPVTLPNADAYVAALKDQFVIVEPAARKQLIREQIEQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ ++ D DLLEE+ LVEW F G+FD KYL +PE ++ ++K NQ+ F R Sbjct: 229 IATDHQWQIELDSDLLEEVNNLVEWPTAFAGTFDPKYLAIPEAVLITSMKDNQRYFYARD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G + N FI V N D ++ GN +V+ ARLEDA F+ DQ Sbjct: 289 QAGKMVNAFIGVRNG-NHDHLNNVIAGNEKVLTARLEDAAFFYAEDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + + + + RL V FH KI + ++++R +V+ +A + A + Sbjct: 335 -------KRSIAEDVERLK--AVSFHDKISSMYDKMARTKVIAALLADQFGLTADEKADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 386 DRAASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPIAADGALPQS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++ADKLD+L++F+A++ PSGS DPYALRR GI+R+I E+ L+ Sbjct: 446 LVGTVLAIADKLDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAEHDWPFALASLQPT 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q L F DR K L + IRHD+++A+ + ++ I+ Sbjct: 506 IAKALAEADQTNGLDFAAHQQELNDFMIDRAKQLLQGQKIRHDIVDAVTVRSDADIAGIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D K L + + + + + + R+ +I + ++ + P E +L+ + Sbjct: 566 DAAKLLTQHAADSDFKPVMGALGRVLRI-----TGKQTVTTAVDPTKFENPTEGQLHDAV 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y L ++ +PI+ +FD +V DD+ VR+NRL+ LQ + + Sbjct: 621 TTTAKTFAAEPTEADYQ----ALKALAKPIDAYFDATMVMADDKAVRENRLATLQQLAQL 676 Query: 692 ILIVINVQKIV 702 I +V +++ Sbjct: 677 IRQFGDVSQVI 687 >gi|163802139|ref|ZP_02196034.1| glycyl-tRNA synthetase subunit beta [Vibrio sp. AND4] gi|159173944|gb|EDP58754.1| glycyl-tRNA synthetase subunit beta [Vibrio sp. AND4] Length = 698 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 200/713 (28%), Positives = 326/713 (45%), Gaps = 73/713 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +KI E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 ADSQSDKIVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQADRMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGKPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASARTIRGHRFMGEQEFTIDSAEQYPTLLEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F+++YL +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEYLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 + E L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYSHENGDKNRKLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR----- 342 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 +PL R+ L+ +F ++GT ++ RI L IA+ I A Sbjct: 343 ---------------KRPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGA 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 DV RA +L+K DL T +V EF + QG +G YA E A+ E PR + Sbjct: 386 DVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+N +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E + L Sbjct: 446 KLPSNGVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYHLDLV 504 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 + Q +I F R + + D D+I+A+L Sbjct: 505 DLVAKAKSLFAQEDGTSRLTNDNVEQEVIEFMLGRFRAWYQDEGFSIDIIQAVLARRPTK 564 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 +K ++ F E + KR+ ILA K + E++ +I L AEK Sbjct: 565 PADFDQRVKAVSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQENAEKA 621 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 L + ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 LAESVEVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 674 >gi|83746124|ref|ZP_00943179.1| Glycyl-tRNA synthetase beta chain [Ralstonia solanacearum UW551] gi|207742376|ref|YP_002258768.1| glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum IPO1609] gi|83727307|gb|EAP74430.1| Glycyl-tRNA synthetase beta chain [Ralstonia solanacearum UW551] gi|206593766|emb|CAQ60693.1| glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum IPO1609] Length = 697 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 208/718 (28%), Positives = 349/718 (48%), Gaps = 66/718 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G+ +P++ E+ Sbjct: 14 PPKALARLGEAFAQSLFDGLSAQGLLEEGAQVEGFATPRRLAAAIAGVRRAAPDRELREK 73 Query: 71 LGP------RVGAGK----KAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRL 119 + P G K + +S G+++I+ +++ P K + L Sbjct: 74 VLPVNIAFDAEGKPAAPLVKKLAALAKSVGVESIAPETLERAPDGKAESLFYRYTARGAL 133 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L+ + I +P PK M + + ++RP ++ +L +++I Sbjct: 134 LADGLQAALTQTIAGLPIPKVMTYQRPSG--DSVQFVRPAHRLIALL-----DDEVIPAR 186 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASA 238 + + GN+T GHRF + I + Y L+ V+ R+ AI + A A Sbjct: 187 VLGLQSGNVTLGHRFLSAGEIVIPHATAYAGTLKSQGKVIAGYAERKEAIRAELLTAAGA 246 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +V + LL+E+ LVEW ++ F++++L +P+E + LT++TNQK F +G Sbjct: 247 D--TVVMPEALLDEVNALVEWPVIYPCHFEEQFLEVPQECLILTMQTNQKYFALTDAQGH 304 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSN+ A+D AI++GN RVV RL DA F++ D+ Sbjct: 305 LRNRFLIVSNL-ATDTPQAIIEGNERVVRPRLADARFFFEHDK----------------- 346 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 KPL R+ L VV+H KIGTQ ERVSR++ + ++A + ADVA RA +L+ Sbjct: 347 ---KKPLADRVPLLSR--VVYHNKIGTQLERVSRLQAIAGQLADKLGADVAHASRAALLA 401 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P V+ Sbjct: 402 KADLLTDMVGEFPELQGTMGTYYARHDGEAADVALACSEHYQPRFAGDALPGTATGTVVA 461 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF---------- 528 LADKL+TL+ W I P+G KDP+ALRR LGI+R+++E + + +++ Sbjct: 462 LADKLETLVGIWGIGLAPTGEKDPFALRRHALGILRMLIEKPLALGIAEVLEVAAASFEG 521 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + + F +DRL+ YL D+ + +EA++ L IV ++ + F + Sbjct: 522 IAAVKPDPAAITDFLYDRLRSYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAAL 581 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KRI IL KK + PQ L +AE+ L+ ++ H+ ++ Sbjct: 582 PQAEALAAANKRITNIL----KKTDIAIGSVQPQLLKEDAERALHQAVATSEPHVHDAFA 637 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L + E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 638 RGDFTTALKTLAGLREAVDSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKL 695 >gi|240013283|ref|ZP_04720196.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae DGI18] gi|240120355|ref|ZP_04733317.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID24-1] Length = 687 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 206/710 (29%), Positives = 343/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I + DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAKIEDLTIIH--DGRQDVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + + +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADIALL 685 >gi|254932643|ref|ZP_05266002.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes HPB2262] gi|293584202|gb|EFF96234.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes HPB2262] gi|332311899|gb|EGJ24994.1| Glycyl-tRNA synthetase beta subunit [Listeria monocytogenes str. Scott A] Length = 688 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 196/731 (26%), Positives = 338/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + ++ K + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVAPED--LTFREIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + + +P SM W + +IRP+K ++ + Sbjct: 119 KEVIGEKTTALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF + Y L E V+++ R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLG-KTATINQPSDYPNALLEQFVVVNASERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEGELLPHFVTVRNG-NHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P ++P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + + Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIAPTGSADPFGLRRSAFGAVRIIQANGWDIPMLEVV 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + Sbjct: 504 SRIVDMERAEGATELPSSDVIKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGNPNMIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LN+ + + + R+ I E +E+ P E E+ L+ Sbjct: 564 IDRAQILNKHADAEWFRPTIEALTRVVNISKKYEDG-----VEVDPSLFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDFAGLKIVDR----LKAFADLRTTIDAYFDNTLVMTDNDELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|297717826|gb|ADI50056.1| glycyl-tRNA synthetase beta chain [Candidatus Odyssella thessalonicensis L13] Length = 674 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 238/723 (32%), Positives = 363/723 (50%), Gaps = 73/723 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL EI SEEIPARMQ KAAED L+E G+ ++ + Y TP RL + GL Sbjct: 1 MSQEFLFEILSEEIPARMQVKAAEDFKAAFETGLREAGLSFEAVTTYITPRRLVATISGL 60 Query: 60 SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 + + EER GPR+ A + A+ GFL+S+G Q K + A L + Sbjct: 61 ASATQATTEERRGPRLEAPEAALQGFLKSSGQTKEQLIQ------KDGYWYANLITEAKP 114 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 +L I I+ WPKSMRW + +W+RP++ IL +L + ++ + + Sbjct: 115 TSCILPDICRQIIRSFSWPKSMRW-----HGAPHTWVRPVRGILAVLAGKPLIFEVPEFN 169 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 L N T GHRF A +V Y +LE+ V+L E R+ ILN L Sbjct: 170 L---VSSNKTKGHRFLASGEFEVTCFSDYQHNLEKNFVILSHEQRQKLILNKLIELGQQQ 226 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G L D+ LLEE+ GL E+ Q +G + +L LP++++ +++ +QK F G + Sbjct: 227 GYSLEHDEKLLEEVAGLSEYPQPLVGKIEGSFLRLPKKVLSTSMRVHQKYFTFTDSLGNI 286 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F LV+N ASD G +++G RV+ ARL DA F+ +D Sbjct: 287 APIFGLVANTVASDNGTTMLRGYERVLRARLSDASFFYDQD------------------- 327 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L PL + +LD ++FH K+G+ G+RV R+ L A RA L K Sbjct: 328 -LKTPLQAYLPQLD--SIIFHTKLGSLGQRVQRLMNLVSSTA---------AKRAAELCK 375 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T +V EFPELQG +G YA Q E +AI +H +P GP + P N ++ ++L Sbjct: 376 CDLVTSMVGEFPELQGYMGGVYAQAQQETAEIAEAITQHYQPVGPQDASPHNPAAMELAL 435 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID----------------- 522 A+KLDTL+ F+AI E P+GSKDPYALRRA LGIIRI+ +N + Sbjct: 436 AEKLDTLVGFFAIGELPTGSKDPYALRRAALGIIRIVRDNNLQDWRLLDKITQALSAYQA 495 Query: 523 --IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAIL--RPENDNLLTIVDLIKHLN 578 + +++ ++ F +RL L +R D + A+L DN+ IV+ IK LN Sbjct: 496 QGLQINERFSAPAVLDFIMERLGHSLKAEGLRPDTLAAVLQSANRGDNICGIVERIKALN 555 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 E+ +S G + +R + IL +L++ PQ EK L+ + + Sbjct: 556 EYLTSEAGYALRAAFRRAYGILPK-----DHEALKVQPQLFTEHEEKALFEELETVNSRC 610 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q +++ Y ++ +L + +PI+ FF + +N ++ +R+NRL+LLQ + + I+ + Sbjct: 611 QSLLENHDYTRLMMILAHLRDPIDAFF-NLKINDENDMIRNNRLALLQLMIHQTAIIADF 669 Query: 699 QKI 701 K+ Sbjct: 670 SKL 672 >gi|46907686|ref|YP_014075.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes serotype 4b str. F2365] gi|47093465|ref|ZP_00231228.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 4b H7858] gi|226224059|ref|YP_002758166.1| glycyl-tRNA synthetase beta chain [Listeria monocytogenes Clip81459] gi|254824483|ref|ZP_05229484.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL J1-194] gi|255521273|ref|ZP_05388510.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL J1-175] gi|300765601|ref|ZP_07075580.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes FSL N1-017] gi|67461979|sp|Q71ZL2|SYGB_LISMF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|259511927|sp|C1KVA5|SYGB_LISMC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|46880955|gb|AAT04252.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes serotype 4b str. F2365] gi|47018141|gb|EAL08911.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 4b H7858] gi|225876521|emb|CAS05230.1| Putative glycyl-tRNA synthetase beta chain [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293593721|gb|EFG01482.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL J1-194] gi|300513702|gb|EFK40770.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes FSL N1-017] gi|328465501|gb|EGF36730.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes 1816] Length = 688 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 196/731 (26%), Positives = 339/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + ++ K + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVAPED--LTFREIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + + +P SM W + +IRP+K ++ + Sbjct: 119 KEVIGEKTTALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF + Y L E V+++ R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLG-KTATINQPSDYPNALLEQFVVVNASERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEGELLPHFVTVRNG-NHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P ++P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + + Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIAPTGSADPFGLRRSAFGAVRIIQANGWDIPMLEVV 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGATELPSSDVIKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNMIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LN+ + + + R+ I E +E+ P E E+ L+ Sbjct: 564 IDRAQILNKHADAEWFRPTIEALTRVVNISKKYEDG-----VEVDPSLFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDFAGLKIVDR----LKAFADLRTTIDAYFDNTLVMTDNDELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|258508508|ref|YP_003171259.1| glycyl-tRNA synthetase subunit beta [Lactobacillus rhamnosus GG] gi|257148435|emb|CAR87408.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus rhamnosus GG] gi|259649818|dbj|BAI41980.1| glycyl-tRNA synthetase beta subunit [Lactobacillus rhamnosus GG] Length = 689 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 197/731 (26%), Positives = 341/731 (46%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L+EI E++PA + + + LK + + + +Y TP RL L + L+ Sbjct: 3 HDYLIEIGLEDMPAHVVTPSINQFHDKTVAFLKANHLEHGQIDRYATPRRLALLVHDLAA 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + GP G KA GF R G+ + K K D Sbjct: 63 KQADVETDVKGPAKKIAQDADGNWTKAAIGFSRGQGMTPDD--IVFKTIKGVDYVYLHKA 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++L ++ I+ + +P M+W F +IRP+ ++ +L + Sbjct: 121 IKGKDAAEILPGML-DVIKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDT 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G +T GHRF P+ + + D Y+ L++ V+++P R+ I + Sbjct: 170 VVPMKLLDVEAGRVTQGHRFLG-KPVTLPNADAYVAALKDQFVIVEPAARKQLIREQIEQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ ++ D DLLEE+ LVEW F G+FD KYL +PE ++ ++K NQ+ F R Sbjct: 229 IATDHQWQIELDSDLLEEVNNLVEWPTAFAGTFDPKYLAIPEAVLITSMKDNQRYFYARD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G + N FI V N D ++ GN +V+ ARLEDA F+ DQ Sbjct: 289 QAGKMVNAFIGVRNG-NHDHLNNVIAGNEKVLTARLEDAAFFYAEDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + + + + RL V FH KI + ++++R +V+ +A + A + Sbjct: 335 -------KRSIAEDVERLK--AVSFHDKISSMYDKMARTKVIAALLADQFGLTADEKADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 386 DRAASIYKFDLVTSMVGEFPELQGIMGEHYARLAGEKPAVAQAIAEHYEPIAADGALPQS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++ADKLD+L++F+A++ PSGS DPYALRR GI+R+I E+ L+ Sbjct: 446 LVGTVLAIADKLDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAEHDWPFALASLQPT 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q L F DR K L + IRHD+++A+ + ++ I+ Sbjct: 506 IAKALAEADQTNGLDFAAHQQELNDFMIDRAKQLLQGQKIRHDIVDAVTVRSDADIAGIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + + + + R+ +I + ++ + P E +L+ + Sbjct: 566 AAAKLLTQHAADSDFKPVMEALGRVLRI-----TGKQTVTTAVDPTKFENPTEGQLHDAV 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y L ++ +PI+ +FD +V DD+ VR+NRL+ LQ + + Sbjct: 621 TTTAKTFAAEPTEADYQ----ALKALAKPIDAYFDATMVMADDKTVRENRLATLQQLAKL 676 Query: 692 ILIVINVQKIV 702 I +V +++ Sbjct: 677 IRQFGDVSQVI 687 >gi|300812194|ref|ZP_07092636.1| glycine--tRNA ligase, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496830|gb|EFK31910.1| glycine--tRNA ligase, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 688 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 210/732 (28%), Positives = 349/732 (47%), Gaps = 79/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 3 KDFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTVLVKELDE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF R G+ I + KG Y V + Sbjct: 63 KQADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGMSADD---IYFEELKGVEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K + +++L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 120 QKAGKEAKEILLG-LDEVIKSMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R+ I++ + Sbjct: 170 -VVPVEFLDITAGRKTAGHRFLG-DSVVLANADDYVEALRDQYVIVDADERKAMIVSQIN 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 228 DLVNSHNWQIKLDASLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L N FI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 288 DQEGKLINYFISVRNG-NKDHLENVISGNEKVLVARLDDAVFFYDEDR------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 PL + R+D V FH KIG+ E+++R+R++G +A+ Sbjct: 335 --------KYPLSHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 385 FDRVSGLYKFDLVTQMVGEFAELQGVMGMHYARLAGENENVSVAIKEHYMPTTAEGDLPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q Sbjct: 445 TKVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ED+ L F DR+K +L + +D+I+A+L + I Sbjct: 505 EIVELLSGKTPAKLPQEAEEDKQLADFIRDRIKQFLQKNNYLYDVIDAVLASSEQDPSQI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L + + + S RI IL + + + P +E+ LY Sbjct: 565 LAAAKVLQQHHDDEAFKPVVESLTRIANILKKAKFSQ---ASPVDPSLFEDRSEQDLYNG 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + K + ++ + ++ I+ +FD ++ D V++NRLS L + + Sbjct: 622 VEALA-------NVKDHAELYEAFVALQGVIDRYFDVNMIMAKDEAVKNNRLSQLAAVND 674 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 675 LAKRLGDLSKLV 686 >gi|17545243|ref|NP_518645.1| glycyl-tRNA synthetase subunit beta [Ralstonia solanacearum GMI1000] gi|25009329|sp|Q8Y213|SYGB_RALSO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|17427534|emb|CAD14052.1| probable glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum GMI1000] Length = 697 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 210/718 (29%), Positives = 352/718 (49%), Gaps = 66/718 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G+ +P++ E+ Sbjct: 14 PPKALARLGEAFAQSLFDGLSAQGLLEEGAQVEGFATPRRLAASITGVRRAAPDRELREK 73 Query: 71 LGP------RVGAGK----KAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRL 119 + P G K + +S G TI+ +++ P K + + Sbjct: 74 VLPVNIAFDAEGKPTAPLTKKLAALAKSIGADTIAPESLERAPDGKAESLFHRYTARGAV 133 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L+ + I +P PK M + + ++RP ++ +L ++II Sbjct: 134 LADGLQAALSQTIAGLPIPKVMIYQRPNG--DNVQFVRPAHRLIALL-----DDEIIPAG 186 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASA 238 + + GN+T GHRF + I + Y L+ V+ R+ AI + + A A Sbjct: 187 VLGLQSGNVTLGHRFLSAGEIIIPHATAYASTLKSQGKVIAGYAERKEAIRAELLKAAGA 246 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +V + LL+E+ LVEW V+ F++++L +P+E + LT++TNQK F +G Sbjct: 247 D--TVVMPEALLDEVNALVEWPVVYPCHFEEQFLAVPQECLILTMQTNQKYFALTDAQGH 304 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSN+ A++ AI++GN RVV RL DA F++ D+ Sbjct: 305 LRNRFLIVSNL-ATETPQAIIEGNERVVRPRLADARFFFEHDK----------------- 346 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 KPL R+ +L VV+H KIGTQ ERVSR++ + ++A+ + A+VA RA +L+ Sbjct: 347 ---KKPLADRVPQL--ARVVYHNKIGTQLERVSRLQAIAGQLAEKLGAEVAHASRAALLA 401 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P V+ Sbjct: 402 KADLLTDMVGEFPELQGTMGTYYARHDGEAEDVALACSEHYQPRFAGDALPGTATGTVVA 461 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 LADKL+TL+ W I P+G KDP+ALRR LGI+R+++E + + +++ +E Sbjct: 462 LADKLETLVGIWGIGLAPTGEKDPFALRRHALGILRMLIEKPLALGIAEVLEAAAASFEG 521 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + F +DRL+ YL D+ + +EA++ L IV ++ + F + Sbjct: 522 IAAVKPDLAAITDFLYDRLRGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAAL 581 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KRI IL KK + PQ L +AE+ L+ ++ H+ ++ Sbjct: 582 PQAEALAAANKRITNIL----KKTDITIGSVQPQLLREDAERALHQAVATSEPHVHDAFA 637 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L S+ E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 638 RGDFTTALKTLASLREAVDSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKL 695 >gi|225025762|ref|ZP_03714954.1| hypothetical protein EIKCOROL_02666 [Eikenella corrodens ATCC 23834] gi|224941543|gb|EEG22752.1| hypothetical protein EIKCOROL_02666 [Eikenella corrodens ATCC 23834] Length = 687 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 209/710 (29%), Positives = 345/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L +I + Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLGRAQLIDGSAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + + + K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAKIENLTIVY--DGKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ +++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQSVKKLPIPKVMRWGS-----STFTFVRPVHGLVVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI + A + + Sbjct: 184 GNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALNEQAGRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F+K +L +P+E + LT++ NQK F G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEKHFLAVPQECLILTMQQNQKYFPLLDPNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +K + V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDRLPESKTATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ + + L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLGVNELIQTTFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVTAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + E+ L EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGEVDESLLQQNEEKALYAAAQGLQPKIAAAVVEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ K+ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLLNCLAEQMNAVADITKL 685 >gi|325686028|gb|EGD28086.1| glycyl-tRNA synthetase beta subunit [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 688 Score = 551 bits (1421), Expect = e-154, Method: Composition-based stats. Identities = 210/732 (28%), Positives = 351/732 (47%), Gaps = 79/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 3 KDFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTVMVKELDE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF R G+ I + KG Y V + Sbjct: 63 KQADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGMSADD---IYFEELKGVEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K + +++L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 120 QKAGKEAKEILLG-LDEVIKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R++ I++ + Sbjct: 170 -VVPVEFLDITAGRKTAGHRFLG-DSVVLANADDYVEALRDQYVIVDADERKDMIVSQIN 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 228 DLVNSHNWQIKLDTSLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L N FI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 288 DQEGKLINYFISVRNG-NKDHLENVISGNEKVLVARLDDAVFFYDEDR------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 PL + R+D V FH KIG+ E+++R+R++G +A+ Sbjct: 335 --------KYPLSHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 385 FDRVSGLYKFDLVTQMVGEFAELQGVMGMHYARLAGENENVSVAIKEHYMPTTAEGDLPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q Sbjct: 445 TKVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ED+ L F DR+K +L + ++D+I+A+L + I Sbjct: 505 EIVELLSGKTPAKLPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L + + + S RI IL + + + P +E+ LY Sbjct: 565 LAAAKVLQQHHDDKAFKPVVESLTRIANILKKAKFSQ---ASSVDPSLFEDRSEQDLYNG 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + K + ++ + ++ I+ +FD ++ D V++NRLS L + + Sbjct: 622 VEALA-------NVKDHAELYEAFVALQGVIDRYFDVNMIMAKDEAVKNNRLSQLAAVND 674 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 675 LAKRLGDLSKLV 686 >gi|217964396|ref|YP_002350074.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes HCC23] gi|254781854|sp|B8DE53|SYGB_LISMH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|217333666|gb|ACK39460.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes HCC23] gi|307571039|emb|CAR84218.1| glyS [Listeria monocytogenes L99] Length = 688 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 202/731 (27%), Positives = 339/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++G+ Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEGM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + +D K + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVDPAD--LTFRDIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + +P SM W + +IRP+K ++ + Sbjct: 119 KEVIGEKTSTLLPN-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF ++ Y L E V+++ E R+ AI+ Sbjct: 168 EEIIPFEITGVTTSNTSRGHRFLG-KSATIKQPSDYPNALLEQFVVVNAEERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++ G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQAGELLPHFVTVRNG-NHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 --------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEVI 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGSAELPGADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LNE + + + R+ +I E +E+ P E E+ L+ Sbjct: 564 IDRAQILNEHAEAEWFRPTIEALSRVVKIAKKYEDG-----VEVDPALFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDYAGLTIIER----LKAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|319409761|emb|CBY90067.1| glycyl-tRNA synthetase beta chain (glycine-tRNA ligase beta chain; GlyRS) [Neisseria meningitidis WUE 2594] Length = 687 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 213/710 (30%), Positives = 351/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + +L+ ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKLLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 GNKTLGHRFLSNGEITIENADSYAEQMREQGKVVASFAERKTAIQTALEGQACRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F R G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDRNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L ++VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--VNVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEITEAVEQHYQPRFAGDNLPEGKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRR+ LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRSALGILRMLMQYGLDVNELIQTAFNSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|291278668|ref|YP_003495503.1| glycyl-tRNA synthetase subunit beta [Deferribacter desulfuricans SSM1] gi|290753370|dbj|BAI79747.1| glycyl-tRNA synthetase, beta subunit [Deferribacter desulfuricans SSM1] Length = 682 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 222/727 (30%), Positives = 357/727 (49%), Gaps = 72/727 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LEI +EEIPA + AA L L++ + Y ++ TP RLFLY++ +S Sbjct: 1 MSFYILEIGTEEIPASFINPAANFLKEHFKNELEKNRINYSSIESGGTPRRLFLYIENIS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EE GP G K GF +S GL + +K D KG+ + Sbjct: 61 DRQADLEEEIKGPPANIAFDENGNLTKTALGFAKSKGLDVNTLRSVKTD--KGEYLVGTK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++LK +V I+ P+PKSM+W + + RP+ L I Sbjct: 119 KVKGEDTVNILKNLVVQTIKNFPFPKSMKWGDKN-----LRFARPIHWFLSIYNG----- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K+++ +++ I GN T+GHRF A IK+ S D Y L+E V++D R+ I + + Sbjct: 169 KVLEFEIEGIKAGNYTFGHRFMANKQIKISSFDEYKAKLKENFVIVDFNERKEIIRSFLN 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + + D+DLL+ + LVE+ +G F + +L LP+E++ ++K +QK F R Sbjct: 229 NI-----GNVFIDEDLLDTVANLVEYPHPILGEFPEHFLQLPKEVLITSMKNHQKYFY-R 282 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G + N F+ +SN + D + I G RV+ ARL DA+ F++ D+ Sbjct: 283 EKDGKILNSFVGISNTKPKD-DSLIKSGYERVLKARLNDAMFFFENDK------------ 329 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVD 412 PL++RM +L VV+ ++GT E++ R R + +A+ + + D Sbjct: 330 --------KVPLEERMEQLK--KVVYQEQLGTSYEKMERFREIALFLAKKLAPNKATTTD 379 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L KADL TE+V EFPELQG +G+EYA++Q E DAI EH PR + +P Sbjct: 380 RAAFLCKADLMTEMVYEFPELQGVMGREYALIQGEEQLVADAIFEHYLPRFSGDELPKTD 439 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 +S+ADK+DT+ + I P+G+ DPYALRR +GII IIL + L++ +E Sbjct: 440 EGAFISIADKIDTITGCFIIGLIPTGNNDPYALRRNAIGIINIILNKNYRLSLTELLEKA 499 Query: 532 ----------------QNLILFFHDRLKLYLHDR-DIRHDLIEAILRPENDNLLTIVDLI 574 + F R K + +IR D+ EA++ D+++ I + Sbjct: 500 IDNYKDKLSYQKEEILEKTKEFILTRAKQIATSQYNIRADVFEAVVAV-FDDIVQIFNAA 558 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K LNE + + S KRI KN + E L+ EK L +I + Sbjct: 559 KALNEVYEKPEFVTLSTSYKRIS----NILNKNNWNNTEYKEDLLVESEEKELNKLIKEN 614 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + + ++Y+ ++L S +P++ FFD VLV + E+R+NRLSLL +K + Sbjct: 615 EEKLNQLLSEEKYNDAINVLLSFSKPVDNFFDNVLVMDKNEEIRNNRLSLLAKLKTLFEK 674 Query: 695 VINVQKI 701 + + I Sbjct: 675 IGELSLI 681 >gi|290894220|ref|ZP_06557189.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL J2-071] gi|290556217|gb|EFD89762.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL J2-071] Length = 688 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 201/731 (27%), Positives = 339/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++G+ Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEGM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + +D + Sbjct: 61 AEEQANRVEEAKGPAKKIALDEEGNWSKAALGFAKSQKVDPAD--LTFRDINGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + + +P SM W + +IRP+K ++ + Sbjct: 119 KEVIGEKTSTLLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF ++ Y L E V+++ E R+ AI+ Sbjct: 168 EEIIPFEITGVTTSNTSRGHRFLG-KSATIKQPSDYPNALLEQFVVVNAEERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++ G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQAGELLPHFVTVRNG-NHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 --------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEVI 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGSAELPGADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LNE + + + R+ +I E +E+ P E E+ L+ Sbjct: 564 IDRAQILNEHAEAEWFRPTIEALSRVVKIAKKYEDG-----VEVDPALFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDYAGLTIIER----LKAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|325143641|gb|EGC65960.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M01-240013] Length = 686 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 212/710 (29%), Positives = 350/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 15 PPKALNNLGNHFAASVAEGLEKAQLIAGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 75 GPAVANAVKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 133 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 183 GNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 243 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 303 LVSNLQTAD-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 342 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 400 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 460 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L +V ++ + F + Sbjct: 520 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 579 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 635 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 684 >gi|291612940|ref|YP_003523097.1| glycyl-tRNA synthetase, subunit beta [Sideroxydans lithotrophicus ES-1] gi|291583052|gb|ADE10710.1| glycyl-tRNA synthetase, beta subunit [Sideroxydans lithotrophicus ES-1] Length = 716 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 213/735 (28%), Positives = 360/735 (48%), Gaps = 82/735 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + K + + + LKE+ ++ +N Y TP RL + + + P+++ ER Sbjct: 15 PPKALEKLSTTFANEVFASLKEQALLNENSVCTPYATPRRLAMSITEVEQQQPDRVIERK 74 Query: 72 GPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVL 124 GP V G KA++GF+RS + ++ + K + ++A + + + +++ L Sbjct: 75 GPAVAAGLDAEGKPTKALEGFMRSANVTLGQLQRVGE--GKAEYFVARIEQKGKSLDEHL 132 Query: 125 KTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIP 184 +V A++K+P PK MRW ++RP+ + + ++I+ ++ + Sbjct: 133 PEMVTQALKKLPVPKLMRWGDFEH-----QFVRPVHGLTIL-----HGKRIVPAEVLGLS 182 Query: 185 CGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLEL 243 GN+T GHRF + + ++ D Y L V+ RR +I+ LA Sbjct: 183 SGNVTSGHRFLSSERVTIEHADDYEATLARDGRVVASFTQRRESIVARLDDLAEQNKAIW 242 Query: 244 VEDKD-------------------LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 V + LL+E+ GLVEW +V++G F+ ++L +P+E + LT++ Sbjct: 243 VGHANFDLEKLLSMSNDERGVLSNLLDEVTGLVEWPEVYVGQFEAEFLDVPQECLILTMQ 302 Query: 285 TNQKCFVTRTRE-GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 NQK F G L N F++VSN+Q SD I++GN RVV RL DA F+ +D+ Sbjct: 303 QNQKYFPLLDASSGKLLNKFLIVSNMQVSD-PHHIIEGNQRVVRPRLADARFFFNQDR-- 359 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 + L+ R+ +L +VV+H K+G+Q +RV RI L IA+L Sbjct: 360 ------------------KQKLESRVEKLG--NVVYHNKLGSQLQRVERITTLAGTIARL 399 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 ++AD A + A L KADL T++V EFPELQG IG+ YA E++ +AIE H PR Sbjct: 400 LEADKAQAELAARLCKADLLTDMVGEFPELQGIIGRYYAFHDGEDLEVANAIEAHYHPRF 459 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN---- 519 +++P ++ +V+LADKL+T++ + I + P+G KDP+ LRR LGI+RI++E Sbjct: 460 AGDSIPMGAVACSVALADKLETVVGIYGIGQVPTGDKDPFGLRRQALGILRILIETPLDL 519 Query: 520 -----------KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++ F DRL+ YL DR IEA+L N L Sbjct: 520 PLPALLKATADNFPAGMLSATVAADVEGFMMDRLRGYLRDRSFDVSHIEAVLAVLNGRLH 579 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI--EEKKNREISLEISPQYLLLEAEKR 626 ++ ++ + F + + + KR+ I+ EE + + + EAE+ Sbjct: 580 EVLPRLQGVRAFAAMTVAKDLAAANKRVQNIMRKNHEELGAAMANAVFDAKLMTDEAERN 639 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L+ ++D Q Y Q L ++ I+ FFDQV+V DD+++R NR LL+ Sbjct: 640 LHQAMTDIAPFAQGYFSRGEYGQNLKTLVTLKPFIDDFFDQVMVMADDQKLRINRALLLR 699 Query: 687 YIKNIILIVINVQKI 701 + N++ V ++ K+ Sbjct: 700 QLANLMNQVADISKL 714 >gi|325127445|gb|EGC50375.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis N1568] Length = 686 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 208/710 (29%), Positives = 347/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 15 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 75 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 133 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 183 SNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 243 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 303 LVSNLQTAD-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + A A +RA L+KADL T Sbjct: 342 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGAGAAAAERAARLAKADLVT 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 400 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 460 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 520 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 579 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 635 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 684 >gi|302036970|ref|YP_003797292.1| glycyl-tRNA synthetase subunit beta [Candidatus Nitrospira defluvii] gi|300605034|emb|CBK41367.1| Glycyl-tRNA synthetase, beta subunit [Candidatus Nitrospira defluvii] Length = 724 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 208/739 (28%), Positives = 351/739 (47%), Gaps = 78/739 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI +EE+P + A L LLK+ + Y +R TP RL L ++GL+ Sbjct: 21 ELLLEIGTEELPYQFVAPAMRALQQSTETLLKDLRLTYGAVRTMGTPRRLVLLIEGLARQ 80 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++E +GP G +A GF G+ + KG+ AV ++ Sbjct: 81 QASAVKEAMGPSKSVAFDQNGQPTRAAVGFAAGQGIPVEDLQ--VRQTPKGEYLFAVKQE 138 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + VL +P + K+ +PK+M W + + RP++ ++ + K+ Sbjct: 139 KGQAVAAVLIQALPQLLGKLSFPKAMHW-----NQTGVRFARPVRWLVALCGG-----KV 188 Query: 176 IDLDLKEIPCGNITYGHRFHA-----PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 + + I GN+++GHR P V+S+ HY+++ E V++D E RR IL+ Sbjct: 189 LPIQFATIKAGNLSHGHRVLGAKVSSPKGFAVKSIAHYLKETERHGVIVDQERRRTMILD 248 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 LA + L +D DLLE+ + +VE +GSF YL LP+E++ ++K +Q F Sbjct: 249 QLASLAKSARGHLHQDDDLLEQAVYMVESPLTILGSFKPHYLSLPKEILMTSMKEHQGYF 308 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++G L F+ V+N++ S+ I +GN RV+AARL DA F+ D+ Sbjct: 309 SLVDQKGALLPNFLAVTNMKLSNM-QLIREGNERVLAARLADAKFFFDEDR--------- 358 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--V 408 L R+A+ L V FH K+G+ ++ R+ + +A + + V Sbjct: 359 -----------KTSLIDRVAK--QLAVTFHQKLGSLHQKTQRVVAMAAHVAGQLGDERLV 405 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA LSKADL T IV EFP LQG +G EYA E+ AI E PR + Sbjct: 406 QDCRRAAELSKADLLTGIVGEFPTLQGLMGGEYAKHDGESPVVSAAIREQYMPRAMEGEL 465 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +SLAD+LD++ F+ + PSGS+DP+ALRR I+RI++E+K+ + L+Q Sbjct: 466 PESLAGKVLSLADRLDSIAGFFLVGLVPSGSEDPFALRRHATAIVRIVIESKLRLNLAQA 525 Query: 529 IE---------------------DQNLILFFHDRLKLYLHDRDI-RHDLIEAILRPEND- 565 + ++I F +R++ Y R D++EA+L+ + Sbjct: 526 VRAAQDVLSGQNVAAAPQSGKAGAPDVIGFLFERVRFYGKSAHQLRDDVMEAVLKSADRQ 585 Query: 566 --NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +L + D +K L + A+ + ++ KR ++ E+ + + A Sbjct: 586 TIDLTDLFDKMKALQQITVRAEFDPLIVGFKRAHRLTEKEQWDRKP----VESGLFREAA 641 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E L+ + +M +Y + D+L + PI+ FF+ V+VN +D VR NRLS Sbjct: 642 EPALHQTVQSSHQEYAAAMGGGKYGEALDVLVRMKGPIDDFFNAVMVNAEDPAVRGNRLS 701 Query: 684 LLQYIKNIILIVINVQKIV 702 LL+ + ++ + + +I+ Sbjct: 702 LLKSVDDLFMSFADFSQIM 720 >gi|207727975|ref|YP_002256369.1| glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum MolK2] gi|206591218|emb|CAQ56830.1| glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum MolK2] Length = 697 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 208/718 (28%), Positives = 350/718 (48%), Gaps = 66/718 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G+ +P++ E+ Sbjct: 14 PPKALARLGEAFAQSLFDGLSAQGLLEEGAQVEGFATPRRLAAAIAGVRRAAPDRELREK 73 Query: 71 LGP------RVGAGK----KAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRL 119 + P G K + +S G+++I+ +++ P K + L Sbjct: 74 VLPVNIAFDAEGKPAAPLVKKLAALAKSVGVESIAPETLERAPDGKAESLFYRYTARGAL 133 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L+ + I +P PK M + + ++RP ++ +L +++I Sbjct: 134 LADGLQAALTQTIAGLPIPKVMTYQRPSG--DSVQFVRPAHRLIALL-----DDEVIPAR 186 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASA 238 + + GN+T GHRF + I + Y L+ V+ R+ AI + + A A Sbjct: 187 VLGLQSGNVTLGHRFLSAGEIVIPHATAYASTLKSQGKVIAGYAERKEAIRAELLKAAGA 246 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +V + LL+E+ LVEW ++ F++++L +P+E + LT++TNQK F +G Sbjct: 247 D--TVVMPEALLDEVNALVEWPMIYPCHFEEQFLEVPQECLILTMQTNQKYFALTDAQGH 304 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSN+ A+D AI++GN RVV RL DA F++ D+ Sbjct: 305 LRNRFLIVSNL-ATDTPQAIIEGNERVVRPRLADARFFFEHDK----------------- 346 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 KPL R+ L VV+H KIGTQ ERVSR++ + ++A + ADVA RA +L+ Sbjct: 347 ---KKPLADRVPLL--ARVVYHNKIGTQLERVSRLQAIAGQLADKLGADVAHASRAALLA 401 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P V+ Sbjct: 402 KADLLTDMVGEFPELQGTMGTYYARHDGEAADVALACSEHYQPRFAGDALPGTATGTVVA 461 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF---------- 528 LADKL+TL+ W I P+G KDP+ALRR LGI+R+++E + + +++ Sbjct: 462 LADKLETLVGIWGIGLAPTGEKDPFALRRHALGILRMLIEKPLALGIAEVLEVAAASFEG 521 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + + F +DRL+ YL D+ + +EA++ L IV ++ + F + Sbjct: 522 IAAVKPDPAAITDFLYDRLRSYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAAL 581 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KRI IL KK + PQ L +AE+ L+ ++ H+ ++ Sbjct: 582 PQAEALAAANKRITNIL----KKTDIAIGSVQPQLLKEDAERALHQAVATSEPHVHDAFA 637 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L + E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 638 RGDFTTALKTLAGLREAVDSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKL 695 >gi|116690722|ref|YP_836345.1| glycyl-tRNA synthetase subunit beta [Burkholderia cenocepacia HI2424] gi|116648811|gb|ABK09452.1| glycyl-tRNA synthetase beta chain [Burkholderia cenocepacia HI2424] Length = 699 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 201/714 (28%), Positives = 335/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + + L +I +Y TP RL + ++ + +P+K E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELVFERYATPRRLAVVVQNVRAVAPDKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNASIADLERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + A+ K+P PK M + S ++RP+ + + ++++ + + Sbjct: 139 LQAALDEALAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGV 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ +L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPQL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADTAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLHTAHARFAGVPGV 526 Query: 531 ---DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEIDAVLSLNPTRIDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRVPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKL 697 >gi|254670880|emb|CBA07393.1| glycine tRNA synthetase beta subunit [Neisseria meningitidis alpha153] Length = 687 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 211/710 (29%), Positives = 347/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + V+ R+ AI A ++ + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARSLNAAVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|308390028|gb|ADO32348.1| putative glycyl-tRNA synthetase beta subunit [Neisseria meningitidis alpha710] gi|325201431|gb|ADY96885.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M01-240149] Length = 687 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 210/710 (29%), Positives = 349/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTAD-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|199598418|ref|ZP_03211837.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus rhamnosus HN001] gi|199590737|gb|EDY98824.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus rhamnosus HN001] Length = 689 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 197/731 (26%), Positives = 340/731 (46%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L+EI E++PA + + + LK + + + +Y TP RL L + L+ Sbjct: 3 HDYLIEIGLEDMPAHVVTPSINQFHDKTVAFLKANHLEHGQIDRYATPRRLALLVHDLAA 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + GP G KA GF R G+ + K K D Sbjct: 63 KQADVETDVKGPAKKIAQDADGNWTKAAIGFSRGQGMTPDD--IVFKTIKGVDYVYLHKA 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++L + I+ + +P M+W F +IRP+ ++ +L + Sbjct: 121 IKGKDAAEILPGM-HDVIKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDT 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G +T GHRF P+ + + D Y+ L++ V+++P R+ I + Sbjct: 170 VVPMKLLDVEAGRVTQGHRFLG-KPVTLPNADAYVAALKDQFVIVEPAARKQLIREQIEQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ ++ D DLLEE+ LVEW F G+FD KYL +PE ++ ++K NQ+ F R Sbjct: 229 IATDHQWQIELDSDLLEEVNNLVEWPTAFAGTFDPKYLAIPEAVLITSMKDNQRYFYARD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G + N FI V N D ++ GN +V+ ARLEDA F+ DQ Sbjct: 289 QAGKMVNAFIGVRNG-NHDHLNNVIAGNEKVLTARLEDAAFFYAEDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + + + + RL V FH KI + ++++R +V+ +A + A + Sbjct: 335 -------KRSIAEDVERLK--AVSFHDKISSMYDKMARTKVIAALLADQFGLTADEKADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 386 DRAASIYKFDLVTSMVGEFPELQGIMGEHYARLAGEKPAVAQAIAEHYEPIAADGALPQS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++ADKLD+L++F+A++ PSGS DPYALRR GI+R+I E+ L+ Sbjct: 446 LVGTVLAIADKLDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAEHDWPFALASLQPT 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q L F DR K L + IRHD+++A+ + ++ I+ Sbjct: 506 IAKALAEADQTNGLDFAAHQQELNDFMIDRAKQLLQGQKIRHDIVDAVTVRSDADIAGIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + + + + R+ +I + ++ + P E +L+ + Sbjct: 566 AAAKLLTQHAADSDFKPVMEALGRVLRI-----TGKQTVTTAVDPTKFENPTEGQLHDAV 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y L ++ +PI+ +FD +V DD+ VR+NRL+ LQ + + Sbjct: 621 TTTAKTFAAEPTEADYQ----ALKALAKPIDAYFDATMVMADDKTVRENRLATLQQLAKL 676 Query: 692 ILIVINVQKIV 702 I +V +++ Sbjct: 677 IRQFGDVSQVI 687 >gi|292670216|ref|ZP_06603642.1| glycyl-tRNA synthetase [Selenomonas noxia ATCC 43541] gi|292648168|gb|EFF66140.1| glycyl-tRNA synthetase [Selenomonas noxia ATCC 43541] Length = 683 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 202/733 (27%), Positives = 327/733 (44%), Gaps = 83/733 (11%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI +EEIPA + DL + L+++ + Y+N+R TP R L + GL Sbjct: 1 MSKDLLLEIGTEEIPAHVMPHLLSDLKRLAGEQLRDQRLSYENLRTIGTPRRAALIVTGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP V G KA +GF R G+ + I++D A Sbjct: 61 AERQEDVSTETRGPSVAIAFDAAGNPTKAGEGFARGQGIDPSA--LIQRDG----YVYAS 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +L ++P I+ +P P SMRW F +IRP++ ++ + E Sbjct: 115 VHEKGAETARLLTELLPELIRSIPLPNSMRWGDLD-----FRFIRPIRWLVALYGTET-- 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + L + GN++ GHR AP + S Y E A +++DPE RR I Sbjct: 168 ---VPFMLANVTSGNMSRGHRTLAPADFIIPSPADYEAACERAHIIVDPERRRAMICEQI 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A A G DLLEE++ LVE+ G+F+++YL LP E + ++ +Q+ F Sbjct: 225 AETAKACGGTAEITPDLLEEVLYLVEYPTALSGAFEERYLALPAEAVITPMRDHQRYFPV 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + +G L FI V N + + GN RV+ ARL DA F+ D+ Sbjct: 285 KAADGSLLPVFITVRNGG-KEHLDVVAHGNERVLRARLADAQFFFDEDRR---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD----- 407 K L + +L VVF +G+ E+ R+ L I + I D Sbjct: 334 ----------KSLAEHREKLKT--VVFQQGLGSMYEKTERLMGLVTAIVEEIAPDDAVYE 381 Query: 408 --VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 + RA LSKADL T +V EF ELQG +G+EYA+L E + AI+E PR Sbjct: 382 VMSSDARRAAELSKADLVTGMVTEFTELQGIMGREYALLDGEKPAVARAIDEQYMPRFAG 441 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P + +S+ADK+D ++ ++ + P+GS+DP+ALRR LG++ +++E + + L Sbjct: 442 DELPQTPLGFALSVADKIDNIVGTFSRGKIPTGSQDPFALRRQALGLVLMLIEQESGLLL 501 Query: 526 SQFIE----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 S ++ ++ F RLK L +R +R+D+ EA+L + D + Sbjct: 502 SDLVDEACDLYALDEDKREKMQADVADFIRLRLKNVLTERGVRYDVQEAVLA-DVDFVAN 560 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + ++ + + S R+ I + E+ + E L + Sbjct: 561 VPVRAAYVERLLKENGADALVQSFVRVGNIARMAER------TTLDTDLFQAAEEGALLS 614 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + S+ + I+ FFD V+V D ++ NRL+LL+ I Sbjct: 615 AYENAAAARAGG------EDTLAAERSLAQAIDAFFDAVMVMDKDARIKINRLTLLKTID 668 Query: 690 NIILIVINVQKIV 702 + +L + KIV Sbjct: 669 DYLLETADYSKIV 681 >gi|325268032|ref|ZP_08134678.1| glycyl-tRNA synthetase beta subunit [Kingella denitrificans ATCC 33394] gi|324980417|gb|EGC16083.1| glycyl-tRNA synthetase beta subunit [Kingella denitrificans ATCC 33394] Length = 705 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 211/696 (30%), Positives = 349/696 (50%), Gaps = 57/696 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLK 57 M L+E+++EE+P + ++ L+ + L++ +I Y +P RL + + Sbjct: 26 MSQTLLIELFTEELPPKALNQLGNHLAQSIAEGLEKAQLIDGATEYTAYASPRRLAVQVA 85 Query: 58 GLSPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + ++ + GP V A +KAI+GF RS G++ S + K DVY + Sbjct: 86 RVKSEQADQHIVKKGPAVTANEKAIEGFARSCGVEKSSLHIVH--DGKQDVYAHEFTQKG 143 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + + +L IV A++K+P PK MRW + S +++RP+ ++ + AE ++ Sbjct: 144 QKLAALLGDIVNAAVKKLPIPKVMRWGS-----STHTFVRPVHGLVAMHGAE-----VLP 193 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLA 236 +++ + N T GHRF + I D Y L EE V+ R+NAI A Sbjct: 194 INVLGLDSRNCTLGHRFLSHGEITFAKADDYAAQLAEEGKVIASFAERKNAIRTALDEQA 253 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + + + D+ LL+E+ LVE+ V +F++ +L +P+E + LT++ NQK F + Sbjct: 254 ARLNATVAADEALLDEVTALVEYPVVLQAAFEEHFLAVPQECLILTMQQNQKYFPLLNQN 313 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 314 GKLMNRFLLVSNLQTKD-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------- 357 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 L+ R+ +L +VV+H KIG+Q ERV R++ + IA ++AD A+ +RA Sbjct: 358 -----KATLESRLPKL--ANVVYHNKIGSQAERVERLQTIAAYIAGCLNADKAVAERAAR 410 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL TE+V EFPELQG +GK YA L E A+E+H +PR + +P + I Sbjct: 411 LAKADLVTEMVGEFPELQGTMGKYYAQLDGETPEIAAAVEQHYRPRFAGDALPESTIGTA 470 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI------------- 523 V+LADKL+TL+ W I P+G KDPYALRR+ LG++R+++ + + I Sbjct: 471 VALADKLETLVGIWGIGLIPTGDKDPYALRRSALGVLRMLMNHDLSIRELLTFVFDSFPK 530 Query: 524 PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L + F RL + L D D++ A+L D + + ++ + +F Sbjct: 531 GLLAEKTVAEVADFMQARLAVLLQ-NDYPQDVVAAVLAQRPDRVNNLTAKLQAVVQFKQL 589 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ +L KK+ + + EK L+A + D +Q ++D Sbjct: 590 PESAALAAANKRVQNLL----KKSEGALGNVDAALQQQDEEKALFAAVQDLQPKVQAALD 645 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + + L ++ ++ FFD V+V D V+ Sbjct: 646 AQDFAAALSALAAVKPQVDAFFDGVMVMAADAAVKQ 681 >gi|254414262|ref|ZP_05028029.1| glycyl-tRNA synthetase, beta subunit [Microcoleus chthonoplastes PCC 7420] gi|196178937|gb|EDX73934.1| glycyl-tRNA synthetase, beta subunit [Microcoleus chthonoplastes PCC 7420] Length = 722 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 190/719 (26%), Positives = 324/719 (45%), Gaps = 73/719 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L L E + ++++ Y TP RL + ++GL Sbjct: 9 MPTFLLEVGTEELPANFVESAIKQWQSRLSQSLDEYLLTPESIQVYGTPRRLAILIQGLP 68 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP V G KA +GF R G+ ++ KKG+ V + Sbjct: 69 RQQPDREEEVKGPPVKAAFKDGKPTKAAEGFARKQGVSLDDLEI--RETKKGEFVFVVKK 126 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L ++P I + + M W + RP++ ++ +L + Sbjct: 127 IIGRSAIEILPEVIPQWIFGLEGKRFMCWGDGD-----LRFSRPIRWLVALLDDTVLPIE 181 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + I + GHR P + + + Y++ LE A V+++ + R+ I + Sbjct: 182 LVNGS-ETIKSDRTSRGHRILHPESVTIAKAEDYVKSLESAFVIVERDRRKQIIQDQVQS 240 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A + + ++L +E+ LVE+ +G FD +YL LP E+++ + +Q+ F Sbjct: 241 AAQKLKGHTLLYEELWDEVTDLVEYPTAIVGQFDAEYLILPPEVVKTVMVKHQRYFPVFK 300 Query: 295 REG--VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 E L FI +SN + I GN RV+ ARL D +F+K D Sbjct: 301 DETATELLPHFITLSNGDP-EKSEIIAAGNERVIRARLADGEYFYKTD------------ 347 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---A 409 L+ PL+ + +L+ V F ++G+ ++V RI +IA+ + Sbjct: 348 --------LASPLESYLPKLET--VTFQDELGSMRQKVGRIEKTASRIAEQLAVSQKQWD 397 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA L KADL T++V EFPELQG IG++YAV+ E+ + AI EH PRG + +P Sbjct: 398 DIIRAAALCKADLVTQMVYEFPELQGVIGQKYAVVSGESEAVATAIFEHYLPRGAGDKLP 457 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 V LAD+LDTL++ + + P+GS DP+ALRRA ++ I E + I L Q + Sbjct: 458 ETLTGQVVGLADRLDTLVSIFGLGMIPTGSSDPFALRRAANAVVNITWEGNLGINLDQLL 517 Query: 530 ED----------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPEN-------- 564 +D + L FF R++ L D + I +DL+ A+L + Sbjct: 518 QDVSADFVATYSEKSSPVEALQEFFIQRIRTLLQDEQKIDYDLVNAVLGENDREYTQRAL 577 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK--NREISLEISPQYLLLE 622 ++L + D L + K ++ + R ++ + + + P Sbjct: 578 KDVLDVRDRALFLQGIRKNGKLDEIYETVNRSARLSMQGDLDFQQLDPKAVVRPDLFEKS 637 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ----VLVNVDDREV 677 +E Y + Q + + Y QI D L + + FFD V+V ++ E+ Sbjct: 638 SEPAFYDALVALVPRTQAAQQERNYQQIVDALAEVTPIVSTFFDDKEAGVMVMDENPEI 696 >gi|225182111|ref|ZP_03735539.1| glycyl-tRNA synthetase, beta subunit [Dethiobacter alkaliphilus AHT 1] gi|225167198|gb|EEG76021.1| glycyl-tRNA synthetase, beta subunit [Dethiobacter alkaliphilus AHT 1] Length = 695 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 203/727 (27%), Positives = 341/727 (46%), Gaps = 67/727 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 LLEI EEIPAR A E L L E + + + TP RL L + L+ Sbjct: 5 TLLLEIGMEEIPARFMEPALEQLEKNARAALTEARLSFGTVSTLGTPRRLTLLVADLADK 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E++ GP G KA GF RS G+ D ++ + AV + Sbjct: 65 QADLSEKKKGPAKKAAFDAEGNPTKAAMGFARSQGVSV--DELFTEEISSVEYVFAVKNE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L + I+++ +PK M W + RP++ + + E+ Sbjct: 123 AGGETLAILPELCTRLIRELSFPKPMFW-----FSKEIRFARPIRWLAALY-----GEQE 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G TYGHRF + P+ + + Y+ +EE V++DP R I+ + Sbjct: 173 VPFSFAGLTAGRTTYGHRFLSEGPLVLPNASAYLSAMEENSVVVDPAERSKLIVAQVEQA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+A+G D+DLLEE++ LVE+ + +G+F ++L +P+E++ ++ +Q+ F Sbjct: 233 AAALGGRSEVDQDLLEEVVNLVEYPKAVVGNFAAEFLEVPQEVLITAMRAHQRYFPVFDE 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 VL FI +SN + + GN RV+ ARL DA F++ D+ Sbjct: 293 NDVLLPHFITISNGTRDEYLDNVRAGNERVLRARLADARFFFEEDR-------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA- 414 KPL + LD D+VF +GT ++ R++ L +++A D + + A Sbjct: 339 ------KKPLADFVTMLD--DIVFMEPLGTMRKKTERLKSLAEELAAEAGYDQSTREAAS 390 Query: 415 --IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 LSKADL T +V EFPELQG +G YA L E+ A+EEH PR ++ + Sbjct: 391 RGAYLSKADLMTHMVYEFPELQGTMGMHYARLSGESEDVSRAVEEHYAPRFAGDSPAKSA 450 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 V++ADK+DTL + + PSGS+DPYALRR+ LG++ +LE+++ + L++ Sbjct: 451 AGAMVAIADKMDTLAACFGLGLIPSGSQDPYALRRSALGVVATMLEHQLTMSLNRLCALA 510 Query: 531 ---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + F R++ ++ +R+D+I+A L E D+L I+ + Sbjct: 511 LEGLTQDITRPAAEVVGEMEEFLWQRVRFLFAEKGLRYDVIDASLGAEADDLPGILARAE 570 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L + + + L R + +++N +S + L+ AEK L+ + Sbjct: 571 ILQSKLDTPELTRILTPFTRAANLTRDVQEQN------VSVESLVEPAEKELFQAAGEAK 624 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + + + L + PI+ FF+ V+V V+D V+ NRL+LLQY+K + L + Sbjct: 625 DVVDNAAARGDFAAVFAALSPLYAPIDRFFNDVMVMVEDEAVKLNRLALLQYVKALFLHL 684 Query: 696 INVQKIV 702 ++ KIV Sbjct: 685 GDLSKIV 691 >gi|254672590|emb|CBA06277.1| glycine tRNA synthetase beta subunit [Neisseria meningitidis alpha275] Length = 687 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 213/710 (30%), Positives = 348/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLVVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALEGQARRLNASVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEQTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|227529169|ref|ZP_03959218.1| glycine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] gi|227350894|gb|EEJ41185.1| glycine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] Length = 691 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 352/733 (48%), Gaps = 75/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + +LLE+ EE+PA + + + L + LKE+ + + ++++ TP RL L + GL Sbjct: 1 MANSYLLEVGVEEMPAHVVTPSIKQLHERVANYLKEQRISFDEIQEFATPRRLALLIHGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S P+ E GP G KA GF R G K+ K + Sbjct: 61 SDKQPDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQGASVDDIEF--KEVKGVEYVFVE 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +VL+ +P I + +P M+W + +IRP++ ++ +L Sbjct: 119 KHISGKPVAEVLQG-LPDVITSMNFPTLMKWG-----YNNLQFIRPIRWLVSLL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ + ++ G IT GHRF ++++ Y + L + V+ D R+ I Sbjct: 168 DQVVPFKILDVEAGRITRGHRFLGHE-VELKQATDYEKSLHDDFVIGDQTKRKQLIEKQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++ SA + D DLLEE+ LVEW F GSFDKKYL LP ++ ++K NQ+ F Sbjct: 227 DKIVSANDWVIDTDPDLLEEVNNLVEWPTAFAGSFDKKYLVLPNAVLITSMKDNQRFFYL 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R EG L+ FI V N +D +++GN RV+ RLEDA F++ DQ Sbjct: 287 RDHEGNLSPNFIAVRNG-NTDYLENVIKGNERVLVPRLEDAKFFYEEDQ----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +D+ + RL V FH KI + +++ R+ ++ + + ++ ++A Sbjct: 335 ---------KISIDEYVERLKR--VSFHDKISSMYDKMQRVAIIAAVLGKRLNFSDEELA 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA + K DL T++V EF ELQG +G+ YA L E + AI EH P ++P Sbjct: 384 DLDRAAHIYKFDLTTQMVGEFAELQGVMGEIYAKLFGEKPAVAQAIREHYMPVSAEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +KI +++ADKLD++++F+A++ PSGS DPYALRR GI+RII ++ +PL Sbjct: 444 ESKIGAALAIADKLDSIMSFFAVDMIPSGSNDPYALRRQAFGIVRIIADSNWHLPLLNIQ 503 Query: 530 --------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + FF DR+ L + ++HD+I+A+ ++ ++ Sbjct: 504 PEIVKAFDEAGLDVDIDISKNAAQVRSFFMDRIHQLLSGQHMKHDVIDAVTDTQSADIEN 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++D + + + + R+ +I +K N + S+++ P +E++LY Sbjct: 564 VLDAANAIKAHHDDENFKGVVEALTRVLRI---AKKGNNDSSVKVDPSLFQNPSEQKLYD 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + + L S+ I +FD+ ++ D V++NRL+ L + Sbjct: 621 AVNDLVDKSSQRTVEDNF----AALRSLAPIISEYFDENMIMDKDENVKNNRLTQLGILA 676 Query: 690 NIILIVINVQKIV 702 ++ N+ K++ Sbjct: 677 RQTYLIGNLDKLI 689 >gi|300768135|ref|ZP_07078040.1| glycyl-tRNA synthetase beta subunit [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494199|gb|EFK29362.1| glycyl-tRNA synthetase beta subunit [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 694 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 197/733 (26%), Positives = 345/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +LLEI EE+PA + + L ++ LK+ + +++++ + TP RL + + GL Sbjct: 1 MAKTYLLEIGLEEMPAHVVTPSVLQLKERMVKFLKDARLDFEDVKTFSTPRRLTVQVLGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + +E GP G KA GF + G T + KD K Sbjct: 61 ADKQADVKKEVRGPAKKIAQDADGNWTKAAIGFSKGQGASTDD--IVFKDVKGTPYVFVQ 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +VL + I K+ +P M+WST +F +IRP++ I+ +L Sbjct: 119 TFTAGKTAAEVLAAGIEDVITKMNFPTMMKWSTY-----SFKYIRPIRWIVSLL-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ + + ++ G ++ GHRF +++ + Y DL V+ D R+ I Sbjct: 169 DEVVPVQILDVAAGRVSRGHRFLGHD-VEIATAADYEADLASVQVIADAAKRKATIREQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ ++ ++DLLEE+ LVE+ F G FD KYL +P+E++ +++ +Q+ F Sbjct: 228 AALANERDWQIKVNEDLLEEVNNLVEYPTAFAGDFDTKYLTIPDEVLITSMRDHQRFFYV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 E L F+ V N +D + GN +V+ ARLEDA F+ DQ Sbjct: 288 TDAEDNLLPHFVSVRNG-NTDHLENVALGNQKVLTARLEDAAFFYHEDQQ---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 + + + RL V FH KIGT E++ R+ V+ +A + Sbjct: 337 ----------HSIQEYVERLK--KVSFHDKIGTMYEKMQRVMVISDFLADRFGLTETEKN 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G +YAVL+ E+ + AI EH P ++P Sbjct: 385 QLHRAAQIYKFDLVTGMVGEFPELQGVMGDKYAVLKGEDPAVGQAIREHYMPISADGDLP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +K+ +++ADK+D++ +F+A+ PSGS DP+ALRR GI+RI+ E D P+ Q Sbjct: 445 KSKVGAVLAIADKVDSITSFFAVGLTPSGSNDPFALRRQAFGIVRIVREQGWDFPIRQLE 504 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 D + F DR+K + ++R IR+D+I+ +++ ++ Sbjct: 505 ADIQKELVAHDATYNLDFEKQTAPVADFLTDRVKQWFNNRKIRYDIIDTVIKGSRQDIRE 564 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + LN + + + + R+ +I A + ++ + P EAE+ LY Sbjct: 565 MFKAADVLNAHQDDPQFKDTIEAFTRLLRITAKAKLAAGDL--TVDPSLFENEAEQHLYD 622 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + +M + L ++ I +F+Q +V D +VRDN L L I Sbjct: 623 AVLELQKQFTPAMSMED---RFKALAALRPLIVDYFEQTMVMSKDEKVRDNHLKQLLTIA 679 Query: 690 NIILIVINVQKIV 702 +I ++ ++ +++ Sbjct: 680 QMINVMGDLNQLI 692 >gi|315303195|ref|ZP_07873853.1| glycyl-tRNA synthetase, beta subunit [Listeria ivanovii FSL F6-596] gi|313628438|gb|EFR96913.1| glycyl-tRNA synthetase, beta subunit [Listeria ivanovii FSL F6-596] Length = 688 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 196/731 (26%), Positives = 337/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + E L + L E + + ++ + TP RL + + + Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVEQLKKRMTDWLHENQITFSEIKTFSTPRRLTVLVSNM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF RS + ++ K + Sbjct: 61 AEEQANRVEEAKGPAKKIALDEEGNWSKAALGFARSQSINPAD--LTFREIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +L + + + +P SM W + +IRP+K ++ + E Sbjct: 119 KEVIGKKTTALLPQ-LQKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMFGTE--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I ++ + N++ GHRF + Y L E V++D R+ AI Sbjct: 170 --VIPFEITGVVTSNMSRGHRFLG-KTATIMQPSDYQNALLEQFVVVDATARKEAIAGQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ ++ ED DLLEE+ LVE+ V G+F++ YL LPEE++ T+K +Q+ F Sbjct: 227 KELAALENWQIKEDTDLLEEVTNLVEYPTVLAGNFEEIYLELPEEILITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +++ L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQDDKLLPHFVTVRNG-NHENLETVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 --------LKMTIDEAVAKL--PNIVFHEKLGTLTEKMKRVQKVALMLADYLNWKEEDKE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTDIYKFDLVTNVVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TL+ F+ +N P+GS DP+ LRR+ G +RII N DIP+ + I Sbjct: 444 QTDLGSLIAIADKLETLVGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPVLELI 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L + IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGAVELPSDDVKKEVQTFLKNRLRVVLQNHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 VD + LN+ S + + R+ I E+ +E+ P E E+ L+ Sbjct: 564 VDRAQILNKHVESEWFRPTIEALTRVVNISKKYEEG-----VEVDPALFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKYDYASLTIVER----LKAFAGLRTTIDDYFDNTLVMSDNLELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|220917749|ref|YP_002493053.1| glycyl-tRNA synthetase, beta subunit [Anaeromyxobacter dehalogenans 2CP-1] gi|254781842|sp|B8JDD8|SYGB_ANAD2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219955603|gb|ACL65987.1| glycyl-tRNA synthetase, beta subunit [Anaeromyxobacter dehalogenans 2CP-1] Length = 701 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 197/729 (27%), Positives = 337/729 (46%), Gaps = 67/729 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A L L L + + + +R TP RL ++ + ++ Sbjct: 1 MADLLFEIGAEEIPAGFVPGALRQLEDDLSKALADARLAHGEVRSVGTPRRLAVWARDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E GP V G A GF RS G++ + ++ KG+ Sbjct: 61 PKQTDARTEAFGPPVAQAYDAEGKPTPAATGFARSQGVEVSA--LVRAQTPKGERVAVTK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R E VL ++ + + + K+MR ++ RP++ ++ +L Sbjct: 119 VEKGRRAEQVLPALLERLVGGLRFRKAMRS-----RFDEATFARPVRWMVALLGG----- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQ-SLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + + + E+ G +TYGHRF AP I ++ + D Y+ L A VL DP RR A+L + Sbjct: 169 RPLKVRHGEVTSGKVTYGHRFLAPKAIALKGTPDDYLAKLRRAHVLADPVERRAALLAEL 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R ++ +D L+E+++ LVE +G F+K L LP E++ ++ +Q+ F Sbjct: 229 ARAGKEAAGKVRDDPALVEQVLYLVEEPTAVVGEFEKSNLELPPEVVISEMRNHQRYFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L N F+ VS + D A G RV+ ARL DA F++ D+ Sbjct: 289 VDGKGRLKNRFVAVSATRVKD-PAVARHGYERVLRARLADARFFFEEDR----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 + L +R+ L F AK+G++ +R RI + +A+ + D + D Sbjct: 337 ---------KRRLHERIEDLGRR--TFQAKLGSELDRAQRIGAVASALARALGKDALVAD 385 Query: 413 R--AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 A L+K DL T +V EFPELQG +G YA L+ DAIE+H KP G E +P Sbjct: 386 LLEASRLAKVDLNTGMVGEFPELQGTMGAHYARLEGLKPEIADAIEDHYKPIGAAEELPR 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + V++AD+L +L+ + EK +G+ DP+ LRR+ +GI+RI++ + L+ +E Sbjct: 446 SDLGALVAVADRLHSLVGIIGVGEKATGAADPFGLRRSAIGILRIVIARGYHLSLAAAVE 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ F R++ +R DL+EA+L +D+++ Sbjct: 506 QTLDALSGVKLAAGRAVVAEQVLDFLRGRVRAAWTER-FDADLVEAVLAAGSDDVVDARR 564 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ L + + ++ KR+ I +EK + + P L AEK L A + Sbjct: 565 RLEALADAKARPDFGSLAVAFKRVANI---QEKAGGSGAAAVDPALLRDAAEKDLLAALE 621 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + Y + + ++ + FFD VLV +D +R NRL L++ + + Sbjct: 622 KVEQEVVARRAARDYPAVLRTVATLEPAVARFFDGVLVMAEDPALRANRLGLMRRVAALF 681 Query: 693 LIVINVQKI 701 + + +KI Sbjct: 682 SDLADFRKI 690 >gi|254556822|ref|YP_003063239.1| glycine-tRNA ligase, beta chain [Lactobacillus plantarum JDM1] gi|308180763|ref|YP_003924891.1| glycine-tRNA ligase, beta chain [Lactobacillus plantarum subsp. plantarum ST-III] gi|254045749|gb|ACT62542.1| glycine-tRNA ligase, beta chain [Lactobacillus plantarum JDM1] gi|308046254|gb|ADN98797.1| glycine-tRNA ligase, beta chain [Lactobacillus plantarum subsp. plantarum ST-III] Length = 694 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 196/733 (26%), Positives = 345/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +LLEI EE+PA + + L ++ LK+ + +++++ + TP RL + + GL Sbjct: 1 MAKTYLLEIGLEEMPAHVVTPSVLQLKERMVKFLKDARLDFEDVKTFSTPRRLTVQVLGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + +E GP G KA GF + G T + KD K Sbjct: 61 ADKQADVKKEVRGPAKKIAQDADGNWTKAAIGFSKGQGASTDD--IVFKDVKGTPYVFVQ 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +VL + I K+ +P M+WST +F +IRP++ I+ +L Sbjct: 119 TFTAGKTAAEVLAAGIKDVITKMNFPTMMKWSTY-----SFKYIRPIRWIVSLL-----D 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ + + ++ G ++ GHRF +++ + Y DL V+ D R+ I Sbjct: 169 DEVVPVQILDVAAGRVSRGHRFLGHD-VEIATAADYEADLASVQVIADAAKRKATIREQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ ++ ++DLLEE+ LVE+ F G FD KYL +P+E++ +++ +Q+ F Sbjct: 228 AALANERDWQIKVNEDLLEEVNNLVEYPTAFAGDFDTKYLTIPDEVLITSMRDHQRFFYV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 E L F+ V N +D + GN +V+ ARLEDA F+ DQ Sbjct: 288 TDAEDNLLPHFVSVRNG-NTDHLENVALGNQKVLTARLEDAAFFYHEDQQ---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 + + + RL V FH KIGT E++ R+ V+ +A + Sbjct: 337 ----------HSIQEYVERLK--KVSFHDKIGTMYEKMQRVMVISDFLADRFGLTETEKN 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G +YAVL+ E+ + AI EH P ++P Sbjct: 385 QLHRAAQIYKFDLVTGMVGEFPELQGVMGDKYAVLKGEDPAVGQAIREHYMPISADGDLP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +K+ +++ADK+D++ +F+A+ PSGS DP+ALRR GI+RI+ E D P+ Q Sbjct: 445 KSKVGAVLAIADKVDSITSFFAVGLTPSGSNDPFALRRQAFGIVRIVREQGWDFPIRQLE 504 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 D + F DR+K + ++R IR+D+++ +++ ++ Sbjct: 505 ADIQKELVAHDATYNLDFEKQTAPVADFLTDRVKQWFNNRKIRYDIVDTVIKGSRQDIRE 564 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + LN + + + + R+ +I A + ++ + P EAE+ LY Sbjct: 565 MFKAADVLNAHQDDPQFKDTIEAFTRLLRITAKAKLAAGDL--TVDPSLFENEAEQHLYD 622 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + +M + L ++ I +F+Q +V D +VRDN L L I Sbjct: 623 AVLELQKQFTPAMSMED---RFKALAALRPLIVDYFEQTMVMSKDEKVRDNHLKQLLTIA 679 Query: 690 NIILIVINVQKIV 702 +I ++ ++ +++ Sbjct: 680 QMINVMGDLNQLI 692 >gi|56476157|ref|YP_157746.1| glycyl-tRNA synthetase beta chain [Aromatoleum aromaticum EbN1] gi|81821186|sp|Q5P766|SYGB_AZOSE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|56312200|emb|CAI06845.1| glycyl-tRNA synthetase beta chain [Aromatoleum aromaticum EbN1] Length = 696 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 204/727 (28%), Positives = 351/727 (48%), Gaps = 64/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 L+E+ +EE+P + + E + + LK ++ ++ R + P RL + + + Sbjct: 5 ATVLVELLTEELPPKALPRLGETFAAKVFEGLKARDLVAEDRGFRCFAAPRRLAVTVPTV 64 Query: 60 SPHSPEKIE-ERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLA 111 +P + E++ P G A+ L++ G+ + ++ K + Sbjct: 65 RAAAPSREVTEKIMPVQVALDAEGRPTPALLKKLQAKGIAPEAVASFERRVDGKAEALFY 124 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 +P ++DVL IV A++ +P PK MRW + ++RP+ + + Sbjct: 125 THLEPGAALDDVLAAIVQEAVKALPIPKLMRWGAGDA-----QFVRPVHKLAML-----H 174 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +++ + ++ G +T GHRF + I++ + + Y L E V+ D RR+ I Sbjct: 175 GARVVPGRVLDLDAGRVTMGHRFMSRGEIELATAEAYEPTLLAEGKVIPDFAERRSNIER 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A G L E DLL+E+ LVE V++G F+ ++L +P+E + LT++ NQK F Sbjct: 235 QLVATAQEQGASLGEYADLLDEVAALVEHPTVYVGEFELEFLAVPQECLILTMRANQKYF 294 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L N F++VSN++ +D + IV GN RVV RL DA F+++D+ Sbjct: 295 PLFDAAGKLLNRFLIVSNMRLAD-PSNIVAGNQRVVRPRLSDARFFFEQDR--------- 344 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 LD R+ RL VV+H K+G+Q ERV R+ L +IA + DVA Sbjct: 345 -----------KHTLDSRLPRL--APVVYHNKLGSQLERVERLERLAGRIADRLHGDVAA 391 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L+KADL T++V EFPELQG +G+ YA+ E DA++ H +PR + +P Sbjct: 392 ASRAARLAKADLVTDMVGEFPELQGIMGRYYALNDGEGEVVADAVQSHYQPRFAGDTLPA 451 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + V+LADKLDTL+ F+ I + P+G KDP+ LRRA LG++RI++E + + L+ Sbjct: 452 GNTACAVALADKLDTLVGFFGIGQLPTGDKDPFGLRRAALGVLRILIETPLPLDLAALVG 511 Query: 529 --------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + L+ F +RL+ L + D+++A+L + + + Sbjct: 512 DAAEGFAPGLLTAADFESQLLDFMFERLRNLLREAGHAVDVVDAVLALHPTRIDLVPAKL 571 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + F + E + KRI IL E + E L +AEK L+ + + Sbjct: 572 DAVRVFRGLPEAEALAAANKRIVNILKKAE----DELPEPDVALLQEQAEKALFHAVVEV 627 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++ Y L + ++ FFD V+V V++ R NRL+LL+ + ++ Sbjct: 628 APLVHSHVANEDYTDALCALAGLRAAVDTFFDDVMVMVEEPLTRRNRLALLRQLAGLMNQ 687 Query: 695 VINVQKI 701 V ++ ++ Sbjct: 688 VADLSRL 694 >gi|238926230|ref|ZP_04657990.1| glycine--tRNA ligase [Selenomonas flueggei ATCC 43531] gi|238885910|gb|EEQ49548.1| glycine--tRNA ligase [Selenomonas flueggei ATCC 43531] Length = 682 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 208/729 (28%), Positives = 329/729 (45%), Gaps = 81/729 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA + EDL+ + +LKE + + +R TP R L + GL+ Sbjct: 4 DLLLEIGTEEIPAHVMPHLLEDLAQLAETMLKEHRLSCEKVRTLGTPRRAALIVTGLAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP V G KA GF R G+ + I++D A + + Sbjct: 64 QEDVNTETRGPSVAIAFDSDGNPTKAGAGFARGQGVDPSA--LIQRDG----YVYASVHE 117 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L +++P ++ +P P SMRW F +IRP++ + + E I Sbjct: 118 SGAATAELLTSLLPDLVRAIPLPNSMRWGDLD-----FRFIRPIRWFVALYGTE-----I 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L + GN + GHR AP + S Y E+A +++DPE RR I Sbjct: 168 VPFALAGVTSGNHSRGHRTLAPADFVITSAADYEAACEKAYIIVDPERRRAMICEQIAET 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G DLLEE++ LVE+ GSF++KYL LP E + ++ +Q+ F + Sbjct: 228 AKACGGTAEITPDLLEEVLYLVEYPTALSGSFEEKYLALPAEAVITPMRDHQRYFPVKAA 287 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + + GN RV+ ARL DA F+ D+ Sbjct: 288 DGSLLPVFITVRNGG-KEHLDIVAHGNERVLRARLADAQFFFDEDRR------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR----VLGKKIAQLIDADVAL- 410 K L + +L VVF +G+ E+ R+ + +++A+ AD L Sbjct: 334 -------KSLAEHREKLKT--VVFQQGLGSMYEKTERLMALTTAIVEEMAEGDAADAVLA 384 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA LSKADL T +V EF ELQG +G+EYA+L E+ + AI+E PR + +P Sbjct: 385 GAQRAAKLSKADLVTGMVTEFTELQGIMGREYAMLDGEDPAVARAIDEQYMPRFAGDELP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S ADK+D ++ ++ P+GS+DP+ALRR LG++ +++E K + LS + Sbjct: 445 QTPLGFALSAADKVDNIVGTFSQGRIPTGSQDPFALRRQALGLVLMLIEQKSTMLLSDLV 504 Query: 530 E----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + F RLK L +R +R+D+ EA+L + D + + Sbjct: 505 DEACDLYDLDVSLCQKMQVYVADFIRLRLKNVLTERGVRYDVQEAVLE-DVDFVADVPVR 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ +S + + S R+ I + P E E L + Sbjct: 564 AAYVERLLASDGADALVQSFVRVGNIAR------GVTGGAVDPALFQAEEEGALLSAYQT 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 E ++ + I FFD V+V D +++NRLSLL+ I + +L Sbjct: 618 AAAARAEG------EDTLPAERALGKAINAFFDAVMVMDKDVRIKENRLSLLKMIDDYLL 671 Query: 694 IVINVQKIV 702 + KIV Sbjct: 672 ETADYSKIV 680 >gi|116514231|ref|YP_813137.1| glycyl-tRNA synthetase subunit beta [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275037|sp|Q04A23|SYGB_LACDB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116093546|gb|ABJ58699.1| glycyl-tRNA synthetase beta chain [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 688 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 210/732 (28%), Positives = 350/732 (47%), Gaps = 79/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 3 KDFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTVLVKELDE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF R G+ I + KG Y V + Sbjct: 63 KQADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGMSADD---IYFEELKGVEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K + +++L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 120 QKAGKEAKEILLG-LDEVIKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R+ I++ + Sbjct: 170 -VVPVEFLDITAGRKTAGHRFLG-DSVVLANADDYVEALRDQYVIVDADERKAMIVSQIN 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 228 DLVNSHNWQIKLDASLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L NCFI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 288 DQEGKLINCFISVRNG-NKDHLENVISGNEKVLVARLDDAVFFYDEDR------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 P+ + R+D V FH KIG+ E+++R+R++G +A+ Sbjct: 335 --------KYPISHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 385 FDRVSGLYKFDLVTQMVGEFAELQGVMGMHYACLAGENENVSVAIKEHYMPTTAEGDLPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q Sbjct: 445 TKVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ED+ L F DR+K +L + ++D+I+A+L + I Sbjct: 505 EIVELLSGKTPAKLPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L + + + S RI IL + + P +E+ LY Sbjct: 565 LAAAKVLQQHHDDEAFKPVVESLTRIANILKKAKFSQASP---VDPSLFEDRSEQDLYDG 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + K + ++ + ++ I+ +FD ++ D V++NRLS L + + Sbjct: 622 VEALA-------NVKDHAELYEAFVALQGVIDRYFDVNMIMAKDEAVKNNRLSQLAAVND 674 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 675 LAKRLGDLSKLV 686 >gi|16803498|ref|NP_464983.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes EGD-e] gi|224501601|ref|ZP_03669908.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL R2-561] gi|25009330|sp|Q8Y754|SYGB_LISMO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|16410887|emb|CAC99536.1| glyS [Listeria monocytogenes EGD-e] Length = 688 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 201/731 (27%), Positives = 338/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++G+ Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEGM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + +D K + Sbjct: 61 AEEQANRVEEAKGPAKKIALDEEGNWSKAALGFAKSQKVDPAD--LTFRDIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + + +P SM W + +IRP+K ++ + Sbjct: 119 KEVIGEKTSTLLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF ++ Y L E V+++ E R+ AI+ Sbjct: 168 EEIIPFEITGVTTSNTSRGHRFLG-KSATIKQPSDYPNALLEQFVVVNAEERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++ G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQAGELLPHFVTVRNG-NHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 --------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----- 524 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N +IP Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWNIPMLEVI 503 Query: 525 --------------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 L + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LNE + + + R+ +I E +E+ P E E+ L+ Sbjct: 564 IDRAQILNEHAEAEWFRPTIEALSRVVKIAKKYEDG-----VEVDPALFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDYAGLTIIER----LKAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|325125921|gb|ADY85251.1| Glycyl-tRNA synthetase beta chain [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 688 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 210/732 (28%), Positives = 351/732 (47%), Gaps = 79/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 3 KDFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTVLVKELDE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF R G+ I + KG Y V + Sbjct: 63 KQADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGMSADD---IYFEELKGVEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K + +++L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 120 QKAGKEAKEILLG-LDEVIKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R++ I++ + Sbjct: 170 -VVPVEFLDITAGRKTAGHRFLG-DSVVLANADDYVEALRDQYVIVDADERKDMIVSQIN 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 228 DLVNSHNWQIKLDASLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L NCFI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 288 DQEGKLINCFISVRNG-NKDHLENVISGNEKVLVARLDDAVFFYDEDR------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 P+ + R+D V FH KIG+ E+++R+R++G +A+ Sbjct: 335 --------KYPISHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 385 FDRVSGLYKFDLVTQMVGEFAELQGVMGMHYACLAGENENVSVAIKEHYMPTTAEGDLPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q Sbjct: 445 TKVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ED+ L F DR+K +L + ++D+I+A+L + I Sbjct: 505 EIVELLSGKTPAKLPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L + + + S RI IL + + P +E+ LY Sbjct: 565 LAAAKVLQQHHDDEAFKPVVESLTRIANILKKAKFSQASP---VDPSLFEDRSEQDLYDG 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + K + ++ + ++ I+ +FD ++ D V++NRLS L + + Sbjct: 622 VEALA-------NVKDHAELYEAFVALQGVIDRYFDVNMIMAKDEAVKNNRLSQLAAVND 674 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 675 LAKRLGDLSKLV 686 >gi|297569675|ref|YP_003691019.1| glycyl-tRNA synthetase, beta subunit [Desulfurivibrio alkaliphilus AHT2] gi|296925590|gb|ADH86400.1| glycyl-tRNA synthetase, beta subunit [Desulfurivibrio alkaliphilus AHT2] Length = 696 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 207/723 (28%), Positives = 340/723 (47%), Gaps = 66/723 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI +EEIPA A + L L L+E + + + TP RL + ++GL+ Sbjct: 9 ELLLEIGAEEIPAGYLMPALKALQAGLAQGLREHELAFGEINTGATPRRLAVSVQGLAAR 68 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++EE +GP G KA GF + G+ + KG+ A + + Sbjct: 69 QPDRVEEAMGPPKKAAFDADGKPTKAALGFASTKGVSVDELQVVA--TPKGEYLQARVEQ 126 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R ++L ++P I +P+PKSMRW + + RPL+ +L + + Sbjct: 127 PGRATAEILNDLLPGLITGLPFPKSMRWGNGKTH-----FARPLRWLLAVYQG-----RS 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L+E+ G+ T+GHRF AP I+ + Y L + VL+DP RR A++ + +R Sbjct: 177 LAFSLEELSAGDHTWGHRFLAPQSIQATTFSTYRDQLRQYQVLVDPAERRQAMVAEINRA 236 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ G ++ D +L E + LVE GSF +++L LP E++ +++ +QK F Sbjct: 237 AAEAGGRILPDPELEETVTNLVEAPFAICGSFAERFLQLPREVLITSMREHQKYFAVVDE 296 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 + L F+ V+N + D A +G+ RV+ ARLEDA F+ DQ Sbjct: 297 QDNLQPRFVAVNNTRVKD-PAVGAEGHQRVLRARLEDAFFFFNEDQQ------------- 342 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV-DRA 414 +PL Q RL+ ++F ++GT ++ +R+ L ++A +++ RA Sbjct: 343 -------RPLSQLAGRLN--GIIFQHQLGTMADKTARLEQLAGRLADEFAPELSAAVRRA 393 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL T +V EFP LQG IG++YA Q E+ +A+ H P +P ++ Sbjct: 394 AQLCKADLLTSMVDEFPSLQGNIGRDYARRQGESEEVAEALYSHYLPLRAGGQLPQDRTG 453 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII------------LENKID 522 + +AD+LDTL + I K +G+ DP+ LRR +G+I ++ +E + Sbjct: 454 ALLGIADRLDTLAGCFGIGLKVTGAADPFGLRRQAVGLIHLLLGHKLKLPLKPWIETALS 513 Query: 523 IPLSQFIEDQN-----LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + Q E L+ F RL L R + + +EA+L + + I+ L Sbjct: 514 LYDCQLQEQPAAARDRLLEFIKGRLANDLTGRGLPAEAVEAVLSVDFQEVNDCQARIEAL 573 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 S S KR+ I+ I PQ L AEK L AV++ Sbjct: 574 VAVSSQPSFTLLAGSFKRVNNIIKDNR------DDRIDPQLLQEPAEKELAAVLARVTAA 627 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + Y Q + + ++ EPI+ FFDQV+V +D +++ NRL+LL I + V + Sbjct: 628 AAPLLRDGAYRQTLEHILTMKEPIDRFFDQVMVMAEDEQLKRNRLALLTAIAALFRRVGD 687 Query: 698 VQK 700 + Sbjct: 688 FSR 690 >gi|319638992|ref|ZP_07993750.1| glycyl-tRNA synthetase beta subunit [Neisseria mucosa C102] gi|317399896|gb|EFV80559.1| glycyl-tRNA synthetase beta subunit [Neisseria mucosa C102] Length = 687 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 212/710 (29%), Positives = 348/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLIDGAAEYTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I + K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAKIEDLTVI--NDGKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ S++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHSLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V R+ AI + A + + Sbjct: 184 GNKTLGHRFLSSGKIAIENADSYAAQMREQGKVEASFAERKAAIQTALNEQAGRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALYAAAQGLQPKISAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|320157808|ref|YP_004190187.1| glycyl-tRNA synthetase subunit beta [Vibrio vulnificus MO6-24/O] gi|319933120|gb|ADV87984.1| glycyl-tRNA synthetase beta chain [Vibrio vulnificus MO6-24/O] Length = 693 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 208/730 (28%), Positives = 344/730 (47%), Gaps = 68/730 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELTHEGVKWYAAPRRLALKVTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + H +KI E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEHQADKIVEKRGPAVSAAFDADGNATKAAQGWARGCGITVDQAERMITD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + D++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTADIVVELAAKALAGLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + + GHRF + S + Y LE V+ D E R+ IL D Sbjct: 171 --LIQGEILGVASDRVIRGHRFMGEREFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+A+G + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAIGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 T + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYTEDKQLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KSKLVDRLPMLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR +++P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDDLPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 532 --------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q +I F R + + D D+I+A+L Sbjct: 505 AKSLFAQQDGTSRLTNDNVEQEVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 QRVKAVSHFRELEAAEALAAANKRVGNILA---KFDGELAAEIDLALLQEDAEKVLAENV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ Sbjct: 622 EVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKTNRLTLLNNLRNL 681 Query: 692 ILIVINVQKI 701 L + ++ + Sbjct: 682 FLQIADISLL 691 >gi|28378607|ref|NP_785499.1| glycine--tRNA ligase, beta chain [Lactobacillus plantarum WCFS1] gi|38258517|sp|Q88VS3|SYGB_LACPL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28271443|emb|CAD64348.1| glycine--tRNA ligase, beta chain [Lactobacillus plantarum WCFS1] Length = 694 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 196/733 (26%), Positives = 345/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +LLEI EE+PA + + L +I LK+ + +++++ + TP RL + + GL Sbjct: 1 MAKTYLLEIGLEEMPAHVVTPSVLQLKERMIKFLKDARLDFEDVKTFSTPRRLTVQVLGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + +E GP G KA GF + G T + KD K Sbjct: 61 ADKQADVKKEVRGPAKKIAQDADGNWTKAAIGFSKGQGASTDD--IVFKDVKGTPYVFVQ 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +VL + I K+ +P M+WST +F +IRP++ I+ +L Sbjct: 119 TFTAGKTAAEVLTGGIKDVITKMNFPTMMKWSTY-----SFKYIRPIRWIVSLL-----D 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ + + ++ G ++ GHRF +++ + Y DL V+ D R+ I Sbjct: 169 DEVVPVQILDVAAGRVSRGHRFLGHD-VEIATAADYEADLASVQVVADAAKRKATIREQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ ++ ++DLLEE+ LVE+ F G FD KYL +P+E++ +++ +Q+ F Sbjct: 228 AALANERDWQIKVNEDLLEEVNNLVEYPTAFAGDFDTKYLTIPDEVLITSMRDHQRFFYV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 E L F+ V N +D + GN +V+ ARLEDA F+ DQ Sbjct: 288 TDAEDNLLPHFVSVRNG-NTDHLENVALGNQKVLTARLEDAAFFYHEDQQ---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 + + + RL V FH KIGT E++ R+ ++ +A + Sbjct: 337 ----------HSIQEYVERLK--KVSFHDKIGTMYEKMQRVMIISDFLADRFGLTETEKN 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G +YAVL+ E+ + AI EH P ++P Sbjct: 385 QLHRAAQIYKFDLVTGMVGEFPELQGVMGDKYAVLKGEDPAVGQAIREHYMPISADGDLP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +K+ +++ADK+D++ +F+A+ PSGS DP+ALRR GI+RI+ E D P+ Q Sbjct: 445 KSKVGAVLAIADKVDSITSFFAVGLTPSGSNDPFALRRQAFGIVRIVREQGWDFPIRQLE 504 Query: 530 EDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 D + F DR+K + ++R IR+D+++ +++ ++ Sbjct: 505 ADIQKELVAHDATYNLDFEKQTAPVADFLTDRVKQWFNNRKIRYDIVDTVIKGSRQDIRE 564 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + LN + + + + R+ +I A + ++ + P EAE+ LY Sbjct: 565 MFKAADVLNAHQDDPQFKDTIEAFTRLLRITAKAKLAADDL--TVDPSLFENEAEQHLYD 622 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + +M + L ++ I +F+Q +V D +VRDN L L I Sbjct: 623 AVLELQKQFTPAMSMED---RFKALAALRPLIVDYFEQTMVMSKDEKVRDNHLKQLLTIA 679 Query: 690 NIILIVINVQKIV 702 +I ++ ++ +++ Sbjct: 680 QMINVMGDLNQLI 692 >gi|197122957|ref|YP_002134908.1| glycyl-tRNA synthetase subunit beta [Anaeromyxobacter sp. K] gi|254781843|sp|B4UG87|SYGB_ANASK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|196172806|gb|ACG73779.1| glycyl-tRNA synthetase, beta subunit [Anaeromyxobacter sp. K] Length = 701 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 199/729 (27%), Positives = 337/729 (46%), Gaps = 67/729 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A L L L + + + +R TP RL ++ + ++ Sbjct: 1 MADLLFEIGAEEIPAGFVPGALRQLEDDLAKALADARLAHGEVRSVGTPRRLAVWARDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E GP V G A GF RS G++ + ++ KG+ Sbjct: 61 PKQTDARTEAFGPPVAQAYDAEGKPTPAATGFARSQGVEVSA--LVRAQTPKGERVAVTK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R E VL ++ + + + K+MR ++ RP++ ++ +L Sbjct: 119 VEKGRRAEQVLPALLERLVGGLRFRKAMRS-----RFDEATFARPVRWMVALLGG----- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQ-SLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + + + E+ G +TYGHRF AP I ++ + D Y+ L A VL DP RR A+L + Sbjct: 169 RPLKVRHGEVTSGKVTYGHRFLAPKAIALKGTPDDYLAKLRRAHVLADPVERRAALLAEL 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R ++ ED L+E+++ LVE +G F+K L LP E++ ++ +Q+ F Sbjct: 229 ARAGKEAAGKVREDPALVEQVLYLVEEPTAVVGEFEKSNLELPPEVVISEMRNHQRYFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L N F+ VS + D A G RV+ ARL DA F++ D+ Sbjct: 289 VDGKGRLKNRFVAVSATRVKD-PAVARHGYERVLRARLADARFFFEEDR----------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 + L +R+ L F AK+G++ +R RI + +A+ + D + D Sbjct: 337 ---------KRKLHERIEDLGRR--TFQAKLGSELDRAQRIGAVASALARALGKDALVAD 385 Query: 413 R--AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 A L+K DL T +V EFPELQG +G YA L+ DAIE+H KP G E +P Sbjct: 386 LLEASRLAKVDLNTGMVGEFPELQGTMGAHYARLEGLKPEIADAIEDHYKPIGAAEELPR 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + V++AD+L +L+ + EK +G+ DP+ LRRA +GI+RI++ + L+ +E Sbjct: 446 SDLGALVAVADRLHSLVGIIGVGEKATGAADPFGLRRAAIGILRIVIARGYHLSLAAAVE 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ F R++ +R DL+EA+L +D+++ Sbjct: 506 QTLDALSGVKLAAGRALVAEQVLDFLRGRVRAAWTER-FDADLVEAVLAAGSDDVVDARR 564 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ L + + ++ KR+ I +EK + + P L AEK L A + Sbjct: 565 RLEALADAKARPDFGSLAVAFKRVANI---QEKAGGSGAAAVDPALLRDAAEKDLLAALE 621 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + Y + + ++ + FFD VLV +D +R NRL L++ + + Sbjct: 622 KVEQEVVARRAARDYPAVLRTVATLEPAVARFFDGVLVMAEDPALRANRLGLMRRVAALF 681 Query: 693 LIVINVQKI 701 + + +KI Sbjct: 682 SDLADFRKI 690 >gi|172037905|ref|YP_001804406.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. ATCC 51142] gi|171699359|gb|ACB52340.1| glycyl-tRNA synthetase beta chain [Cyanothece sp. ATCC 51142] Length = 711 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 196/738 (26%), Positives = 340/738 (46%), Gaps = 70/738 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ +EE+PA +A I+ L+E + N+ Y TP RL + + GL+ Sbjct: 3 FLLEVGTEELPADFIDEAIAQWKQIIPNSLEENFLTPDNLAVYGTPRRLAILISGLAEQQ 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP G KA +GF R + + +KGD + Sbjct: 63 KDRDEVIKGPPAKAAFKNGKPTKAAEGFARKQEVDIKELDI--RPTEKGDFVFVEKKIKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R +++L+ ++P I + + MRW + RP++ ++ + + +I++ Sbjct: 121 RQTKEILQELIPHWINSLEGRRFMRWGNGE-----LRFSRPIRWLVALCDEQILPIEIVN 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 D I ++ GHR P P+ + Y+ L A V +DP+ R+ I D +A Sbjct: 176 GD-STIKSDRLSRGHRILHPDPVSISQASDYVETLRSAYVEVDPKQRQQIIEKDIETIAK 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + +DLL E+I L+E+ G FD ++L LP E+I + +Q+ F + + Sbjct: 235 DLKGKADLPEDLLTEVINLIEYPTAVAGKFDPEFLNLPTEVIITVMVKHQRYFAVKKSDN 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI ++N + I QGN RV+ ARL DA F+ D + Sbjct: 295 ELLPNFITIANGDP-NKKDIIAQGNERVIRARLADAQFFYTSDCDE-------------- 339 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDRA 414 PLD + L+ +V F ++GT ++V RI + +++A+ ++ + ++ Sbjct: 340 ------PLDSYLPELE--NVTFQKELGTMRDKVDRIMEMAQQMAEQLEITEKEQEEIEST 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L KADL T++V EFPELQG +G++YA++ E+ I EH PRG + +P Sbjct: 392 ALLCKADLVTQMVYEFPELQGVMGQKYALVSGESEQVAQGIFEHYLPRGANDIMPKTLTG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V +AD+LDTLI+ + + P+GS DP+ALRRA II + + ++ I LSQ Sbjct: 452 QVVGIADRLDTLISIFGLGMIPTGSGDPFALRRAANAIISVTWDAQLPINLSQLLIQGCE 511 Query: 529 ----------IEDQNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLLT 569 + L FF R++ L D +I +DL+ A+L + NLL Sbjct: 512 AFMADHVDKQSPLEALQTFFIQRIQTLLQDEFNIDYDLVNAVLGEADAQYTDRALQNLLD 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK--NREISLEISPQYLLLEAEKRL 627 + D + L S+ +K + R ++ A + + S + + +E+ Sbjct: 572 VKDRAEFLQAIRSNGMLDKIYETINRSTRLAAKGDLDYTVLDPSQVVETKLFEKSSEQEF 631 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREVRDNRLSL 684 Y + + ++ + Y + + L I + FFD VLV ++++VR+NRL+L Sbjct: 632 YNGLMALLSKTIQAQSERNYQLLTEGLLDIVPKVSEFFDGENSVLVMDENQKVRENRLNL 691 Query: 685 LQYIKNIILIVINVQKIV 702 L ++N ++ + IV Sbjct: 692 LGVLRNHGRVLADFGAIV 709 >gi|312869157|ref|ZP_07729331.1| glycine--tRNA ligase, beta subunit [Lactobacillus oris PB013-T2-3] gi|311095403|gb|EFQ53673.1| glycine--tRNA ligase, beta subunit [Lactobacillus oris PB013-T2-3] Length = 691 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 204/733 (27%), Positives = 358/733 (48%), Gaps = 75/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + +LLE+ EE+PA + + + L + L+EE + + ++++ TP RL L ++GL Sbjct: 1 MANSYLLEVGVEEMPAHVVTPSIKQLHQRVADYLQEERISFDEIQEFATPRRLALLIRGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ E GP G KA GF R G ++ K + Sbjct: 61 ADKQPDVDETVKGPAKKIAQDSDGNWTKAAIGFTRGQGATVDDIEF--REVKGEEYVFVE 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +VL +P I + +P M+W + +IRP++ ++ +L Sbjct: 119 KHIAGKPVAEVLTG-LPNVITAMNFPTLMKWG-----YNNLQFIRPIRWLVSLL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ + ++ G T GHRF I++ + + Y +LE+ V++DP R+ I + Sbjct: 168 DQVVPFSILDVAAGRTTRGHRFLGHD-IELATAEDYEAELEKEFVIVDPLRRKKVISDQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + + +D DLLEE+ LVEW F GSFDKKYL LP+E++ ++K NQ+ F Sbjct: 227 DAIVEEHDWVIDKDPDLLEEVTNLVEWPTAFAGSFDKKYLVLPDEVLITSMKDNQRFFYL 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G L FI V N + I++GN RV+ RLEDA F++ DQ Sbjct: 287 RDHQGKLLPNFIAVRNG-NKEYLENIIKGNERVLVPRLEDAKFFYEEDQKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + RL V FH KI + +++ R+ V+ + + + ++ A++A Sbjct: 337 -----------TIDQYVDRLK--KVSFHDKISSMYDKMQRVAVIAQLLGKRLNLSAAELA 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA + K DL T++V EF ELQG +G+ YA L E AI EH P ++P Sbjct: 384 DLDRAAHIYKFDLTTQMVGEFAELQGVMGEIYAKLFGEKDDVAAAIREHYMPISAEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL---- 525 K+ +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + + L Sbjct: 444 ATKLGAILAIADKLDSILSFFAVDMIPSGSNDPYALRRQAFGIVRIINDRGWHLSLLGIQ 503 Query: 526 ----------------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + FF DRLK + R +RHD+I+A+ END++ T Sbjct: 504 PVLIKAFADSDVAIDFDLTKNAPAVRTFFLDRLKQFFSGRRLRHDIIDAVTDTENDDIET 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + ++E A + + + R+ +I +K +++++ ++ P +EK+LY Sbjct: 564 VFEAAAAIDEHKEDADFKDAVEALTRVLRI---SKKGHQDLAAQVDPSLFENPSEKKLYT 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +++ + + + L + I +FD+ ++ + VR+NRL+ L I Sbjct: 621 AVNEVAAGAANRTVAENFAE----LRQLAPVITEYFDENMIMDKNEAVRNNRLAQLAIIA 676 Query: 690 NIILIVINVQKIV 702 + ++ N+ ++ Sbjct: 677 RLARVMGNLNDLI 689 >gi|330993190|ref|ZP_08317127.1| Glycyl-tRNA synthetase beta subunit [Gluconacetobacter sp. SXCC-1] gi|329759741|gb|EGG76248.1| Glycyl-tRNA synthetase beta subunit [Gluconacetobacter sp. SXCC-1] Length = 686 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 240/719 (33%), Positives = 367/719 (51%), Gaps = 53/719 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ +AA DL +L L + ++ Y P R+ L L + Sbjct: 1 MPELLIELFSEEIPARMQARAASDLERLLCEAL--APLKPRDATAYAGPRRIALALT-VD 57 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P + GPR A +KA+ GF+R G++ + + G L P Sbjct: 58 ATVPGGTVDERGPRESAPEKALAGFMRKHGVERDALVL-----ENGFWVLHRT-IPPVDA 111 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 + I+P +++ PWPKSMRW SAF+W+RPL+ I+C+L + + + + Sbjct: 112 AKQIADILPGLLRRFPWPKSMRWGVG----SAFTWVRPLRRIVCLLDGKVVDFTLAEGED 167 Query: 181 --KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 + N+T GHRF AP V ++ L V D RR I RLA Sbjct: 168 NGHGLKSANLTEGHRFTAPGAFAVTGRQDWLDGLRARQVEPDAAARRTTIAEGVARLARE 227 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 GL +V D L++E+ GL EW F+G D ++ LP E+++++++ NQ+ F R +G Sbjct: 228 EGLNVVADPGLIDEVAGLTEWPVPFLGQIDDAFMTLPPEVMQVSMRVNQRYFALRNADGS 287 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 A F V+N+ DGGA + GN RV+ AR DA HFW D+ Sbjct: 288 AAPRFAFVANLLPDDGGALTIAGNERVLRARFADARHFWDLDR----------------- 330 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 ++ L R+ LD +VFHA +G+QG RV R+ L +A + ADVA +RA +L Sbjct: 331 ---ARTLAGRVPGLDR--IVFHASLGSQGARVQRLVRLAGVLAGMTGADVAQAERAALLC 385 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T +V EFPELQG +G YA E + DAI H PRGP ++VPT +S+ V+ Sbjct: 386 KADLTTGMVGEFPELQGIMGAYYARHDGEPDAVADAIGAHYMPRGPQDDVPTAPVSVAVA 445 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF---------- 528 LADK+D L+ F+A+ EKP GS DPYALRRA LG+IRII EN + + L++ Sbjct: 446 LADKIDMLVAFFAVGEKPGGSGDPYALRRAALGVIRIIRENGLRLDLAKVLWDAAQGLPE 505 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLNEFFS 582 + L F +RL++ L RHD++ A+ D +++ ++ + + + Sbjct: 506 ALRLAPDLDVLPEFIAERLRVQLRGEGARHDILAAVSVGNTDTDIVRLLARATAIADMLA 565 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + G L + KR IL IE++K+ +P EK L + ++++ Sbjct: 566 TDDGRNMLAATKRAANILRIEDRKDGPHEGTPNPALYTQPEEKALADALEKTTPEVEQAT 625 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +RY + S+ ++ FF++V VN D VR NRL LL ++ + +++ + +I Sbjct: 626 AQERYADAMRDVASLRPVLDRFFEKVTVNDPDPAVRANRLRLLSELRRMTVLIADFSQI 684 >gi|241759537|ref|ZP_04757640.1| glycyl-tRNA synthetase, beta subunit [Neisseria flavescens SK114] gi|241320094|gb|EER56455.1| glycyl-tRNA synthetase, beta subunit [Neisseria flavescens SK114] Length = 687 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 209/710 (29%), Positives = 346/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ + Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLIDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I + K DVY + + + ++L Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAKIEDLTII--NDGKQDVYAYEYVQTGKPLGELLV 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + ++ I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGSD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V R+ AI + A + + Sbjct: 184 GNKTLGHRFLSSGEIAIENADSYAAQMREQGKVEASFAERKAAIQTALNEQAGRLKATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + A+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHTAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLNGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRR+ LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRSALGILRMLMQYGLDVNELIQTAFNSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALYAAAQGLQPKISAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|67922573|ref|ZP_00516080.1| Glycyl-tRNA synthetase, beta subunit [Crocosphaera watsonii WH 8501] gi|67855582|gb|EAM50834.1| Glycyl-tRNA synthetase, beta subunit [Crocosphaera watsonii WH 8501] Length = 711 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 195/738 (26%), Positives = 334/738 (45%), Gaps = 70/738 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ +EE+PA +A I+ L+E + +N+ Y TP RL + + GL Sbjct: 3 FLLEVGTEELPADFIDEAIAQWQQIIPKSLEENFLTPENLEVYGTPRRLAILISGLPEQQ 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP V G KA +GF R + + KGD + Sbjct: 63 KDRDEVIKGPPVKAAFKDGKPTKAAEGFARKQEVTLDDLEI--RPTDKGDFVFIEKKIKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R +++L+ +P I + + MRW + RP++ ++ + E +I++ Sbjct: 121 RQTKEILQESIPNWINSLEGRRFMRWGNGE-----LRFSRPIRWLVALCDQEILPLEIVN 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 D I ++ GHR P + + Y V +DP+ R+ I D ++ Sbjct: 176 GD-STITSDRLSRGHRILHPDTVSIAQAAEYRETFRAVYVEVDPKQRQQIIEKDIETISQ 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + +DLL E+I LVE+ G FD ++L LP E+I + +Q+ F + Sbjct: 235 QLTGTADIPEDLLTEVINLVEYPTAVAGKFDPEFLNLPTEVIITVMVKHQRYFAVKKSAQ 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI ++N + I QGN RV+ ARL DA F+ D + Sbjct: 295 ELLPNFITIANGDP-NKKDIIAQGNERVIRARLADAQFFYTSDCDE-------------- 339 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDRA 414 PLD + +L+ +V F ++GT +V RI + ++I++ ++ + ++ Sbjct: 340 ------PLDSYLPQLE--NVTFQKELGTMRYKVDRIMDMAQQISEQLEVREQEQEEIEST 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L KADL T++V EFPELQG +G++YA+ E+ I EH PRG + +P + Sbjct: 392 ALLCKADLVTQMVYEFPELQGIMGQKYALASGESEEVAQGIFEHYLPRGAKDIMPKSLTG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V +AD+LDTLI+ + + P+GS DP+ALRRA II + E ++ I L+Q Sbjct: 452 QVVGIADRLDTLISIFGLGMIPTGSGDPFALRRAANAIITVTWEAELPINLAQLLLQGCQ 511 Query: 529 ----------IEDQNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLLT 569 + L FF R++ L D +I +DL+ A+L + NLL Sbjct: 512 AFMADHGDKESPLEALQTFFIQRIQNILQDDFNIDYDLVNAVLGEADAEYMERALQNLLD 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRL 627 + D + L E S+ ++ + R ++ A + + E+ + + +E+ L Sbjct: 572 VKDRSEFLQEIRSNGMLDRIYETINRSTRLAAKGDLEYTELDPSKVVRTELFEKSSEQEL 631 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVRDNRLSL 684 + + + ++ D Y + + L I + FF D VLV D++ ++ NRL+L Sbjct: 632 FNGLMALVSKTTQAQDEGDYQLLIEGLLDIIPKVSNFFDGEDSVLVMDDNQNIKQNRLNL 691 Query: 685 LQYIKNIILIVINVQKIV 702 L ++N ++ + IV Sbjct: 692 LGVLRNHGRVLADFGAIV 709 >gi|294676756|ref|YP_003577371.1| glycyl-tRNA synthetase subunit beta [Rhodobacter capsulatus SB 1003] gi|294475576|gb|ADE84964.1| glycyl-tRNA synthetase, beta subunit [Rhodobacter capsulatus SB 1003] Length = 754 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 252/778 (32%), Positives = 376/778 (48%), Gaps = 103/778 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ A + L ++ L E G+ Y + + + TP RL L L GLS Sbjct: 1 MPELLIELFSEEIPARMQAMARDTLRKMVTDGLVEAGLTYGHAQAFSTPRRLVLVLDGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP A + A+ GFLRSTGL D K+D KKG V+ AV+ KP R Sbjct: 61 TESPTLREERKGPATTAPEAALQGFLRSTGLTL--DQLEKRDDKKGQVWFAVIEKPGRAA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW W+RPL SILC+L ++D ++DLD+ Sbjct: 119 PEIVAEVLEKTIRSFPWPKSMRWGNG-----TLKWVRPLHSILCLL-SDDTGASVVDLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP V Y L+ A V+LD R I +DA +LA A G Sbjct: 173 DCIKAGATTAGHRFMAPDRFTVTGFADYAAKLKAAKVVLDSAEREAMIWHDATQLAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED+ LL E+ GLVE+ MG+ + +L LP E+++ +++ +QK F R+ + Sbjct: 233 LELVEDRGLLTEVAGLVEFPVALMGAIAEDFLHLPPEVLQTSMREHQKFFSVRSPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I++GN +V++ARL DA FW+ D + A Sbjct: 293 EGFVTVANRETADHGATILKGNLKVLSARLSDARFFWEHDLRVVKTEGLEGMGA------ 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+G+Q R+ RI L ++IA L+ AD ++A ++ K+ Sbjct: 347 ------------GLANVTFHNKLGSQKARIDRIAALAREIAPLVKADPDQAEKAALVVKS 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA Q A + H P GP + VP+ +++ V+LA Sbjct: 395 DLRSAMVGEFPELQGLMGSYYARAQGLPEEIATACKGHYSPLGPSDAVPSEPVTVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-------------- 526 DK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + + L Sbjct: 455 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLGNGLRMGLERVISKIFTQRANIA 514 Query: 527 ---QFIEDQNLIL---------------------------------FFHDRLKLYLHDRD 550 ++ + L FF Sbjct: 515 TLGDWVRETELEQEETKSALYEALINEDLASYAEGHEAKLAELASSFFGGVKPTPSKHHG 574 Query: 551 IRHDLIEAILRPENDNLLTIVD----LIKHLNEFFSSAKGEKFLLSAKR----------- 595 +L +D L + ++ + + L KR Sbjct: 575 QARQSSSDLLSFFHDRLKVFLKDEGIRHDVIDAVLAMPGNDDLTLVVKRAEALSAFLKTE 634 Query: 596 -----------IFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 IL E K+ E S ++ ++AE+ L+A + + +M Sbjct: 635 DGTNLIQGFKRANNILTQAEAKDGVEYSFGADVKFAEVDAERALFAALDAAEAALAPAMQ 694 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + PI+ FF V +N ++ VR NRL+LL I+ I V ++ K+ Sbjct: 695 SEDFATAMAEMAKLRAPIDAFFTAVQINAENPIVRRNRLNLLSRIRQICQSVADLTKL 752 >gi|307728479|ref|YP_003905703.1| glycyl-tRNA synthetase subunit beta [Burkholderia sp. CCGE1003] gi|307583014|gb|ADN56412.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1003] Length = 700 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 202/714 (28%), Positives = 338/714 (47%), Gaps = 60/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + +K + +PE+ + E+ Sbjct: 19 PPKALARLGDAFAEGIAERLAARDLIEGELSFERYATPRRLAVTVKNVRAVAPERHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P + G + L + G S +++ K + + P + + Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFSVSDLERAQDGKAEAFFLRYAAPGATLAEG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP + + E+++ + I Sbjct: 139 LQAALDETLTKLPIPKVMTYQRPDG--SNVQFVRPAHRLTAL-----HGERVVPVSALGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 + T GHRF + +++Q D Y+ L V+ + R+ I A G + Sbjct: 192 DADDTTLGHRFLSEGFVQIQHADAYVDTLMHKGRVVPNFADRKETIRTHLLAHA--DGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW + F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVAYSCRFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ + G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETATPGD-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+ +RV R+ L IA LI ADVAL RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSALQRVERLEGLAGAIAALIGADVALAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +P V+LADK Sbjct: 407 ITDMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPATATGTVVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+TL+ W I +P+G KDP+ALRR LG++RI++E ++ + + Sbjct: 467 LETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLAVDFVELLRTAHAQFAALPNV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 Q + F DRL+ L +R I+A+L E L IV + + EF + + Sbjct: 527 TDSTQAIYEFSMDRLRGLLRERGHAPGEIDAVLALEPTRLDDIVARLVAVREFAALPEAG 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL + +S + P + AEK L+A + +Q + + Y Sbjct: 587 SLAAANKRISNILKKSDSAT--VSGGVQPALFVEAAEKALHAQLEQVAPRVQSQLAARDY 644 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 645 TGALTALAALREPVDTFFNDVMVNAEDPALRANRLALLGALHQQLNCVADISRL 698 >gi|325206837|gb|ADZ02290.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M04-240196] Length = 687 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 211/710 (29%), Positives = 350/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLIAGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+++ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDKVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTAD-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|116872889|ref|YP_849670.1| glycyl-tRNA synthetase beta chain [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458471|sp|A0AIQ9|SYGB_LISW6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116741767|emb|CAK20891.1| glycyl-tRNA synthetase beta chain [Listeria welshimeri serovar 6b str. SLCC5334] Length = 688 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 198/731 (27%), Positives = 343/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + ++ ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVAQLEKRVSDWLNENQITFEKIKTYSTPRRLTVLVEAM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF RS ++ ++ K + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFARSQKVEPAD--LTFREIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + + +P SM W + +IRP+K ++ + Sbjct: 119 KEVIGEKTTALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF ++ Y L E V+++ E R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLG-KTATIKQPSDYPNALLEQFVVVNAEERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L S ++ ED+DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELESMENWQIKEDEDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +++ L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSKDEELLPHFVTVRNG-NHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIAIAIREHYLPSSAEGALP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TL+ F+ +N P+GS DP+ LRR+ G +RII N DIP+ + + Sbjct: 444 QTDLGSIIAIADKLETLVGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPVLELL 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L + IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGAVELPSDDVKKEVQTFLKNRLRVVLQNHHIRHDIIDAVIGGDPNTIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 VD + LN+ S + + R+ I E ++E+ P + E+ L+ Sbjct: 564 VDRAQILNKHVESDWFRPTVEALTRVMNISKK-----HEGNVEVDPSLFENKYEQALFDE 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 I R ++ I+ +FD LV ++ E+++NRL+LL + + Sbjct: 619 IEKLKYDYANLTIVDR----LRAFAALRTTIDDYFDNTLVMSENIELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|254455912|ref|ZP_05069341.1| glycyl-tRNA synthetase, beta subunit [Candidatus Pelagibacter sp. HTCC7211] gi|207082914|gb|EDZ60340.1| glycyl-tRNA synthetase, beta subunit [Candidatus Pelagibacter sp. HTCC7211] Length = 688 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 208/721 (28%), Positives = 349/721 (48%), Gaps = 56/721 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F LE++SEEIP+ +Q EDL + + ++ + TP+RL + +GL Sbjct: 1 MSEFFLELFSEEIPSSLQKNLREDLLGNFNKFFNDRLISFKKGSSFSTPNRLIILFEGLQ 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 K EE GP + A + A++GF+RS + KK + Y + + Sbjct: 61 KQVVLKSEEIKGPNINAPEIALEGFIRSNNISKND--LYKKTIDNKEFYFFKTKLKRLNT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++L+ +P ++K+ W KSM+W + W RPLKSIL + +K + D Sbjct: 119 YELLEEFIPKTLEKIQWKKSMKWGNYN-----LKWGRPLKSILAVF-----DKKKLIFDF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + N T+ + + + Y ++ ++++ E R+N I + + + Sbjct: 169 HHLSSSNTTFIDKEFEENKKIFTNFKDYNNFFKKLNIIINQELRKNLIEKKFNEILTKKN 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 +++ ++ LL+E++ L + V + FD+K+L +P+E++ +T++ +QK F T +G + Sbjct: 229 IKIEKNTRLLDEVVDLTDQPNVLLCEFDRKFLNIPKEILIITMQNHQKYFPTFDNKGNIT 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F++V+N Q D I GN RVV ARL DA FW +D+ Sbjct: 289 NEFLVVTNKQ--DKKGFIKLGNERVVEARLSDAEFFWFKDK------------------- 327 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 S L +++++L ++ + +GT ++V R+R LG ++ + V+ + + K Sbjct: 328 -SHNLVKKVSKLKSMN--YFKGLGTYFDKVQRMRKLGGMLSDELLISKEKVELSASVCKV 384 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G +A Q AI E P G +P SI +SLA Sbjct: 385 DLVSELVGEFPELQGIMGGYFAEAQGFEKDVSLAISEQYLPIGSDSKIPKKPYSIALSLA 444 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DK+DTL+ F+ IN+KP+ SKDPYALRR LGIIRII +NK D + I Sbjct: 445 DKIDTLVGFFGINQKPTSSKDPYALRRLALGIIRIIAQNKKDFKIRDLISYSSSLYVDQG 504 Query: 532 ---------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFF 581 ++L F +RLK ++ + IRHD+I+A + N D+++ I K LN+ Sbjct: 505 FEFQNKFLQKDLSEFLMERLKFFMKEEKIRHDIIQASVNSFNLDHIVVIFGKAKCLNKII 564 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 G + S KR I+ E K + E+S P + EK L+ I++ + Sbjct: 565 RKPNGIDLISSYKRASNIIESEIKNQKIELSNSTDPGIFKTDFEKNLFKKINELSKYFNS 624 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + + + L + + FFD V+VN +D ++ NRL L+Q + +N Sbjct: 625 INKDENFEKSLTYLADSKKVVFDFFDNVIVNEEDTTIKKNRLELIQMLCKTFDNYVNFSL 684 Query: 701 I 701 I Sbjct: 685 I 685 >gi|37678204|ref|NP_932813.1| glycyl-tRNA synthetase subunit beta [Vibrio vulnificus YJ016] gi|61216582|sp|Q7MQI8|SYGB_VIBVY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|37196943|dbj|BAC92784.1| glycyl-tRNA synthetase, beta subunit [Vibrio vulnificus YJ016] Length = 693 Score = 548 bits (1413), Expect = e-153, Method: Composition-based stats. Identities = 208/730 (28%), Positives = 345/730 (47%), Gaps = 68/730 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELTHEGVKWYAAPRRLALKVTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + H +KI E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEHQADKIVEKRGPAVSAAFDAEGNATKAAQGWARGCGITVDQAERMITD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + D++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTADIVVELAAKALAGLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + + GHRF ++S + Y LE V+ D E R+ IL D Sbjct: 171 --LIQGEILGVASDRVIRGHRFMGEREFTIESAEQYPAILEERGKVMADYEMRKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+A+G + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAIGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 T + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYTEDKQLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KSKLIDRLPMLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR +++P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVALALNEQYMPRFAGDDLPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 532 --------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q +I F R + + D D+I+A+L Sbjct: 505 AKSLFAQQDGTSRLTNDNVEQEVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 QRVKAVSHFRELEAAEALAAANKRVGNILA---KFDGELAAEIDLALLQEDAEKVLAENV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ Sbjct: 622 EVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKTNRLTLLNNLRNL 681 Query: 692 ILIVINVQKI 701 L + ++ + Sbjct: 682 FLQIADISLL 691 >gi|27364425|ref|NP_759953.1| glycyl-tRNA synthetase subunit beta [Vibrio vulnificus CMCP6] gi|32130159|sp|Q8DDJ7|SYGB_VIBVU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|27360544|gb|AAO09480.1| Glycyl-tRNA synthetase beta chain [Vibrio vulnificus CMCP6] Length = 693 Score = 548 bits (1412), Expect = e-153, Method: Composition-based stats. Identities = 207/730 (28%), Positives = 345/730 (47%), Gaps = 68/730 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELTHEGVKWYAAPRRLALKVTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + H +KI E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEHQADKIVEKRGPAVSAAFDADGNATKAAQGWARGCGITVDQAERMITD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + D++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTADIVVELAAKALAGLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +I ++ + + GHRF ++S + Y LE V+ D E R+ IL D Sbjct: 171 --LIQGEILGVASDRVIRGHRFMGEREFTIESAEQYPSILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+A+G + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAIGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 T + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYTEDKQLLPNFIFVSNIESKE-PRYVIEGNEKVVRPRLADAEFFFNTDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 ----------KSKLIDRLPMLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR +++P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDDLPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 532 --------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q +I F R + + D D+I+A+L Sbjct: 505 AKSLFAQQDGTSRLTNDNVEQEVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 QRVKAVSHFRELEAAEALAAANKRVGNILA---KFDGELAADIDLALLREDAEKVLAENV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ Sbjct: 622 EVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKTNRLTLLNNLRNL 681 Query: 692 ILIVINVQKI 701 L + ++ + Sbjct: 682 FLQIADISLL 691 >gi|254522505|ref|ZP_05134560.1| glycyl-tRNA synthetase, beta subunit [Stenotrophomonas sp. SKA14] gi|219720096|gb|EED38621.1| glycyl-tRNA synthetase, beta subunit [Stenotrophomonas sp. SKA14] Length = 691 Score = 548 bits (1412), Expect = e-153, Method: Composition-based stats. Identities = 199/727 (27%), Positives = 333/727 (45%), Gaps = 64/727 (8%) Query: 1 MPDF---LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLY 55 M L+E+ +EE+P + A+ ++ L++ G + + R TP RL + Sbjct: 1 MSQLSPLLIELGTEELPVKALPGLAQAFFDGVVDGLRKRGVALDLGDARPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G+ PE+ E LGP G KA+ GF G++ + K KG+ Sbjct: 61 LPGVGLEQPEQHSEVLGPYLNIALDAEGQPTKALQGFAAKAGIEWTALE--KTTDNKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P +L I+ AI +P PK MRW A+ + RP ++ + Sbjct: 119 FVHRAVTPGASTASLLPEILREAIAAMPIPKPMRWGDH-----AWGFARPAHWLVLL--- 170 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + +++ +L + G ++ GHRFH + + Y+ L A VL+DP RR I Sbjct: 171 --HGDNVVEAELFGLQAGRVSRGHRFHHDQAVSLAQPQDYVEALRAAFVLVDPSERRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A+ G +D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VAEVEAAAAKAGGSARITEDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI++ D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDSGTLTEKFIGIANIESKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L L V + AK+G+ ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLASMGEGLKT--VTYQAKLGSVADKVARVAALAEVIAPQVGADA 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A RA L+K DL + +V EFPELQG G+ YAV E++ AI+E +PR +++ Sbjct: 386 AQAKRAAELAKNDLQSRMVNEFPELQGIAGRHYAVAGGESVDVALAIDEAYQPRFGGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A+++DTL +A KP+G+KDP+ALRR LG+ R I+E+ ++ L Sbjct: 446 ALSALGKVLAIAERVDTLAGGFAAGLKPTGNKDPFALRRNALGLARTIIESGFELDLRAL 505 Query: 529 --------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + L F DRLK Y D+ + A+ + +L + Sbjct: 506 LASANAGLAARNVQADVGELYDFILDRLKGYYADKGVPATHFNAVAELKPASLYDFDRRL 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + F + + E + KRI IL E +I +I L +AE+ L ++ Sbjct: 566 DAIGTFAALPEAEALAAANKRIRNILRKAE---GDIPAQIDTALLQEDAERALAEAVTAA 622 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 S+ HK Y + L + ++ FFD V+VN +D +R NRL+LL + + Sbjct: 623 IDDTGASLQHKDYVAVLARLARLRPQVDAFFDGVMVNAEDPALRGNRLALLTMLGERLGK 682 Query: 695 VINVQKI 701 V ++ + Sbjct: 683 VAAIEHL 689 >gi|295695443|ref|YP_003588681.1| glycyl-tRNA synthetase, beta subunit [Bacillus tusciae DSM 2912] gi|295411045|gb|ADG05537.1| glycyl-tRNA synthetase, beta subunit [Bacillus tusciae DSM 2912] Length = 695 Score = 548 bits (1412), Expect = e-153, Method: Composition-based stats. Identities = 200/728 (27%), Positives = 354/728 (48%), Gaps = 68/728 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI EE+PAR +A + L + + L+ +G+ + ++ Y TP RL LY L+ Sbjct: 5 FLLEIGVEELPARFVPEALDQLRVKMSEWLEAQGLAHGALQVYGTPRRLTLYAADLAERQ 64 Query: 64 PEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ + GP G KA +GF RS G+ +++ +G A+ R+ Sbjct: 65 EDREFQVRGPSLKAAKGPDGRWTKAAEGFARSQGVAVDD--LVERGTPQGVYVYALKREA 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 ++L +P + + +PK+MRW T + RP++ ++ + E+I+ Sbjct: 123 GLRTPELLAGYIPELVLGLSFPKTMRWGTGD-----VRFARPIRWLVALY-----GEEIV 172 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 ++ + G + GHR P +++ + Y+ L+ A V++D R+ I++ R A Sbjct: 173 PAEVAGVKTGRTSRGHRTLHPGQVEIPRAEAYVDVLDAAFVMVDVARRKEVIVDQVRRAA 232 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + +G + V D++LLEE++ LVEW F G+FD+ +L +P E+I LT+K NQ+ F + Sbjct: 233 AEIGGQAVIDEELLEEVVHLVEWPTAFAGAFDRDFLQVPPEVIMLTMKENQRYFPVVDGD 292 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L F+ V N + GN +V+ ARL DA F+ D+ P + Sbjct: 293 GGLIPGFVGVRNGG-DHRLDVVRAGNEKVLRARLADAKFFYDEDRKIAPIRA-------- 343 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDR 413 M RL +VF GT ++V R+R +G ++A + +V ++ Sbjct: 344 ------------MERLR--HIVFQEGAGTMYDKVERVRRVGLELADRLGLAPREVETMEA 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A + K DL T +V EFPEL+G +G+ YA+ E +AI EH +PR P + +P + Sbjct: 390 AGRILKFDLATHMVYEFPELEGVMGRYYALEAGEGPEAAEAILEHHRPRFPGDELPGSPA 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 +++ADK DTL + +P+GS+DPY LRR LG+++I+ +I I L + + Sbjct: 450 GTVLAVADKADTLCASFYAGIRPTGSEDPYGLRRNALGLLQILRYLEIPITLGEIFDLAE 509 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +L F RL+ +L + RHDL++AIL ++ L ++ ++ Sbjct: 510 AALRASGFQDGGTWRADLDSFVTTRLRTWLLEEGRRHDLVDAILHRADEPLAVLIGRVRF 569 Query: 577 LNEFFSS--AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + +AKR+ + KK ++ E P +AE+ L+ Sbjct: 570 YEGLADEGHPGLYETAEAAKRVHNLA----KKGEGLAGEPDPGRFQDDAERALHEASRLA 625 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 +Q + + D + + + FFD+V+V V+D E+R+NRL LL+ + ++ + Sbjct: 626 RRELQAARAAGDEKRALDAVGHLNRAVHPFFDRVMVLVEDEEIRENRLRLLRDVADVYNL 685 Query: 695 VINVQKIV 702 +++ +++V Sbjct: 686 LLDWRQVV 693 >gi|260655940|ref|ZP_05861409.1| glycyl-tRNA synthetase, beta subunit [Jonquetella anthropi E3_33 E1] gi|260629556|gb|EEX47750.1| glycyl-tRNA synthetase, beta subunit [Jonquetella anthropi E3_33 E1] Length = 686 Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 212/722 (29%), Positives = 340/722 (47%), Gaps = 61/722 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D + EI +EEIPAR A L L++E + + + Y TP RL L+L+ + Sbjct: 1 MAKDLVFEIGTEEIPARFMTDALAALKAAAADELEKERIRVRRVDTYGTPRRLVLFLRDV 60 Query: 60 SPHSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP +A +GF +S G+ I+K D A Sbjct: 61 PDRQDDLCEEFKGPAWKNCFDVNGYPTRAAEGFAKSRGVDVSD--LIRKPSGNVDYAFAQ 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +E+VL ++ K+ +PK+M WS + RP++ ILC+L Sbjct: 119 KSASGLPVEEVLPALLTRVAGKLVFPKNMFWSDP-----TVRFARPIRWILCLL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+I ++L + G +T GHRF ++V Y+ L + V++D E RR +L Sbjct: 169 DKVIPVELSGVKSGRVTRGHRFMGCSAVEVPDAASYLSVLYDQSVIVDQEKRREKMLAAI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + +G + + L+EE + LVE+ F G FD KYL LPEE++ ++K NQK F Sbjct: 229 ASIERELGGTVELEDGLVEENLYLVEYPVPFAGKFDPKYLLLPEEVLITSMKVNQKYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R+ G L F+ VSN + + I +GN RV+ ARLEDA FW+ D Sbjct: 289 RSSSGKLLAMFVGVSNNKPA-TMDLIREGNERVLRARLEDAAFFWQED------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--IDADVAL 410 L KPL R+ L VV+ K+G+ ++ + +A + A+ L Sbjct: 336 --------LKKPLSARLDGLKQ--VVYQEKLGSVYDKTQWMTGYAVWLADQLNLGAEKTL 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA LSK DL T++V EFPELQG +G+ YA E+ A+EE PR + VPT Sbjct: 386 VQRAAQLSKTDLITQMVGEFPELQGVMGRAYAKENGEDPRVALALEEQYLPRSAGDKVPT 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + V LA+++ +++ + + +PSGS+DPY LRRA + I+ KID+ + + ++ Sbjct: 446 DIVGALVGLAERIFSMVGAYKLGFRPSGSQDPYGLRRAVRCVNEILWALKIDLDMGKALD 505 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++L + R L ++ HDL+ E N + L+K + Sbjct: 506 EACRTLSLDEEAQKSLREYVASRTFGQLKEQGFPHDLVALAADAEGSNPWQELCLLKAYS 565 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 + A +A R+ ILA + + Q ++AEK L+ + I Sbjct: 566 SVSAQAWFAGLREAAGRVKNILAKAPSR----PETVDAQLFKIDAEKGLWNAVETLREPI 621 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + R++ + + L + + FFDQV+V DD VRDNRL+LL + + +V ++ Sbjct: 622 AQDVAECRWNDLMERLAGLAPAVAAFFDQVMVMDDDAAVRDNRLALLLHCDRLFSLVGDL 681 Query: 699 QK 700 + Sbjct: 682 SR 683 >gi|269792671|ref|YP_003317575.1| glycyl-tRNA synthetase, beta subunit [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100306|gb|ACZ19293.1| glycyl-tRNA synthetase, beta subunit [Thermanaerovibrio acidaminovorans DSM 6589] Length = 691 Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 196/720 (27%), Positives = 336/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA E++ + L+ + Y + Y TP RL LY++ L+ Sbjct: 6 DLLFEIGTEEIPASFLAFGLEEVKRLAKEELEAASLRYGAIESYGTPRRLALYVRDLAER 65 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G K GF +S G++ D +D K AV+R+ Sbjct: 66 QDDVEEEIRGPMWSQAFDPNGHPTKVAVGFAKSRGVEV--DALEMRDVKGVPYAFAVVRR 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L I+ + ++ +PK+M WS + + RP++ ++ + +++ Sbjct: 124 EGQETSSLLPDILSRILHRLVFPKNMYWSDP-----SVRFARPIRWLVALW-----GDQV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + + G ++ GHRF ++++S Y+ L V+ P RR +L+ L Sbjct: 174 IPVTVGNVTSGRVSRGHRFLGKRAVEIRSAGEYLDALYGEFVIAHPGKRREKMLSAIASL 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + +G ++ D DL+EE LVE+ F G+FD +L +P+E++ T+K +Q+ F R Sbjct: 234 ENEMGGKVELDPDLVEENCNLVEYPVPFFGTFDASFLEMPQEVLCTTMKKHQRYFPVRDS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G LA CF+ VSN QA+ + +GN RV+ ARL DA FW D+ Sbjct: 294 KGNLAPCFVGVSNNQAT-LMQNVREGNERVLRARLSDASFFWDEDR-------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVALVDR 413 K L R+ L +VV+ K+G+ ++V +R + + + + + L+DR Sbjct: 339 ------KKGLASRVEALK--NVVYQEKLGSVYDKVQSVRSVALWLGEQLGMVDKLNLLDR 390 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSKADL T +V EFPELQG +G+EYA E A+ E PR +++P+ I Sbjct: 391 AALLSKADLVTSMVYEFPELQGVMGREYARCSGEAPEVALALYEQYLPRFAGDSLPSQPI 450 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI---- 529 + +A++ T++ + +P+ S+DP+ LRRA I I+ +D+ + Q Sbjct: 451 GAVLGVAERAYTIVAIHHVGLEPTSSQDPHGLRRAARCINEILWGLDLDVAVDQLFLKVA 510 Query: 530 --------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + FF RL + L +R H L+ + L + L++ L Sbjct: 511 EVLGADRPVVEKAMEFFRQRLLVQLRERGFSHGLVSLGVDCIWSRPLQALKLLEVLEGLK 570 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + +A R+ IL K+ I+ E+ E L + + E+ Sbjct: 571 GEDWFGSLVTAAIRVRNILLKA--KDERIASEMDGA---EGVELELLNELRAVRPCLDEA 625 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + +HQ+ LLH + P+ FFD V+V D EVR RL +L+ + + ++ + + Sbjct: 626 LGEFDWHQVARLLHRLEGPVRAFFDGVMVMDQDPEVRARRLGILKEAQGLFDLIGDFSNL 685 >gi|225077471|ref|ZP_03720670.1| hypothetical protein NEIFLAOT_02534 [Neisseria flavescens NRL30031/H210] gi|224951220|gb|EEG32429.1| hypothetical protein NEIFLAOT_02534 [Neisseria flavescens NRL30031/H210] Length = 687 Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 212/710 (29%), Positives = 348/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + ++ I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGSD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I + + D Y + E V R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEITITNADSYAEQMREQGKVEASFAERKAAIQTALEGQAHRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|107023637|ref|YP_621964.1| glycyl-tRNA synthetase subunit beta [Burkholderia cenocepacia AU 1054] gi|105893826|gb|ABF76991.1| glycyl-tRNA synthetase beta chain [Burkholderia cenocepacia AU 1054] Length = 699 Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 201/714 (28%), Positives = 334/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + + L +I +Y TP RL + ++ + +P+K E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELVFERYATPRRLAVVVQNVRAVAPDKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNASIADLERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + A+ K+P PK M + S ++RP+ + + ++++ + + Sbjct: 139 LQAALDEALAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGV 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ +L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPQL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADTAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLHTAHARFAGVPGV 526 Query: 531 ---DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEIDAVLSLNPTRIDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRVPVDTFFNDVMVNAGDPALRANRLALLSALHQQMNCVADISKL 697 >gi|227544908|ref|ZP_03974957.1| glycine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300910065|ref|ZP_07127525.1| glycyl-tRNA synthetase beta subunit [Lactobacillus reuteri SD2112] gi|227185120|gb|EEI65191.1| glycine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300892713|gb|EFK86073.1| glycyl-tRNA synthetase beta subunit [Lactobacillus reuteri SD2112] Length = 691 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 196/733 (26%), Positives = 358/733 (48%), Gaps = 75/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + +LLE+ EE+PA + + + L + LKE+ + + +++++ TP R+ L + GL Sbjct: 1 MANTYLLEVGVEEMPAHVVTPSIKQLHERVEKYLKEQRITFDDIQEFATPRRMALLIHGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S P+ E GP G KA GF R G K+ K + Sbjct: 61 SDKQPDIDESVKGPAKKIAQDADGNWTKAAIGFTRGQGASVEDIEF--KEVKGVEYVFVE 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +VL+ +P I + +P M+W + +IRP++ ++ +L Sbjct: 119 KHIAGKTVAEVLQG-LPTVITSMNFPTLMKWG-----YNNLQFIRPIRWLVSLL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ ++ ++ G T GHRF P+++ D Y L V+ D R+N I + Sbjct: 168 DEVVPFNILDVEAGRETQGHRFLGH-PVEIAKADDYEETLNNDFVIADQTKRKNLIKDQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++ + ++ D+DLLEE+ LVEW F GSFD+KYL LP+ ++ ++K NQ+ F Sbjct: 227 TKIINENNWQVDWDEDLLEEVNNLVEWPTAFAGSFDEKYLALPDPVLITSMKDNQRFFCV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R ++G L + FI V N +D +++GN RV+ RLEDA F++ DQ Sbjct: 287 RDKDGNLLSHFISVRNG-NTDYLDNVIKGNERVLVPRLEDAQFFYQEDQKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +D+ + RL V FH KI + +++ R+ V+ + + ++ ++A Sbjct: 337 -----------TIDEYVERLK--KVSFHDKISSMYDKMQRVAVIANVLGKQLNLSDEELA 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA + K DL T++V EF ELQG +G+ YA L E AI EH P +P Sbjct: 384 DLDRAAHIYKFDLTTQMVGEFAELQGIMGEIYAKLFGEKDDVATAIREHYMPISAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 KI +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + ++PL Sbjct: 444 QTKIGAVLAIADKLDSIMSFFAVDMIPSGSNDPYALRRQAFGIVRIIADRGWNLPLLSIQ 503 Query: 530 --------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + FF DR+K H + +RHD+I+A +++ Sbjct: 504 SEIAPAFENAEINVSFDLNKNSDEVRSFFLDRIKQLFHGQKVRHDIIDAATDTRQNDIAN 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I++ I+ +++ ++ + + R+ +I +++ E+ + P +E +++ Sbjct: 564 ILEAIQTIDDHKDDDNFKEDIEALTRVLRIAKKDKRPVSEL--VVDPNLFENPSEAKMHT 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +S+ Q+++ L ++ I +FD+ ++ + ++R+NRL+ L + Sbjct: 622 AVSELIKENQQTVSEN-----FAALRTLTPIISEYFDENMIMDKNEDIRNNRLAQLSILA 676 Query: 690 NIILIVINVQKIV 702 N ++ N+ ++ Sbjct: 677 NQASLIGNLDNLI 689 >gi|289523166|ref|ZP_06440020.1| glycyl-tRNA synthetase, beta subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503709|gb|EFD24873.1| glycyl-tRNA synthetase, beta subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 691 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 202/722 (27%), Positives = 351/722 (48%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI +EEIPAR A E++ I ++E + Y M + TP R+ L L+GL+ Sbjct: 5 NLLFEIGTEEIPARFMPWALEEIKKIADDEFQKERLSYDVMESFGTPRRIALLLRGLAEK 64 Query: 63 SPEKIEERLGPRVG-------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY-LAVLR 114 + IEE GP +A GF +S G+ S +K+ G Y AV+R Sbjct: 65 QEDLIEEIKGPLWSQAFDDYSNPTRAAIGFAKSRGVPVES---LKRQEINGQFYAFAVIR 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R +L +++ ++++ +PK+M W F ++RP++ +LC+ ++ Sbjct: 122 QEGRETLSILPSLLERLVRRLVFPKNMYWMDP-----GFKFVRPIRWLLCLY-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L + NI+ GHRF +++ S D Y+ L + V++D R+ IL+ Sbjct: 172 VVPVKLGNLVGKNISRGHRFLGSSNVEINSADEYLEKLYDNYVIVDHAKRKEKILSGIRA 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + ++ + DL++E + LVE+ FMG+F++++L LPEE++ + +QK F + Sbjct: 232 IERENHVKAMLPPDLVDENVFLVEYPFPFMGTFEERFLSLPEEVLITVMIHHQKYFPLKD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI VSN A+D + +GN RV+ ARL DA+ F+ D Sbjct: 292 DSGKLQPAFIGVSNNMATDM-DVVKEGNERVLRARLSDAVFFYNED-------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALV 411 L KPL R+ L ++V+ +GT ++V R++ + + + + LV Sbjct: 337 ------LKKPLAARVNELQ--NIVYQESLGTLLDKVVRVKDIALHLCKELGYGKEVADLV 388 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA LSKADL T +V EFPEL+G IG+EYA E+ A+ E P + +P + Sbjct: 389 ERAAFLSKADLVTNMVYEFPELRGVIGREYAKANGEHERVARALHEQYLPAFVGDVLPKD 448 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 I + +AD++D +++ ++ P+GS+DPYALRR + +I+ ++D+ L +E Sbjct: 449 VIGAIIGVADRIDNIVSCGKMDLLPTGSQDPYALRRTARCLNELIIGLEMDVDLGSLVEK 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 Q ++ F RL + L ++ HD+ L L + L + L Sbjct: 509 AAVILKCEENIGQKVMDFLKQRLYVQLREKGFSHDVATLSLAVIGQRPLQALKLAEKLES 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + ++ +A R+ ILA + ++ Y E EK LY IS ++ Sbjct: 569 VRNEEWFQRLATAAVRVRNILAKASALDTG-KGKVDESYFQSEVEKELYHKISVIAPVLR 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +++ + +I + L + I FF++VLV DD +R NRL+LL + ++ ++ Sbjct: 628 DALKSFDWDRIINSLLELEPIISRFFEEVLVMADDPLLRMNRLALLAECDALFRLIGDLG 687 Query: 700 KI 701 I Sbjct: 688 TI 689 >gi|167568847|ref|ZP_02361721.1| glycyl-tRNA synthetase subunit beta [Burkholderia oklahomensis C6786] Length = 699 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 204/714 (28%), Positives = 334/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + + L +I +Y TP RL + ++ + +PEK E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAACDLIEGELAFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K D + P + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGRPNLSIADLERAHDGKADAFFVNYAAPGASLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + E+++ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HDERVVPVSAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L E V+ R+ AI A G E Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHASAYADTLREKGRVIAHFAGRKEAIRTQLDAHAE--GDE 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+Q R+ R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSQLARIERLETLAGEIAPAIGADATIAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACTEHYQPRFSGDTLPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L L IV + + EF + E Sbjct: 527 AESTDAIYAFFIDRLRGLLRERGYSAGEVDAVLSLNPTRLDDIVARLDAVREFARLDESE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P + AEK L+ +++ +Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSESGANGAVQPALFVEAAEKALHEQLAEVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKL 697 >gi|220932081|ref|YP_002508989.1| glycyl-tRNA synthetase, beta subunit [Halothermothrix orenii H 168] gi|254781853|sp|B8CXH5|SYGB_HALOH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219993391|gb|ACL69994.1| glycyl-tRNA synthetase, beta subunit [Halothermothrix orenii H 168] Length = 686 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 206/727 (28%), Positives = 352/727 (48%), Gaps = 71/727 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EE+PA + K DL + I L+++ + ++ + + TP RL L++K L Sbjct: 1 MARDLLFEIGTEEMPAGLIGKIRSDLKDLAINTLEDKRLDFKECKVFSTPRRLVLFVKEL 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EK E GP G +A GF R+ G++ K D Sbjct: 61 AEKQEEKREVVKGPARSIAFEDDGTPTRAAKGFSRAQGVEVDDLII------KDDYVYVE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +LK I+P I K+P P+SMRW+ + F +IRP++ +L + Sbjct: 115 KIEQGQDTAGLLKDILPGLINKLPLPRSMRWADYN-----FKFIRPIRWLLALF-----G 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II + + G T GHRF ++V+ DHY +E+ +++D RR IL Sbjct: 165 EEIISFSMAGVQSGAYTRGHRFLVKDRLEVKDPDHYFDVMEKGYIIVDHNKRRELILKQI 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + +G +++ + DLL E++ LVE+ F G FD+ YL LP++++ ++ +Q+ F Sbjct: 225 REIEKEIG-KVMVEDDLLTEVVDLVEYPTAFYGKFDRSYLELPDDVLITSMAEHQRYFPV 283 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L+ F+ V + D + GN V+ ARL DA F++ D Sbjct: 284 IDEDGSLSPYFVGVRDG-IEDYIEEVRYGNEMVLRARLADARFFFEED------------ 330 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L +++R L+ ++VF +G+ ++V R++ L +I + ++ + + Sbjct: 331 --------LKVSIEERQKELE--EIVFQEDLGSMMDKVKRLKQLVIQIGKSLNLKESQLQ 380 Query: 413 ---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA LSK DL TE+V EF +LQG +G+EYA++ E+ AI E PR + +P Sbjct: 381 SLIRAAELSKNDLVTEMVNEFTKLQGVMGREYALINGEDEEVATAIYEQYLPRYSGDRLP 440 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +S+ADK+D + + +++ PSGS+DP+ALRR GI+ II++ ++ + LS + Sbjct: 441 QTLYGRILSIADKIDNITSHFSLGMIPSGSQDPFALRRQANGIVNIIIDAQLPLKLSSLL 500 Query: 530 E-------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 F RL+ L +R IR+D+I +++R +D+ I+ + Sbjct: 501 NWSIEVLEPGDKDFVNEEKSFLLQRLETILDERGIRYDIINSVVRVGDDDPNNILSRAEA 560 Query: 577 LNEFFSS--AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + + R + + E N +I+P+Y EK LY + Sbjct: 561 VMSLRKENPDLFVDLIQGLVRARNLASKGEGNN-----DINPEYFECREEKELYDIYRKI 615 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 IQ K Y L + EP++ F D V+V V+D +++NRL+LLQ I N++ Sbjct: 616 KDEIQRQFKKKNYLSGLKKLVDVKEPVDNFLDNVVVMVEDERIKNNRLALLQEISNLVSG 675 Query: 695 VINVQKI 701 V+N+ +I Sbjct: 676 VMNISEI 682 >gi|313123891|ref|YP_004034150.1| glycyl-tRNA synthetase beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280454|gb|ADQ61173.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 688 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 210/732 (28%), Positives = 351/732 (47%), Gaps = 79/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 3 KDFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTILVKELDE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF R G+ I + KG Y V + Sbjct: 63 KQADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGMSADD---IYFEELKGVEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K + +++L + ++ + +P MRW + F ++RP+ ++ + +E Sbjct: 120 QKAGKEAKEILLG-LDEVVKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R++ I++ + Sbjct: 170 -VVPVEFLDITAGRKTAGHRFLG-DSVVLANADDYVEALRDQYVIVDADERKDMIVSQIN 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 228 DLINSHNWQIKLDASLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L NCFI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 288 DQEGKLINCFISVRNG-NKDHLENVISGNEKVLVARLDDAVFFYDEDR------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 PL + R+D V FH KIG+ E+++R+R++G +A+ Sbjct: 335 --------KYPLSHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 385 FDRVSGLYKFDLVTQMVGEFAELQGVMGMHYARLAGENENVSVAIKEHYMPTTAEGDLPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q Sbjct: 445 TKVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ED+ L F DR+K +L + ++D+I+A+L + I Sbjct: 505 EIVELLSGKTPAKLPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L + + + S RI IL + + P +E+ LY Sbjct: 565 LAAAKVLQQHHDDKAFKPVVESLTRIANILKKAKFSQASP---VDPSLFEDRSEQDLYNG 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + K + ++ + ++ I+ +FD ++ D V++NRLS L + + Sbjct: 622 VEALA-------NVKDHAELYEAFVALQGVIDRYFDVNMIMAKDEAVKNNRLSQLVAVND 674 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 675 LAKRLGDLSKLV 686 >gi|296161021|ref|ZP_06843832.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. Ch1-1] gi|295888720|gb|EFG68527.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. Ch1-1] Length = 699 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 208/714 (29%), Positives = 341/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L ++ + +Y TP RL + +K + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLVEGELSFERYATPRRLAVTIKNVRAVAPEKHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P + G + L + G S +++ K + + P + + Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFSVNDLERAQDGKAEAFFLRYAAPGATLAEG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L++ + + K+P PK M + + ++RP + + E+I+ + I Sbjct: 139 LQSALDETLAKLPIPKVMTYQRPDG--TNVQFVRPAHRLTAL-----HGEQIVPVSALGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 + T GHRF + +++Q D Y L + V+ + R+ I LA A G + Sbjct: 192 DADDTTLGHRFLSEGFVQIQHADSYAETLLHKGRVVANFSDRKETIRTHL--LAQANGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYACRFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ S G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETSTPGD-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 K L R+ L +VV+H K+G+ +RV R+ L IA+LI ADVAL RA L+KADL Sbjct: 349 KTLADRVPLL--ANVVYHNKLGSALQRVERVEALAGAIAELIGADVALAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT V+LADK Sbjct: 407 ITDMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPTTTTGTVVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+TL+ W I +P+G KDP+ALRR LG++RI++E ++ + + Sbjct: 467 LETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLPVDFVELLRTAYAQFAAVPNV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 Q + F DRL+ L +R I+A+L L IV + + EF S A+ Sbjct: 527 VDSTQAIYEFSMDRLRGLLRERGYAPGEIDAVLALNPTRLDDIVARLDAVREFASLAEAA 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + L+ AEK L+A + +Q + + Y Sbjct: 587 SLAAANKRISNILK---KSEGAATGGVQVALLVEAAEKALHAQLEQVAPRVQSQLAARDY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 644 TGALTALAALREPVDTFFNDVMVNAEDPALRANRLALLGALHQQMNCVADISRL 697 >gi|104774141|ref|YP_619121.1| glycyl-tRNA synthetase subunit beta [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423222|emb|CAI98050.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 697 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 210/732 (28%), Positives = 351/732 (47%), Gaps = 79/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL EI EE+PA + K+ + L LKE G+ ++ ++ Y TP RL + +K L Sbjct: 12 KDFLFEIGVEEMPAHVVSKSVKQLVDRTGKFLKENGLGFKEIKTYSTPRRLTVLVKELDE 71 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF R G+ I + KG Y V + Sbjct: 72 KQADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGMSADD---IYFEELKGVEYAYVHV 128 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K + +++L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 129 QKAGKEAKEILLG-LDEVIKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE---- 178 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R++ I++ + Sbjct: 179 -VVPVEFLDITAGRKTAGHRFLG-DSVVLANADDYVEALRDQYVIVDADERKDMIVSQIN 236 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 237 DLVNSHNWQIKLDASLLEEVNKLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVY 296 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L NCFI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 297 DQEGKLINCFISVRNG-NKDHLENVISGNEKVLVARLDDAVFFYDEDR------------ 343 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 P+ + R+D V FH KIG+ E+++R+R++G +A+ Sbjct: 344 --------KYPISHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGYYLAKRFGLSAEEVAD 393 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 394 FDRVSGLYKFDLVTQMVGEFAELQGVMGMHYACLAGENENVSVAIKEHYMPTTAEGDLPK 453 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q Sbjct: 454 TKVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVP 513 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ED+ L F DR+K +L + ++D+I+A+L + I Sbjct: 514 EIVELLSGKTPAKMPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQI 573 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L + + + S RI IL + + + P +E+ LY Sbjct: 574 LAAAKVLQQHHDDEAFKPVVESLTRIANILKKAKFSQ---ASPVDPSLFEDRSEQDLYDG 630 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + K + ++ + ++ I+ +FD ++ D V++NRLS L + + Sbjct: 631 VEALA-------NVKDHAELYEAFVALQGVIDRYFDVNMIMAKDEAVKNNRLSQLAAVND 683 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 684 LAKRLGDLSKLV 695 >gi|325129468|gb|EGC52298.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis OX99.30304] Length = 687 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 209/710 (29%), Positives = 348/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 N T G RF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 SNQTLGPRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTAD-PSHIIQGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|42519243|ref|NP_965173.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii NCC 533] gi|81832210|sp|Q74IZ2|SYGB_LACJO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|41583531|gb|AAS09139.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii NCC 533] Length = 690 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 203/732 (27%), Positives = 347/732 (47%), Gaps = 77/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSKSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF+R G+ T I + KG Y V + Sbjct: 63 KQEDIDEVKKGPAKKIAQDKDGNWTKAAQGFVRGQGMTTDD---IYFEELKGTEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K + D+L + ++ + +P MRW + F ++RP+ ++ +L +E Sbjct: 120 QKEGKKASDILMGM-SDIVKAMTFPTKMRWGSYD-----FEFVRPIHWMVSLLGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + L ++ G T GHRF + + + D Y L+ V+ + + R+ ILN Sbjct: 170 -VVPVKLLDVVAGRKTQGHRFLG-DSVVLANADDYEEALKSQYVIANADERKGMILNQIQ 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 228 ELVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N FI V N S+ ++ GN +V+ ARL+DA F+ D+ Sbjct: 288 DENGKLINHFISVRNG-NSEYLDNVIAGNEKVLVARLDDAQFFYDEDK------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVAL 410 PL + +L +V FH KIG+ E ++R++++G + + + ++ Sbjct: 335 --------KYPLAHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNVSDTEMKD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DR + K DL T +V EF ELQG +G YA L EN + AI+E P ++P+ Sbjct: 385 FDRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLIGENENVSVAIKESYMPTSAEGDLPS 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ Sbjct: 445 TTVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPIKDVLP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F DR+K L +D+I+A+L + + I Sbjct: 505 ELIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L A + + S RI IL + +N + +I +E+ LYA Sbjct: 565 LAAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRN---ANDIDESLFQDVSEEELYAG 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ + S+ + + I +F+ ++ D +V++NRL+ L + N Sbjct: 622 VNALEENTDLSIAD-----LYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKVNN 676 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 677 LADRMGDLSKLV 688 >gi|186475174|ref|YP_001856644.1| glycyl-tRNA synthetase subunit beta [Burkholderia phymatum STM815] gi|184191633|gb|ACC69598.1| glycyl-tRNA synthetase, beta subunit [Burkholderia phymatum STM815] Length = 699 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 208/714 (29%), Positives = 344/714 (48%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I ++ Y TP RL + LK + +PEK + E+ Sbjct: 19 PPKALARLGDAFAESIAQRLAARDLIEGELQFERYATPRRLAVTLKNVRNVAPEKHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G S +++ + K + + P + + Sbjct: 79 VLPVSVALDANGQPTPPLAKKLAALGFPDFSVNDLERANDGKAEAFFLRYAAPGATLAEG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--SNVQFVRPVHRLTVL-----HDKEIVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLE 242 + T GHRF + +++Q DHY L + V+ + R+ AI LA A G + Sbjct: 192 DADDTTLGHRFLSEGFVQIQHADHYAETLVHKGKVVPNFADRKEAIRTHL--LAQANGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYACEFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 +PL R+ +L +VV+H K+G+ +RV R+ L IA +I ADVAL R LSKADL Sbjct: 349 RPLADRVPQL--ANVVYHNKLGSALQRVERVEALAGAIAAMIGADVALAKRGAHLSKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +P+ V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPSTATGTVVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--------- 533 L+TL+ W I +P+G KDP+ALRR LG++RI++E ++ I L + + N Sbjct: 467 LETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLPIDLVELLRAANAQFTNVPNV 526 Query: 534 ------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + F DRL+ L +R ++A+L IV ++ + EF + A+ Sbjct: 527 TDSTQAIYEFCIDRLRGQLRERGYSAGEVDAVLALNPTRFDDIVARLEAVREFAALAEAA 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL E + + + L+ AEK L+A + +Q + Y Sbjct: 587 SLAAANKRISNILKKSEAAS---ANGVQITLLIEAAEKALHAQLEQVAPRVQSQLAEGEY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 644 TGALSALAALREPVDTFFNDVMVNAEDPALRANRLALLGALHQQMNCVADISRL 697 >gi|332709830|ref|ZP_08429787.1| glycyl-tRNA synthetase beta chain [Lyngbya majuscula 3L] gi|332351428|gb|EGJ31011.1| glycyl-tRNA synthetase beta chain [Lyngbya majuscula 3L] Length = 729 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 194/725 (26%), Positives = 324/725 (44%), Gaps = 78/725 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + L E + + + Y TP RL + +KGL Sbjct: 10 MSTFLLEVGTEELPADFVDSAIAQWQSRIPQTLDEYFLTPEGIEIYGTPRRLAVIIKGLP 69 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G KA GF R G++ D +D KG+ + Sbjct: 70 QKQPDREEEVKGPPAKAAFKDGQPTKAAIGFARKQGVEV--DNLFLRDTAKGEFVFVQKQ 127 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L ++P I + + MRW+ + RP++ ++ +L + Sbjct: 128 ISGRPATEILTELIPQWIFGLEGRRFMRWANGD-----LKFPRPIRWLVTLLDDVVLPVE 182 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +D + + I I+ GHR +P P+++ Y L A V ++PE RR I + Sbjct: 183 -LDNNAEIIKSDRISSGHRILSPKPVEIPQATDYQSYLRNAYVEVNPEARRETIKSQVES 241 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G +L EE+ LVEW +G F ++L LP+E++ + ++Q+ F Sbjct: 242 AAKQLGGYTPLYPELWEEVTNLVEWPTAVVGKFSSEFLNLPQEVVTTEMVSHQRYFPVFK 301 Query: 295 RE--GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 E L FI + N + I GN RV+ ARL D F+K D ++ Sbjct: 302 TEAATELIPYFITIGNGDPA-KSEIIATGNERVIRARLADGQFFYKTDIDS--------- 351 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-------- 404 PL+ + +L+ V F +G+ ++V RI + +I + Sbjct: 352 -----------PLESYLPQLE--KVTFQKDLGSVRQKVGRIEKIASQITDQLRQHSPNLI 398 Query: 405 -DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + + RA +L KADL T++V EFPELQG +G++YAV E+ AI EH PRG Sbjct: 399 SPEAITQIQRAALLCKADLVTQMVYEFPELQGVMGQKYAVTSGESEQVATAIFEHYLPRG 458 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 + +P V LAD+LDTL++ + + P+GS DP+ALRRA GII I + + I Sbjct: 459 AGDALPQTLTGQVVGLADRLDTLVSIFGLGMLPTGSSDPFALRRAANGIINITWDANLPI 518 Query: 524 PLSQFIED----------------QNLILFFHDRLKLYLHDRDI-RHDLIEAILRPEN-- 564 L Q ++D ++L FF R++ L + + +DL+ A+L ++ Sbjct: 519 NLQQLLQDIAADFVAAYPDKNSPIESLQEFFLQRIRTLLQEENKIDYDLVNAVLGEDDPE 578 Query: 565 ------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLEISP 616 ++L + D L + +K + R ++ + +E+ + ++P Sbjct: 579 YQNRALIDVLDVRDRALFLQSIRDNGTLDKIYETVNRSARLAKQGDLDTKELQPTTVVTP 638 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVD 673 +Y E+ Y + + I+ S + + Y ++ + L I + FFD VLV Sbjct: 639 EYFQKSCEQAFYDALVELVPKIKASQEERDYQKLVEALEQIAPTVSTFFDGDQSVLVMDP 698 Query: 674 DREVR 678 D +R Sbjct: 699 DPNIR 703 >gi|332703856|ref|ZP_08423944.1| Glycyl-tRNA synthetase beta subunit [Desulfovibrio africanus str. Walvis Bay] gi|332554005|gb|EGJ51049.1| Glycyl-tRNA synthetase beta subunit [Desulfovibrio africanus str. Walvis Bay] Length = 696 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 196/704 (27%), Positives = 314/704 (44%), Gaps = 63/704 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP F+ EI +EE+PAR + +L+ L L E V + Y TP RL + ++ Sbjct: 1 MPQFVFEIGTEEMPARFVPALSSELAASLFSRLAEAKVDCGEIHTYGTPRRLVAMVADMA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 ++EE GP G KA GF S G+ S ++ KG Sbjct: 61 ESQRSEVEEVTGPPARIAFDAEGKLTKAGLGFAGSQGVPPESLYTVE--TPKGAYLATKK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 D+L + A+ + +PK M W + F++ RP++ I+ +L +E Sbjct: 119 ATGGARSIDILPALCQAAVSALNFPKKMHWGSGD-----FTFGRPIRWIVAMLGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDA 232 II L + N+T+GHR P + + Y + E V+LDP R + I Sbjct: 170 -IIRFSLAGVESSNLTWGHRVMGAGPFAIARAEDYQLVIREQGKVVLDPTRRLDIIRKLG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A A G +V + LLEE++ LVE + SFDK YL LP E++ +++++QK F Sbjct: 229 NASAEAEGGSVVWKQSLLEEVVNLVEHPIPVLASFDKAYLELPREVLLTSMESHQKSFGV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + ++G L F+ V N++ D + +G RV+ ARLEDA FWK D Sbjct: 289 QGKDGKLLPFFLTVINLEPKDE-DLVRKGWERVLKARLEDARFFWKGD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 LS+ D +LD V F +G+ G++ R+ L +AQ I ++ L Sbjct: 336 --------LSRDFDYWCRKLD--SVTFLGPLGSMGDKSRRLERLCGYLAQQISPELLLDL 385 Query: 413 RAI-VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 A +L+K DL T++V EF LQG +G YA + + + AI E P GP P + Sbjct: 386 SAAGLLAKCDLVTDMVGEFDTLQGIMGGIYARKKGKGETVAQAIAEQYLPTGPDSPTPQS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +++ADK DTL + ++ P+G+ DPYALRR LGI RI++++ + + L+ + Sbjct: 446 LAGALLAMADKADTLAGTFGLDMVPTGAADPYALRRQALGICRIVIDHGLRLSLTDLLRT 505 Query: 532 ------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + L+ FF R+K Y + ++EA L D++ Sbjct: 506 AHGVYGDVQWKLAPDESLRKLLDFFGQRIKAYFTAKGHETLVVEACLGAGIDDIWAFSRR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAI-EEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ L+EF E+ +L+ KR I+ + + + L E E+ L I Sbjct: 566 LEALSEFSRGEGFEQAVLTFKRAANIIRKQGSEAGVALDGAYEKRLLESEHERELAQAIE 625 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 Y + LL + ++ FFD V+V +D Sbjct: 626 AVSPRFDALWAQDDYASLMSLLAELRPYVDRFFDNVMVMAEDPA 669 >gi|329667247|gb|AEB93195.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii DPC 6026] Length = 690 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 202/732 (27%), Positives = 346/732 (47%), Gaps = 77/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSKSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF+R G+ T I + KG Y V + Sbjct: 63 KQEDIDEVKKGPAKKIAQDKDGNWTKAAQGFVRGQGMTTDD---IYFEELKGTEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K + D+L + ++ + +P MRW + F ++RP+ ++ +L +E Sbjct: 120 QKEGKKASDILMGM-SDIVKAMTFPTKMRWGSYD-----FEFVRPIHWMVSLLGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + L ++ G T GHRF + + + D Y L+ V+ + + R+ ILN Sbjct: 170 -VVPVKLLDVVAGRKTQGHRFLG-DSVVLANADDYEEALKSQYVIANADERKGMILNQIQ 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 228 ELVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N FI V N S+ ++ GN +V+ ARL+DA F+ D+ Sbjct: 288 DENGKLINHFISVRNG-NSEYLDNVIAGNEKVLVARLDDAQFFYDEDK------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVAL 410 PL + +L +V FH KIG+ E ++R++++G + + + ++ Sbjct: 335 --------KYPLTHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNVSDTEMKD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P +P+ Sbjct: 385 FDRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLIGEDENVSVAIKESYMPTSAEGELPS 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ Sbjct: 445 TTVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPIKDVLP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F DR+K L +D+I+A+L + + I Sbjct: 505 ELIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L A + + S RI IL + +N + +I +E+ LYA Sbjct: 565 LAAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRN---ANDIDESLFQDVSEEELYAG 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ + S+ + + I +F+ ++ D +V++NRL+ L + N Sbjct: 622 VNALEANTDLSIAD-----LYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKVNN 676 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 677 LADRMGDLSKLV 688 >gi|257063815|ref|YP_003143487.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Slackia heliotrinireducens DSM 20476] gi|256791468|gb|ACV22138.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Slackia heliotrinireducens DSM 20476] Length = 694 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 197/733 (26%), Positives = 317/733 (43%), Gaps = 75/733 (10%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + EI +EE+PA H A L ++ LL+ + + + + Y TP RL + Sbjct: 1 MANKTLAFEIGTEELPAFALHDATVQLPGLVAQLLEAKRIPHGAIDVYTTPRRLITLVAD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + E GP G KA GF R G+ + ++ D A Sbjct: 61 VPEATEASEEVFRGPAARIAFDADGNPTKAALGFARGKGVDASALEL--RNENGEDYVYA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V + R + +L ++ I+ + WPKS RW + RP++ IL +L Sbjct: 119 VKKTESRDVAALLPEVLLNTIEGISWPKSQRWGAHTEL-----FSRPIRWILALL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E ++ L + G T GHRF AP +++ D + + A V+ + R +I Sbjct: 169 GETVVPLSYAGLESGRTTRGHRFLAPAEVEIACADDLLPAIRAAYVVPSEDEREASIRKQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + +GL + E+I L E+ V +G+FD+ +L +P+E+I + +Q+ F Sbjct: 229 IAAKEAELGLVADLPAKTMAEVINLTEYPTVMVGTFDELFLSVPKEIIVDAMLMHQRYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +EG L N F++ SN + A I+ GN RVVAARL DA F+ D Sbjct: 289 LFDQEGKLVNKFLITSNGDPAFE-ANIIDGNQRVVAARLYDAKFFYDED----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 L KPL+ + LD VVF K+GT + +R+ L A D Sbjct: 337 ---------LKKPLEDYVNSLDQ--VVFQEKLGTTLAKTTRVVRLAGFAADDAKVDAQVR 385 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+KADL T V EF +QG +G YA E +AI +H +PR + + Sbjct: 386 ADAQRAAYLAKADLVTGAVVEFTSVQGIMGSYYAKAAGETDEVANAIADHYRPRFAGDEL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P V+ ADKLDT+ +AI + P+GS DP+ALRRA +GI+ IL +++ L Sbjct: 446 PRGMAGRIVAFADKLDTITGLFAIGQAPTGSSDPFALRRAAIGIVG-ILNAGLNVSLGSA 504 Query: 529 IE------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 I+ + ++ FF R K+ L D D I+A+L I Sbjct: 505 IDVALANYRADGLEFDFAEVKKAVVDFFVTRTKVILKDEGNASDAIDAVLACGVTEPAVI 564 Query: 571 VDLIKHLNEFF--SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 +K L + + ++ R + ++ ++ + + +AE+ LY Sbjct: 565 ASRVKALTAAREQNRETMDNLAVAFARANNL------RDPKLGTDCNTALF-NQAEQNLY 617 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + E++ Y L + +P++ FF+ V+V +D VR NRL LL Sbjct: 618 DAAHAASIAVDEALAADDYTAALGRLAELRQPVDAFFEDVMVMDEDSAVRVNRLKLLNEF 677 Query: 689 KNIILIVINVQKI 701 N+ V + ++ Sbjct: 678 VNVFANVADFGQL 690 >gi|190576418|ref|YP_001974263.1| glycyl-tRNA synthetase subunit beta [Stenotrophomonas maltophilia K279a] gi|190014340|emb|CAQ47987.1| putative glycine-tRNA synthetase, beta subunit [Stenotrophomonas maltophilia K279a] Length = 691 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 198/727 (27%), Positives = 330/727 (45%), Gaps = 64/727 (8%) Query: 1 MPDF---LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLY 55 M L+E+ +EE+P + A+ ++ L++ G + + R TP RL + Sbjct: 1 MSQLSPLLIELGTEELPVKALPGLAQAFFDGVVEGLRKRGVALELGDARPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G+ PE+ E LGP G KA+ GF G+ + K KG+ Sbjct: 61 LPGVGLEQPEQHSEVLGPYLNIALDAEGQPTKALQGFAAKAGIDWTALE--KTTDNKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P +L I+ AI +P PK MRW A+ + RP ++ + Sbjct: 119 FVHRAVTPGASTASLLPEILREAIAAMPIPKPMRWGDH-----AWGFARPAHWLVLL--- 170 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 +++ +L + G ++ GHRFH + + Y+ L A VL+DP RR I Sbjct: 171 --HGANVVEAELFGLQAGRVSRGHRFHHDQAVSLAQPQDYVEALRAAFVLVDPSERRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A+ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VAEVEAAAAKAGGSARITDDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI++ + +G RV+ R DA F+ D Sbjct: 289 FFPVLDAAGTLTEKFIGIANIESKNVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L L V + AK+G+ ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLVSMGEGLKT--VTYQAKLGSVADKVARVAALAEVIAPQVGADA 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A RA L+K DL + +V EFPELQG G+ YAV E+ AI+E +PR +++ Sbjct: 386 AQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAVAGGESAEVALAIDEAYQPRFGGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A+++DTL +A KP+G+KDP+ALRR LG+ R I+E+ ++ L Sbjct: 446 ALSPLGKVLAIAERVDTLAGGFAAGLKPTGNKDPFALRRNALGLARTIIESGFELDLRAL 505 Query: 529 --------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + L F DRLK Y D+++ A+ + +L + Sbjct: 506 LASANAGLAARNVQADVGELYDFILDRLKGYYGDKNVPATHFNAVAELKPVSLYDFDRRL 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + F + + E + KRI IL E +I +I P L +AE+ L ++ Sbjct: 566 DAIGTFAALPEAEALAAANKRIRNILRKAE---GDIPAQIDPALLQEDAERALAEAVTAA 622 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 S+ K Y + L + ++ FFD V+VN +D +R NRL+LL + + Sbjct: 623 IDDTGASLHQKDYVAVLARLARLRPQVDAFFDGVMVNAEDPALRGNRLALLTMLGERLGK 682 Query: 695 VINVQKI 701 V ++ + Sbjct: 683 VAAIEHL 689 >gi|313618900|gb|EFR90764.1| glycyl-tRNA synthetase, beta subunit [Listeria innocua FSL S4-378] Length = 688 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 197/731 (26%), Positives = 339/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + ++ K + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVAPED--LTFREIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + + +P SM W + +IRP+K ++ + Sbjct: 119 KEVIGEKTTALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF + Y L E V+++ R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLG-KTATINQPSDYPHALLEQFVVVNASERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEGELLPHFVTVRNG-NHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGVLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEVI 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGATELPSADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LN+ + + + R+ +I E +E+ P E E+ L+ Sbjct: 564 IDRAQILNKHADAEWFRPTIEALTRVVKISKKYEDG-----VEVDPNLFENEYEQELFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKYDYAGLTIVDR----LKAFADLRTTIDGYFDNTLVMTDNDELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|16800563|ref|NP_470831.1| glycyl-tRNA synthetase subunit beta [Listeria innocua Clip11262] gi|25009313|sp|Q92BQ2|SYGB_LISIN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|16413968|emb|CAC96726.1| glyS [Listeria innocua Clip11262] Length = 688 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 197/731 (26%), Positives = 339/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + ++ K + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVAPED--LTFREIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + + +P SM W + +IRP+K ++ + Sbjct: 119 KEVIGEKTTALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF + Y L E V+++ R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLG-KTATINQPSDYPHALLEQFVVVNASERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEGELLPHFVTVRNG-NHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMERVQKVALMLADYLNWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGVLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEVI 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGATELPSADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LN+ + + + R+ +I E +E+ P E E+ L+ Sbjct: 564 IDRAQILNKHADAEWFRPTIEALTRVVKISKKYEDG-----VEVDPNLFENEYEQELFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKYDYAGLTIVDR----LKAFADLRTTIDGYFDNTLVMTDNDELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|121635587|ref|YP_975832.1| glycyl-tRNA synthetase subunit beta [Neisseria meningitidis FAM18] gi|229558566|sp|A1KW08|SYGB_NEIMF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120867293|emb|CAM11064.1| putative glycyl-tRNA synthetase beta subunit [Neisseria meningitidis FAM18] Length = 687 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 211/710 (29%), Positives = 349/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D K DVY + + + +L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAG-AKIEDLTIVHD-GKQDVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ +DAD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALDADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + E++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGEVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|294101759|ref|YP_003553617.1| glycyl-tRNA synthetase, beta subunit [Aminobacterium colombiense DSM 12261] gi|293616739|gb|ADE56893.1| glycyl-tRNA synthetase, beta subunit [Aminobacterium colombiense DSM 12261] Length = 687 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 196/722 (27%), Positives = 343/722 (47%), Gaps = 62/722 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + LLEI +EEIP+R A E + + + + + Y TP R+ L ++ Sbjct: 1 MAYKNLLLEIGTEEIPSRFLPDALETIVSYAEKEFETARIKHGRIGAYGTPRRIALTIRD 60 Query: 59 LSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + +KI GP G KA GF +S G+ K+ A Sbjct: 61 VQENQEDKIMTYKGPTWESAFDANGNPTKAAIGFAKSKGVNYEE--LTHKEVDGVRYAFA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V+ + ++++L I+ + ++ +PK+M W + RP++ I+ +L Sbjct: 119 VISEQGNPVQNLLPQILTNIMGQIVFPKNMYWLDP-----TIKFARPIRWIVALL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++I+ I G T GHRF I V ++ L + V+LD E R+ +++ Sbjct: 169 DKEIVPFTYGGIESGRTTRGHRFMGSRSIDVADASEFMEKLYDNYVILDQEKRKQKMISG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L +G ++ D +L++E + LVE+ F GSFDKK+L +PEE++ +++K +QK F Sbjct: 229 ITALEKEIGGKVELDPELVDENLYLVEFPIPFYGSFDKKFLDIPEEVLTISMKKHQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R+ G L F+ VSN +A++ G + +GN RV+ ARLEDA FW D Sbjct: 289 VRSENGKLMPFFVGVSNNRATNMG-VVREGNERVLRARLEDAAFFWAED----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVA 409 L KPL + L +V+ K+G+ +++ + L K + + + + Sbjct: 337 ---------LKKPLAGCIEGLK--SIVYQEKLGSLYDKIKATQKLAKYLCEKLGFLDEAK 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 LVDRA +LSK DL T +V EFPELQG +G+EYA+ E AI E P+ + VP Sbjct: 386 LVDRAALLSKCDLLTNMVYEFPELQGIMGREYALRNGEPERVAKAIYEQYLPKSAGDTVP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 ++ I + +A+++ ++N + +P+GS+DPYALRRA I II +D+ ++ I Sbjct: 446 SDIIGAILGIAERIFVIVNCHKVGLQPTGSQDPYALRRAARCINEIIWGVDLDVDIADLI 505 Query: 530 ED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + FF RL + L ++ HDL+ + + + + Sbjct: 506 SQAGQNFEVPEKILEQSRSFFEQRLHVQLKEKGYEHDLVTLAISVVGRKPFQALHFLNVV 565 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 N+ + + +A R+ IL+ E E S +I+ + E L+ +++ Sbjct: 566 NKVKNEEWFVDLVTAAVRVRNILSKAE----EYSKDIAQELFQKNVENELFIEMNEMTPL 621 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 ++++++ + ++ LL + I FFD V++ +D ++R NRL+LL +I V + Sbjct: 622 VEDALERYDWDELMVLLSRLSPRITAFFDDVMIMDNDLDIRQNRLALLSRCNSIFKEVGD 681 Query: 698 VQ 699 + Sbjct: 682 LG 683 >gi|166714071|ref|ZP_02245278.1| glycyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzicola BLS256] Length = 752 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 193/788 (24%), Positives = 326/788 (41%), Gaps = 125/788 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G+ + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPDLAQAFFDGVLSGLEKRGIAVTRGAAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALE--RTGDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P ++L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGGHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++I +L + IT GHRF + + Y+ L A VL+DP+ RR I Sbjct: 172 ---GNEVIPAELLGVRGDRITRGHRFMHEGAVSLAVPGDYVEALRAAHVLVDPDARRTRI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVEAAAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGTLTEQFIGIANIQSKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L L V + AK+GT ++V+R+ L + IA + D Sbjct: 340 ------------LKQGLQAMGDGL--ASVTYQAKLGTVADKVARVAALAEVIAPQVGTDP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 LQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK-------- 520 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDVDLREL 505 Query: 521 ----------------------IDIPLSQ-------------------------FIEDQN 533 + + L Sbjct: 506 LKRALNAAYNALINSAPFEVKALKLHLGDSGIVAEELPEENSAIHARRFTIPDLAPNSSE 565 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILRPEND--------------------NLLTIVDL 573 L F DRL+ Y D+ + A+ + +L Sbjct: 566 LYDFILDRLRGYYADKGVPATHFNAVAALFSGTSETAPAPTGVGAHPGATHGSLYDFDRR 625 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I + F + + + + KRI IL K EI +I L AE+ L + Sbjct: 626 IDAIGIFATLPEAQALAAANKRIRNILR---KVEGEIPGDIDTALLCEPAEESLAEAVEA 682 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +++ Y + L + ++ FFD V+VN +D ++R NRL+LL+ + + + Sbjct: 683 AIGATGDALHRHDYVAVLARLARLRPQVDAFFDGVMVNAEDPQLRANRLALLKKLGDRLG 742 Query: 694 IVINVQKI 701 V ++ + Sbjct: 743 SVAAIEHL 750 >gi|194367754|ref|YP_002030364.1| glycyl-tRNA synthetase subunit beta [Stenotrophomonas maltophilia R551-3] gi|194350558|gb|ACF53681.1| glycyl-tRNA synthetase, beta subunit [Stenotrophomonas maltophilia R551-3] Length = 691 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 200/727 (27%), Positives = 329/727 (45%), Gaps = 64/727 (8%) Query: 1 MPDF---LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLY 55 M L+E+ +EE+P + A+ ++ L++ G + + R TP RL + Sbjct: 1 MSQLSPLLIELGTEELPVKALPGLAQAFFDGVVDGLRKRGVALELGDARPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G+ PE+ E LGP G KA+ GF G+ + K KG+ Sbjct: 61 LPGVGLEQPEQHSEVLGPYLNIALDAEGLPTKALQGFAAKAGIDWTALE--KTSDNKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P +L I+ AI +P PK MRW A+ + RP ++ + Sbjct: 119 FVHRAVTPGASTASLLPEILREAIAAMPIPKPMRWGDH-----AWGFARPAHWLVLL--- 170 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 +++ +L + G ++ GHRFH + + Y+ L A VL+DP RR I Sbjct: 171 --HGANVVEAELFGLQAGRVSRGHRFHHDQAVSLAQPQDYVEALRAAFVLVDPSERRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A+ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VAEVEAAAAKAGGSARITDDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI++ D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDSGTLTEKFIGIANIESKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L L V + AK+G+ ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLVSMGDGLKT--VTYQAKLGSVADKVARVAALAEVIAPQVGADA 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A RA L+K DL + +V EFPELQG G+ YAV E AI+E +PR +++ Sbjct: 386 AQAKRAAQLAKNDLQSRMVNEFPELQGIAGRHYAVAGGEAEEVALAIDEAYQPRFGGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A+++DTL +A KP+G+KDP+ALRR LG+ R I+E+ ++ L Sbjct: 446 ALSPLGKVLAIAERVDTLAGGFAAGLKPTGNKDPFALRRNALGLARTIIESGFELDLRAL 505 Query: 529 --------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + L F DRLK Y D+ + A+ + +L + Sbjct: 506 LASANAGLAARNVQADVGELYDFILDRLKGYYSDKGVPATHFNAVAELKPTSLYDFDRRL 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + F + + E + KRI IL E +I +I P L +AE+ L ++ Sbjct: 566 DAIGTFAALPEAEALAAANKRIRNILRKAE---GDIPGQIDPALLQEDAERALAEAVTAA 622 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 S+ K Y + L + + ++ FFD V+VN DD +R NRL+LL + + Sbjct: 623 IDDTGTSLQQKDYVAVLARLARLRQQVDAFFDGVMVNADDLALRGNRLALLTMLGERLGK 682 Query: 695 VINVQKI 701 V ++ + Sbjct: 683 VAAIEHL 689 >gi|167561612|ref|ZP_02354528.1| glycyl-tRNA synthetase subunit beta [Burkholderia oklahomensis EO147] Length = 699 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 204/714 (28%), Positives = 334/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + + L +I +Y TP RL + ++ + +PEK E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAACDLIEGELAFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K D + P + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGRPNLSIADLERAHDGKADAFFVNYAAPGASLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + E+++ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HDERVVPVSAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L E V+ R+ AI A G E Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHASAYADTLREKGRVIAHFAGRKEAIRTQLDAHAE--GDE 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+Q R+ R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSQLARIERLETLAGEIAPAIGADATIAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACTEHYQPRFSGDTLPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L L IV + + EF + E Sbjct: 527 AESTDAIYAFFIDRLRGLLRERGYSAGEVDAVLSLNPTRLDDIVARLDAVREFARLDESE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P + AEK L+ +++ +Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSESGANGAVQPALFVEVAEKALHEQLAEVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKL 697 >gi|332686711|ref|YP_004456485.1| glycyl-tRNA synthetase beta chain [Melissococcus plutonius ATCC 35311] gi|332370720|dbj|BAK21676.1| glycyl-tRNA synthetase beta chain [Melissococcus plutonius ATCC 35311] Length = 693 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 199/732 (27%), Positives = 338/732 (46%), Gaps = 71/732 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EEIPA + + L ++ L E+ + Y+ ++ + TP RL +Y+ + Sbjct: 1 MAKDLLLEIGLEEIPANLVTPSRLQLEERIVQFLNEQRLTYETIQTFSTPRRLAVYVSEI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF G++T D I ++ + Sbjct: 61 PDEQEDIYEEVKGPAKKIALDNEGNWTKAAQGFAIGQGVET--DAIIFRELMGIEYAYIT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +VL + I + +P +M WS +IRP+ I + Sbjct: 119 KYIKGQAAVNVLTG-LKEIILSMTFPVTMCWSNYD-----LDYIRPIHWITALF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I + + NI+ GHR I ++ Y L E V+ DP+ R+ I Sbjct: 168 EQVIPFSILNVQTNNISQGHRSLGDQ-IIIRQASDYQTKLSEQFVIADPKERKRIIQQQM 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++ L+ D+ LLEE+ LVE+ F+G+F +KYL +P+E++ ++K +Q+ F Sbjct: 227 EEISQKNNWHLIYDEALLEEVTNLVEYPTAFVGNFSEKYLAIPKEILITSMKDHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI V N ++QGN +V+ ARLEDA F+ D+ Sbjct: 287 YNHEGDLLPHFISVRNGD-QVHLKNVIQGNEKVLVARLEDAEFFYNEDKKLSITTC---- 341 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 + +L V FH KIGT E++ R+ ++ + I + + ++ Sbjct: 342 ----------------VNKLKQ--VTFHDKIGTIYEKMQRVCLISQIIGKKVGLTKTELL 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNVVNEFPELQGIMGEKYALLHGEKPNVAQAIREHYLPISSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 T+ I +++ADKLD++ +F+A + PSGS DPYALRR T GIIRI+ ENK + P+ Q Sbjct: 444 TSIIGSVLAVADKLDSVFSFFAKDMIPSGSNDPYALRRQTYGIIRIVAENKWEFPIIQLQ 503 Query: 530 -------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ++ ++ F R++ L RHD+I+A++ E +LL + Sbjct: 504 KEIYAAINAKESFGIKLNDDNMQVVDFIKGRIRQLLSSEHFRHDIIDAVISSEQQDLLKL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L + + + + + R+ + ++ +E L + + +E++LY Sbjct: 564 LTTAKTLRKHLADDDFKASIEALTRVINLAEKGKELMKEPILTVELELFENNSEEKLYEA 623 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + E + Y + + + IE +FDQ +V +D+ +++NRL L I Sbjct: 624 VQKISANFDEQTIDENYDALMN----LRILIENYFDQTMVMTEDKAIKNNRLKQLLQIAQ 679 Query: 691 IILIVINVQKIV 702 + + ++ Sbjct: 680 MASSIARFDLLI 691 >gi|240015731|ref|ZP_04722271.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA6140] Length = 687 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 209/710 (29%), Positives = 347/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D + DVY + R + +L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GRQDVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + + +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADIALL 685 >gi|325983624|ref|YP_004296026.1| glycyl-tRNA synthetase, beta subunit [Nitrosomonas sp. AL212] gi|325533143|gb|ADZ27864.1| glycyl-tRNA synthetase, beta subunit [Nitrosomonas sp. AL212] Length = 731 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 204/746 (27%), Positives = 356/746 (47%), Gaps = 90/746 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + +L L+ +G++ Q+ + Y TP RL +++ ++ + +K + ++ Sbjct: 16 PPKSLKQLGDSFAQLLTASLEAQGLMSQDAPVTAYATPRRLAVHIGNVAAQAADKAVTQK 75 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 L P G + L S G Q+K + K + + D Sbjct: 76 LMPVKVGLDAQGQATPPLLKKLASLGADASVVPQLKHELDGKTETLFWDSIATGTALTDG 135 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + I ++P PK M + S+ +++RP+ +++ + A+ I+ L + + Sbjct: 136 LQKALQETITQLPIPKVMTYQLADG-WSSVNFVRPVHALVALHGAD-----IVPLTILGL 189 Query: 184 PCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGL 241 G T GHRF A +PI + + D Y + L V+ RR I + A+ L Sbjct: 190 QAGRETQGHRFEAKVNPIVLHNADSYAQQLLTEGAVMAGFVDRRTEITHQLAVSAAKENL 249 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 ++D LL+E+ LVE V +G FD +L +P+E + LT+K NQK F +G LAN Sbjct: 250 TPIDDDALLDEVTALVEHPNVLVGKFDAAFLQVPQECLILTMKANQKYFPLLDAQGKLAN 309 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F+LVSNI+ + A ++ GN RVV +RL DA F+ +D+ Sbjct: 310 KFLLVSNIRPT-NPAQVIAGNERVVRSRLADAKFFFDQDR-------------------- 348 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRAIVLSK 419 K L R+ LD +V++H K+G QG+R+ +R + K I Q ++ + A +L+K Sbjct: 349 KKTLASRVPELD--EVIYHNKLGVQGQRMHYVRAIAKMIGQQLNGEILANQAYTAAMLAK 406 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T +V EFPELQG +G+ YA AIE+H KPR +++P N++ I ++L Sbjct: 407 TDLLTGMVGEFPELQGIMGRYYAQYDGLGNDIAFAIEDHYKPRFAGDDLPRNEVGICLAL 466 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN------ 533 ADKL+ L+ + I E P+G KDP+ALRR LG++RI++E K+ + L+ I Sbjct: 467 ADKLEILVGMFGIGEIPTGDKDPFALRRHALGVVRILIEKKLPLELNTLIMQTASIFNDQ 526 Query: 534 --------------------------------------LILFFHDRLKLYLHDRDIRHDL 555 L+ F ++RL L ++ Sbjct: 527 MIENQWSKSYFDWKKKSEMKALAVGVRGLNIKEESTGRLLEFIYERLAGSLREQGYTAQE 586 Query: 556 IEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS 615 ++A+L NL I + + F + + KR+ IL K + S++++ Sbjct: 587 VDAVLSLNPQNLSDIPKRLAAVRSFAVLPEAVSLAAANKRVGNILK---KTEGDTSVKVN 643 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 L AE++LY V+ D + ++ + Y +L ++ P++ FFD V+VN+D+ Sbjct: 644 SSLLQEPAEQKLYDVLIDLSIEVDGALFARDYKAYLQILAALKLPVDTFFDHVMVNIDNE 703 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKI 701 +R+NRL+LL+ + +I+ + ++ K+ Sbjct: 704 SLRNNRLALLRELHDIMNRIADLSKL 729 >gi|22299735|ref|NP_682982.1| glycyl-tRNA synthetase subunit beta [Thermosynechococcus elongatus BP-1] gi|22295919|dbj|BAC09744.1| glycyl-tRNA synthetase beta chain [Thermosynechococcus elongatus BP-1] Length = 727 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 212/745 (28%), Positives = 342/745 (45%), Gaps = 77/745 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLE+ +E++PAR A ++ LKE G+ + + TP RL + ++GL P Sbjct: 7 HTFLLEVGTEDLPARFVSSALRQWRTLIPQTLKERGLT-GEVNVWATPRRLAVLIEGLPP 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRS-TGLQTISDCQIKKDPKKGDVYLAVLR 114 P+++ E GP G A+ GFLRS G ++ D +I+ KG+V Sbjct: 66 QQPDQVVEIKGPAATVAFREGEPTPALLGFLRSRQG--SLEDIEIRP-TAKGEVVYLKQV 122 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + +L + I + P+ MRW + RP++ + +L E Sbjct: 123 RPGQPTPQLLSELAQQWIAALEGPRFMRWGDGD-----LRFSRPIRWL-VLLWDERVLPL 176 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ I TYGHR + I + Y LE+A VL+DPE R+ I Sbjct: 177 VLESHSVAIASDRTTYGHRVLSQGAIVLSHAQDYATALEKAGVLVDPEVRQQRIREQIAA 236 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA+ G + LLEE+ LVEW +GSF+ ++L LP E+I + ++Q+ F T Sbjct: 237 LAAEAGGWTDLEVPLLEEVTHLVEWPTAVLGSFEARFLALPLEVITTVLVSHQRYFPVYT 296 Query: 295 REGV--LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L FI +SN + I GN RV+ ARL DA F+K D Sbjct: 297 DATRQALLPVFITISNGAPAATP-LIRGGNERVIRARLADAEFFYKADT----------- 344 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++PL+ +L V F ++G+ ++V R+ L ++IA ++ A+VA Sbjct: 345 ---------AQPLEHYCGKLAT--VTFQDELGSMADKVERLTALARQIATALNCTAAEVA 393 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 ++R L KADL T++V EFPELQG +G+ YA + E + I EH PR + P Sbjct: 394 AIERTASLCKADLVTQMVGEFPELQGYMGQVYATVSGEAPAVATGIFEHYLPRFAGDRQP 453 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + V LAD+LDTL++ + + P+GS DP+ALRRA G+I I+ + + + L + Sbjct: 454 QSLTGQVVGLADRLDTLVSLFGLGLCPTGSSDPFALRRAANGVITILWQGEHHLNLLALL 513 Query: 530 EDQ-------------------NLILFFHDRLK-LYLHDRDIRHDLIEAILRPEN----- 564 ++ L FF RL+ L D I +DL+ A++ + Sbjct: 514 QEYAQAFCRQFAAKLSAADLEQQLRQFFSQRLRTLLQEDLGIEYDLVNAVIPEDQPELQI 573 Query: 565 ---DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL-EISPQYLL 620 +++ D + L + S + + R ++ +++ + ++L Sbjct: 574 RALRDVVDARDRAQFLQKLRQSGELMAIYPTVNRAARLARQGTLGTDCLNIRAVKAKHLE 633 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREV 677 EK YA + D +Q++ + Y I D L S+ + FFD VLV +D V Sbjct: 634 TPIEKEFYAALKDILPTVQQAQGQRAYGAIVDALVSLAPIVSRFFDGEESVLVMAEDATV 693 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 R NRL+LL ++N I+ + IV Sbjct: 694 RANRLALLGLLRNCAAIIGDFGAIV 718 >gi|299532684|ref|ZP_07046072.1| glycyl-tRNA synthetase beta subunit [Comamonas testosteroni S44] gi|298719319|gb|EFI60288.1| glycyl-tRNA synthetase beta subunit [Comamonas testosteroni S44] Length = 704 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 208/730 (28%), Positives = 357/730 (48%), Gaps = 61/730 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN---MRQYWTPHRLFLYLKG 58 + L+E++ EE+P + K + + ++ LK +G++ + + Y +P RL ++ Sbjct: 4 SNLLVELFVEELPPKALQKLGDAFAAVIFEQLKAQGLLASSESRLTAYASPRRLAAHITE 63 Query: 59 LSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYL 110 + P + +K + ++L P G A+ L + G + +K+ K + Sbjct: 64 VLPQAEDKAVSQKLMPVSVALDAEGKPTAALLKKLAALGADESAVAALKRQGEGKAEALF 123 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 L+ D ++ + A+ K+P PK MR+ ++ ++RP ++ + + Sbjct: 124 YESTAKGVLLTDGVQKALDEALAKLPIPKVMRYQLQDG-WTSVHFVRPAHGLVVMHGTQV 182 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAI 228 I + + G T+GHRF A P+ +Q+ D Y L E V+ RR I Sbjct: 183 L----IGVKALGLTAGAATHGHRFEAAVDPVVIQNADSYAEQLREEGAVIASFTERRADI 238 Query: 229 LNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 A +G ++D LL+E+ LVE V + F+K++L +P+E + LT+K N Sbjct: 239 ARQLQAAAERIGGDVRPIDDPALLDEVTALVELPNVLVCEFEKEFLAVPQECLILTMKAN 298 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F G L + F++VSNIQ D +A+V GN RVV RL DA F+ +D+ Sbjct: 299 QKYFPLLDANGKLTHQFLIVSNIQPQDA-SAVVGGNERVVRPRLADAKFFFDQDR----- 352 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 K L R+ +LD VV+H K+GTQGER++R+R + K IAQ + Sbjct: 353 ---------------KKTLASRVEQLD--KVVYHNKLGTQGERIARVRAIAKSIAQQLGN 395 Query: 407 DV--ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 L D+A +L+K DL T++V EFPELQG +G+ YA +++ DAIE+H KPR Sbjct: 396 SELGRLADQAAMLAKTDLVTDMVGEFPELQGIMGRYYAQNDGLDVAVADAIEDHYKPRFA 455 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E +++ Sbjct: 456 GDELPRGDVGVIVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVEKDLELD 515 Query: 525 LSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 L L+ F +DRL ++ +EA+L + L + Sbjct: 516 LETLLVSTLPAFGDKIQDATPQLVEFIYDRLANMFREQGYSAQEVEAVLALQPQRLSDVQ 575 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + F + + + KR+ IL E ++ +++ L+ +AEK LYAV+ Sbjct: 576 KRLEAVRAFAALPEAPALAAANKRVGNILKKAE---TDVQPQVNEALLVEQAEKELYAVL 632 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 Q+ Y L ++ ++ FF+QV+VN +D +R NRL LL + Sbjct: 633 QQVAPKAQQQFAAGDYTASLQTLAALRASVDAFFEQVMVNAEDPALRTNRLGLLASLHEA 692 Query: 692 ILIVINVQKI 701 + V ++ ++ Sbjct: 693 MNRVADLARL 702 >gi|121603358|ref|YP_980687.1| glycine--tRNA ligase [Polaromonas naphthalenivorans CJ2] gi|229558568|sp|A1VJD8|SYGB_POLNA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120592327|gb|ABM35766.1| glycyl-tRNA synthetase beta chain [Polaromonas naphthalenivorans CJ2] Length = 711 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 202/738 (27%), Positives = 340/738 (46%), Gaps = 68/738 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K + + +L LK G+ + Y +P RL ++ + Sbjct: 4 KNLLVELFVEELPPKALKKLGDAFAGVLAEQLKALGLATAESVVTAYASPRRLAAHISHV 63 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTIS-----DCQIKKDPKKGD 107 + +K ++++L P G A+ L++ G + K + Sbjct: 64 WLKADDKAVQQKLMPVSVGLDSAGHATPALLKRLQALGADLSDPVAAVAALKRAPDGKAE 123 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS----PISAFSWIRPLKSIL 163 ++ L+ + AI K+P PK M + ++ +++RP ++ Sbjct: 124 ALFYNSLVTGATLDTGLQKALEEAIAKLPIPKVMSYQLETDCELPGWTSVNFVRPAHGLV 183 Query: 164 CILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDP 221 + ++ + + + GN T GHRF A P+ + D Y LE V+ Sbjct: 184 AL-----HGSTVVPVKVLGLKAGNSTRGHRFEAAVDPVVLADADSYAVTLEIDGAVIASF 238 Query: 222 ECRRNAILNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELI 279 R+ I A+ +G + +ED LL+E+ LVE V + F+K++L +P+E + Sbjct: 239 AQRKAEIARQLAEAAAELGGGVQPIEDDALLDEVTALVERPNVLVCEFEKEFLDVPQECL 298 Query: 280 RLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 LT+K NQK F G L N F++VSNI D + ++ GN RVV RL DA F+ + Sbjct: 299 ILTMKANQKYFPLLDAAGKLTNKFLVVSNISPEDA-SFVIGGNERVVRPRLADAKFFFDQ 357 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ + L R+ L VV+H K+GTQGER R+ + K Sbjct: 358 DR--------------------KRTLASRVEGLG--KVVYHNKLGTQGERTERVAEIAVK 395 Query: 400 IAQLIDADVALVDRAI--VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 IAQL++ D L+KADL T++V EFPELQG +G+ YA+ + AIE+ Sbjct: 396 IAQLLEGDALAGKAGKAAWLAKADLLTDMVGEFPELQGTMGRYYALHDGHSAEIAAAIED 455 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H KPR + +P N + + V+LADKL+TL+ + I P+G KDP+ALRR LG+IR+++ Sbjct: 456 HYKPRFAGDELPRNPVGVVVALADKLETLVGMFGIGNLPTGDKDPFALRRHALGVIRMLV 515 Query: 518 ENKIDIPLSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 E + + L L+ F +DRL L ++ +++++ + Sbjct: 516 EKDLPLDLGALVGGAAPVFGDKITDATPALLDFIYDRLSGSLREQGYSAQEVDSVVSQKP 575 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 L + + + F + + + KRI IL E E+ +S L AE Sbjct: 576 QRLGDVPKRLAAVRAFAALPEAPALAAANKRIGNILKKE---ALEVDPHVSELLLREAAE 632 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 LYA + D D Y L ++ P++ FFD V+VN ++ ++R NR L Sbjct: 633 IALYAAMRDVVPTANAQFDTGDYTASLQTLAALRAPVDAFFDGVMVNAEELDLRLNRQGL 692 Query: 685 LQYIKNIILIVINVQKIV 702 L+ + N + V ++ ++V Sbjct: 693 LKSLHNAMNRVADLSRLV 710 >gi|268319375|ref|YP_003293031.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii FI9785] gi|262397750|emb|CAX66764.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii FI9785] Length = 690 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 202/732 (27%), Positives = 346/732 (47%), Gaps = 77/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSKSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF+R G+ T I + KG Y V + Sbjct: 63 KQEDIDEVKKGPAKKIAQDKDGNWTKAAQGFVRGQGMTTDD---IYFEELKGTEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K + D+L + ++ + +P MRW + F ++RP+ ++ +L +E Sbjct: 120 QKEGKKASDILMGM-SDIVKAMTFPTKMRWGSYD-----FEFVRPIHWMVSLLGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + L ++ G T GHRF + + + D Y L+ V+ + + R+ ILN Sbjct: 170 -VVPVKLLDVVAGRKTQGHRFLG-DSVVLANADDYEEALKSQYVIANADERKGMILNQIQ 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 228 ELVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N FI V N S+ ++ GN +V+ ARL+DA F+ D+ Sbjct: 288 DENGKLINHFISVRNG-NSEYLDNVIAGNEKVLVARLDDAQFFYDEDK------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVAL 410 PL + +L +V FH KIG+ E ++R++++G + + + ++ Sbjct: 335 --------KYPLAHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNVSDIEMKD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P +P+ Sbjct: 385 FDRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLIGEDENVSVAIKESYMPTSAEGELPS 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ Sbjct: 445 TTVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPIKDVLP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F DR+K L +D+I+A+L + + I Sbjct: 505 ELIQLLSDKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L A + + S RI IL + +N + +I +E+ LYA Sbjct: 565 LAAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRN---ANDIDENLFQDVSEEELYAG 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ + S+ + + I +F+ ++ D +V++NRL+ L + N Sbjct: 622 VNALEENTDLSIAD-----LYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKVNN 676 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 677 LADRMGDLSKLV 688 >gi|240079865|ref|ZP_04724408.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA19] gi|268596010|ref|ZP_06130177.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA19] gi|268549798|gb|EEZ44817.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA19] Length = 687 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 209/710 (29%), Positives = 345/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I + DVY + + + +L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAGAKIEDLTIIH--DGRQDVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 NIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAMPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|313623739|gb|EFR93881.1| glycyl-tRNA synthetase, beta subunit [Listeria innocua FSL J1-023] Length = 688 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 197/731 (26%), Positives = 341/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + ++ K + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVAPED--LTFREIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + + +P SM W + +IRP+K ++ + Sbjct: 119 KEVIGEKTTVLLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF ++ Y L E V+++ R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLG-KTATIKQPSDYPHALLEQFVVVNASERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEGELLPHFVTVRNG-NHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P ++P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEVI 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGATELPSADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LN+ + + + R+ +I E +E+ P E E+ L+ Sbjct: 564 IDRAQILNKHADAEWFRPTIEALTRVVKISKKYEDG-----VEVDPNLFENEYEQELFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKYDYAGLTIVDR----LKAFADLRTTIDGYFDNTLVMTDNDELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|188996975|ref|YP_001931226.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium sp. YO3AOP1] gi|229558585|sp|B2V9P9|SYGB_SULSY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|188932042|gb|ACD66672.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium sp. YO3AOP1] Length = 678 Score = 545 bits (1404), Expect = e-152, Method: Composition-based stats. Identities = 197/717 (27%), Positives = 347/717 (48%), Gaps = 56/717 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKG 58 M +LLEI EE+P + E L K+ + +N++ Y TP RL + +K Sbjct: 1 MKSYLLEIGCEELPPKAILTYKEFLKEYAHQTFKDFFIYNSPENIKIYATPRRLAVLIKN 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L + +GP G KA F + +I +KG+ A Sbjct: 61 LKKKQDNQKITLIGPPYKVAVDSEGKFTKAALSFAEKNNIPLEKLEKI--TTEKGEYLGA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + K +E +K +P + P KSM+W+ + + + RP++ I+ +L Sbjct: 119 TIEKEGESLELFIKHKIPQLFNQFPQLKSMKWNNSD-----YRFPRPIRWIVSLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-----HPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 +K+I+ ++ + T+ HRF + + Y + ++ + E R++ Sbjct: 169 DDKVIEFEVASVKTDRFTHLHRFMTKPIGRGERKDINHANDYEEITKLGYIIANFEDRKH 228 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 +I A + ++ED +L++EI L E+ +G F +YL LP+E+I K + Sbjct: 229 SIKTQYEGFARQLNASIIEDDELIDEITCLTEFPVGIVGDFSPEYLTLPKEVIITVCK-H 287 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 + ++ ++G L F+ SN D + G +V+ ARLEDAL F+K D Sbjct: 288 HQRYLNFEKDGKLIPKFLAFSNNAVKDR-DIVKNGYEKVLRARLEDALFFYKED------ 340 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID- 405 L K LD + +L + FH K+G+ ++V R L K+A L Sbjct: 341 --------------LKKKLDDNIEKLK--GIQFHEKLGSMYDKVLRNLELALKLADLTGY 384 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 D + RA++LSKADL TE+V+EF ELQG +G Y+ Q E +I EH P+ Sbjct: 385 KDAEKIKRAVMLSKADLLTEMVKEFDELQGIMGMYYSQKQGEEEEISKSIYEHYLPKTAE 444 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +N+P + ++LADKLDT+I+F I E P S DP+ +RR +GI+R+++E +ID+ L Sbjct: 445 DNIPETNLGTLLALADKLDTVISFIKIGELPKPSADPFGIRRNAIGIVRLLVEKEIDLDL 504 Query: 526 SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + I+D++++ F RL+ YL + + D+I A+L ++ N+ +K L++ + Sbjct: 505 RKVIDDESILDFILSRLESYLQSKGYKTDIINAVLSLKDGNIYRNYLKVKALSQLRNLPD 564 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E ++ KR+ I+ + K + + L+ + EK LY + + +++K Sbjct: 565 YENVIMVFKRVGNIIPEDFKFS-----NVDVNLLVSQPEKELYKKFIEIKDKFKRFIENK 619 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y + LL + I+ FFD V++ V+D ++++NRLSLL+ I ++ + + K++ Sbjct: 620 DYDKALGLLLELKPYIDRFFDNVMIMVEDEKLKNNRLSLLKEINDLFRNIADFTKLI 676 >gi|254492884|ref|ZP_05106055.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 1291] gi|226511924|gb|EEH61269.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 1291] Length = 687 Score = 545 bits (1404), Expect = e-152, Method: Composition-based stats. Identities = 211/710 (29%), Positives = 346/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D + DVY + + + +L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAG-AKIEDLTIVHD-GRQDVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAMPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|148543972|ref|YP_001271342.1| glycyl-tRNA synthetase subunit beta [Lactobacillus reuteri DSM 20016] gi|184153367|ref|YP_001841708.1| glycyl-tRNA synthetase subunit beta [Lactobacillus reuteri JCM 1112] gi|227364885|ref|ZP_03848931.1| glycine--tRNA ligase [Lactobacillus reuteri MM2-3] gi|325682490|ref|ZP_08162007.1| glycyl-tRNA synthetase beta subunit [Lactobacillus reuteri MM4-1A] gi|166980040|sp|A5VJI1|SYGB_LACRD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229470700|sp|B2G6Z6|SYGB_LACRJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|148531006|gb|ABQ83005.1| glycyl-tRNA synthetase beta chain [Lactobacillus reuteri DSM 20016] gi|183224711|dbj|BAG25228.1| glycyl-tRNA synthase beta subunit [Lactobacillus reuteri JCM 1112] gi|227070089|gb|EEI08466.1| glycine--tRNA ligase [Lactobacillus reuteri MM2-3] gi|324978329|gb|EGC15279.1| glycyl-tRNA synthetase beta subunit [Lactobacillus reuteri MM4-1A] Length = 691 Score = 545 bits (1404), Expect = e-152, Method: Composition-based stats. Identities = 195/733 (26%), Positives = 356/733 (48%), Gaps = 75/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + +LLE+ EE+PA + + + L + LKE+ + + +++++ TP R+ L + GL Sbjct: 1 MANTYLLEVGVEEMPAHVVTPSIKQLHERVAKYLKEQRITFDDIQEFATPRRMALLIHGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S P+ E GP G KA GF R G K+ K + Sbjct: 61 SDKQPDIDESVKGPAKKIAQDADGNWTKAAIGFTRGQGASVEDIEF--KEVKGVEYVFVE 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +VL+ +P I + +P M+W + +IRP++ ++ +L Sbjct: 119 KHIAGKTVAEVLQG-LPAVITSMTFPTLMKWG-----YNNLQFIRPIRWLVSLL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ ++ ++ G T GHRF P+++ D Y L V+ D R+N I + Sbjct: 168 DEVVPFNILDVEAGRETQGHRFLGH-PVEIAKADDYEETLNNDFVIADQTKRKNLIKDQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++ + ++ D+DLLEE+ LVEW F GSFD+KYL LP+ ++ ++K NQ+ F Sbjct: 227 TKIINENNWQVDWDEDLLEEVNNLVEWPTAFAGSFDEKYLALPDPVLITSMKDNQRFFCV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G L + FI V N +D +++GN RV+ RLEDA F++ DQ Sbjct: 287 RDGDGNLLSHFISVRNG-NTDYLDNVIKGNERVLVPRLEDAQFFYQEDQKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +D+ + RL V FH KI + +++ R+ V+ + + ++ ++A Sbjct: 337 -----------TIDEYVERLK--KVSFHDKISSMYDKMQRVAVIANVLGKQLNLSDEELA 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA + K DL T++V EF ELQG +G+ YA L E AI EH P +P Sbjct: 384 DLDRAAHIYKFDLTTQMVGEFAELQGIMGEIYAKLFGEKDDVATAIREHYMPISAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 KI +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + +PL Sbjct: 444 QTKIGAVLAIADKLDSIMSFFAVDMIPSGSNDPYALRRQAFGIVRIIADRGWHLPLLSIQ 503 Query: 530 --------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + FF DR+K H + +RHD+I+A +++ Sbjct: 504 SEIAPAFENAEINVSFDLNKNSDEVRSFFLDRIKQLFHGQKVRHDIIDAATDTRQNDIAN 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I++ I+ +++ ++ + + R+ +I +++ E+ + P +E +++ Sbjct: 564 ILEAIQTIDDHKDDDNFKEDIEALTRVLRIAKKDKRPVSEL--VVDPNLFENPSEAKMHT 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +S+ Q+++ L ++ I +FD+ ++ + ++R+NRL+ L + Sbjct: 622 AVSELIKENQQTVSEN-----FAALRTLTPIISEYFDENMIMDKNEDIRNNRLAQLSILA 676 Query: 690 NIILIVINVQKIV 702 + ++ N+ ++ Sbjct: 677 HQASLIGNLDNLI 689 >gi|240127362|ref|ZP_04740023.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-93-1035] gi|268685735|ref|ZP_06152597.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-93-1035] gi|268626019|gb|EEZ58419.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-93-1035] Length = 687 Score = 545 bits (1404), Expect = e-152, Method: Composition-based stats. Identities = 212/710 (29%), Positives = 347/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G I D I D + DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAG-AKIEDLTIVHD-GRQDVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADIALL 685 >gi|30249172|ref|NP_841242.1| glycyl-tRNA synthetase, beta subunit [Nitrosomonas europaea ATCC 19718] gi|81838735|sp|Q82VB0|SYGB_NITEU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|30180491|emb|CAD85097.1| Glycyl-tRNA synthetase, beta subunit [Nitrosomonas europaea ATCC 19718] Length = 715 Score = 545 bits (1404), Expect = e-152, Method: Composition-based stats. Identities = 203/730 (27%), Positives = 347/730 (47%), Gaps = 74/730 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + K + ++ LK + + + + + +P RL ++L + +P+++ + Sbjct: 16 PPKSLDKLGNAFAAVIADSLKSQNLTTPDTILTAFASPRRLAVHLTAIPAQAPDQVVALK 75 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 L P G A+ L + G++ + +K+ K ++ L+ Sbjct: 76 LMPITVGLDAQGQPTPALHKKLAALGMENVDASALKRVQESKAEMLFLEQNVTGILLAAG 135 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + AI+++P K M + ++RP+ ++ + +KII + + Sbjct: 136 LQKAMEDAIRQLPVSKVMTYQ-LDDGWENVHFVRPVHGLIAL-----HGQKIIPVSAFGL 189 Query: 184 PCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGL 241 GN T GHRF + + D Y LE V+ + RR+ I ASAV L Sbjct: 190 TAGNTTRGHRFEVKQTELIIDHADRYASLLETEGAVIPGFDRRRSWIREGLEAAASAVQL 249 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 + D+ LL+E+ LVE+ + MG+F +L +P+E + T+K NQK F +G L N Sbjct: 250 RCISDEVLLDEVTALVEYPNILMGAFPTDFLEVPQECLISTMKINQKYFPLLDTDGKLTN 309 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++V+NI +D G I+ GN RV+ +RL DA F+ D+ Sbjct: 310 QFLIVANITPADPGQ-IISGNERVIRSRLADAKFFFDHDR-------------------- 348 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRAIVLSK 419 + L R+ LD V++H ++G+QGER ++ L + I +L+ D D+A +L+K Sbjct: 349 KRTLASRLPDLD--KVIYHHQLGSQGERTRYVQTLARIIGRLLGDDNLAGQADQAAMLAK 406 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL T++V EFPELQG +G+ YA + + + AIE+H KPR + +P + I V+L Sbjct: 407 ADLLTDMVGEFPELQGIMGRYYARFEGMDETIAFAIEDHYKPRFAGDVLPRSMAGICVAL 466 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------- 532 ADKL+TLI+ ++I + P+G KDPYALRR LG+IRI++E + I L I Sbjct: 467 ADKLETLISLFSIGQLPTGDKDPYALRRHALGVIRILIEKNLPIGLDVLISRAADVLQDE 526 Query: 533 ---------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 L FF+DRL L D+ +EA+L L I Sbjct: 527 MIGKQDSGPGHARPVTPQLVGQLQDFFYDRLAASLRDQGYTAQEVEAVLNLRPSLLCEIP 586 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + + F + + + KR+ IL K + ++ I L AE LY + Sbjct: 587 RRLAAVRAFAALPEAASLAAANKRVGNILK---KSECDATVAIDEACLQASAEITLYRAL 643 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 S+ + +++ + Y +L ++ P++ FFDQV+VN ++ +R NRL+LL ++ Sbjct: 644 SEIESDARQAFQNGDYVTALQILAALKAPVDAFFDQVMVNDENEALRRNRLALLMALQAT 703 Query: 692 ILIVINVQKI 701 + V ++ ++ Sbjct: 704 MNRVADISRL 713 >gi|237756328|ref|ZP_04584880.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium yellowstonense SS-5] gi|237691514|gb|EEP60570.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium yellowstonense SS-5] Length = 678 Score = 545 bits (1404), Expect = e-152, Method: Composition-based stats. Identities = 200/717 (27%), Positives = 348/717 (48%), Gaps = 56/717 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKG 58 M +LLEI EE+P + E L + K+ + +N++ Y TP RL + +K Sbjct: 1 MKSYLLEIGCEELPPKAILTYKEFLKEYVSQTFKDFFIYNSPENIKIYVTPRRLAVLIKN 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L + +GP G KA F + +I +KG+ A Sbjct: 61 LKERQDNQKITLIGPPYKVAIDSEGKFTKAALSFAEKNNIPLEKLEKI--TTEKGEYLGA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + K +E +K P + P KSM+W+ + + + RP++ I+ +L Sbjct: 119 TIEKEGESLESFIKHNTPQLFNQFPQLKSMKWNDSD-----YRFPRPIRWIVSLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-----HPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 +K+ID ++ + TY HRF + + Y + ++ + E R++ Sbjct: 169 DDKVIDFEVASVKADRFTYLHRFMTKPIGRGERKDINHANDYEEITKLGYIIANFEDRKH 228 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 +I A + ++ED +L++EI L E+ +G +YL LP+E I K + Sbjct: 229 SIKTQYEGFARQLNASIIEDDELIDEITCLTEFPVGIVGDLSPEYLTLPKEAIITVCK-H 287 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 + ++ ++G L F+ SN D + G +V+ ARLEDAL F+K D Sbjct: 288 HQRYLNFEKDGKLIPKFLAFSNNAVKDR-DVVKNGYEKVLRARLEDALFFYKED------ 340 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID- 405 L K LD + +L + FH K+G+ ++V R L K+A LI Sbjct: 341 --------------LKKKLDDNIEKLK--GIQFHEKLGSMYDKVLRNLELALKLADLIGY 384 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 DV + RA++LSKADL TE+V+EF ELQG +G Y+ Q E +I EH P+ Sbjct: 385 KDVEKIKRAVMLSKADLLTEMVKEFDELQGIMGMYYSQKQGEEEEISRSIYEHYLPKTAE 444 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +N+P + ++LADKLDT+I+F I E P S DP+ +RR +GI+R+++E +ID+ L Sbjct: 445 DNIPETNLGTLLALADKLDTVISFIKIGELPKPSADPFGIRRNAIGIVRLLVEKEIDLDL 504 Query: 526 SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + I+D++++ F RL+ YL + + D+I A+L ++ N+ +K L++ + Sbjct: 505 RKVIDDESILDFILSRLESYLQSKGYKTDIINAVLSLKDGNIYRNYLKVKALSQLRNLPD 564 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E ++ KR+ I+ + + S + L+ E EK LY + ++ +++K Sbjct: 565 YENVIMVFKRVGNIIPEDFR-----SSNVDVNLLVSEPEKELYKKFIEIKDKFKQFIENK 619 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y + L+ + I+ FFD V++ V+D ++++NRLSLL+ I ++ + + K++ Sbjct: 620 DYDKALGLMLELKPYIDRFFDNVMIMVEDEKLKNNRLSLLKEINDLFRNIADFTKLI 676 >gi|240114820|ref|ZP_04728882.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID18] gi|268600476|ref|ZP_06134643.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID18] gi|268584607|gb|EEZ49283.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID18] Length = 687 Score = 545 bits (1404), Expect = e-152, Method: Composition-based stats. Identities = 205/710 (28%), Positives = 344/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I + DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAKIEDLTIIH--DGRQDVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + + +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADIALL 685 >gi|240117022|ref|ZP_04731084.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID1] gi|268602708|ref|ZP_06136875.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID1] gi|268586839|gb|EEZ51515.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID1] Length = 687 Score = 545 bits (1403), Expect = e-152, Method: Composition-based stats. Identities = 208/710 (29%), Positives = 347/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D + DVY + + + +L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAG-AKIEDLTIVHD-GRQDVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q + + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQT-ENPSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|113866550|ref|YP_725039.1| glycyl-tRNA synthetase subunit beta [Ralstonia eutropha H16] gi|113525326|emb|CAJ91671.1| Glycyl-tRNA synthetase beta subunit [Ralstonia eutropha H16] Length = 707 Score = 545 bits (1403), Expect = e-152, Method: Composition-based stats. Identities = 206/737 (27%), Positives = 350/737 (47%), Gaps = 72/737 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLYLK 57 M D L+E+++EE+P + + + + L L E ++ + + TP RL + Sbjct: 5 MTDSLLIELFTEELPPKALARLGDAFAQGLFAGLGERDLLEPGATVTPFATPRRLAALVS 64 Query: 58 GLSPHSPEKIE-ERLGP------RVGAGKKAIDGFLR----STGLQTISDCQIKK-DPKK 105 G+ +P++ + E++ P G + L S G+ I +++ K Sbjct: 65 GVRRSAPDREQREKVLPLSVALDANGEPTAPLAKKLAALAKSVGVAEIDWQSLERASDGK 124 Query: 106 GDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCI 165 + + + ++ + I K+P PK M + S ++RP S++ + Sbjct: 125 AEAFFYRYTARGAELAAAVQAALEDTIAKLPIPKVMSYQRPDG--STVHFVRPAHSLIAL 182 Query: 166 LVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEA-MVLLDPECR 224 AE I+ + L + N+T GHRF + I++ + Y + LE A V+ R Sbjct: 183 FGAE-----ILPVTLLGLQASNLTQGHRFLSHGVIEIAHANDYAQRLESAGHVVASYAER 237 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 R + + A A +++ + LL+E+ LVEW V+ F++ +L +P+E + LT++ Sbjct: 238 RERMRAALLKEAGAD--QVIMPESLLDEVNSLVEWPVVYACHFEEAFLAVPQECLILTMQ 295 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 TNQK F +G L N F++VSN+ A++ +I+ GN RVV RL DA F+ +D+ Sbjct: 296 TNQKYFALTDADGHLRNRFLIVSNL-ATETPQSIITGNERVVRPRLADAKFFFDQDR--- 351 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 K L R+ +L VV+H KIGTQ +RV R++ + IA + Sbjct: 352 -----------------KKTLASRVPQL--ASVVYHNKIGTQLDRVQRLQQIAGHIADAL 392 Query: 405 DA-----DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 + D A R L+KADL T++V EFPELQG +G YA +E A EH Sbjct: 393 NGSGVPTDKAAAMRGAELAKADLLTDMVGEFPELQGTMGTYYARHDDEAEDVALACSEHY 452 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 +PR + +P +S V+LADKL+TL+ W I +P+G KDP+ALRR LGI+R+++E Sbjct: 453 RPRFAGDALPAGAVSTAVALADKLETLVGIWGIGLQPTGEKDPFALRRHALGILRMLIEK 512 Query: 520 KIDIPLSQF---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + + LS + F +DR++ YL D+ + +EA++ Sbjct: 513 PLALSLSSLLALTQQAFAGIAAVKPAPDAIADFLYDRVRGYLKDKGYTTNEVEAVVSLRP 572 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 D L I+ ++ + F + + E + KRI IL KN E + P EAE Sbjct: 573 DQLHDILGRMEAVRTFAALPEAEALAAANKRITNILR----KNTEPVGAVDPALFREEAE 628 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+A I ++ + + L + + ++ FF+ V+V +D ++R NRL+L Sbjct: 629 GALHAAIERVRPAVEAAFASGDFTAALRDLAQLRDAVDRFFNDVMVMAEDAQLRANRLAL 688 Query: 685 LQYIKNIILIVINVQKI 701 L + + V ++ K+ Sbjct: 689 LASLHAMANRVADISKL 705 >gi|240112074|ref|ZP_04726564.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae MS11] gi|268598133|ref|ZP_06132300.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae MS11] gi|268582264|gb|EEZ46940.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae MS11] Length = 687 Score = 545 bits (1403), Expect = e-152, Method: Composition-based stats. Identities = 209/710 (29%), Positives = 347/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D + DVY + + + +L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAG-AKIEDLTIVHD-GRQDVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 NIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|194100114|ref|YP_002003254.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae NCCP11945] gi|238690173|sp|B4RJG3|SYGB_NEIG2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|193935404|gb|ACF31228.1| glycyl-tRNA synthetase beta subunit [Neisseria gonorrhoeae NCCP11945] Length = 687 Score = 545 bits (1403), Expect = e-152, Method: Composition-based stats. Identities = 208/710 (29%), Positives = 343/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I + DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAKIEDLTIIH--DGRQDVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAMPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|227890106|ref|ZP_04007911.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii ATCC 33200] gi|227849550|gb|EEJ59636.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii ATCC 33200] Length = 690 Score = 545 bits (1403), Expect = e-152, Method: Composition-based stats. Identities = 202/732 (27%), Positives = 346/732 (47%), Gaps = 77/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSKSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF+R G+ T I + KG Y V + Sbjct: 63 KQEDIDEVKKGPAKKIAQDKDGNWTKAAQGFVRGQGMTTDD---IYFEELKGTEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K + D+L + ++ + +P MRW + F ++RP+ ++ +L +E Sbjct: 120 QKEGKKASDILMGM-SDIVKAMTFPTKMRWGSYD-----FEFVRPIHWMVSLLDSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + L ++ G T GHRF + + + D Y L+ V+ + + R+ ILN Sbjct: 170 -VVPVKLLDVVAGRKTQGHRFLG-DSVVLANADDYEEALKSQYVIANADERKGMILNQIQ 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 228 ELVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N FI V N S+ ++ GN +V+ ARL+DA F+ D+ Sbjct: 288 DENGKLINHFISVRNG-NSEYLDNVIAGNEKVLVARLDDAQFFYDEDK------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVAL 410 PL + +L +V FH KIG+ E ++R++++G + + + ++ Sbjct: 335 --------KYPLAHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNVSDIEMKD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P +P+ Sbjct: 385 FDRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLIGEDENVSVAIKESYMPTSAEGELPS 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ Sbjct: 445 TTVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPIKDVLP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F DR+K L +D+I+A+L + + I Sbjct: 505 ELIQLLSDKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L A + + S RI IL + +N + +I +E+ LYA Sbjct: 565 LAAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRN---ANDIDENLFQDVSEEELYAG 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ + S+ + + I +F+ ++ D +V++NRL+ L + N Sbjct: 622 VNALEENTDLSIAD-----LYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKVNN 676 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 677 LADRMGDLSKLV 688 >gi|260441366|ref|ZP_05795182.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae DGI2] gi|291044723|ref|ZP_06570432.1| glycyl-tRNA synthetase beta subunit [Neisseria gonorrhoeae DGI2] gi|291011617|gb|EFE03613.1| glycyl-tRNA synthetase beta subunit [Neisseria gonorrhoeae DGI2] Length = 687 Score = 545 bits (1403), Expect = e-152, Method: Composition-based stats. Identities = 208/710 (29%), Positives = 345/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I + DVY + + + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAKIEDLTIIH--DGRQDVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|47095409|ref|ZP_00233019.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|254898376|ref|ZP_05258300.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes J0161] gi|254912132|ref|ZP_05262144.1| glycyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254936460|ref|ZP_05268157.1| glycyl-tRNA synthetase [Listeria monocytogenes F6900] gi|47016230|gb|EAL07153.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|258609052|gb|EEW21660.1| glycyl-tRNA synthetase [Listeria monocytogenes F6900] gi|293590103|gb|EFF98437.1| glycyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 688 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 200/731 (27%), Positives = 337/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEAM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + +D K + Sbjct: 61 AEEQANRVEESKGPAKKIALDEEGNWSKAALGFAKSQKVDPAD--LTFRDIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + + +P SM W + +IRP+K ++ + Sbjct: 119 KEVIGEKTSALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF ++ Y L E V+++ E R+ AI+ Sbjct: 168 EEIIPFEITGVATSNTSRGHRFLG-KSATIKQPSDYPNALLEQFVVVNAEERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++E L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEDELLPHFVTVRNG-NHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 --------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----- 524 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N +IP Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWNIPMLEVI 503 Query: 525 --------------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 L + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LNE + + + R+ +I E +E+ P E E+ L+ Sbjct: 564 IDRAQILNEHAEAEWFRPTIEALSRVVKIAKKYEDG-----VEVDPALFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDYAGLTIIER----LKAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|240122659|ref|ZP_04735615.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID332] gi|268681258|ref|ZP_06148120.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID332] gi|268621542|gb|EEZ53942.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID332] Length = 687 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 208/710 (29%), Positives = 345/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I + DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAKIEDLTIIH--DGRQDVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q + + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQT-ENPSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + +L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRSLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|239998102|ref|ZP_04718026.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 35/02] gi|268593954|ref|ZP_06128121.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 35/02] gi|268547343|gb|EEZ42761.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 35/02] Length = 687 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 207/710 (29%), Positives = 344/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I + DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAKIEDLTIIH--DGRQDVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + + +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q + + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQT-ENPSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADIALL 685 >gi|91781832|ref|YP_557038.1| glycyl-tRNA synthetase subunit beta [Burkholderia xenovorans LB400] gi|91685786|gb|ABE28986.1| glycyl-tRNA synthetase beta chain [Burkholderia xenovorans LB400] Length = 699 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 206/714 (28%), Positives = 340/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L ++ + +Y TP RL + +K + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLVEGELSFERYATPRRLAVTIKNVRAVAPEKHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P + G + L + G S +++ K + + P + + Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFSVNDLERAQDGKAEAFFLRYAAPGATLAEG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L++ + + ++P PK M + + ++RP ++ + E+I+ + I Sbjct: 139 LQSALDETLARLPIPKVMTYQRPDG--TNVQFVRPAHRLIAL-----HGEQIVPVSALGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 + T GHRF + +++Q D Y L + V+ + R+ I LA A G + Sbjct: 192 DADDTTLGHRFLSEGFVQIQHADSYAETLLHKGRVVANFSDRKETIRTHL--LAQANGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYACRFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ S G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETSTPGD-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 K L R+ L +VV+H K+G+ +RV R+ L IA LI ADVAL RA L+KADL Sbjct: 349 KTLADRVPLL--ANVVYHNKLGSALQRVERVEALAGAIAGLIGADVALAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +P V+LADK Sbjct: 407 ITDMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPATATGTVVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+TL+ W I +P+G KDP+ALRR LG++RI++E ++ + + Sbjct: 467 LETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLPVDFVELLRNAYAQFAAVPNV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 Q + F DRL+ L +R I+A+L L IV + + EF S A+ Sbjct: 527 VDSTQAIYEFSMDRLRGLLRERGYAPGEIDAVLALNPTRLDDIVARLDAVREFASLAEAA 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + L+ AEK L+A + +Q + + Y Sbjct: 587 SLAAANKRISNILK---KSEGAATGGVQVTLLVEAAEKALHAQLEQVAPRVQSQLAARDY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 644 TGALTALAALREPVDTFFNDVMVNAEDPALRANRLALLGALHQQMNCVADISRL 697 >gi|59802450|ref|YP_209162.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA 1090] gi|81311133|sp|Q5F4Y7|SYGB_NEIG1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|59719345|gb|AAW90750.1| putative glycyl-tRNA synthetase beta subunit [Neisseria gonorrhoeae FA 1090] Length = 687 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 209/710 (29%), Positives = 346/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G I D I D + DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAG-AKIEDLTIVHD-GRQDVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 NIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADIALL 685 >gi|284051092|ref|ZP_06381302.1| glycyl-tRNA synthetase subunit beta [Arthrospira platensis str. Paraca] gi|291571664|dbj|BAI93936.1| glycyl-tRNA synthetase beta chain [Arthrospira platensis NIES-39] Length = 713 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 204/717 (28%), Positives = 342/717 (47%), Gaps = 71/717 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A ++ LKE+ + ++++ Y TP RL + + GL Sbjct: 1 MPSFLLEVGTEELPATFVEGAIAQWEAMIPASLKEQYLTCESVKVYATPRRLAVVIAGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G KA +GF + ++ + KGD + Sbjct: 61 EQQPDRQEEIKGPPATAAFKEGKPTKAAEGFAKKQNIKLEDIEI--RPTPKGDFVFVLKH 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R +++ ++ I ++ + MRW + RP++ ++ +L E Sbjct: 119 IPGRKTAEIVTELIRQWINRLEGKRFMRWGDGD-----IRFPRPIRWLVTLLDKEIL-PL 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I + I + GHR P+ + + Y L +A V +DP+ R+ AI N Sbjct: 173 SIPNGSETISSDRHSQGHRVLHPNSVSIAEATEYAETLGKAFVEVDPQTRKTAIANQVKV 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A++VG E +DLL E++ LVEW +G+FD ++L LP E+I++ + T+Q+ F Sbjct: 233 AANSVGGEAEIPEDLLNEVVNLVEWPTAVVGTFDGEFLVLPPEVIKMVMVTHQRYFPVLD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI +SN + A I GN RV+ ARL D F+K D Sbjct: 293 TQGNLKPYFITISNGDPAKA-AIIASGNERVIRARLADGEFFYKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVALV 411 L KPL+ + L+ +V F +G+ ++V+RI +IA+ + + ++A + Sbjct: 338 ------LKKPLENYLPDLE--NVTFQEDLGSVRDKVNRIIANADRIAKQLKVSEGELAQI 389 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L KADL +++V EFPEL+G +G++YA+ E+ AI EH P+G + +PTN Sbjct: 390 KRAALLCKADLVSQMVYEFPELEGIMGEKYALAGGESEGVAKAIVEHYLPKGASDRLPTN 449 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V+LADKLDTL++ + + P+GS DP+ALRRA G++ II + + L + ++D Sbjct: 450 IISQVVALADKLDTLVSIFGLGMLPTGSSDPFALRRAANGVLNIIWSADLPLNLHELLKD 509 Query: 532 -----------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPEN--------D 565 +L FF R++ L D + I +DL+ A+L E+ Sbjct: 510 LTTDFVNSHPNAMLGLIHHLEDFFLQRIRTLLQDEKSIDYDLVNAVLGDEDIEYKERALQ 569 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLEISPQYLLLEA 623 +LL + D L E + + R ++ + E+ I+P + Sbjct: 570 DLLDVRDRALFLQEIRGDGTLDIIYETINRSTRLAKQGDLDTGELQPDTVINPSLFEKSS 629 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREV 677 E+ L + + + Q +++ + Y Q+ L +I + FFD VLV + +V Sbjct: 630 EQALMEALENLIPNTQAALETRNYRQLVTALAAIVPTVTQFFDGENSVLVMDSNPKV 686 >gi|254827746|ref|ZP_05232433.1| glycyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|254829783|ref|ZP_05234438.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes 10403S] gi|258600125|gb|EEW13450.1| glycyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] Length = 688 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 200/731 (27%), Positives = 337/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAQYVSSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEAM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + +D K + Sbjct: 61 AEEQANRVEEAKGPAKKIALDEEGNWSKAALGFAKSQKVDPAD--LTFRDIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + + +P SM W + +IRP+K ++ + Sbjct: 119 KEVIGEKTSALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF ++ Y L E V+++ E R+ AI+ Sbjct: 168 EEIIPFEITGVATSNTSRGHRFLG-KSATIKQPSDYPNALLEQFVVVNAEERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++E L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEDELLPHFVTVRNG-NHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 --------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----- 524 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N +IP Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWNIPMLEVI 503 Query: 525 --------------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 L + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LNE + + + R+ +I E +E+ P E E+ L+ Sbjct: 564 IDRAQILNEHAEAEWFRPTIEALSRVVKIAKKYEDG-----VEVDPALFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDYAGLTIIER----LKAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|300705117|ref|YP_003746720.1| glycine tRNA synthetase subunit beta [Ralstonia solanacearum CFBP2957] gi|299072781|emb|CBJ44136.1| glycine tRNA synthetase, beta subunit [Ralstonia solanacearum CFBP2957] Length = 697 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 207/720 (28%), Positives = 349/720 (48%), Gaps = 70/720 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G+ +P++ E+ Sbjct: 14 PPKALARLGEAFAQSLFDGLSAQGLLEEGAQVEGFATPRRLAAAIAGVRRTAPDRELREK 73 Query: 71 LGPRVGAGKKAIDGFLR------------STGLQTISDCQIKKDP-KKGDVYLAVLRKPK 117 + P A +G S G+++I+ +++ P K + Sbjct: 74 VLPVNIAFD--AEGKPAAPLLKKLAALAKSVGVESIAPETLERAPDGKAESLFYRYTARG 131 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 ++ D L+ + I +P PK M + + ++RP ++ +L +++I Sbjct: 132 AVLADGLQAALTQTIAGLPIPKVMTYQRPSG--DSVQFVRPAHRLIALL-----DDEVIP 184 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLA 236 + + GN+T GHRF + I + Y L+ V+ R+ AI + + A Sbjct: 185 ARVLGLQSGNVTLGHRFLSAGEIVIPHATAYAGTLKSQGKVIAGYAERKEAIRAELLKAA 244 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 A +V + LL+E+ LVEW ++ F++++L +P+E + LT++TNQK F + Sbjct: 245 GAD--TVVMPEALLDEVNALVEWPVIYPCHFEEQFLEVPQECLILTMQTNQKYFALTDAQ 302 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L N F++VSN+ A+D AI++GN RVV RL DA F++ D+ Sbjct: 303 GHLRNRFLIVSNL-ATDTPQAIIEGNERVVRPRLADARFFFEHDK--------------- 346 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 KPL R+ L VV+H KIGTQ ERVSR++ + ++A + ADVA RA + Sbjct: 347 -----KKPLADRVPLLSR--VVYHNKIGTQLERVSRLQAIAGQLADKLGADVAHASRAAL 399 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL T++V EFPELQG +G YA E A EH +PR + +P Sbjct: 400 LAKADLLTDMVGEFPELQGTMGTYYARHDGEAADVALACSEHYQPRFAGDALPGTATGTV 459 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------- 528 V+LADKL+TL+ W I P+G KDP+ALRR LGI+R+++E + + +++ Sbjct: 460 VALADKLETLVGIWGIGLAPTGEKDPFALRRHALGILRMLIEKPLALGIAEVLEVAAASF 519 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F +DRL+ YL D+ + +EA++ L IV ++ + F Sbjct: 520 EGIAAVKPDPAAITDFLYDRLRSYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFA 579 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + E + KRI IL KK + PQ L +AE+ L+ ++ H+ ++ Sbjct: 580 ALPQAEALAAANKRITNIL----KKTDIAIGSVQPQLLKEDAERALHQAVATSEPHVHDA 635 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L + E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 636 FARGDFTTALKTLAGLREAVDSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKL 695 >gi|284801845|ref|YP_003413710.1| hypothetical protein LM5578_1600 [Listeria monocytogenes 08-5578] gi|284994987|ref|YP_003416755.1| hypothetical protein LM5923_1552 [Listeria monocytogenes 08-5923] gi|284057407|gb|ADB68348.1| hypothetical protein LM5578_1600 [Listeria monocytogenes 08-5578] gi|284060454|gb|ADB71393.1| hypothetical protein LM5923_1552 [Listeria monocytogenes 08-5923] Length = 688 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 200/731 (27%), Positives = 337/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAQYVSSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEAM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + +D K + Sbjct: 61 AEEQANRVEEAKGPAKKIALDEEGNWSKAALGFAKSQKVDPAD--LTFRDIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + + +P SM W + +IRP+K ++ + Sbjct: 119 KEVIGEKTSALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF ++ Y L E V+++ E R+ AI+ Sbjct: 168 EEIIPFEITGVATSNTSRGHRFLG-KSATIKQPSDYPNALLEQFVVVNAEERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++E L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEDELLPHFVTVRNG-NHENLNTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 --------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----- 524 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N +IP Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWNIPMLEVI 503 Query: 525 --------------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 L + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LNE + + + R+ +I E +E+ P E E+ L+ Sbjct: 564 IDRAQILNEHAEAEWFRPTIEALSRVVKIAKKYEDG-----VEVDPALFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDYAGLTIIER----LKAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|240124847|ref|ZP_04737733.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-92-679] gi|268683428|ref|ZP_06150290.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-92-679] gi|268623712|gb|EEZ56112.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-92-679] Length = 687 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 205/710 (28%), Positives = 344/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I + DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAKIEDLTIIH--DGRQDVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + + +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAE----LGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADIALL 685 >gi|81428491|ref|YP_395491.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus sakei subsp. sakei 23K] gi|123728652|sp|Q38X99|SYGB_LACSS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|78610133|emb|CAI55182.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus sakei subsp. sakei 23K] Length = 693 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 204/731 (27%), Positives = 341/731 (46%), Gaps = 76/731 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI EE+PA + + + L + L+E+ + + ++ Y TP RL + ++ L+ Sbjct: 5 FLLEIGLEEMPAHVVMPSIQQLEKRVRDFLEEQHLEFGQLKTYATPRRLAILIEDLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + EE GP G KA GF+R GL T K+ K + Sbjct: 65 ADIHEEAKGPAKKIALDAEGNWSKAAQGFVRGQGLTTDD--ITFKELKGVEYVYVEKSII 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +E +L + I + +P M W+ F +IRP+ I+ +L +++I Sbjct: 123 GKPVEAILPE-LKAVIMAMTFPTRMHWADYD-----FEYIRPIHWIIALL-----DDEVI 171 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D + + G T GHRF + + Y LE V+ D R+N I ++A Sbjct: 172 DFSILNVTTGRTTQGHRFLG-QEVTLAKATDYEAALEAQFVIADEAKRQNLIQTQIEKMA 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++ D +LLEE+ LVEW F G FD KYL +PEE++ ++K NQ+ F R++ Sbjct: 231 QENDWQVDLDANLLEEVTNLVEWPTAFYGQFDAKYLEIPEEVLITSMKDNQRYFYARSQA 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V N ++ GN +V+ ARLEDA F+ DQ Sbjct: 291 GDLLPVFIGVRNG-NDAFMENVIAGNEKVLTARLEDADFFYHEDQ--------------- 334 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDR 413 + + +A+L +V FH KIG+ E+++R+ ++ + + Q A++ + R Sbjct: 335 -----KVTIAENVAKLQ--NVSFHDKIGSLAEKMTRVGLIAQFLGQKFGLSEAELVDLQR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A + K DL T +V EF ELQG +G++YA+LQ E + A+ EH P +P K+ Sbjct: 388 ASDIYKFDLVTGMVGEFAELQGVMGEKYALLQGETPAVATAVREHYMPISAEGALPATKV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 +++ADK D++ +F+A+ PSGS DPYALRR GI+RI+ P++ F + Sbjct: 448 GAVLAIADKFDSMADFFAVGMIPSGSNDPYALRRQAYGIVRILENQDWHFPMADFQAAMS 507 Query: 534 -------------------LILFFHDRLKLYLHDR--DIRHDLIEAILRPENDNLLTIVD 572 + F DR++ + +R D+++A+L+ + + + + + Sbjct: 508 HIVKQQADFDLDWSANAAAISDFLTDRVRQRFNGMRPKVRRDIVDAVLKNQGQDPVVMFE 567 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE-ISLEISPQYLLLEAEKRLYAVI 631 K L+ A + + + R+ L + EK + E L + P +AEK LY + Sbjct: 568 AAKVLSAHQDDADFKATIEAITRV---LRLAEKVDFETTDLTVDPALFENDAEKALYTAV 624 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 D + + Y L ++ IE +FD +V +D VR NRL+ L I I Sbjct: 625 EDLRGATATNTLAENY----AALQTLRPLIEAYFDATMVMAEDEAVRRNRLTQLMIIAQI 680 Query: 692 ILIVINVQKIV 702 L + ++ +++ Sbjct: 681 ALSLGDLNELI 691 >gi|117918475|ref|YP_867667.1| glycyl-tRNA synthetase subunit beta [Shewanella sp. ANA-3] gi|166227928|sp|A0KR42|SYGB_SHESA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|117610807|gb|ABK46261.1| glycyl-tRNA synthetase, beta subunit [Shewanella sp. ANA-3] Length = 688 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 214/722 (29%), Positives = 346/722 (47%), Gaps = 62/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + +++ Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKIVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVDQAERLVTD--KGEWLVYNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW ++ + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGSSKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ D+Y+ L+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARNVRGHRFMGTG-FELDHADNYLTLLKEKGKVIADYESRKALIKADAEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 232 AAAKIGGTADIEDDLLEEVTSLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ Sbjct: 292 DAGKLLPNFIFVANIESKD-PAQIIAGNEKVVRPRLADAEFFFNTDK------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 338 -------KHTLESRLPSLET--VLFQQQLGTLKDKVTRISALAAFIAEQTGANAVDAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VPT +S Sbjct: 389 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVALAMEEQYKPKFSGDTVPTAAVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L Sbjct: 449 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 508 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + D+ I D+I A+L I ++ Sbjct: 509 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIEVDVILAVLARRPTRPADFDSRINAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K E+ I+ L AE+ L A +++ + Sbjct: 569 FRSLEASSALAAANKRVSNILA---KVEGELPTTINSALLAEAAEQALAAKLAELQPQLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL S+ E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 626 PLFANADYQQALTLLASLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|163791425|ref|ZP_02185834.1| glycyl-tRNA synthetase, beta subunit [Carnobacterium sp. AT7] gi|159873289|gb|EDP67384.1| glycyl-tRNA synthetase, beta subunit [Carnobacterium sp. AT7] Length = 694 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 202/731 (27%), Positives = 334/731 (45%), Gaps = 71/731 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + LLEI EEIPA + +++ L + LKE + + + + TP RL + +K ++ Sbjct: 3 KNLLLEIGLEEIPAHIVTPSSQQLVQKITAFLKENRLEHGEVIPFSTPRRLAVIVKDIAE 62 Query: 62 HSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E GP G KA GF R G T K K D Sbjct: 63 KQEDVQESVKGPAQKIAQDAEGNWSKAAIGFARGQGATTDD--IYFKSIKDVDYVYVDKF 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + ++L + I + +P SM W+ F +IRP + +L ++ Sbjct: 121 ISGKTVNEILVG-LDKVITSLTFPVSMHWADH-----TFKYIRPFHWLTAML-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I +L +I N + GHRF + Y LE V+ D R+ I+N Sbjct: 170 VIPFELLDIQTANTSRGHRFLGHD-VTFADALAYEETLESVFVIADSTKRKQMIVNQIEE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L A + D++LLEE+ L+E+ F GSFD+KYL LPEE++ ++K +Q+ F R Sbjct: 229 LVKANQWSVSMDEELLEEVNNLIEYPTAFYGSFDQKYLNLPEEVLITSMKDHQRYFGVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG + FI V N A + + +GN +V+ ARL+D F++ DQ Sbjct: 289 SEGAVLPYFISVRNGNA-NHIETVARGNEKVLTARLDDGQFFFEEDQKL----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LV 411 + + RL V FH KIG+ E+++R++ + + I + + + + Sbjct: 337 ---------TIAACVERLKQ--VTFHEKIGSIYEKMNRVQAIAQLIGKQVGLNETELTDL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA + K DL T +V EFPELQG +G++YA+ Q E + AI EH P +P Sbjct: 386 KRASEIYKFDLVTNMVGEFPELQGIMGEKYALTQGETPAVAAAIREHYMPVSSEGELPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 + +++ADKL+++++F+A+ P+GS DPYALRR T GI+RII + P+ E Sbjct: 446 SVGAVLAIADKLESVLSFFAVGMTPTGSNDPYALRRQTYGIVRIIESKNWNFPMESLKEA 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++ F R++ L IRHD+I+A L ++LL +V Sbjct: 506 ILSTSVIAQSALFEGYKSSTAEVVDFIKARIRQLLLAESIRHDVIDAALNSRQEDLLKLV 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + + +N S + + + R+ + E + L + P +E+ LY Sbjct: 566 EAGRIINSHLSDTIFKPTIEALTRVVNLANKGEAMLDQDQLSVDPALFETNSEQELYEAF 625 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + ++ Q + IE FF++ +V D++ VR+NRL+LL I + Sbjct: 626 VEIEKTVN----NENSKQSYTSFEQLQPLIEAFFNENMVMADNQAVRNNRLALLMKISSF 681 Query: 692 ILIVINVQKIV 702 +L +V K+V Sbjct: 682 VLSFASVDKLV 692 >gi|116333401|ref|YP_794928.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus brevis ATCC 367] gi|122269912|sp|Q03SC5|SYGB_LACBA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116098748|gb|ABJ63897.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus brevis ATCC 367] Length = 691 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 336/733 (45%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M FLLEI EE+PA + A + L LKEE V Y ++ + TP RL + + GL Sbjct: 1 MAHTFLLEIGLEEMPAHVVTPAIKQLVKRTADYLKEERVDYDEIKPFSTPRRLAVLITGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP G KA GF R GL T K+ K + Sbjct: 61 ADKQRDISESVKGPAKKIAQDAEGNWSKAAIGFTRGQGLTTDD--ITFKEIKGTEYVYVD 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + VL + I + +P M+WST H F +IRP++ ++ +L A+ Sbjct: 119 KFIAGEPVATVLAG-LKDVITAMTFPTMMKWSTHH-----FQYIRPIRWLVALLDAD--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + ++ T GHRF I + + Y DL V+ D + R++ I Sbjct: 170 --VIPFSILDVTTDRNTRGHRFLG-KDISIATAADYEGDLTSEFVIADADKRKSMIKTQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +LA+ G + D LLEE+ LVEW F GSFD+KYL +PEE++ +++ +Q+ F Sbjct: 227 DKLAADHGWTVNVDAGLLEEVNNLVEWPTAFAGSFDEKYLTIPEEVLITSMRDHQRFFYA 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G L FI V N D +V GN +V+ ARLEDA+ F+ DQ Sbjct: 287 RDAQGQLLPTFISVRNGNDHD-LQNVVSGNEKVLTARLEDAMFFYTEDQ----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 K + + RL V FH KI T E++SR++ + +A+ + + A Sbjct: 335 ---------KKTIADYVERLKT--VSFHDKISTMAEKMSRVKAIAGVLAKHVGLNDAQTK 383 Query: 413 ---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA + K DL T +V EF ELQG +G++YA+LQ E+ + AI EH +P +P Sbjct: 384 AVLRASEIYKFDLVTGMVGEFAELQGVMGEKYALLQGEDPAVAQAIREHYEPISADGALP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----- 524 + ++LADK D+++ F+A PSGS DPYALRR GI+RI + + +P Sbjct: 444 ASVPGAVLALADKFDSILTFFAAGMIPSGSNDPYALRRQATGIVRIAQDQQWSLPVADLA 503 Query: 525 ---------------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 L Q + L+ F DR++ L RHD+I+A+ + ++L Sbjct: 504 QAFVAAETTANVAPKLDQAGQIDALVNFIKDRIRKILRSAKQRHDIIDAVTAGSSSDVLQ 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I L A + + S R+ ++ + + P ++E +L+ Sbjct: 564 IFTAADILASHADDANFKDVIESLTRVIRLAQKAP--AEVAATTVDPALFENDSEGQLHQ 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++ T ++ + + L I I +FD +V D VR+NRL+ L + Sbjct: 622 GVATVATAAKDGL-----TALYTALADIQPVIAAYFDATMVMAKDDAVRNNRLAELSRLA 676 Query: 690 NIILIVINVQKIV 702 ++ L + ++ ++V Sbjct: 677 DLALALGDLDQLV 689 >gi|184155319|ref|YP_001843659.1| glycyl-tRNA synthetase subunit beta [Lactobacillus fermentum IFO 3956] gi|238692973|sp|B2GBZ7|SYGB_LACF3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|183226663|dbj|BAG27179.1| glycyl-tRNA synthase beta subunit [Lactobacillus fermentum IFO 3956] Length = 692 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 195/734 (26%), Positives = 340/734 (46%), Gaps = 76/734 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +LLE+ EE+PA + + + L + L EE + +++++ Y TP RL L + GL Sbjct: 1 MAHSYLLEVGLEEMPAHVVTPSIQQLKTRVANYLTEERIDFEDIQAYSTPRRLALLISGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ E GP G KA GF R G I+ KG Y+ V Sbjct: 61 ADKQPDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQGATVDD---IEFKEVKGVEYVYV 117 Query: 113 -LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +VL + I + +P MRW + ++IRP+ ++ +L Sbjct: 118 EKHIQGKPVAEVLAG-LNDVITAMNFPTLMRWGSFK-----LNFIRPIHWLVSLL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ D+ + G +T GHRF ++++S Y+ L++ V++D R+ I + Sbjct: 167 DDQVVPFDILNVTAGRLTRGHRFLGHD-VEIKSATDYVAALKDDFVIVDAAERKATIKDQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + D++LLEE+ LVEW F G+FD+KYL LPE ++ ++K NQ+ F Sbjct: 226 IQAIVDQHNWVIDWDEELLEEVNNLVEWPTAFAGTFDQKYLELPEPVLITSMKDNQRFFC 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R +G L FI V N A ++GN RV+ RLEDA F+ DQ Sbjct: 286 VRDHDGKLQPAFISVRNGNAVHLDNV-IKGNERVLVPRLEDAKFFFDEDQ---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DV 408 +DQ + RL +V FH +I + ++++R + L + Q + ++ Sbjct: 335 ----------KMTIDQYVDRLK--NVSFHDQISSMYDKMARTKALANLLGQQLGLSDQEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A + RA + K DL T++V EF ELQG +G+ YA EN + A+ EH P + Sbjct: 383 ADLARAASIYKFDLTTQMVGEFAELQGIMGEIYAKRFGENEAVAAAVREHYMPISADGAL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKLD++ +F+A++ PSGS DPYALRR GI+R++ + K + L F Sbjct: 443 PQTTVGTVLAIADKLDSIYSFFAVDMIPSGSNDPYALRRQAYGIVRMLADRKWHLNLLDF 502 Query: 529 IED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + FF DRLK +RHD+++A+ + Sbjct: 503 QASAKQAVEQATPALGLDYAKNADAVTDFFIDRLKQLFSLDHLRHDIVDAVTDTHVTDPA 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 IV+ L+ A + + + R+ ++ A ++ ++ P +E +L Sbjct: 563 AIVEAAHVLDAHKDDADLKDQVEALTRVIRLAAKGNLSEDDV--KVDPSLFENPSEGQLD 620 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++ + + Q L + I ++F++ ++ D V++NRLSLL + Sbjct: 621 QAVQAL----IDAKEGRSLDQQFSALLELEPVISLYFEENMIMDKDEAVKNNRLSLLTIL 676 Query: 689 KNIILIVINVQKIV 702 + N+ +++ Sbjct: 677 ADQTAAFGNLDQLI 690 >gi|114045521|ref|YP_736071.1| glycyl-tRNA synthetase subunit beta [Shewanella sp. MR-7] gi|122945101|sp|Q0I0U1|SYGB_SHESR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|113886963|gb|ABI41014.1| glycyl-tRNA synthetase, beta subunit [Shewanella sp. MR-7] Length = 688 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 214/722 (29%), Positives = 346/722 (47%), Gaps = 62/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + +++ Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAAWYAAPRRLAINVTELAIA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKIVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVDQAERLVTD--KGEWLVYNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW ++ + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGSSKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ D+Y+ L+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARNVRGHRFMGTG-FELDHADNYLTLLKEKGKVIADYESRKALIKADAEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 232 AAAKIGGTADIEDDLLEEVTSLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ Sbjct: 292 EAGKLLPNFIFVANIESKD-PAQIIAGNEKVVRPRLADAEFFFNTDK------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 338 -------KHTLESRLPSLET--VLFQQQLGTLKDKVTRISALAAFIAEQTGANAVDAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VPT +S Sbjct: 389 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVALAMEEQYKPKFSGDTVPTAAVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L Sbjct: 449 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 508 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + D+ I D+I A+L I ++ Sbjct: 509 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIDVDVILAVLARRPTRPADFDSRINAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K E+ I+ L AE+ L A +++ + Sbjct: 569 FRSLEASSALAAANKRVSNILA---KVEGELPTAINSALLAEAAEQALAAKLAELQPQLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL S+ E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 626 PLFANADYQQALTLLSSLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|113968354|ref|YP_732147.1| glycyl-tRNA synthetase subunit beta [Shewanella sp. MR-4] gi|122944262|sp|Q0HPC7|SYGB_SHESM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|113883038|gb|ABI37090.1| glycyl-tRNA synthetase, beta subunit [Shewanella sp. MR-4] Length = 688 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 214/722 (29%), Positives = 346/722 (47%), Gaps = 62/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + +++ Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAVWYAAPRRLAINVTELAIA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKIVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVDQAERLVTD--KGEWLVYNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW ++ + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGSSKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ D+Y+ L+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARNVRGHRFMGTG-FELDHADNYLTLLKEKGKVIADYESRKALIKADAEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 232 AAAKIGGTADIEDDLLEEVTSLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ Sbjct: 292 EAGKLLPNFIFVANIESKD-PAQIIAGNEKVVRPRLADAEFFFNTDK------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 338 -------KHTLESRLPSLET--VLFQQQLGTLKDKVTRISALAAFIAEQTGANAVDAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VPT +S Sbjct: 389 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVALAMEEQYKPKFSGDTVPTAAVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L Sbjct: 449 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 508 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + D+ I D+I A+L I ++ Sbjct: 509 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIDVDVILAVLARRPTRPADFDSRINAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K E+ I+ L AE+ L A +++ + Sbjct: 569 FRSLEASSALAAANKRVSNILA---KVEGELPTAINSALLAEAAEQALAAKLAELQPQLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL S+ E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 626 PLFANADYQQALTLLSSLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 685 Query: 700 KI 701 + Sbjct: 686 LL 687 >gi|121592958|ref|YP_984854.1| glycine--tRNA ligase [Acidovorax sp. JS42] gi|229470692|sp|A1W3F3|SYGB_ACISJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120605038|gb|ABM40778.1| glycyl-tRNA synthetase beta chain [Acidovorax sp. JS42] Length = 720 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 214/746 (28%), Positives = 349/746 (46%), Gaps = 79/746 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L+ L+ +G+ + + + +P RL ++ + Sbjct: 5 NLLVELFVEELPPKALQKLGDAFAGVLLEQLQAQGLTSAHSQLTAFASPRRLAAHITEVL 64 Query: 61 PHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAV 112 P + +K + ++L P G A+ L + G S Q+K+ K +V Sbjct: 65 PAAADKAVSQKLMPVAVGLDASGQPTPALLKKLTALGADAASVPQLKRVHDGKAEVLFFE 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 L+ D L+ + AI K+P PK MR+ ++ ++RP ++ + + Sbjct: 125 SMAKGALLADGLQKALDEAIAKLPIPKVMRYQLQDG-WTSVHFVRPAHGLVALHGTQVL- 182 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 + + + GN T+GHRF A P+ +QS D Y L V+ RR I Sbjct: 183 ---VGVQALGLTAGNTTHGHRFEASVDPVVIQSADSYAEQLRSEGAVIASFAERRAEIAR 239 Query: 231 DAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A VG +ED LL+E+ LVE V + F+K++L +P+E + LT+K NQK Sbjct: 240 QLQAAADRVGGGVRPIEDAALLDEVTALVERPNVLVCEFEKEFLAVPQECLILTMKANQK 299 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F EG L + F++VSNI D +A++QGN RVV RL DA F+ +D+ Sbjct: 300 YFPLLDAEGKLTHQFLVVSNISPQDA-SAVIQGNERVVRPRLADAKFFFDQDR------- 351 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---- 404 K L R+ +L VV+H K+GTQGERV R+R + K IA + Sbjct: 352 -------------KKTLVSRVDQL--AKVVYHNKLGTQGERVERVRHIAKAIATQLFTAL 396 Query: 405 ----------------DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNEN 448 D + VD A +L+K DL T++V EFPELQG +G YAV Sbjct: 397 AQGNAALDSQEGEIAQDYLLTCVDNAALLAKTDLVTDMVGEFPELQGIMGGYYAVSDGLP 456 Query: 449 ISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRA 508 AIE+H KPR + +P + + V+LADKL+TL+ + I P+G +DP+ALRR Sbjct: 457 DEVAHAIEDHYKPRFAGDALPRENVGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRH 516 Query: 509 TLGIIRIILENKIDIPLSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDL 555 LG+IR+++E ++ + L L F +DRL L ++ Sbjct: 517 ALGVIRMLVEKELPLDLDALLASAVPAFGDKIEDTSAQLADFIYDRLAGSLREQGYSAQE 576 Query: 556 IEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS 615 ++A++ L + ++ + F + + KR+ IL KK E+ ++ Sbjct: 577 VDAVIALRPQRLALVPRQLEAVRAFTQLEEAPALAAANKRVTNIL----KKAGEVDPHVN 632 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 + L AEK LYA + F D Y L + P++ FFD V+VN ++ Sbjct: 633 EELLQEPAEKDLYAALQRFVPEANAQFDSGDYTASLQTLAVLRAPVDAFFDDVMVNAEEL 692 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKI 701 +R NR LL+ + + V ++ ++ Sbjct: 693 ALRLNRQGLLKKLHMAMNRVADLSRL 718 >gi|260662167|ref|ZP_05863063.1| glycyl-tRNA synthetase beta subunit [Lactobacillus fermentum 28-3-CHN] gi|260553550|gb|EEX26442.1| glycyl-tRNA synthetase beta subunit [Lactobacillus fermentum 28-3-CHN] Length = 692 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 195/734 (26%), Positives = 342/734 (46%), Gaps = 76/734 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +LLE+ EE+PA + + + L + L EE + +++++ Y TP RL L + GL Sbjct: 1 MAHSYLLEVGLEEMPAHVVTPSIQQLKTRVANYLTEERIDFEDIQAYSTPRRLALLISGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ E GP G KA GF R G I+ KG Y+ V Sbjct: 61 ADKQPDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQGATVDD---IEFKEVKGVEYVYV 117 Query: 113 -LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +++VL + I + +P MRW + ++IRP+ ++ +L Sbjct: 118 EKHIQGKPVDEVLAG-LNDVITAMNFPTLMRWGSFK-----LNFIRPIHWLVSLL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ D+ + G +T GHRF ++++S Y+ L++ V++D R+ I + Sbjct: 167 DDQVVPFDILNVTAGRLTRGHRFLGHD-VEIKSATDYVAALKDDFVIVDAAERKATIKDQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + D++LLEE+ LVEW F G+FD+KYL LPE ++ ++K NQ+ F Sbjct: 226 IQAIVDQHNWVIDWDEELLEEVNNLVEWPTAFAGTFDQKYLELPEPVLITSMKDNQRFFC 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R +G L FI V N A ++GN RV+ RLEDA F+ DQ Sbjct: 286 VRDHDGKLQPAFISVRNGNAVHLDNV-IKGNERVLVPRLEDAKFFFDEDQ---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DV 408 +DQ + RL +V FH +I + ++++R + L + Q + ++ Sbjct: 335 ----------KMTIDQYVDRLK--NVSFHDQISSMYDKMARTKALANLLGQQLGLSDQEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A + RA + K DL T++V EF ELQG +G+ YA EN + A+ EH P + Sbjct: 383 ADLARAASIYKFDLTTQMVGEFAELQGIMGEIYAKRFGENEAVAAAVREHYMPISADGAL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKLD++ +F+A++ PSGS DPYALRR GI+R++ + K + L F Sbjct: 443 PQTTVGAVLAIADKLDSIYSFFAVDMIPSGSNDPYALRRQAYGIVRMLADRKWHLNLLDF 502 Query: 529 IED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 ++ FF DRLK +RHD+++A+ + Sbjct: 503 QASAKQAVEQATPALGLDYAKNADSVTDFFIDRLKQLFSLDHLRHDIVDAVTDTHVTDPA 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 IV+ L+ A + + + R+ ++ A ++ ++ P +E +L Sbjct: 563 AIVEAAHVLDAHKDDADLKDQVEALTRVIRLAAKGNLSEDDV--KVDPSLFENPSEGQLD 620 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++ + + Q L + I ++F++ ++ D V++NRLSLL + Sbjct: 621 QAVQAL----IDAKEGRSLDQQFSALLELEPVISLYFEENMIMDKDEAVKNNRLSLLTIL 676 Query: 689 KNIILIVINVQKIV 702 + N+ +++ Sbjct: 677 ADQTAAFGNLDQLI 690 >gi|293397822|ref|ZP_06642028.1| glycyl-tRNA synthetase, beta subunit [Neisseria gonorrhoeae F62] gi|291611768|gb|EFF40837.1| glycyl-tRNA synthetase, beta subunit [Neisseria gonorrhoeae F62] Length = 687 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 211/710 (29%), Positives = 348/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G I D I D + DVY + + + +L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAG-AKIEDLTIVHD-GRQDVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P++ + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQKCLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTED-PSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|220904189|ref|YP_002479501.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868488|gb|ACL48823.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 694 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 200/728 (27%), Positives = 327/728 (44%), Gaps = 63/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI SEE+P+R +L L E G+ Y ++R TP R + ++ L+ Sbjct: 1 MATFVLEIGSEELPSRFLAPEEAELFTRFTTALDEAGLEYGSLRVMSTPRRAVVMVENLN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E+ E GP V G KA++GF+R+ G +++ +KG Sbjct: 61 PVQIEREEVISGPPVRVAYDAEGKPTKALEGFVRTNGCALED--VFQQETEKGAYVAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R ++L + P I +P+ K MRW + ++ RPL+ IL +L + Sbjct: 119 RTGGAPASELLAVMCPAIISALPFAKRMRWGNH-----SLAYARPLRWILALL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDA 232 +II ++ + G T GHR H P V L + + LD RR I+ Sbjct: 169 EIISFEVGPMVSGRETCGHRIHGAGPFSVARAAELPAILADSCGITLDSPKRREIIVEGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +R A VG +++ LL+E+ GL E + FD YL +P E++ +++++QK F Sbjct: 229 NRQAQTVGGKVLWKDSLLDEVQGLAEHPVPLLADFDPAYLEVPREVLLTSMESHQKSFGI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V NI D + + +G RV+ ARLEDA FW+ D Sbjct: 289 EGADGRLLPHFLTVLNITPEDM-SIVKRGWERVLRARLEDARFFWQAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 L + D + +LD V+F +G+ G++ R+ L + +A+ D A Sbjct: 336 --------LREGFDHWLQKLD--SVIFIGGLGSMGDKTRRLESLCRWLAEKCAPDLAADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSKADL + +V EF LQG +G YA + E+ + A+ E P GP +P + Sbjct: 386 ARAGRLSKADLVSGLVGEFDTLQGVMGGIYAARKGESAAVAQAVAEQYLPAGPDSPLPGS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +SLADK DTL + + P+G+ DP LRR LGIIRI+L+ + + + + Sbjct: 446 MCGALLSLADKADTLAGCFGLGMIPTGAADPNGLRRCALGIIRIVLDFGLRLDMREVFAR 505 Query: 532 QN------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L+ FF RL+ Y + L++A L + + Sbjct: 506 AQELYGDRQWKLPPAEALDKLMEFFGARLRNYFMSQGQDTLLVDAALGAGAAQVKDCGER 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ L +F A + + KR+ IL + + +I + + L +AEK L A + Sbjct: 566 LEALVDFSREAGFAEAAQTFKRVANILRKQGQAE-DIPAQWQAELLHEDAEKALAATLDG 624 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + + L ++ ++ FFD V+V DD +R NRL++LQ + Sbjct: 625 LLPELDRMWAAREHTAALACLSNVRPAVDAFFDGVMVMCDDAALRRNRLAMLQALGGRFA 684 Query: 694 IVINVQKI 701 + + + Sbjct: 685 RLADFAAL 692 >gi|227514582|ref|ZP_03944631.1| glycine--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|227086993|gb|EEI22305.1| glycine--tRNA ligase [Lactobacillus fermentum ATCC 14931] Length = 692 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 195/734 (26%), Positives = 341/734 (46%), Gaps = 76/734 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +LLE+ EE+PA + + + L + L EE + +++++ Y TP RL L + GL Sbjct: 1 MAHSYLLEVGLEEMPAHVVTPSIQQLKTRVANYLTEERIDFEDIQAYSTPRRLALLISGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ E GP G KA GF R G I+ KG Y+ V Sbjct: 61 ADKQPDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQGATVDD---IEFKEVKGVEYVYV 117 Query: 113 -LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +++VL + I + +P MRW + ++IRP+ ++ +L Sbjct: 118 EKHIQGKPVDEVLAG-LNDVITAMNFPTLMRWGSFK-----LNFIRPIHWLVSLL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ D+ + G +T GHRF ++++S Y+ L++ V++D R+ I + Sbjct: 167 DDQVVPFDILNVTAGRLTRGHRFLGHD-VEIKSATDYVAALKDDFVIVDAAERKATIKDQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + D++LLEE+ LVEW F G+FD+KYL LPE ++ ++K NQ+ F Sbjct: 226 IQAIVDQHNWVIDWDEELLEEVNNLVEWPTAFAGTFDQKYLELPEPVLITSMKDNQRFFC 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R +G L FI V N A ++GN RV+ RLEDA F+ DQ Sbjct: 286 VRDHDGKLQPAFISVRNGNAVHLDNV-IKGNERVLVPRLEDAKFFFDEDQ---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DV 408 +DQ + RL +V FH +I + ++++R + L + Q + ++ Sbjct: 335 ----------KMTIDQYVDRLK--NVSFHDQISSMYDKMARTKALANLLGQQLGLSDQEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A + RA + K DL T++V EF ELQG +G+ YA EN + A+ EH P + Sbjct: 383 ADLARAASIYKFDLTTQMVGEFAELQGIMGEIYAKRFGENEAVAAAVREHYMPISADGAL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKLD++ +F+A++ PSGS DPYALRR GI+R++ + K + L F Sbjct: 443 PQTTVGAVLAIADKLDSIYSFFAVDMIPSGSNDPYALRRQAYGIVRMLADRKWHLNLLDF 502 Query: 529 IED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + FF DRLK +RHD+++A+ + Sbjct: 503 QASAKQAVEQATPALGLDYAKNADAVTDFFIDRLKQLFSLEHLRHDIVDAVTDTHVTDPA 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 IV+ L+ A + + + R+ ++ A ++ ++ P +E +L Sbjct: 563 AIVEAAHVLDAHKDDADLKDQVEALTRVIRLAAKGNLSEDDV--KVDPSLFENPSEGQLD 620 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++ + + Q L + I ++F++ ++ D V++NRLSLL + Sbjct: 621 QAVQAL----IDAKEGRSLDQQFSALLELEPVISLYFEENMIMDKDEAVKNNRLSLLTIL 676 Query: 689 KNIILIVINVQKIV 702 + N+ +++ Sbjct: 677 ADQTAAFGNLDQLI 690 >gi|28198746|ref|NP_779060.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa Temecula1] gi|182681438|ref|YP_001829598.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa M23] gi|32130155|sp|Q87D45|SYGB_XYLFT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238691036|sp|B2I4M9|SYGB_XYLF2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28056837|gb|AAO28709.1| glycyl-tRNA synthetase beta chain [Xylella fastidiosa Temecula1] gi|182631548|gb|ACB92324.1| glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa M23] gi|307579888|gb|ADN63857.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa subsp. fastidiosa GB514] Length = 722 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 198/758 (26%), Positives = 339/758 (44%), Gaps = 95/758 (12%) Query: 1 MPDF---LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + ++ L+ G+ + + TP RL + Sbjct: 1 MTELKPLLIELGTEELPVNALPNLSRAFFEGVLAGLERRGIVVDHGEAKSLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L ++ P++ E GP G KA++GF G+ + +I+ KG+ Sbjct: 61 LTAVAVEQPKQYRELFGPYLNTAFDTEGKPTKALEGFAAKCGVNWRTLERIRDT--KGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ + P + +L I+ AI +P PK MRW + + RP+ ++ + Sbjct: 119 FVHRVVVPGERTDALLPGILTEAIAGMPIPKPMRWGAHE-----YLFARPVHWLVMLFGQ 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + +++ ++ + G I+ GHRF P+ + +YI L+ A VL+DP RR I Sbjct: 174 D-----VVEAEIMGVKAGRISRGHRFLYDKPVSLSGPQNYIDVLQAAYVLVDPAARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + +A VG +D + +++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VAEIEAVARQVGGVARITEDNVAQVVNLVEWPSAVLCSFERVFLEVPQEALIQTMEVNQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI+++D +G RV+ R DA F+ D Sbjct: 289 FFPVLDSLGKLTEKFIGIANIESNDVAEVA-KGYERVIRPRFSDAKFFFNED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L RL V +HAK+GT ++V+R+ VL + IA I D Sbjct: 340 ------------LKQGLKAMGERLRT--VTYHAKLGTLADKVARVLVLAEAIAPQIGVDP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L R +LSK DL + +V EFPELQG G YA++ E AIE+ +PR + + Sbjct: 386 LLARRVALLSKNDLQSRMVNEFPELQGVAGHHYALISGELPEVAMAIEDAYRPRFSGDEI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + + LA++LDTL +A+ KP+G+KDP+ LRR LG+ R I+E++ D+ L Sbjct: 446 ARSPLGKVLGLAERLDTLACGFAVGMKPTGNKDPFGLRRNALGLARTIIESRFDLDLKVL 505 Query: 529 IED---------------------------------------------QNLILFFHDRLK 543 ++ + L F +RL+ Sbjct: 506 LDQASDWVAFATTIEQERHAQESVKQSKKEAAVKHSVPQVSDEKSARIEELYDFIVERLR 565 Query: 544 LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 Y D+ I A+ + +L + + F + + E ++ KRI IL Sbjct: 566 GYYADKGIPTTHFNAVAELKPVSLYDFHRRLDAIGRFAALPEAEALAVANKRIRNILRKA 625 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 E K I + AE L + T + ++D K Y + L + PI+ Sbjct: 626 EIK---IPASVDATLFDQPAESGLLVALEGVITDTRSALDCKNYVSVLTCLARLRPPIDE 682 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD+V+VN ++ +R NRL+LLQ + + V ++ + Sbjct: 683 FFDKVMVNDENLMLRANRLALLQRLGEYLCCVAAIEHL 720 >gi|227510291|ref|ZP_03940340.1| glycine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189943|gb|EEI70010.1| glycine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 693 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 339/733 (46%), Gaps = 74/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + FLLEI EEIPA + + L LK++ + + ++ + TP RL LY+ GL Sbjct: 1 MANNFLLEIGLEEIPAHVVTPSINQLKKRASDYLKDQRITFDQIKTFSTPRRLTLYITGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ + GP G KA GF R G T K+ K D Sbjct: 61 ADKQPDIDKSVKGPAKKIAQDTDGNWTKAAIGFSRGQGATTDD--ITFKEVKGTDYVFVE 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++VL + I + +P M+W+ +F ++RP+K ++ +L Sbjct: 119 KHIAGKSVDEVLTGM-KDVITAMTFPTMMKWANY-----SFEYVRPIKWLVALL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+I + ++ +T GHRF +++ + D Y L + V+ D + R+ I+ Sbjct: 168 DKVIPFSILDVSTDRVTSGHRFLG-KDVELANADEYEEKLTQQFVIADAKKRKELIVKQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H++A ++ D DLLEE+ LVEW F G F+ KYL +P+E++ ++K +Q+ F Sbjct: 227 HKIAEDNDWQINLDPDLLEEVNNLVEWPTAFAGKFNDKYLKIPDEVLITSMKDHQRFFYV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI V N ++ GN +V+ ARLEDA+ F++ DQ Sbjct: 287 TNGDGTLLPHFISVRNG-NDYDIQNVIAGNEKVLTARLEDAMFFYEEDQ----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 K + + + RL V FH KI T E++ R++V+ + + ++ Sbjct: 335 ---------KKTIAEDVERLK--KVSFHDKISTMFEKMQRVQVISNYLGKQFGFSDKELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA + K DL T +V EF ELQG +G++YA+L E + AI EH P +P Sbjct: 384 DEQRAAEIYKFDLVTGMVGEFAELQGVMGEKYALLNGEAPAVAKAISEHYMPISANGALP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----- 524 + + ++++DKLD+++ F+A PSGS DPYALRR GI+RI+ + + Sbjct: 444 ASNVGALLAVSDKLDSILTFFAAGMIPSGSNDPYALRRQATGIVRIVADKNWNFDLIDTL 503 Query: 525 ---------------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 L Q + + F DR+K YL D IR+D+ +A+ ++L Sbjct: 504 KAIINLQDKKQVAPKLDQAGQITAVSDFIKDRIKQYLDDLGIRYDISDAVTSGSQTDILF 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + L E + + S R+ +I K+ ++ + E+EK L Sbjct: 564 NISSGQVLQEQKDDDAFKSIIESLTRVLRISKKGHFKDNDL--VVDGSLFENESEKVLNQ 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++ E + + D L + + I +FD +V D ++RDN L L + Sbjct: 622 KVASAAEGYYEISAKEDF----DRLSGLKDAINAYFDATMVMDKDEKLRDNHLRQLTLLS 677 Query: 690 NIILIVINVQKIV 702 ++IL + ++ K+V Sbjct: 678 HLILHLGDLDKLV 690 >gi|221065032|ref|ZP_03541137.1| glycyl-tRNA synthetase, beta subunit [Comamonas testosteroni KF-1] gi|220710055|gb|EED65423.1| glycyl-tRNA synthetase, beta subunit [Comamonas testosteroni KF-1] Length = 704 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 208/730 (28%), Positives = 357/730 (48%), Gaps = 61/730 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN---MRQYWTPHRLFLYLKG 58 + L+E++ EE+P + K + + ++ LK +G++ + Y +P RL +++ Sbjct: 4 SNLLVELFVEELPPKALQKLGDAFAAVIFEQLKAQGLLASTESRLTAYASPRRLAVHITE 63 Query: 59 LSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYL 110 + P + +K + ++L P G A+ L + G + +K+ K + Sbjct: 64 VLPQAEDKAVSQKLMPVSVALDAEGKPTAALLKKLAALGADESAVAALKRQGEGKAEALF 123 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 L+ D ++ + A+ K+P PK MR+ ++ ++RP ++ + + Sbjct: 124 YESTAKGVLLTDGVQKALDEALAKLPIPKVMRYQLQDG-WTSVHFVRPAHGLVVLHGTQV 182 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAI 228 I + + G T+GHRF A P+ +Q+ D Y L E V+ RR I Sbjct: 183 L----IGVKALGLTAGAATHGHRFEAAVDPVVIQNADSYAEQLREEGAVIASFTERRADI 238 Query: 229 LNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 A +G ++D LL+E+ LVE V + F+K++L +P+E + LT+K N Sbjct: 239 ARQLQAAAERIGGGVIPIDDPALLDEVTALVERPNVLVCEFEKEFLAVPQECLILTMKAN 298 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F G L + F++VSNIQ D +A+V GN RVV RL DA F+ +D+ Sbjct: 299 QKYFPLLDANGKLTHQFLIVSNIQPQDA-SAVVGGNERVVRPRLADAKFFFDQDR----- 352 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 K L R+ +LD VV+H K+GTQGER++R+R + K IAQ + Sbjct: 353 ---------------KKTLASRVEQLD--KVVYHNKLGTQGERIARVRAIAKSIAQQLGN 395 Query: 407 DV--ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 L D+A +L+K DL T++V EFPELQG +G+ YA +++ DAIE+H KPR Sbjct: 396 SELGRLADQAAMLAKTDLVTDMVGEFPELQGIMGRYYAQNDGLDVAVADAIEDHYKPRFA 455 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E +++ Sbjct: 456 GDELPRGDVGVIVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVEKDLELD 515 Query: 525 LSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 L L+ F +DRL ++ +EA+L + L + Sbjct: 516 LETLLVSTLPAFGDKIQDATPQLVEFIYDRLANMFREQGYSAQEVEAVLALQPQRLSDVQ 575 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + F + + + KR+ IL E ++ +++ LL +AEK LYAV+ Sbjct: 576 KRLEAVRAFATLPEAPALAAANKRVGNILKKAEA---DVQPQVNDALLLEQAEKDLYAVL 632 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 Q+ Y L ++ ++ FF+QV+VN +D ++ NRL LL + Sbjct: 633 QQVAPKAQQQFAAGDYTASLQTLAALRASVDAFFEQVMVNAEDPALKANRLGLLASLHIA 692 Query: 692 ILIVINVQKI 701 + V ++ ++ Sbjct: 693 MNQVADLARL 702 >gi|317165546|gb|ADV09087.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae TCDC-NG08107] Length = 687 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 206/710 (29%), Positives = 343/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I + DVY + + + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAKIEDLTIIH--DGRQDVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 NIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q + + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQT-ENPSHIIRGNERVLRARLSDAEFFYKQDQ--------------------KAT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQ-NDYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 685 >gi|194467795|ref|ZP_03073781.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus reuteri 100-23] gi|194452648|gb|EDX41546.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus reuteri 100-23] Length = 691 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 194/733 (26%), Positives = 355/733 (48%), Gaps = 75/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + +LLE+ EE+PA + + + L + LKE+ + + +++++ TP R+ L + GL Sbjct: 1 MANTYLLEVGVEEMPAHVVTPSIKQLHARVEKYLKEQRITFDDIQEFATPRRMALLIHGL 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S P+ E GP G KA GF R G K+ K + Sbjct: 61 SDKQPDIDESVKGPARKIAQNADGNWTKAAIGFTRGQGASVEDIEF--KEVKGVEYVFVE 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +VL+ +P I + +P M+W + +IRP++ ++ +L Sbjct: 119 KHIAGKTVAEVLQG-LPAVITSMTFPTLMKWG-----YNNLQFIRPIRWLVSLL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ ++ ++ G T GHRF P+++ D Y L V+ D R+N I + Sbjct: 168 DEVVPFNILDVEAGRETQGHRFLGH-PVEIAKADDYEETLNNDFVIADQTKRKNLIKDQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++ + ++ D+DLLEE+ LVEW F GSFD+KYL LP+ ++ ++K NQ+ F Sbjct: 227 TKIINENNWQVDWDEDLLEEVNNLVEWPTAFAGSFDEKYLALPDPVLITSMKDNQRFFCV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G L + FI V N +D +++GN RV+ RLEDA F++ DQ Sbjct: 287 RDEDGNLLSHFISVRNG-NTDYLDNVIKGNERVLVPRLEDAQFFYQEDQKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +D+ + RL V FH KI + +++ R+ V+ + + ++ ++A Sbjct: 337 -----------TIDEYVERLK--KVSFHDKISSMYDKMQRVAVIANVLGKQLNLSDEELA 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA + K DL T++V EF ELQG +G+ YA L E AI EH P +P Sbjct: 384 DLDRAAHIYKFDLTTQMVGEFAELQGIMGEIYAKLFGEKDDVATAIREHYMPISAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 KI +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + +PL Sbjct: 444 QTKIGAVLAIADKLDSIMSFFAVDMIPSGSNDPYALRRQAFGIVRIIADRGWHLPLLNIQ 503 Query: 530 --------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + FF DR+K H + +RHD+I+A +++ Sbjct: 504 SEIIPAFETAEINVSFDLNKNSDEVRSFFLDRIKQLFHGQKVRHDIIDAATDTRQNDIAN 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++ I+ +++ ++ + + R+ +I + + E++ + P +E +++ Sbjct: 564 VLAAIQTIDDHKDDDSFKEDIEALTRVLRIAKKDNRPVSELA--VDPNLFENPSEAKMHT 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +S+ Q+++ L ++ I +FD+ ++ + ++R+NRL+ L + Sbjct: 622 AVSELIKEDQQTVSEN-----FAALRTLTPIISEYFDENMIMDKNEDIRNNRLAQLSILA 676 Query: 690 NIILIVINVQKIV 702 + ++ N+ ++ Sbjct: 677 HQASLIGNLDNLI 689 >gi|257875468|ref|ZP_05655121.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257809634|gb|EEV38454.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 696 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 200/719 (27%), Positives = 329/719 (45%), Gaps = 75/719 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L + Y + Y TP RL +Y+ G+ + EE GP Sbjct: 21 PAHVVTPSMKQLQEKTAAFLDAHALPYTTIEAYSTPRRLAVYVTGIPEKQADTQEEVKGP 80 Query: 74 R-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T ++ K + + +VLK Sbjct: 81 AKKIALDEAGNWSKAAQGFVRGQGLTTDD--ITFRELKGVEYVYVTKHTQGQPTVEVLKG 138 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + I + +P +M W+ F +IRP+ I+ + E++I + +I G Sbjct: 139 -LQEVITSLTFPVTMHWADYD-----FEYIRPIHWIVALF-----GEQVIPFQILDIVTG 187 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 + GHRF + D Y+ ++ V+ DP R+ I + +A + D Sbjct: 188 RESKGHRFLG-EAVTFDHADDYLEKMKHQFVIADPSERQQMITAQINAIAQENNWRIDLD 246 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLLEE+ LVE+ F+G F++KYL +PEE++ ++K +Q+ F RT +G L FI Sbjct: 247 EDLLEEVTNLVEYPTAFVGDFEEKYLSVPEEVLVTSMKEHQRYFDVRTLDGELLPHFISA 306 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A +++GN +V+ ARLEDA F+ D+ +D Sbjct: 307 RNGDA-VKIDNVIKGNQKVLTARLEDAEFFYNEDKKL--------------------TID 345 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 + +L V FH KIG+ E++ R+ + + I + + ++ + RA + K DL Sbjct: 346 HCVEKLKQ--VTFHEKIGSLYEKMQRVGLAAQIIGKTVGLTQEELTDLQRAAQIYKFDLV 403 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EFPELQG +G++YA++Q E + AI EH P +P +KI +++ADKL Sbjct: 404 TNMVGEFPELQGIMGEKYALIQGEKPAVAQAIREHYMPISAEGELPQSKIGAVLAIADKL 463 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 D+L+ F+A++ PSGS DPYALRR T GIIRI+ E + P +Q E Sbjct: 464 DSLLAFFAVDMVPSGSNDPYALRRQTYGIIRILAEKRWYFPFAQLQEEIREAINAQPEVF 523 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + + F RL+ +L ++ RHD+IEA+L ++ T+ + + L E Sbjct: 524 GIQLAAGQEQVTDFVKGRLRQFLLSKNTRHDVIEAVLGARQADISTLFETAQMLREHLQD 583 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + + R+ + E I P ++E LY + Sbjct: 584 NDFKPSMEALTRVINLAKKAELDQ----AAIDPALFENDSETALYEAVLTVEDKFPHQTM 639 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + Y L ++ IE +FDQ +V V+D ++R NR +LL I + L V ++ ++ Sbjct: 640 EENYQS----LVALRPLIEAYFDQTMVMVEDEQIRRNRFALLDKIAKMSLAVASLDALI 694 >gi|94272282|ref|ZP_01292098.1| Glycine--tRNA ligase [delta proteobacterium MLMS-1] gi|93450178|gb|EAT01487.1| Glycine--tRNA ligase [delta proteobacterium MLMS-1] Length = 694 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 216/727 (29%), Positives = 335/727 (46%), Gaps = 68/727 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L EI SEEIPA A L L L E + + + TP RL + ++ Sbjct: 1 MSARELLFEIGSEEIPAGYIKPALIALQNGLARGLAERELTHGQLYTAATPRRLTVAVQD 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ PE+ EE LGP G +A GF S GL + KGD A Sbjct: 61 LAASQPERQEEVLGPAKKAAFDEAGNPTRAATGFAASRGLTVEQLQI--RSTPKGDYLAA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V ++ R ++L ++P I +P+PKSMRW + RPL+ +L + Sbjct: 119 VTQRRGRQTAELLSELLPELILSLPFPKSMRWGAGK-----IHFARPLRWLLAVY----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + +D L +P GN + GHRF AP + + S + Y+ L +A VL D + RR A++ Sbjct: 169 DGQPLDFTLDGLPAGNRSRGHRFMAPQALTITSYEQYLEQLRQASVLADLDERRQAVVAG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A A G ++ D +L+ + LVE GSFD+++L LP E++ +++ +QK F Sbjct: 229 VEQAAQATGGRVLADPELVATVTNLVESPHALAGSFDQRFLQLPREVLITSLREHQKYFA 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L F+ V+N + D VQG+ RV+ ARLEDAL F+ DQ Sbjct: 289 VVDEQGRLLPRFVAVNNTRVRD-PQLGVQGHQRVLRARLEDALFFFNEDQQ--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL- 410 PL + L V+F AK+G+ + R++ L ++++ D Sbjct: 339 -----------HPLSELAGNL--HGVIFQAKLGSMAHKSGRLQELAGRLSREFAPDEEET 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA L KADL T +V EFP LQG IG++YA Q E + +AI H P +P Sbjct: 386 VTRAAHLCKADLLTNMVGEFPSLQGVIGRDYARRQGEPEAVAEAIHSHYLPLRAGGELPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 ++ + +AD+LDTL + I K +G+ DP+ LRR LG+I ++L ++I +PL+ +++ Sbjct: 446 DRAGAILGIADRLDTLAGCFGIGLKTTGAADPFGLRRQALGLIHLLLGHQIPLPLTPWLK 505 Query: 531 DQ-----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L F R L + + +EA+L + D L Sbjct: 506 QALALYADRLSDDPDTTAGRLRDFIRHRFANDLTRQGLPAAAVEAVLSVDGDELNDAKRR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ L + KR+ I+ I P L+ AEK+L A ++ Sbjct: 566 IEALVAASGRESFTLLAGAFKRVNNIIKDNR------DTRIDPDLLIEPAEKKLAAALAK 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y Q + + + EP++ FFDQV+V + E+R NRL+LL + + L Sbjct: 620 ITAGTAPLLAAGNYQQALEEILEMKEPVDAFFDQVMVMAKEEELRRNRLALLTAVARLFL 679 Query: 694 IVINVQK 700 V + K Sbjct: 680 RVGDFSK 686 >gi|319788543|ref|YP_004148018.1| glycyl-tRNA synthetase subunit beta [Pseudoxanthomonas suwonensis 11-1] gi|317467055|gb|ADV28787.1| glycyl-tRNA synthetase, beta subunit [Pseudoxanthomonas suwonensis 11-1] Length = 724 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 195/754 (25%), Positives = 332/754 (44%), Gaps = 94/754 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ GV R +TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFDGVVAALQKRGVAVDATGARPLYTPRRLAVLLPGVAV 66 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 PE+ E LGP G +A++GF G++ + + KG+ ++ Sbjct: 67 EQPEQHSEVLGPYLNIALDAEGKPTRALEGFAAKAGVEWTALE--RTSDAKGERFVHRSV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 KP ++L +V AI +P PK MRW +++ RP+ ++ +L + Sbjct: 125 KPGARTAELLPEVVSEAIAGMPVPKPMRWGGHD-----YAFARPVHWLVLLL-----GNE 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + + G + GHRF ++ + YI L A VL+DP RR I+ A + Sbjct: 175 VVPAQVLGVASGRSSRGHRFEHDQAVEFAAPGDYIEALRAARVLVDPAERRARIVEQAEQ 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ G +D LE+++ L EW + SF++ +L +P+E + T++ NQK F Sbjct: 235 AAARAGGSARITEDNLEQVVCLTEWPAAVLCSFERDFLAVPQEALIETMEINQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI +NI++ D +G RV+ R DA F+ D Sbjct: 295 AAGKLTEYFIGTANIESRDVAEVS-KGYERVIRPRFADARFFFDED-------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L L V + AK+GT ++V+R+ L + IA + AD A RA Sbjct: 340 ------LKQGLVAMGEGLKT--VTYQAKLGTVADKVARVAALAEAIAPQVGADPAQARRA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+K DL + +V EFPELQG G+ YA+ E AI+E PR + + ++++ Sbjct: 392 AELAKNDLQSRMVNEFPELQGIAGRHYALAAGEPQEVALAIDEAYMPRFSGDAIASSRLG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ ++ L + +E Sbjct: 452 QVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTLIESGFELDLLRLLEASLA 511 Query: 532 --------------------------------------------QNLILFFHDRLKLYLH 547 L F DRL+ Y Sbjct: 512 RIQHHIQLVQDNQAIAAIKSAQASGIETNKKLPPKQPVDIEALGPELYDFILDRLRGYYA 571 Query: 548 DRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN 607 D+ + A+ + +L + I + F + + + + KRI IL K + Sbjct: 572 DKGVPAAHFNAVAELKPASLADLDTRIAAIGTFAALPEADALAAANKRIGNILK---KAD 628 Query: 608 REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 I P +AE+ L + + Y ++ + L + ++ FFDQ Sbjct: 629 IAIPAMEDPALFAEDAERALGEAVEAALGDTDGPLQQHDYVRVLERLARVRPQVDAFFDQ 688 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+VN +D VR NRL+LL+ + + V + + Sbjct: 689 VMVNAEDPAVRGNRLALLKRLADRFGAVAAIGHL 722 >gi|257865840|ref|ZP_05645493.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257872175|ref|ZP_05651828.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257799774|gb|EEV28826.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257806339|gb|EEV35161.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC10] Length = 696 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 200/719 (27%), Positives = 329/719 (45%), Gaps = 75/719 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L + Y + Y TP RL +Y+ G+ + EE GP Sbjct: 21 PAHVVTPSMKQLQEKTAAFLDAHALPYTTIEAYSTPRRLAVYVTGIPEKQADTQEEVKGP 80 Query: 74 R-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T ++ K + + +VLK Sbjct: 81 AKKIALDDAGNWSKAAQGFVRGQGLTTDD--ITFRELKGVEYVYVTKHTQGQPTVEVLKG 138 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + I + +P +M W+ F +IRP+ I+ + E++I + +I G Sbjct: 139 -LQEVITSLTFPVTMHWADYD-----FEYIRPIHWIVALF-----GEQVIPFQILDIVTG 187 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 + GHRF + D Y+ ++ V+ DP R+ I + +A + D Sbjct: 188 RESKGHRFLG-EAVTFDHADDYLEKMKHQFVIADPSERQQMITAQINAIAQENNWRIDLD 246 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLLEE+ LVE+ F+G F++KYL +PEE++ ++K +Q+ F RT +G L FI Sbjct: 247 EDLLEEVTNLVEYPTAFVGDFEEKYLSVPEEVLVTSMKEHQRYFDVRTLDGELLPHFISA 306 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A +++GN +V+ ARLEDA F+ D+ +D Sbjct: 307 RNGDA-VKIDNVIKGNQKVLTARLEDAEFFYNEDKKL--------------------TID 345 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 + +L V FH KIG+ E++ R+ + + I + + ++ + RA + K DL Sbjct: 346 HCVEKLKQ--VTFHEKIGSLYEKMQRVGLAAQIIGKTVGLTQEELTDLQRAAQIYKFDLV 403 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EFPELQG +G++YA++Q E + AI EH P +P +KI +++ADKL Sbjct: 404 TNMVGEFPELQGIMGEKYALIQGEKPAVAQAIREHYMPISAEGELPQSKIGAVLAIADKL 463 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 D+L+ F+A++ PSGS DPYALRR T GIIRI+ E + P +Q E Sbjct: 464 DSLLAFFAVDMVPSGSNDPYALRRQTYGIIRILAEKRWYFPFAQLQEEIREAINAQPEVF 523 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + + F RL+ +L ++ RHD+IEA+L ++ T+ + + L E Sbjct: 524 GIQLAAGQEQVTDFVKGRLRQFLLSKNTRHDVIEAVLGARQADISTLFETAQMLREHLQD 583 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + + R+ + E I P ++E LY + Sbjct: 584 TDFKPSMEALTRVINLAKKAELDQ----AAIDPALFENDSETALYEAVLTVEDKFPHQTM 639 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + Y L ++ IE +FDQ +V V+D ++R NR +LL I + L V ++ ++ Sbjct: 640 EENYQS----LVALRPLIEAYFDQTMVMVEDEQIRRNRFALLDKIAKMSLAVASLDALI 694 >gi|15838553|ref|NP_299241.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa 9a5c] gi|11387205|sp|Q9PC26|SYGB_XYLFA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|9107061|gb|AAF84761.1|AE004015_4 glycyl-tRNA synthetase beta chain [Xylella fastidiosa 9a5c] Length = 722 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 198/758 (26%), Positives = 341/758 (44%), Gaps = 95/758 (12%) Query: 1 MPDF---LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + ++ L++ G+ + + TP RL + Sbjct: 1 MTELKPLLIELGTEELPVNALPNLSRAFFEGVLAGLEKRGIVVDHGEAKSLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L ++ P++ E GP G KA++GF G+ + +I+ KG+ Sbjct: 61 LTAVAVEQPKQYRELFGPYLNTAFDTEGKPTKALEGFAAKCGVNWRTLERIRDT--KGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ + P + +L I+ AI +P PK MRW + + RP+ ++ +L Sbjct: 119 FVHRVVVPGERTDALLPGILTEAIAGMPIPKPMRWGAHE-----YLFARPVHWLVMLLGQ 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + +++ ++ + G I+ GHRF P+ + +YI L+ A VL+DP RR I Sbjct: 174 D-----VVEAEIMGVKAGRISRGHRFLYDKPVSLSDPQNYIDVLQAAYVLVDPAARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + +A VG +D + +++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VAEIEAVARQVGGVARITEDNVAQVVNLVEWPSAVLCSFERVFLEVPQEALIQTMEVNQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI+++D +G RV+ R DA F+ D Sbjct: 289 FFPVLDSLGKLTEKFIGIANIESNDVAEVA-KGYERVIRPRFSDAKFFFNED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L RL V +HAK+GT ++V+R+ VL + IA I D Sbjct: 340 ------------LKQGLKAMGERLRT--VTYHAKLGTLADKVARVLVLAEAIAPQIGVDP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L R +LSK DL + +V EFPELQG G YA++ E AIE+ +PR + + Sbjct: 386 LLARRVALLSKNDLQSRMVNEFPELQGIAGHHYALISGELPEVAMAIEDAYRPRFSGDEI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + + LA++LDTL +A+ KP+G+KDP+ LRR LG+ R ++E++ D+ L Sbjct: 446 ARSPLGKVLGLAERLDTLACGFAVGMKPTGNKDPFGLRRNALGLARTMIESRFDLDLKVL 505 Query: 529 IED---------------------------------------------QNLILFFHDRLK 543 ++ + L F +RL+ Sbjct: 506 LDQASDWVAFATTIEQERHAQESVKQSKKEAAVKHSVPQVSDEKSARIEELYDFIVERLR 565 Query: 544 LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 Y D+ I A+ + +L + + F + + E ++ KRI IL Sbjct: 566 GYYADKGIPTTHFNAVAELKPVSLYDFHRRLDAIGRFAALPEAEALAVANKRIRNILRKA 625 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 E K I + AE L + T + ++D K Y + L + PI+ Sbjct: 626 EIK---IPASVDATLFDQPAESGLLVALEGVITDTRSALDCKNYVSVLTCLARLRPPIDE 682 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD+V+VN ++ +R NRL+LLQ + + V ++ + Sbjct: 683 FFDKVMVNDENLMLRANRLALLQRLGEYLCCVAAIEHL 720 >gi|71275842|ref|ZP_00652126.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Dixon] gi|71899338|ref|ZP_00681498.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Ann-1] gi|170730175|ref|YP_001775608.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa M12] gi|238688047|sp|B0U7B2|SYGB_XYLFM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71163420|gb|EAO13138.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Dixon] gi|71730852|gb|EAO32923.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Ann-1] gi|167964968|gb|ACA11978.1| Glycine--tRNA ligase [Xylella fastidiosa M12] Length = 722 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 198/758 (26%), Positives = 339/758 (44%), Gaps = 95/758 (12%) Query: 1 MPDF---LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + ++ L+ G+ + + TP RL + Sbjct: 1 MTELKPLLIELGTEELPVNALPSLSRAFFEGVLAGLERRGIVIDHGEAKSLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L ++ P++ E GP G KA++GF G+ + +I+ KG+ Sbjct: 61 LTAVAVEQPKQYRELFGPYLNTAFDTEGKPTKALEGFAAKCGVNWRTLERIRDT--KGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ + P + +L I+ AI +P PK MRW + + RP+ ++ + Sbjct: 119 FVHRVVVPGERTDALLPGILTEAIAGMPIPKPMRWGAHE-----YLFARPVHWLVMLFGQ 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + +++ ++ + G I+ GHRF P+ + +YI L+ A VL+DP RR I Sbjct: 174 D-----VVEAEIMGVKAGRISRGHRFLYDKPVSLSDPQNYIDVLQAAYVLVDPAARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + +A VG +D + +++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VAEIEAVARQVGGVARITEDNVAQVVNLVEWPSAVLCSFERVFLEVPQEALIQTMEVNQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI+++D +G RV+ R DA F+ D Sbjct: 289 FFPVLDSLGKLTEKFIGIANIESNDVAEVA-KGYERVIRPRFSDAKFFFNED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L RL V +HAK+GT ++V+R+ VL + IA I D Sbjct: 340 ------------LKQGLKAMGERLRT--VTYHAKLGTLADKVARVLVLAEAIAPQIGVDP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L R +LSK DL + +V EFPELQG G YA++ E AIE+ +PR + + Sbjct: 386 LLARRVALLSKNDLQSRMVNEFPELQGVAGHHYALISGELPEVAMAIEDAYRPRFSGDEI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + + LA++LDTL +A+ KP+G+KDP+ LRR LG+ R I+E++ D+ L Sbjct: 446 ARSPLGKVLGLAERLDTLACGFAVGMKPTGNKDPFGLRRNALGLARTIIESRFDLDLKVL 505 Query: 529 IED---------------------------------------------QNLILFFHDRLK 543 ++ + L F +RL+ Sbjct: 506 LDQASDWVAFATTIEQERHAQESVKQSKKEAAVKHSLPQVSDEKSARIEELYDFIVERLR 565 Query: 544 LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 Y D+ I A+ + +L + + F + + E ++ KRI IL Sbjct: 566 GYYADKGIPTTHFNAVAELKPVSLYDFHRRLDAIGRFAALPEAEALAVANKRIRNILRKA 625 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 E K I + AE L + T + ++D K Y + L + PI+ Sbjct: 626 EIK---IPASVDATLFDQPAESGLLVALEGVITDTRSALDCKNYVSVLTCLARLRPPIDE 682 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD+V+VN ++ +R NRL+LLQ + + V ++ + Sbjct: 683 FFDKVMVNDENLMLRANRLALLQRLGEYLCCVAAIEHL 720 >gi|94264056|ref|ZP_01287856.1| Glycine--tRNA ligase [delta proteobacterium MLMS-1] gi|93455567|gb|EAT05754.1| Glycine--tRNA ligase [delta proteobacterium MLMS-1] Length = 694 Score = 541 bits (1395), Expect = e-151, Method: Composition-based stats. Identities = 216/727 (29%), Positives = 335/727 (46%), Gaps = 68/727 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L EI SEEIPA A L L L E + + + TP RL + ++ Sbjct: 1 MSARELLFEIGSEEIPAGYIKPALIALQNGLARGLAERELTHGQLYTAATPRRLTVAVQD 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ PE+ EE LGP G +A GF S GL + KGD A Sbjct: 61 LAAGQPERQEEVLGPAKKAAFDEAGNPTRAATGFAASRGLTVEQLQI--RSTPKGDYLAA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V ++ R ++L ++P I +P+PKSMRW + RPL+ +L + Sbjct: 119 VTQRRGRQTAELLSELLPELILSLPFPKSMRWGAGK-----IHFARPLRWLLAVY----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + +D L +P GN + GHRF AP + + S + Y+ L +A VL D + RR A++ Sbjct: 169 DGQPLDFTLDGLPAGNRSRGHRFMAPQALTITSYEQYLEQLRQASVLADLDERRQAVVAG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A A G ++ D +L+ + LVE GSFD+++L LP E++ +++ +QK F Sbjct: 229 VEQAAQATGGRVLADPELVATVTNLVESPHALAGSFDQRFLQLPREVLITSLREHQKYFA 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L F+ V+N + D VQG+ RV+ ARLEDAL F+ DQ Sbjct: 289 VVDEQGRLLPRFVAVNNTRVRD-PQLGVQGHQRVLRARLEDALFFFNEDQQ--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL- 410 PL + L V+F AK+G+ + R++ L ++++ D Sbjct: 339 -----------HPLSELAGNL--HGVIFQAKLGSMAHKSGRLQELAGRLSREFAPDEEET 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA L KADL T +V EFP LQG IG++YA Q E + +AI H P +P Sbjct: 386 VTRAAHLCKADLLTNMVGEFPSLQGVIGRDYARRQGEPEAVAEAIHSHYLPLRAGGELPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 ++ + +AD+LDTL + I K +G+ DP+ LRR LG+I ++L ++I +PL+ +++ Sbjct: 446 DRAGAILGIADRLDTLAGCFGIGLKTTGAADPFGLRRQALGLIHLLLGHQIPLPLTPWLK 505 Query: 531 DQ-----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L F R L + + +EA+L + D L Sbjct: 506 QALALYADRLSDDPDTTAGRLRDFIRHRFANDLTRQGLPAAAVEAVLSVDGDELNDAKRR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ L + KR+ I+ I P L+ AEK+L A ++ Sbjct: 566 IEALVAASGRESFTLLAGAFKRVNNIIKDNR------DTRIDPDLLIEPAEKKLAAALAK 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y Q + + + EP++ FFDQV+V + E+R NRL+LL + + L Sbjct: 620 ITAGTAPLLAAGNYQQALEEILEMKEPVDAFFDQVMVMAKEEELRRNRLALLTAVARLFL 679 Query: 694 IVINVQK 700 V + K Sbjct: 680 RVGDFSK 686 >gi|206889181|ref|YP_002249886.1| glycyl-tRNA synthetase, beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] gi|238064856|sp|B5YJ12|SYGB_THEYD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|206741119|gb|ACI20176.1| glycyl-tRNA synthetase, beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] Length = 679 Score = 541 bits (1395), Expect = e-151, Method: Composition-based stats. Identities = 212/720 (29%), Positives = 354/720 (49%), Gaps = 61/720 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L EI +EEIPAR A + + E + ++++ Y TP RL L + LS Sbjct: 1 MGKILFEIGAEEIPARFIPLAISQIEENFKKITSEYRIELESIKVYATPRRLTLLAE-LS 59 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + + GP V G K++ F ++ G++ K KG+ AVL Sbjct: 60 SEQASEEKLVWGPPVHVAFDEKGLPKESAYAFAKAQGIEVDQLQI--KPKGKGNYVCAVL 117 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K + E+VL I+ + +PK MRW +IRP++ L + + Sbjct: 118 SKKGKKTEEVLPEILRNLFYSLNFPKMMRWGEG-----TLRFIRPVRWFLALY-----DD 167 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + I +++ I N T GHRF + +P+ + +D+Y LE+A V++DPE R+ IL A Sbjct: 168 RFISFEIEGIKTENKTQGHRFLSENPLNIDRVDNYEFILEKAFVIVDPEKRKKIILTQAE 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA V +++ + +L+EE+ LVE+ + SF +YL LPEEL+ +K +Q+ F Sbjct: 228 ELAKKVNGKILWNNELIEEVTYLVEFPNSVLCSFSMQYLKLPEELLITVMKDHQRYFAII 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L N F++VSN +A + I +G RV+ AR EDA +++ D Sbjct: 288 DNEGKLKNYFVVVSNTKA-ENEENIKKGAERVIKARFEDARFYYEED------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVD 412 L K L + +++H K+G+ ++ RI + ++++ + + LV Sbjct: 334 -------LKKGLVNLLE--ATKGIIYHKKLGSLYDKSLRIIRIAERLSDRLIPEKTELVK 384 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A KADL + +V EFPELQG +G YA AI EH P+G + +P+N Sbjct: 385 IAANYCKADLASGVVGEFPELQGIMGGYYAKNAGMPEEVFLAIREHYLPKGFTDEIPSND 444 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 I +SLADKLD + F+ + E PSG++DP+ LRRA GII I+L+ K + L + + Sbjct: 445 IGCIISLADKLDHIATFFYLGEIPSGTEDPFGLRRAANGIISILLKKKYSLSLLETVSMI 504 Query: 532 ---------QNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFF 581 + + +F R + YL +LI+ I + I ++ ++ F Sbjct: 505 QEFVDEKLKEQISIFIVQRFESYLESTGYDVNLIKTISDFILIRPVYEIKKRLEAVSLFR 564 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S E+F L+ KR+ I+ EK E++P+ E EK+L+ I + ++ E Sbjct: 565 SKEDFEEFFLAVKRVSNIIKNYEK------FELNPELFSSEEEKKLFNEIEKYKENLYEY 618 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ +++ + + LH + I FFD VLV D +++ NRL+LLQ++ ++ V ++ ++ Sbjct: 619 LNSQQFFEALNYLHKLTPTINNFFDNVLVMDKDEKIKRNRLALLQHLSELLKSVADISRL 678 >gi|297617793|ref|YP_003702952.1| glycyl-tRNA synthetase subunit beta [Syntrophothermus lipocalidus DSM 12680] gi|297145630|gb|ADI02387.1| glycyl-tRNA synthetase, beta subunit [Syntrophothermus lipocalidus DSM 12680] Length = 688 Score = 541 bits (1395), Expect = e-151, Method: Composition-based stats. Identities = 210/726 (28%), Positives = 346/726 (47%), Gaps = 67/726 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D + EI +EEIPA A D+ + L + + ++R TP RL LY+ L+ + Sbjct: 4 DLVFEIGTEEIPAAYMPNAIRDMEALAREKLSGANLSFGSLRTMGTPRRLVLYVYDLAEN 63 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++E GP+ G A GF R+ G+ S ++ D AV ++ Sbjct: 64 QAGWLKEVRGPKREQAFDAEGRPTSAALGFARAQGVTVESLE--VREMSGVDYVFAVKKE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +VL ++ + + +PK+MRW+ S F + RP++ +L +L ++ Sbjct: 122 SGKKTVEVLPGVLREIVVDLGFPKAMRWA-----YSEFRFARPIRWMLALL-----GNEV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ + N+T+GHRF + PI V +Y +E+A V++D E RR I Sbjct: 172 IPVQIENVEASNVTFGHRFLSERPITVNEAANYFELMEKAFVVVDHERRRQMIWEQILNT 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A G D++LLEE+ L+E+ F G F +YL LP E++ T+ +Q+ F + Sbjct: 232 AEQAGGYPYNDEELLEEVNFLLEYPTAFYGKFSPEYLVLPTEVLTTTMIEHQRYFPVFSD 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + GN RV+ ARLEDAL F++ D Sbjct: 292 DGKLLPGFIGVRNGD-EYNLEEVKAGNERVLRARLEDALFFYREDT-------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-DVALVDRA 414 +PL ++ L +VV+ A++GT +V R++ + I + + RA Sbjct: 337 ------KQPLASKVELLK--NVVYQARLGTVWSKVERLQDIAVFIGKETGLGRETTIRRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL T +V EFPELQG +G+ YA+ E+ +AI EH PR + +P Sbjct: 389 AYLCKADLETNMVYEFPELQGIMGRYYALASGEDPEVAEAILEHYLPRFAGDRLPETPAG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 I VSLA+KLD L+ + IN KPSGS+DPYALRR LG++ IIL+ + + L + I Sbjct: 449 IAVSLAEKLDNLVGCFCINIKPSGSQDPYALRRQALGLVNIILKRGLRLDLEKAIRFVYQ 508 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F RL+ L D I +D+++A+L ++L + + Sbjct: 509 GFAPIKPDLSCEETVGEVLDFVLQRLRGILSDSGISYDVLDAVLAVPQGDVLEVRKRAEA 568 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L EF S E ++ R + + + ++ + L EAE+R+Y ++ Sbjct: 569 LQEFKQSEYFEDGMVVFNRCYNLAKKWDNRD------VDEVLLETEAERRVYQWLAQTEP 622 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + E + Y + L ++ FD V++ +D +R NRLSLL+ I ++ L + Sbjct: 623 LLNELKERGEYGEYLITLSKGRAGVDELFDAVMIMAEDPNLRRNRLSLLRRISDLFLNLG 682 Query: 697 NVQKIV 702 + ++V Sbjct: 683 DFSRLV 688 >gi|71897929|ref|ZP_00680134.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Ann-1] gi|71732173|gb|EAO34228.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Ann-1] Length = 722 Score = 541 bits (1394), Expect = e-151, Method: Composition-based stats. Identities = 198/758 (26%), Positives = 338/758 (44%), Gaps = 95/758 (12%) Query: 1 MPDF---LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + ++ L+ G+ + + TP RL + Sbjct: 1 MTELKPLLIELGTEELPVNALPNLSRAFFEGVLAGLERRGIVVDHGEAKSLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L ++ P++ E GP G KA++GF G+ + +I+ KG+ Sbjct: 61 LTAVAVEQPKQYRELFGPYLNTAFDTEGKPTKALEGFAAKCGVNWRTLERIRDT--KGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ + P + +L I+ AI +P PK MRW + + RP+ ++ + Sbjct: 119 FVHRVVVPGERTDALLPGILTEAIAGMPIPKPMRWGAHE-----YLFARPVHWLVMLFGQ 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + ++ ++ + G I+ GHRF P+ + +YI L+ A VL+DP RR I Sbjct: 174 D-----VVQAEIMGVKAGRISRGHRFLYDKPVSLSGPQNYIDVLQAAYVLVDPAARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + +A VG +D + +++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VAEIEAVARQVGGVARITEDNVAQVVNLVEWPSAVLCSFERVFLEVPQEALIQTMEVNQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI+++D +G RV+ R DA F+ D Sbjct: 289 FFPVLDSLGKLTEKFIGIANIESNDVAEVA-KGYERVIRPRFSDAKFFFNED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L RL V +HAK+GT ++V+R+ VL + IA I D Sbjct: 340 ------------LKQGLKVMGERLRT--VTYHAKLGTLADKVARVLVLAEAIAPQIGVDP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L R +LSK DL + +V EFPELQG G YA++ E AIE+ +PR + + Sbjct: 386 LLARRVALLSKNDLQSRMVNEFPELQGVAGHHYALISGELPEVAMAIEDAYRPRFSGDEI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + + LA++LDTL +A+ KP+G+KDP+ LRR LG+ R I+E++ D+ L Sbjct: 446 ARSPLGKVLGLAERLDTLACGFAVGMKPTGNKDPFGLRRNALGLARTIIESRFDLDLKVL 505 Query: 529 IED---------------------------------------------QNLILFFHDRLK 543 ++ + L F +RL+ Sbjct: 506 LDQASDWVAFATTIEQERHAQESVKQSKKEAAVKHSVPQVSDEKSARIEELYDFIVERLR 565 Query: 544 LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 Y D+ I A+ + +L + + F + + E ++ KRI IL Sbjct: 566 GYYADKGIPTTHFNAVAELKPVSLYDFHRRLDAIGRFAALPEAEALAVANKRIRNILRKA 625 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 E K I + AE L + T + ++D K Y + L + PI+ Sbjct: 626 EIK---IPASVDATLFDQPAESGLLVALEGVITDTRSALDCKNYVSVLTCLARLRPPIDE 682 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD+V+VN ++ +R NRL+LLQ + + V ++ + Sbjct: 683 FFDKVMVNDENLMLRANRLALLQRLGEYLCCVAAIEHL 720 >gi|209524276|ref|ZP_03272826.1| glycyl-tRNA synthetase, beta subunit [Arthrospira maxima CS-328] gi|209495367|gb|EDZ95672.1| glycyl-tRNA synthetase, beta subunit [Arthrospira maxima CS-328] Length = 713 Score = 541 bits (1394), Expect = e-151, Method: Composition-based stats. Identities = 203/717 (28%), Positives = 338/717 (47%), Gaps = 71/717 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A ++ LKE+ + ++++ Y TP RL + + GL Sbjct: 1 MPSFLLEVGTEELPATFVEGAIAQWEAMIPASLKEQYLTCESVKVYATPRRLAVVIAGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G KA +GF + + + KGD + + Sbjct: 61 QQQPDREEEIKGPPASAAFKDGKPTKAAEGFAKKQNINLEDIEI--RPTPKGDFVFVLKQ 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R ++L ++P I ++ + MRW + RP++ ++ +L E Sbjct: 119 IPGRKTSEILTELIPQWINRLEGKRFMRWGDGD-----IRFPRPIRWLVALLDKEIL-PL 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I + I + GHR + + + Y L +A V +DP+ R+ AI N Sbjct: 173 SIPNGSETISSDRHSQGHRVLHSNSVSIAEATDYAETLGKAFVEVDPQTRKTAIANQVKV 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A++VG E ++LL E++ LVEW +G+FD +L LP E+I++ + T+Q+ F Sbjct: 233 AANSVGGEAEIPEELLNEVVNLVEWPTAVVGTFDADFLVLPPEVIKMVMVTHQRYFPVLD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI +SN + A I GN RV+ ARL D F+K D Sbjct: 293 THGNLKPYFITISNGDPAKA-AIIASGNERVIRARLADGEFFYKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 L KPL+ + L+ +V F +G+ ++V+RI +I + ++ ++A + Sbjct: 338 ------LKKPLENYLPDLE--NVTFQEDLGSVRDKVNRIIANADRIGKQLEVREGELAQI 389 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L KADL +++V EFPEL+G +G++YA+ E + AI EH P+G + +PTN Sbjct: 390 KRAALLCKADLVSQMVYEFPELEGIMGEKYALAGGEPEAIAKAIVEHYLPKGASDRLPTN 449 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V+LADKLDTL++ + + P+GS DP+ALRRA G++ II + + L + ++D Sbjct: 450 IISQVVALADKLDTLVSIFGLGMLPTGSSDPFALRRAANGVVNIIWSADLPLNLHELLKD 509 Query: 532 -----------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPEN--------D 565 +L FF R++ L D + I +DL+ A+L E+ Sbjct: 510 LTTDFVNSHPNAMLGLIHHLEDFFLQRIRTLLQDEKAIDYDLVNAVLGDEDIEYKERALQ 569 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLEISPQYLLLEA 623 +LL + D L E + + R ++ + E+ I+P + Sbjct: 570 DLLDVRDRALFLQEIRGDGTLDIIYETINRSTRLAKQGDLDTGELQPHAVINPSLFEKYS 629 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREV 677 E+ + D + Q +++ + Y Q+ L +I + FFD VLV + +V Sbjct: 630 EQAFMEALEDLIPNTQAALETRNYRQLVTALAAIVPTVTQFFDGENSVLVMDSNPKV 686 >gi|241767222|ref|ZP_04764968.1| glycyl-tRNA synthetase, beta subunit [Acidovorax delafieldii 2AN] gi|241362135|gb|EER58230.1| glycyl-tRNA synthetase, beta subunit [Acidovorax delafieldii 2AN] Length = 709 Score = 541 bits (1393), Expect = e-151, Method: Composition-based stats. Identities = 199/736 (27%), Positives = 338/736 (45%), Gaps = 69/736 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L LK +G+ + + +P RL ++ ++ Sbjct: 5 NLLVELFVEELPPKALQKLGDAFATVLADQLKAQGLATAASAVTPFASPRRLAAHVTAVA 64 Query: 61 PHSPEKI-EERLGP------RVGAGKKAIDGFLRSTGLQTIS-----DCQIKKDPKKGDV 108 + +K +++L P G A+ L++ G + + K + Sbjct: 65 DKAADKAVQQKLMPVTVGLDASGNATPALLKKLQALGADVSNPVAAVAALKRAQDGKAET 124 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS----PISAFSWIRPLKSILC 164 ++ L+ + AI K+P PK M + ++ ++RP ++ Sbjct: 125 LFYDSVVAGATLQAGLQKALDEAIAKLPIPKVMSYQLETDCELPGWTSVHFVRPAHGLVA 184 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPE 222 + ++ + + GN T GHRF A P+ ++ D Y L+ V+ Sbjct: 185 L-----HGSTVVPVKALGLTAGNHTQGHRFEAAVSPVVLRDADSYAATLKTDGAVVASFA 239 Query: 223 CRRNAILNDAHRLASA--VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIR 280 R+ I A+ G +ED+ LL+E+ LVE V + F++++L +P+E + Sbjct: 240 ERKAEIARQLAAAAAQVGNGARPIEDEALLDEVTALVERPNVLICQFEEQFLDVPQECLI 299 Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 LT+K NQK F G L N F++VSNI D + + GN RVV RL DA F+ +D Sbjct: 300 LTMKANQKYFPLLDAAGKLTNKFLVVSNISPEDT-SFVTGGNERVVRPRLADAKFFFDQD 358 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + K L R+ L VV+H K+GTQGERV R+R + K I Sbjct: 359 R--------------------KKTLASRVEGLS--KVVYHNKLGTQGERVERVRAIAKAI 396 Query: 401 AQLIDADVALVDRAIVLS--KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 A + + D + K DL T++V EFPELQG +G+ YA+ + DAIE+H Sbjct: 397 AAQLGDAALVADADLAAQLAKTDLVTDMVGEFPELQGTMGRYYALNDGLGETVADAIEDH 456 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 KPR + +P N + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E Sbjct: 457 YKPRFAGDTLPRNTAGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVE 516 Query: 519 NKIDIPLSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 + + LS L F +DRL L ++ ++A+L Sbjct: 517 KDLPLDLSVLLAGAVPAFGDKITDATPALADFIYDRLAGSLREQGFSAQEVDAVLALRPQ 576 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + + + F + + + KR+ IL KK E+ ++P+ L +AE+ Sbjct: 577 RLALVEKQLAAVRAFAALPESPALAAANKRVSNIL----KKAGEVDPHVNPELLQEKAEQ 632 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA + F D Y L + P++ FFD V+VN + ++R NR LL Sbjct: 633 DLYAALQRFVPEANAQFDAGDYTASLKTLAVLRAPVDAFFDDVMVNAEQLDLRLNRQGLL 692 Query: 686 QYIKNIILIVINVQKI 701 + + + + V ++ ++ Sbjct: 693 KSLHDAMNRVADLSRL 708 >gi|300361840|ref|ZP_07058017.1| glycyl-tRNA synthetase beta subunit [Lactobacillus gasseri JV-V03] gi|300354459|gb|EFJ70330.1| glycyl-tRNA synthetase beta subunit [Lactobacillus gasseri JV-V03] Length = 690 Score = 541 bits (1393), Expect = e-151, Method: Composition-based stats. Identities = 201/732 (27%), Positives = 343/732 (46%), Gaps = 77/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSRSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF R G+ T I + KG Y V + Sbjct: 63 KQDDIDEVKKGPAKKIAQDKDGNWTKAAQGFARGQGMTTDD---IYFEELKGTEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K + D+L + I+ + +P MRW + F ++RP+ ++ +L +E Sbjct: 120 QKEGKKASDILMGM-SDIIKAMTFPTKMRWDSND-----FEFVRPIHWMVSLLGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + L ++ G T GHRF + + + D Y L+ V+ D + R+ ILN Sbjct: 170 -VVPVKLLDVVAGRKTQGHRFLG-DSVVLANADDYEEALKSQYVIADADERKGMILNQIQ 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 228 ELVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N FI V N S+ ++ GN +V+ ARL+DA F+ D+ Sbjct: 288 DENGKLINHFIAVRNG-NSEYLDNVIAGNEKVLVARLDDAQFFYDEDK------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 PL + +L +V FH KIG+ E ++R++++G + + + Sbjct: 335 --------KYPLAHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNISETEMKD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P ++P+ Sbjct: 385 FDRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLTGEDENVSVAIKESYMPTSAEGDLPS 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ Sbjct: 445 TTVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPVKDVLP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F DR+K L +D+I+A+L + + I Sbjct: 505 ELIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L A + + S RI IL + +N + ++ +E+ L A Sbjct: 565 LAAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRN---AAKVDESLFQDVSEEELNAG 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ + S+ + + I +F+ ++ D +V++NRL+ L + N Sbjct: 622 VNALEENTDLSIAD-----LYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKVNN 676 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 677 LADRMGDLSKLV 688 >gi|218885395|ref|YP_002434716.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226737048|sp|B8DPG1|SYGB_DESVM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218756349|gb|ACL07248.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 701 Score = 541 bits (1393), Expect = e-151, Method: Composition-based stats. Identities = 206/734 (28%), Positives = 332/734 (45%), Gaps = 68/734 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI EE+P+R +L+ L ++GV ++++R TP R + ++G++ Sbjct: 1 MSQFVLEIGFEELPSRFLPGLERELAERFARALDDDGVEHESIRVLTTPRRAAVLIEGIN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E E GP V G KA +GF R+ G+ + KG+ Sbjct: 61 PVQREAEEVVPGPPVRVAFDAEGKPTKAAEGFARTQGVDMADIFTL--STDKGEYIAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R D++ T P + +P+PK MRW + F++ RPL+ +L + + Sbjct: 119 RTGGANAADLIATACPTVVAALPFPKRMRWGSGD-----FTFGRPLRWLLALF-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRD-LEEAMVLLDPECRRNAILNDA 232 ++ ++ + G +T+GHR H P+ V+S D Y+ +E+ V DP RR IL Sbjct: 169 AVVPFEVGGVVSGGVTWGHRIHGAGPLVVKSADDYLNVVIEKGGVTPDPAERRAMILAGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A A G ++ + LL+E+ GL E +G D +L LP E++ +++++QK F Sbjct: 229 NAAAEAAGGRILWKESLLDEVQGLAEHPVPLLGDIDPSFLELPREVLLTSMESHQKSFGV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V N+ D A + +G RV+ ARLED FWK D Sbjct: 289 EGPDGALLPHFLTVLNLTPLDV-ALVKKGWERVLRARLEDGRFFWKTD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALV 411 L+ D +A LD +V+F +G+ G++ R+ L +A+ AD + Sbjct: 336 --------LAASFDAWLAELD--NVIFLGPLGSMGDKTRRLEKLCAWLAKAAGVADESAC 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSKADL +E+V EF LQG +G YA E + A+ E P GP VP Sbjct: 386 ARAGRLSKADLVSEMVGEFDTLQGIMGGIYARRMGEPETVAAALAEQYLPAGPDSPVPAT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S+ADK DT+ + + P+G+ DPYALRR LGI RI+LE+ + I + + Sbjct: 446 LAGALLSIADKADTMAGCFGLGMIPTGAADPYALRRCALGIARIVLEHGLRIDVRELFRT 505 Query: 532 Q------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPE-----NDNLL 568 L FF RLK + L+EA L + ++ Sbjct: 506 ALALYGERAWKLAPAEALVKLEEFFMARLKNHFMAAGHETLLVEAALAADTPEGAGIDVR 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRL 627 + L++F +L+ KR I+ + ++ + S L +AEK L Sbjct: 566 AAGARLAALSDFSRRDDFGSAVLTFKRAANIIRKQGQEGGAVLDGAYSHALLAEDAEKAL 625 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 A + + + + LL + ++ FFD V+V DD VR NRL+LL+ Sbjct: 626 AARLEEVAPRFDALWAADDFASLFGLLGELRPAVDAFFDGVMVMCDDAAVRTNRLNLLKA 685 Query: 688 IKNIILIVINVQKI 701 + + + + + Sbjct: 686 LTLRLGRLADFGAL 699 >gi|116629753|ref|YP_814925.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri ATCC 33323] gi|282851790|ref|ZP_06261153.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 224-1] gi|311110605|ref|ZP_07712002.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri MV-22] gi|122273309|sp|Q042Y5|SYGB_LACGA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116095335|gb|ABJ60487.1| glycyl-tRNA synthetase beta chain [Lactobacillus gasseri ATCC 33323] gi|282557032|gb|EFB62631.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 224-1] gi|311065759|gb|EFQ46099.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri MV-22] Length = 690 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 201/732 (27%), Positives = 342/732 (46%), Gaps = 77/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSRSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF R G+ T I + KG Y V + Sbjct: 63 KQDDIDEVKKGPAKKIAQDKDGNWTKAAQGFARGQGMTTDD---IYFEELKGTEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K + D+L + I+ + +P MRW + F ++RP+ ++ +L +E Sbjct: 120 QKEGKKASDILMGM-SDIIKAMTFPTKMRWDSND-----FEFVRPIHWMVSLLGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + L ++ G T GHRF + + + D Y L+ V+ D + R+ ILN Sbjct: 170 -VVPVKLLDVVAGRKTQGHRFLG-DSVVLANADDYEEALKSQYVIADADERKGMILNQIQ 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 228 ELVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N FI V N S+ ++ GN +V+ ARL+DA F+ D+ Sbjct: 288 DENGKLINHFIAVRNG-NSEYLDNVIAGNEKVLVARLDDAQFFYDEDK------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 PL + +L +V FH KIG+ E ++R+ ++G + + + Sbjct: 335 --------KYPLAHFVDKLK--NVSFHDKIGSVAEHMARVHIIGDYLGKKFNISETEMKD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P ++P+ Sbjct: 385 FDRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLTGEDENVSVAIKESYMPTSAEGDLPS 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ Sbjct: 445 TTVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPVKDVLP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F DR+K L +D+I+A+L + + I Sbjct: 505 ELIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L A + + S RI IL + +N + ++ +E+ L A Sbjct: 565 LAAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRN---AAKVDESLFQDVSEEELNAG 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ + S+ + + I +F+ ++ D +V++NRL+ L + N Sbjct: 622 VNALEENTDLSIAD-----LYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKVNN 676 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 677 LADRMGDLSKLV 688 >gi|282934650|ref|ZP_06339893.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] gi|281301225|gb|EFA93526.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] Length = 688 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 204/732 (27%), Positives = 348/732 (47%), Gaps = 79/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + ++ + L+ LK+ G+ ++ ++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSRSVKQLADRTSKFLKDNGLEFKAIKTFSTPRRLTILVQDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF+R G+ T I + KG Y V + Sbjct: 63 KQADIDEIKKGPAKKIALDSEGNFTKAAQGFVRGQGMTTDD---IYFEELKGTEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K +L D+L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 120 QKAGKLATDILLGM-SDIIKAMTFPTKMRWGSND-----FEFVRPIHWLVSLFGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + + +I G T GHRF + + + D Y L+ V+ D R+ I+N Sbjct: 170 -VVPVKILDITAGRKTMGHRFLG-DSVILANSDDYEEALKGQFVIADAAERKTMIVNQID 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +L + ++ D LLEE+ LVE+ VF GSFD+ YL +P+E++ ++K NQ+ F Sbjct: 228 QLVAENNWKVKLDASLLEEVTNLVEYPTVFAGSFDESYLNIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L N FI V N + ++ GN +V+ ARL+DA F+ D+ Sbjct: 288 DQDGKLINHFISVRNG-NKEFLENVISGNEKVLVARLDDAKFFYDEDK------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VAL 410 PL ++RLD V FH KIG+ E++ R+R++G+ +A+ + Sbjct: 335 --------KYPLSHFVSRLD--KVSFHDKIGSMAEKLVRVRIIGEYLAKKFGLSDGVIKN 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +PT Sbjct: 385 FDRASELYKFDLVTQMVGEFAELQGVMGMHYAELAGENKDVALAIKEHYMPLTAEGELPT 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 +++ +S+ADK D +I F+A P+ S DPYALRR GI+RI+L + + + Sbjct: 445 SEVGALLSVADKFDNIITFFAAGMIPTSSNDPYALRRYAYGIVRILLNQNWSLAIDKALP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ED+ + LF DR+K +L + ++D+I+A+L + I Sbjct: 505 EMVELLDGKTKAKMPKTGQEDEEISLFIRDRIKQFLQTNNYKYDVIDAVLHSSQTDPSRI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L S + + + S RI IL + K + + +E LY Sbjct: 565 LAAAKVLQAHHDSPEFKPVVESLIRIENILKKAKYKGDSV---VKSDLFEDNSENELYLA 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + ++ + S+ + I+ +F+ ++ D V++NRL+ L I Sbjct: 622 SQNLQ-------AIDNFTELYEAFVSMQKVIDRYFEVNMIMAKDEAVKNNRLAQLSQINE 674 Query: 691 IILIVINVQKIV 702 + + + K+V Sbjct: 675 LATRLGALSKLV 686 >gi|73540213|ref|YP_294733.1| glycyl-tRNA synthetase subunit beta [Ralstonia eutropha JMP134] gi|72117626|gb|AAZ59889.1| Glycyl-tRNA synthetase, beta subunit [Ralstonia eutropha JMP134] Length = 710 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 202/737 (27%), Positives = 352/737 (47%), Gaps = 69/737 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLK 57 M D L+E+++EE+P + + + + L L+E ++ + + + +P RL + Sbjct: 5 MTDSLLIELFTEELPPKALARLGDAFAQGLFAGLRERDLLEADAAVTPFASPRRLAALVS 64 Query: 58 GLSPHSPEKIE-ERLGP------RVGAGKKAIDGFLR----STGLQTISDCQIKK-DPKK 105 G+ +P++ + E++ P G + L S G+ I +++ K Sbjct: 65 GVRRSAPDREQREKVLPLTVALGANGEPTAPLAKKLAALAKSVGVAEIDWQTLERASDGK 124 Query: 106 GDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCI 165 + + + L+ + I K+P PK M + ++RP ++ + Sbjct: 125 AEAFFYRYTAKGAELAAGLQAALDDTIGKLPIPKVMSYQRP--GGETVHFVRPAHRLIAL 182 Query: 166 LVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECR 224 +E I+ + L +P N+T GHRF + I++ Y L E V+ + R Sbjct: 183 FGSE-----IVPVTLLGLPASNLTQGHRFLSHGTIEIAHATQYADTLLEQGKVIANYAQR 237 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 R +I + A A ++V + LL+E+ LVEW V+ F++ +L +P+E + LT++ Sbjct: 238 RESIREQLLKAAGAD--QVVMPEALLDEVNSLVEWPVVYACHFEEAFLAVPQECLILTMQ 295 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 TNQK F EG L N F++VSN+ A++ +I+ GN RVV RL DA F+ +D+ Sbjct: 296 TNQKYFALTDAEGHLRNRFLIVSNL-ATETPQSIITGNERVVRPRLADAKFFFDQDR--- 351 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 K L R+ +L VV+H KIGTQ +RV R++ + IA + Sbjct: 352 -----------------KKTLASRVPQL--ASVVYHNKIGTQLDRVQRLQQIAGHIADAM 392 Query: 405 DA-----DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 +A D A R L+KADL T++V EFPELQG +G YA +E+ A EH Sbjct: 393 NASGFAVDKAAAMRGAELAKADLLTDMVGEFPELQGTMGTYYARHDDESEDVALACSEHY 452 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 +PR + +P +S V+LADKL+TL+ W I +P+G KDP+ALRR LGI+R+++E Sbjct: 453 RPRFAGDVLPEGAVSTAVALADKLETLVGIWGIGLQPTGEKDPFALRRHALGILRMLIEK 512 Query: 520 KIDIPLSQF---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + + + + F +DR++ YL D+ + +EA++ Sbjct: 513 PLALSVDTLLALTQQAFAGVPAVKPAPDAIADFLYDRVRGYLKDKGYTTNEVEAVVSLRP 572 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 L I+ ++ + F + + E + KRI IL + ++I+ ++P +AE Sbjct: 573 QQLHDILGRLEAVRTFAALPEAEALAAANKRITNILKKNAEAAQDIA-AVNPALFQEDAE 631 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + L+ I + + + L + E ++ FFD V+V +D ++R NRL+L Sbjct: 632 RALHGAIERVRPDAEAAFARGDFTSALRDLAQLREAVDGFFDNVMVMAEDAQLRANRLAL 691 Query: 685 LQYIKNIILIVINVQKI 701 L + + V ++ K+ Sbjct: 692 LASLHALANRVADISKL 708 >gi|328957484|ref|YP_004374870.1| glycine--tRNA ligase subunit beta [Carnobacterium sp. 17-4] gi|328673808|gb|AEB29854.1| glycine--tRNA ligase subunit beta [Carnobacterium sp. 17-4] Length = 694 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 201/731 (27%), Positives = 342/731 (46%), Gaps = 71/731 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + LLEI EE+PA + +++ L+ + LKE + + + + TP RL + +K ++ Sbjct: 3 KNLLLEIGLEEVPAHIVTPSSKQLTQKVAAFLKENRLAHGEVIPFSTPRRLAVIVKDIAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E GP G KA GF R G T K K + Sbjct: 63 KQEDIEESVKGPAKKIAQDAEGNWSKAAIGFARGQGATTED--IYFKSIKDVEYVYVDKF 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++D+L + I + +P SM W + +F +IRP + +L E+ Sbjct: 121 ISGKTVKDILVG-LDEVITSMTFPVSMHWGSH-----SFKYIRPFHWLTAML-----DEE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ ++ N + GHRF + S Y + LE V+ D R+ I++ Sbjct: 170 VIPFEILDVQTANTSRGHRFLGQD-VTFASALDYEKTLENVYVIADSAKRKQMIVSQIEE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L A + D+ LLEE+ L+E+ F GSFDKKYL LPEE++ ++K +Q+ F + Sbjct: 229 LMEANQWSVTFDEKLLEEVNNLIEYPTAFYGSFDKKYLDLPEEVLITSMKDHQRYFGVKD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG++ FI V N A + + +GN +V+ ARL+D F++ DQ Sbjct: 289 GEGIILPYFISVRNGNA-EHIETVAKGNEKVLTARLDDGQFFFEEDQKL----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + + RL V FH KIG+ E+++R++ + + I + + ++ + Sbjct: 337 ---------TIASCVDRLKQ--VTFHEKIGSIYEKMNRVQAIAQLIGKQVGLTTTELTDL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA + K DL T +V EFPELQG +G++YA++Q EN + AI EH P +P + Sbjct: 386 NRASEIYKFDLVTNMVGEFPELQGIMGEKYALMQGENPTVAAAIREHYMPISSEGELPQS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 + +++ADKL+++++F+A+ P+GS DPYALRR T GI+RII P+ E Sbjct: 446 SVGAVLAIADKLESVLSFFAVGMIPTGSNDPYALRRQTYGIVRIIESKNWVFPMDSLKEG 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +I F R++ L IRHD+I+A L +N+L ++ Sbjct: 506 ILAAPVINQSALIEGYQSSTAQVIDFIKARVRQLLMAESIRHDVIDAALNSRQENVLKLI 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + + +N S A + + + R+ + ++ + + P +EK L+ Sbjct: 566 EASRIINGHLSDAIFKSTIEALTRVLNLADKGKELLAQEQASVDPALFETISEKNLHDSF 625 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 I + Q + + IE FF++ +V D+ VR+NRL+LL I + Sbjct: 626 ----AKIATKSSQENSSQSYEAFEQLQPLIEAFFNENMVMADNEAVRNNRLALLMQISDF 681 Query: 692 ILIVINVQKIV 702 +L +V K+V Sbjct: 682 VLSFASVDKLV 692 >gi|320106526|ref|YP_004182116.1| glycyl-tRNA synthetase subunit beta [Terriglobus saanensis SP1PR4] gi|319925047|gb|ADV82122.1| glycyl-tRNA synthetase, beta subunit [Terriglobus saanensis SP1PR4] Length = 697 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 204/727 (28%), Positives = 338/727 (46%), Gaps = 58/727 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKG 58 M +FL EI EE+PARM A +L+ + LL E ++ ++ + TP RL + ++G Sbjct: 1 MAEFLFEIGLEEVPARMLASAEAELARRTMDLLGRERLLDGDVSFESFSTPRRLAVLVRG 60 Query: 59 LSPHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P P+ EE +GP + G A + F + G+ + + KG+ A Sbjct: 61 VRPQQPDVTEEIVGPSTKIAYKDGVPTAAAEAFAKKAGVSLDALKTV--TNAKGEYLGAD 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + R DV+ ++P I + W K+M W ++RPL+ +L +L Sbjct: 119 VHRAGRSASDVIVELLPKEIASIYWAKTMYWRAGK----PERFVRPLQWLLALL-----D 169 Query: 173 EKIIDLDLKEIPCGNITYGHR-FHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +KI+ + GN T GHR H P+ ++ Y LE A VL E RR I Sbjct: 170 DKIVPVTWAGKTAGNTTRGHRVLHGAEPVVIEHPGQYRERLEAAKVLPHVEDRRYKIRKA 229 Query: 232 AHRLASAV-GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + V ED L++ + L EW V +G F+++YL LPEE++ ++ +QK F Sbjct: 230 LDHVMRTVPETRWREDHALVDAVTHLTEWPTVLIGKFEEEYLALPEEVLVTVMRDHQKYF 289 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIV-QGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 + G LA F+ V N QA + G I+ GN RV+ AR DA FW DQ Sbjct: 290 AVEDKSGKLAPYFLTVLNTQADEAGEHIIRHGNERVLRARFNDARFFWDYDQ-------- 341 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK-----KIAQLI 404 L R+ +L +V F +G+ ++ R+R L + I Sbjct: 342 ------------KITLADRVEKLR--NVTFQKDLGSYFDKTERVRALAASLEAIAADRKI 387 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D +D A +L+K DL +E+V+EF ELQG +G YA Q + AI + KP Sbjct: 388 PVDTKALDEAALLAKTDLTSELVKEFTELQGIVGGLYARAQGHSEIAAIAIYDQYKPTSM 447 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 ++++P + I +S+ADK DT+ +A+ +P+GSKDP+ALRRA GI+R++ E K+ I Sbjct: 448 VDDLPRSTEGILLSIADKADTIGGMFALGLEPTGSKDPFALRRAANGIVRMLGEAKLPIT 507 Query: 525 LSQF--------IEDQNLILFFHDRLKLYLHD-RDIRHDLIEAILRPENDNLLTIVDLIK 575 LS+ + FF +R++ YL + + +D+++A+L +++ + + Sbjct: 508 LSEIATLATTDPETCSKVKGFFAERVEFYLREAKGQAYDVVKAVLAAGAEDVSDTLARAE 567 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + S S KR+ IL+ K ++L E++L Sbjct: 568 AVTAARGSEDFLAIAASFKRMANILSQARAKGDSAPFAAGKEFLTEPTERKLAEEAGRLA 627 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + Y Q + + ++ ++ FFD V+V +D ++R RL LLQ + + Sbjct: 628 AWVDGLRRKQEYEQALEAIATLRPHVDAFFDSVMVMAEDEKIRRARLGLLQRVLADFSKI 687 Query: 696 INVQKIV 702 + +IV Sbjct: 688 ADFSEIV 694 >gi|218441712|ref|YP_002380041.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 7424] gi|226737047|sp|B7KD52|SYGB_CYAP7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218174440|gb|ACK73173.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 7424] Length = 717 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 199/723 (27%), Positives = 336/723 (46%), Gaps = 75/723 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA +A + L+E+ + + + Y TP RL + +KGL Sbjct: 1 MPSFLLEVGTEELPANFVDEAIAQWQSRIPSSLEEQQLTPEGIEFYGTPRRLAVLIKGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++IEE GP G KA++GF+R G+ +D KG+ Sbjct: 61 AKQSDRIEEVKGPAANVAFKSGKPTKALEGFVRKQGVTPDEVEI--RDTDKGEFVFVQKN 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L+ +VP I ++ + MRW + RP++ ++ + + + Sbjct: 119 ITGRNTTEILQELVPQWITQLEGRRFMRWGDGD-----LRFPRPIRWLVTLWDQDILPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ ++ +TYGHR AP + + Y + L++A V + P RR I + Sbjct: 174 LVNG-ATQVKSDRLTYGHRILAPESVSIPEASAYQKSLQQAYVEVSPLQRRQTIEQQIEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR- 293 +A + V DLL+E++ LVE+ G+F+ +L LP E+I + T+Q+ F + Sbjct: 233 VAKQLKGVAVIPPDLLDEVVNLVEYPSAVAGNFEPDFLNLPTEVITTVMVTHQRYFPVKA 292 Query: 294 ----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 + L FI +SN + G I GN RV+ ARL DA F+K D + Sbjct: 293 TGKTNKNNTLLPYFITISNGDP-NKGEIIAAGNERVIRARLADAQFFYKADCDE------ 345 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV- 408 PL+ + +L+ V F ++GT ++V RI + + IA +D D Sbjct: 346 --------------PLESYLPQLET--VTFQEQLGTIRDKVDRIMEISQLIADQLDLDSG 389 Query: 409 --ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + ++ +L KADL T++V EFPELQG +G++YA+ E+ + I EH PRG + Sbjct: 390 ERSEIESTAMLCKADLVTQMVYEFPELQGVMGQKYALASGESPNVALGIFEHYLPRGADD 449 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + V LAD++DT+++ + + P+GS DP+ALRRA GII++ ++ I + Sbjct: 450 IMPESLTGQVVGLADRIDTIVSIFGLGMIPTGSGDPFALRRAATGIIKVTWYAELPIDIL 509 Query: 527 QFIED----------------QNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEN----- 564 +E ++L FF RL L D I +DL+ A+L + Sbjct: 510 DLLEQSSQDFVTAHPDKTSPIESLKSFFIQRLSTLLQDDLHIDYDLVNAVLGENDPEYTE 569 Query: 565 ---DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYL 619 +LL + D + L ++ K ++ + R ++ E +E+ E I P Sbjct: 570 RALRDLLDVRDRAQFLQSIRNNQKIDEIYETVNRSARLAVKGELDTQELDPEKVIRPALF 629 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDRE 676 +E+ Y V+ D + + Y + D L I + FF D VLV ++ E Sbjct: 630 EKSSEEHFYKVLIDLVPTTLTAQRERNYQLLVDALGKIAPTVSNFFDGEDSVLVMDENLE 689 Query: 677 VRD 679 VR+ Sbjct: 690 VRE 692 >gi|209519016|ref|ZP_03267824.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. H160] gi|209500528|gb|EEA00576.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. H160] Length = 699 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 205/714 (28%), Positives = 331/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + + + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGEPSFERYATPRRLAVTIHNVRAVAPEKHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGL-QTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 + P + G + L + G + + K + + P + D Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFTVNDLERAQDGKAEAFFLRYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P P M + S+ ++RP + + E+II + + I Sbjct: 139 LQAALDETLPKLPIPTPMTYQRPDG--SSVQFVRPAHRLTAL-----HGEEIIPVSVLGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 + T GHRF + +++Q Y LE V+ R+ AI + A + Sbjct: 192 DADDTTLGHRFLSEGFVQIQHAQSYAETLEHRGRVIASFAKRKEAIRSQLLAHAGED--K 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LLEE+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLEEVTSLVEWPVVYECRFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ + IV+GN RVV RL DA F+ +D + Sbjct: 310 FLIVSNIETA-TPVEIVEGNERVVRPRLADAKFFFTQD--------------------MK 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+ +RV R+ L IA L DVAL RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSALQRVERLEGLAGAIAALTGGDVALATRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT V+LADK Sbjct: 407 ITDMVGEFPELQGTMGTYYARHDGEQEEVALACSEHYQPRFSGDALPTTATGTIVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+TL+ W I +P+G KDP+ALRR LG++RI++E ++++ + Sbjct: 467 LETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLNVDFVELLRVAYAQFAGVPNV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + F DRL+ L +R I+A+L L IV + + EF S A+ E Sbjct: 527 ADSTDAIYEFSMDRLRGLLRERGYAAGEIDAVLALNPTRLDDIVARLDAVREFASLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P AEK L A + +Q + + Y Sbjct: 587 SLAAANKRISNILK---KSEGVTNGGVQPALFTEAAEKALNAQLEQVTPRVQSQLAVRDY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 644 TGALTALAALREPVDTFFNDVMVNAEDPALRANRLALLGALHQQMNCVADISRL 697 >gi|320529362|ref|ZP_08030450.1| glycyl-tRNA synthetase, beta subunit [Selenomonas artemidis F0399] gi|320138328|gb|EFW30222.1| glycyl-tRNA synthetase, beta subunit [Selenomonas artemidis F0399] Length = 687 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 200/731 (27%), Positives = 324/731 (44%), Gaps = 80/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA ++ + +L E+ + Y +R TP R+ L + G + Sbjct: 4 DLLLEIGTEEIPAHAMPNLLREMKRLAGEMLTEQRISYDEIRTLGTPRRMALIVTGAAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP + G KA GF R + I++D A + + Sbjct: 64 QADVNTETRGPAISIAFDADGNPTKAGAGFARGQHVAPED--LIRRDG----YVYAAVHE 117 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++LK ++P I+ +P P SMRW F +IRP++ I+ + + + Sbjct: 118 TGAPTAEILKELLPALIRAIPLPNSMRWGDLD-----FRFIRPIRWIVALYGTD-----V 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L E+ GN + GHR AP + S Y E A +++DP RR I Sbjct: 168 VPFTLAEVTSGNRSRGHRTLAPEDFTITSAADYETACEAAYIIVDPVRRRAMISEQIADA 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G DLLEE++ LVE+ GSF++KYL LP E + ++ +Q+ F + Sbjct: 228 AKACGGTAEITPDLLEEVLYLVEYPTALSGSFEEKYLALPAEAVITPMRDHQRYFPVKAA 287 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + + GN RV+ ARL DA F+ D+ Sbjct: 288 DGSLLPVFITVRNGG-REHLDVVAHGNERVLRARLADAQFFFDEDR-------------- 332 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--------D 407 K L + +L VVF +G+ E+ R+ L + + + A Sbjct: 333 ------KKTLAEHREKLHT--VVFQQGLGSMYEKTERLAQLAASVVEDMTAGDDAAYETM 384 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A RA LSKADL T +V EF ELQG +G+EYA+L E AI+E PR + Sbjct: 385 AADARRAAELSKADLVTGMVTEFTELQGIMGREYALLDGEKPEVARAIDEQYMPRFAGDA 444 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + + +S+ADK+D ++ ++ + P+GS+DP+ LRR LG++ +++ ++ I LS Sbjct: 445 LPESDLGFALSVADKIDNIVGTFSRGKIPTGSQDPFGLRRQALGLVNMLILHESGILLSD 504 Query: 528 FIE----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 I+ ++ F RLK L +R +RHD+ EA+L + D + + Sbjct: 505 LIDEACDLYDLDDAARSKMQGDVAEFIRLRLKNVLTERGVRHDVQEAVLS-DVDAVADVP 563 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + + S R+ I + + P + E+ ++ Sbjct: 564 GRAAYVERLLEESDAAALVQSFVRVGNIARSA------PTGAVDPALFAADEERA---LL 614 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + + + I+ FFD V+V D V+ NRLSLL+ I N Sbjct: 615 AAYEAAAELRAAGGDTAETIAAERRLAVAIDAFFDAVMVMDKDARVKTNRLSLLKSIDND 674 Query: 692 ILIVINVQKIV 702 +L + + KIV Sbjct: 675 LLEIADFSKIV 685 >gi|307153543|ref|YP_003888927.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 7822] gi|306983771|gb|ADN15652.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 7822] Length = 717 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 193/723 (26%), Positives = 333/723 (46%), Gaps = 75/723 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA +A + L+E+ + Q + Y TP RL + +K L Sbjct: 1 MPSFLLEVGTEELPASFVDEAIAQWQNRIATSLEEQLLTPQGIEIYGTPRRLAVLIKELP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G KA++GFL G+ + ++ KGD + Sbjct: 61 TKQPDREEEIKGPAANVAFSNGKPTKALEGFLTRQGVAPENVEI--RNTNKGDFVFVQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L+ + P I ++ + MRW + RP++ ++ + E + Sbjct: 119 IIGRTTTEILQELAPQWITQLEGRRFMRWGDGD-----LRFPRPIRWLVALWDKEVLPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + +++GHR P + + + Y + L++A V + P RR++I + Sbjct: 174 LVNGGTL-LKSDRLSWGHRILHPEAVSIPEANAYQKSLQQAYVEVSPHQRRSSIKQQIEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A + V +LL+E++ LVE+ +G FD ++L LP E+I + T+Q+ F +T Sbjct: 233 AAKPLKGVAVIPPELLDEVVNLVEYPTAVVGKFDAEFLNLPTEVITTVMVTHQRYFPVQT 292 Query: 295 REGV-----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 L FI ++N I GN RV+ ARL DA F+K D + Sbjct: 293 STKKTNDSTLLPHFITIANGDPKKA-DLIASGNQRVIRARLADAQFFYKADCD------- 344 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL+ + +L+ V F ++GT ++V RI + + I + ++ + Sbjct: 345 -------------QPLESYLPQLET--VTFQEQLGTIRDKVDRIMEISQLIVEQLELEQQ 389 Query: 410 L---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 ++ +L KADL T++V EFPELQG +G++YA++ E+ + I EH PRG + Sbjct: 390 ERTEIESTAMLCKADLVTQMVYEFPELQGVMGQKYALVSGESPNVAQGIFEHYLPRGADD 449 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + V LAD++DTL++ + + P+GS DP+ALRRA G+I++ + I L Sbjct: 450 MMPESLTGQVVGLADRIDTLVSIFGLGMIPTGSGDPFALRRAATGVIKVTWYADLPIDLL 509 Query: 527 QFIEDQN----------------LILFFHDRLKLYLHDR-DIRHDLIEAILRPEN----- 564 IE + L F RL L D I +DL+ A+L + Sbjct: 510 ALIEQSSEDFVTAHPDKTSPVEALKSFLIQRLSTLLQDDLKIDYDLVNAVLGENDPEYAQ 569 Query: 565 ---DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYL 619 ++LL + D + L E ++ K E+ + R ++ + +E+ I P Sbjct: 570 RALEDLLDVRDRAQFLQEIRNNKKLEEIYETVNRSARLAVKGDLNTQELDPPKVIRPDLF 629 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDRE 676 +EK+ Y + D Q + + Y + D L I + FF D VLV ++ E Sbjct: 630 EKSSEKQFYEALIDLVPTTQTAQAERNYQLLVDALAKIAPTVSNFFDGDDSVLVMDENPE 689 Query: 677 VRD 679 +R Sbjct: 690 IRQ 692 >gi|238853402|ref|ZP_04643781.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 202-4] gi|238833974|gb|EEQ26232.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 202-4] Length = 690 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 201/732 (27%), Positives = 342/732 (46%), Gaps = 77/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSRSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF R G+ T I + KG Y V + Sbjct: 63 KQDDIDEVKKGPAKKIAQDKDGNWTKAAQGFARGQGMTTDD---IYFEELKGTEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K + D+L + I+ + +P MRW + F ++RP+ ++ +L +E Sbjct: 120 QKEGKKASDILMGM-SDIIKAMTFPTKMRWDSND-----FEFVRPIHWMVSLLGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + L ++ G T GHRF + + + D Y L+ V+ D + R+ ILN Sbjct: 170 -VVPVKLLDVVAGRKTQGHRFLG-DSVVLANADDYEEALKSQYVIADADERKGMILNQIQ 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 228 ELVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N FI V N S+ ++ GN +V+ ARL+DA F+ D+ Sbjct: 288 DENGKLINHFIAVRNG-NSEYLDNVIAGNEKVLVARLDDAQFFYDEDK------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 PL + +L +V FH KIG+ E ++R+ ++G + + + Sbjct: 335 --------KYPLAHFVDKLK--NVSFHDKIGSVAEHMARVHIIGDYLGKKFNISETEMKD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P ++P+ Sbjct: 385 FDRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLTGEDENVSVAIKESYMPTSAEGDLPS 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ Sbjct: 445 TTVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPVKDVLP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F DR+K L +D+I+A+L + + I Sbjct: 505 ELIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L A + + S RI IL + +N + ++ +E+ L A Sbjct: 565 LAAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRN---AAKVDESLFQDVSEEELNAG 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ + S+ + + I +F+ ++ D +V++NRL+ L + N Sbjct: 622 VNALEENTDLSIAD-----LYKGFVELQPVINHYFESNMILDKDEKVKNNRLAQLLKVNN 676 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 677 LADRMGDLSKLV 688 >gi|227524442|ref|ZP_03954491.1| glycine--tRNA ligase [Lactobacillus hilgardii ATCC 8290] gi|227088401|gb|EEI23713.1| glycine--tRNA ligase [Lactobacillus hilgardii ATCC 8290] Length = 693 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 201/733 (27%), Positives = 340/733 (46%), Gaps = 74/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + FLLEI EEIPA + + L LK++ + + ++ + TP RL LY+ GL Sbjct: 1 MANNFLLEIGLEEIPAHVVTPSINQLKKRASDYLKDQRITFDQIKTFSTPRRLTLYITGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ + GP G KA GF R G T K+ K D Sbjct: 61 ADKQPDIDKSVKGPAKKIAQDTDGNWTKAAIGFSRGQGATTDD--ITFKEVKGTDYVFVE 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++VL + I + +P M+W+ +F ++RP+K ++ +L Sbjct: 119 KHIAGKSVDEVLTGM-KDVITAMTFPTMMKWAKY-----SFEYVRPIKWLVALL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+I + ++ +T GHRF +++ + D Y L + V+ D + R+ I+ Sbjct: 168 DKVIPFTILDVSTDRVTSGHRFLG-KDVELANADEYEEKLTQQFVIADAKKRKELIVKQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H++A ++ D DLLEE+ LVEW F G F++KYL +P+E++ ++K +Q+ F Sbjct: 227 HKIAEDNDWQINLDPDLLEEVNNLVEWPTAFAGKFNEKYLKIPDEVLVTSMKDHQRFFYV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI V N ++ GN +V+ ARLEDA+ F++ DQ Sbjct: 287 TDGNGTLLPHFISVRNG-NDYDIQNVIAGNEKVLTARLEDAMFFYEEDQ----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 K + + + RL V FH KI T E++ R++V+ + + ++ Sbjct: 335 ---------KKTIAEDVERLK--KVSFHDKISTMFEKMQRVQVISNYLGKQFGFSDKELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA + K DL T +V EF ELQG +G++YA+L E + AI EH P +P Sbjct: 384 DEQRAAEIYKFDLVTGMVGEFAELQGVMGEKYALLNGEAPAVAKAISEHYMPISANGALP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----- 524 + + ++++DKLD+++ F+A PSGS DPYALRR GI+RI+ + K + Sbjct: 444 ASNVGALLAVSDKLDSILTFFAAGMIPSGSNDPYALRRQATGIVRIVADKKWNFDLIDTL 503 Query: 525 ---------------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 L Q + + F DR+K YL D IR+D+ +A+ ++L Sbjct: 504 KAIINLQDEKQVAPKLDQAGQITAVSDFIKDRIKQYLDDLGIRYDISDAVTSGSQTDILF 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + L E + + S R+ +I K+ ++ + E+EK L Sbjct: 564 NISSGQVLQEQKDDDAFKSIIESLTRVLRISKKGHFKDNDL--VVDGSLFENESEKVLNQ 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++ E + + D L + + I +FD +V D ++RDN L L + Sbjct: 622 EVASAAEGYYEISAKEDF----DRLSGLKDAINAYFDATMVMDKDEKLRDNHLRQLTLLS 677 Query: 690 NIILIVINVQKIV 702 ++IL + ++ K+V Sbjct: 678 HLILHLGDLDKLV 690 >gi|188591265|ref|YP_001795865.1| glycyl-tRNA synthetase subunit beta [Cupriavidus taiwanensis LMG 19424] gi|170938159|emb|CAP63145.1| glycine tRNA synthetase, beta subunit [Cupriavidus taiwanensis LMG 19424] Length = 707 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 203/737 (27%), Positives = 357/737 (48%), Gaps = 72/737 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLYLK 57 M D L+E+++EE+P + + + + L L E ++ + + TP RL + Sbjct: 5 MTDSLLIELFTEELPPKALARLGDAFAQGLFAGLGERDLLEPGATVTPFATPRRLAALVS 64 Query: 58 GLSPHSPEKIE-ERLGP------RVGAGKKAIDGF----LRSTGLQTISDCQIKK-DPKK 105 G+ ++P++ + E++ P G + RS G+ I +++ K Sbjct: 65 GVRRNAPDREQREKVLPLSVALDANGEPTAPLAKKLAALARSVGVAEIDWQALERGSDGK 124 Query: 106 GDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCI 165 + + + L+ + + K+P PK M + S ++RP S++ + Sbjct: 125 AEAFFYRYTARGAELAAGLQATLEDTVAKLPIPKVMSYQRPDG--STVHFVRPAHSLIAL 182 Query: 166 LVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECR 224 +E I+ + L + N+T GHRF + I+++ + Y + LE A V+ R Sbjct: 183 FGSE-----ILPVTLLGLQASNLTQGHRFLSHGAIEIRHANDYAQQLESAGRVVASYAER 237 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 R + + + A A +++ + LL+E+ LVEW V+ F++ +L +P+E + LT++ Sbjct: 238 RERMRSALLQEAGAD--QVIMPEALLDEVNSLVEWPVVYACHFEEAFLAVPQECLILTMQ 295 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 TNQK F +G L N F++VSN+ A++ +I+ GN RVV RL DA F+ +D+ Sbjct: 296 TNQKYFALTDADGHLRNRFLIVSNL-ATETPQSIISGNERVVRPRLADAKFFFDQDR--- 351 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 K L R+ +L VV+H KIGTQ +RV R++ + +A + Sbjct: 352 -----------------KKTLASRVPQL--ASVVYHNKIGTQLDRVQRLQQIAGHVADAL 392 Query: 405 DA-----DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 +A D A R L+KADL T++V EFPELQG +G YA +E A EH Sbjct: 393 NAAGVATDKAAAMRGAELAKADLLTDMVGEFPELQGTMGTYYARHDDEAEDVALACSEHY 452 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 +PR + +P +S V+LADKL+TL+ W I +P+G KDP+ALRR LGI+R+++E Sbjct: 453 RPRFAGDALPAGAVSTAVALADKLETLVGIWGIGLQPTGEKDPFALRRHALGILRMLIEK 512 Query: 520 KIDIPLSQFIEDQN---------------LILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + + L+ + ++ F +DR++ YL D+ + +EA++ Sbjct: 513 PLALSLASLLAQTQQAFAGIAAVKPAPEAILDFLYDRVRGYLKDKGYTTNEVEAVVSLRP 572 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 D L I+ ++ + F + + E + KRI IL KN E ++P +AE Sbjct: 573 DQLHDILGRMEAVRTFAALPEAEALAAANKRITNILR----KNTEPVGAVNPALFREDAE 628 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+A I ++ + + L + + ++ FF+ V+V +D ++R NRL+L Sbjct: 629 GALHAAIERVRPAVEAAFASGDFTTALRDLAQLRDAVDQFFNDVMVMAEDAQLRANRLAL 688 Query: 685 LQYIKNIILIVINVQKI 701 L + + V ++ K+ Sbjct: 689 LASLHALANRVADISKL 705 >gi|256851184|ref|ZP_05556573.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii 27-2-CHN] gi|260660608|ref|ZP_05861523.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii 115-3-CHN] gi|297206049|ref|ZP_06923444.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii JV-V16] gi|256616246|gb|EEU21434.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii 27-2-CHN] gi|260548330|gb|EEX24305.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii 115-3-CHN] gi|297149175|gb|EFH29473.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii JV-V16] Length = 688 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 204/732 (27%), Positives = 348/732 (47%), Gaps = 79/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + ++ + L+ LK+ G+ ++ ++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSRSVKQLADRTSKFLKDNGLEFKAIKTFSTPRRLTILVQDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF+R G+ T I + KG Y V + Sbjct: 63 KQADIDEIKKGPAKKIALDSEGNFTKAAQGFVRGQGMTTDD---IYFEELKGTEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K +L D+L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 120 QKAGKLATDILLGM-SDIIKAMTFPTKMRWGSND-----FEFVRPIHWLVSLFGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + + +I G T GHRF + + + D Y L+ V+ D R+ I+N Sbjct: 170 -VVPVKILDITAGRKTMGHRFLG-DSVILANSDDYEEALKGQFVIADAAERKTMIVNQID 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +L + ++ D LLEE+ LVE+ VF GSFD+ YL +P+E++ ++K NQ+ F Sbjct: 228 QLVAENNWKVKLDASLLEEVTNLVEYPTVFAGSFDESYLNIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L N FI V N + ++ GN +V+ ARL+DA F+ D+ Sbjct: 288 DQDGKLINHFISVRNG-NKEFLENVISGNEKVLVARLDDAKFFYDEDK------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VAL 410 PL ++RLD V FH KIG+ E++ R+R++G+ +A+ + Sbjct: 335 --------KYPLSHFVSRLD--KVSFHDKIGSMAEKLVRVRIIGEYLAKKFGLSDGVIKN 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +PT Sbjct: 385 FDRASELYKFDLVTQMVGEFAELQGVMGMHYAELAGENKDVALAIKEHYMPLTAEGELPT 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 +++ +S+ADK D +I F+A P+ S DPYALRR GI+RI+L + + + Sbjct: 445 SEVGALLSVADKFDNIITFFAAGMIPTSSNDPYALRRYAYGIVRILLNQNWSLAIDKALP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ED+ + LF DR+K +L + ++D+I+A+L + I Sbjct: 505 EMVELLDGKTKAKMPKTGQEDEEISLFIRDRIKQFLQTNNYKYDVIDAVLHSSQKDPSRI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L S + + + S RI IL + K + + +E LY Sbjct: 565 LAAAKVLQAHHDSPEFKPVVESLIRIENILKKAKYKGDSV---VKSDLFEDNSENELYLA 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + ++ + S+ + I+ +F+ ++ D V++NRL+ L I Sbjct: 622 SQNLQ-------AIDNFTELYEAFVSMQKVIDRYFEVNMIMAKDEAVKNNRLAQLSQINE 674 Query: 691 IILIVINVQKIV 702 + + + K+V Sbjct: 675 LATRLGALSKLV 686 >gi|188574648|ref|YP_001911577.1| glycyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519100|gb|ACD57045.1| glycyl-tRNA synthetase, beta subunit [Xanthomonas oryzae pv. oryzae PXO99A] Length = 745 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 193/781 (24%), Positives = 332/781 (42%), Gaps = 118/781 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G+ + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPDLAQAFFDGVLSGLEKRGIAVTRGAAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P ++L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGGHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++I +L + IT GHRF + + Y+ L A VL+DP+ RR I Sbjct: 172 ---GNEVIPAELLGVRGDRITRGHRFMHEGAVSLAVPGDYVEALRAAHVLVDPDARRTRI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVEAAAKQAGGSACISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGTLTEQFIGIANIQSKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L L V + AK+GT ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLQAMGDGL--ASVTYQAKLGTVADKVARVAALAEVIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI++ +PR +++ Sbjct: 386 LQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDQAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L++ Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLTEL 505 Query: 529 IED------------------------------------------------QNLILFFHD 540 ++ ++ F D Sbjct: 506 LKKAVGLVNSALAWSQASKQQTAVEAAKVQGVHVAERQSGGLWVPNVEATSAEILDFILD 565 Query: 541 RLKLYLHDRDIRHDLIEAILRPEN--------------------DNLLTIVDLIKHLNEF 580 RL+ Y D+ + A+ + +L I + F Sbjct: 566 RLRGYYADKGVPATHFNAVAALFSGTSEAVTAPTGVGAHPGATHGSLYDFDRRIDAIGIF 625 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + + KRI IL K EI +I L AE+ L + + Sbjct: 626 ATLPEAQALAAANKRIRNILR---KVEGEIPGDIDTALLREPAEEALAEAVEAAIGATGD 682 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ Y + L + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ Sbjct: 683 ALHRHDYVAVLARLARLRPQVDAFFDGVMVNAEDPQLRANRLALLKKLGDRLGSVAAIEH 742 Query: 701 I 701 + Sbjct: 743 L 743 >gi|126451572|ref|YP_001064998.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 1106a] gi|242317286|ref|ZP_04816302.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1106b] gi|126225214|gb|ABN88754.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1106a] gi|242140525|gb|EES26927.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1106b] Length = 699 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 208/714 (29%), Positives = 337/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + + L +I +Y TP RL + ++ + +PE+ E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 + P GA + L + G +S +++ K + + P + D Sbjct: 79 VLPVSVALDAQGAPSAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HGDRIVPVAAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + ++ + Y L E VL RR I A+A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIRHANAYADTLREKGRVLAHFAQRRETIRTQLE--ANANGDR 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+Q RV R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSQLARVERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFIDRLRGLLRERGYTAGEIDAVLSLNPTRLGDIVARLNAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P + AEK L +++ +Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSESGANGAVQPALFVEAAEKALAEQLAEVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FFD V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALTALAALRAPVDAFFDGVMVNADDPALRANRLALLSALHQQMNCVADISKL 697 >gi|284928750|ref|YP_003421272.1| glycyl-tRNA synthetase beta chain [cyanobacterium UCYN-A] gi|284809209|gb|ADB94914.1| glycyl-tRNA synthetase beta chain [cyanobacterium UCYN-A] Length = 712 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 196/739 (26%), Positives = 340/739 (46%), Gaps = 71/739 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+P +A I+ LK+ + +++ Y TP RL + + GL Sbjct: 3 FLLEIGTEELPTSFVDRAINQWKQIIPTSLKKNFLSSESIFVYGTPRRLAVIITGLLDKQ 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP V G A++GFLR ++ + + KKG+ + Sbjct: 63 TDRNELIKGPSVKAAFTEGKPTIALEGFLRKQNVEIEALEI--RSTKKGECVFVDKKIQG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 ++L ++ I + + M+W F + RP++ I+ + ++ K I+ Sbjct: 121 IKTTEILPELINAWIGGLEGKRFMKWGNGD-----FKFSRPIRWIVSLCDSQILPIK-IE 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 I + +YGHR P PI + Y+ L+ A V +DP R N I ND +A Sbjct: 175 NGDSVITSSSFSYGHRVLRPGPINIPHAASYVDILKSAYVEVDPARRYNIIENDIKTIAE 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-RE 296 + +LL+E++ LVE+ +G+F++++L LP+E+I+ + +Q+ F + Sbjct: 235 NAKGVIDTSHELLKEVVNLVEYPTAILGTFNEEFLELPDEVIKTVMIKHQRYFPIKKISS 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L + FI +SN S I QGN +V+ ARL DA F+ D N Sbjct: 295 NQLLSQFISISNGDPS-KSTIITQGNEKVLKARLSDAQFFYASDSN-------------- 339 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---R 413 + L + +L+ +V F ++G+ +V RI + K+++ + ++ R Sbjct: 340 ------QSLSSYLPKLE--NVTFQKELGSIRNKVDRIINISKQVSNQLQFTPQQIEEVLR 391 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 +L KADL T++V EFPELQG +G++YA++ E I +H PRG + +P + Sbjct: 392 TALLCKADLVTQMVYEFPELQGIMGQKYALVSGELEIVAQGIFDHYLPRGHDDQMPKSLT 451 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 I V +AD+LDTLI + + P+GS DP+ LRRA II I +++ I LS I + Sbjct: 452 GIVVGIADRLDTLIGIFGLGMIPTGSSDPFGLRRAANAIISIAWGSQLSINLSGLISEGC 511 Query: 532 --------------QNLILFFHDRLKLYLHDR-DIRHDLIEAILRP--------ENDNLL 568 ++L FF R++ L D I +DL+ A+L ++ Sbjct: 512 QSFLLNNPEQKSPLKSLRNFFAQRIQSLLQDEMGIDYDLVNAVLGDVESEYIERAFQDIT 571 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI--SPQYLLLEAEKR 626 + + L ++ EK + R ++ E S + +E++ Sbjct: 572 DLKKRAQFLQNIRNNGILEKVYQTINRSTRLAKQGNLGYEEFSPSVIIDNNLFKKLSEQQ 631 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREVRDNRLS 683 LY + + I + +K Y + L +I ++ FFD VLV ++++V+ NRL+ Sbjct: 632 LYDSLINLEPTINFVVTNKDYDLLMKGLINIIPLVDEFFDGKNSVLVMDENQKVKQNRLN 691 Query: 684 LLQYIKNIILIVINVQKIV 702 LL ++N I+ + +IV Sbjct: 692 LLGILRNYGRILADFGEIV 710 >gi|116492863|ref|YP_804598.1| glycyl-tRNA synthetase, beta subunit [Pediococcus pentosaceus ATCC 25745] gi|122265673|sp|Q03F66|SYGB_PEDPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116103013|gb|ABJ68156.1| glycyl-tRNA synthetase beta chain [Pediococcus pentosaceus ATCC 25745] Length = 690 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 203/731 (27%), Positives = 345/731 (47%), Gaps = 78/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LLEI EEIPA + + + L + LKE + Y ++ + TP RL + + GL Sbjct: 1 MAHNYLLEIGLEEIPAHVVTPSIKQLVQKVTAFLKENRLTYDSIDHFSTPRRLAIRINGL 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 P+ E+ GP G KA GF R GL I KG Y+ V Sbjct: 61 GDQQPDIEEDAKGPARKIAQDADGNWTKAAIGFTRGQGLTVDD---ITFKTIKGTDYVYV 117 Query: 113 LR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + ++ +++L + ++ + +P M+W+ F ++RP++ ++ IL Sbjct: 118 HKLIKGKMTKEILTG-LKEVVESINFPTMMKWANFD-----FKYVRPIRWLVSIL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+++ + ++ G T GHRF +++ + + Y L + V++D + R+ I N Sbjct: 167 DEEVLPFSILDVTAGRRTEGHRFLG-EAVELANAEEYEAKLHDQFVIVDADERKQLISNQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A + + + LLEE+ LVEW F G FD+KYL +PEE++ +++ +Q+ F Sbjct: 226 IKAIAESNRWNVTPNPGLLEEVNNLVEWPTAFNGGFDEKYLAIPEEVLITSMRDHQRFFF 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R + G L FI V N + +V+GN +V+ ARLEDA F++ DQ Sbjct: 286 VRDQAGKLLPNFISVRNG-NEEFIENVVRGNEKVLTARLEDAAFFYEEDQ---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--- 408 ++ + RL V FH KIG+ E++ R+ + K I ++ + Sbjct: 335 ----------KHDINYYVDRLK--KVSFHDKIGSMYEKLQRVNSIAKVIGNTLNLNQTEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 +DRA ++ K DL T +V EF ELQG +G++YA L EN + AI EH P ++ Sbjct: 383 DDIDRATMIYKFDLVTGMVGEFSELQGVMGEKYAQLNGENQAVAQAIREHYMPNSAEGDL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + V+LADK D + +F++ PSGS DPYALRR GI+RI+ + L+QF Sbjct: 443 PESVTGAVVALADKFDNIFSFFSAGMIPSGSNDPYALRRHAYGIVRILNSRDWQLDLNQF 502 Query: 529 --------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 ++ FF+DR+K L + I HD++E +L N ++ Sbjct: 503 KSQVKTELAENGTAFGVDVDQNFDQVLNFFNDRIKQLLDHQKISHDIVETVLTGNNHDVT 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I++ + L + +S+ + + + R+ +I K L + PQ +E L+ Sbjct: 563 EIIEAAQVLADAKASSTFKDDIEALTRVQRI---ATKNEESGELNVDPQLFNNASEGELF 619 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 I +M Q+ L + I +FD +V D ++ NRL+++ + Sbjct: 620 DQIIKIEAANNLTMS-----QLFAKLCELTPAISKYFDATMVMDKDENIKRNRLNMMSRL 674 Query: 689 KNIILIVINVQ 699 N+IL + ++ Sbjct: 675 ANLILKIGDLT 685 >gi|237810904|ref|YP_002895355.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei MSHR346] gi|254181748|ref|ZP_04888345.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1655] gi|184212286|gb|EDU09329.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1655] gi|237504911|gb|ACQ97229.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei MSHR346] Length = 699 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 208/714 (29%), Positives = 338/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + + L +I +Y TP RL + ++ + +PE+ E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 + P GA + L + G +S +++ K + + P + D Sbjct: 79 VLPVSVALDAQGAPSAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HGDRIVPVAAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + ++ + Y L E VL RR I A+A G + Sbjct: 192 DAGDTTLGHRFLSDGLVAIRHANAYADTLREKGRVLAHFAQRRETIRTQLE--ANANGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+Q RV R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSQLARVERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFIDRLRGLLRERGYTAGEIDAVLSLNPTRLDDIVARLNAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P + AEK L +++ +Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSESGANGAVQPALFVEAAEKALAEQLAEVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FFD V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALTALAALRAPVDAFFDGVMVNADDPALRANRLALLSALHQQMNCVADISKL 697 >gi|332529556|ref|ZP_08405513.1| glycyl-tRNA synthetase subunit beta [Hylemonella gracilis ATCC 19624] gi|332040994|gb|EGI77363.1| glycyl-tRNA synthetase subunit beta [Hylemonella gracilis ATCC 19624] Length = 734 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 208/759 (27%), Positives = 338/759 (44%), Gaps = 91/759 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K E + +L L+ +G+ + + Y +P RL ++ + Sbjct: 5 NLLVELFVEELPPKALKKLGEAFASVLAEQLRAQGLASADSVVTPYASPRRLAAHVTAVV 64 Query: 61 PHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDC-----QIKKDPKKGDV 108 + +K ++++L P G A+ L++ G + K + Sbjct: 65 GKAADKAVQQKLMPVSVGLDAAGQATPALLKKLQALGADVSDTAKAVAGLKRAPDGKAEA 124 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS----PISAFSWIRPLKSILC 164 P ++ L+ + AI K+P PK M + S+ +++RP ++ Sbjct: 125 LFYDSVVPGATLDAGLQKALDEAIAKLPIPKVMSYQLETDCELPGWSSVNFVRPAHGLVA 184 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKV-QSLDHYIRDLEEAM-VLLDPE 222 + ++ + + GN T GHRF A + V + D Y L + V+ Sbjct: 185 L-----HGSSVVPVQALGLKAGNSTRGHRFEAKKDVVVLKDADGYAAALRDDGAVIASFA 239 Query: 223 CRRNAILNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIR 280 RR I+ AS VG +ED+ LL+E+ LVE V + F+K++L +P+E + Sbjct: 240 ERRAEIVRQLAAAASKVGGGARPIEDEALLDEVTALVERPNVLVCEFEKEFLAVPQECLI 299 Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 LT+K NQK F G L N F++VSNI +D +A++ GN RVV RL DA F+ +D Sbjct: 300 LTMKANQKYFPLLDASGRLTNKFLVVSNISPADA-SAVIGGNERVVRPRLADAKFFFDQD 358 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + K L+ R+ L VV+H K+GTQGERV R+R + K I Sbjct: 359 R--------------------KKTLESRVEGLG--KVVYHNKLGTQGERVERVRAIAKAI 396 Query: 401 AQLIDADV--ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 AQ + A D A L+K DL T++V EFPELQG +G YA AIE+H Sbjct: 397 AQQLGDAKLVAAADTAARLAKTDLLTDMVGEFPELQGIMGGYYARHDGLGEEIAHAIEDH 456 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 KPR + +P N + + V+LADKL+TL+ + I P+G KDP+ALRR LG+IR++ E Sbjct: 457 YKPRFAGDELPRNTVGLVVALADKLETLVGMFGIGNLPTGDKDPFALRRHALGVIRMLGE 516 Query: 519 NKIDIPLSQFIED------------------------------------QNLILFFHDRL 542 + + L + I L F +DRL Sbjct: 517 KNLALDLDKLISSARQVIDQFLLLKVVQAGLPALDKSSNPQNNERPDVAAALSDFIYDRL 576 Query: 543 KLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 L ++ ++A+L L + + + F + + + KRI IL Sbjct: 577 AGSLREQGYSAQEVDAVLALRPQRLGEVPKRLTAVRAFAALPEAAALAAANKRIGNILKK 636 Query: 603 EEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIE 662 E + ++ L AEK L+ + + Y L + P++ Sbjct: 637 AE---GVVEAKVDAALLKESAEKALHGALHSVQPLADSLYANGEYAASLRELAVLKAPVD 693 Query: 663 IFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD V+VN +D +R NRL LL+ + + V ++ ++ Sbjct: 694 AFFDGVMVNAEDPALRANRLGLLKSLHEAMNRVADLSRL 732 >gi|84625799|ref|YP_453171.1| glycyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369739|dbj|BAE70897.1| glycyl-tRNA synthetase beta chain [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 745 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 193/781 (24%), Positives = 332/781 (42%), Gaps = 118/781 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G+ + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPDLAQAFFDGVLSGLEKRGIAVTRGAAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P ++L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGGHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++I +L + IT GHRF + + Y+ L A VL+DP+ RR I Sbjct: 172 ---GNEVIPAELLGVRGDRITRGHRFMHEGAVSLAVPGDYVEALRAAHVLVDPDARRTRI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVEASAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGTLTEQFIGIANIQSKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L L V + AK+GT ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLQAMGDGL--ASVTYQAKLGTVADKVARVAALAEVIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI++ +PR +++ Sbjct: 386 LQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDQAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L++ Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLTEL 505 Query: 529 IED------------------------------------------------QNLILFFHD 540 ++ ++ F D Sbjct: 506 LKKAVGLVNSALAWSQASKQQTAVEAAKVQGVHVAERQSGGLWVPNVEATSAEILDFILD 565 Query: 541 RLKLYLHDRDIRHDLIEAILRPEN--------------------DNLLTIVDLIKHLNEF 580 RL+ Y D+ + A+ + +L I + F Sbjct: 566 RLRGYYADKGVPATHFNAVAALFSGTSEAVTAPTGVGAHPGATHGSLYDFDRRIDAIGIF 625 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + + KRI IL K EI +I L AE+ L + + Sbjct: 626 ATLPEAQALAAANKRIRNILR---KVEGEIPGDIDTALLREPAEEALAEAVEAAIGATGD 682 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ Y + L + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ Sbjct: 683 ALHRHDYVAVLARLARLRPQVDAFFDGVMVNAEDPQLRANRLALLKKLGDRLGSVAAIEH 742 Query: 701 I 701 + Sbjct: 743 L 743 >gi|296134526|ref|YP_003641768.1| glycyl-tRNA synthetase, beta subunit [Thiomonas intermedia K12] gi|295794648|gb|ADG29438.1| glycyl-tRNA synthetase, beta subunit [Thiomonas intermedia K12] Length = 721 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 205/730 (28%), Positives = 357/730 (48%), Gaps = 62/730 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYL-KGL 59 + L+E++ EE+P + E + L L+ +G+ + Y +P RL + + Sbjct: 21 NLLVELFVEELPPKALPALGESFARTLAASLQSQGLAASDCEPTPYASPRRLAVRIPAVA 80 Query: 60 SPHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAV 112 + + + + ++L P G A+ L + GL + +++++ K + Sbjct: 81 AKAADKAVAQKLMPVAVGLDADGKPTPALLKKLGALGLDADAAPRLRREGEGKAETLFID 140 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + + L+ + AI K+P PK M + + ++RP ++ + A+ Sbjct: 141 TVAPGASLAEGLQKALAEAIAKLPIPKVMAYQLEDG-WTTVKFVRPAHGLVALHGAD--- 196 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 ++ + + G T+GHRF A PI +++ D Y L E V+ + RR I Sbjct: 197 --VVPVQALGLTAGRETHGHRFEAQADPIVLRNADSYADQLREQGAVIASFDARRAEIAA 254 Query: 231 DAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A G L ++D LL+E+ LVE V + FD +L +P+E + LT+K NQK Sbjct: 255 QLQATARQAGPGLHPIDDAALLDEVTALVERPNVLLCQFDPAFLAVPQECLILTMKANQK 314 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L + F++VSNI +D +A+++GN RVV RL DA F+++D+ Sbjct: 315 YFPLLDAAGKLTHRFLVVSNISPAD-PSAVIEGNERVVRPRLADAQFFFEQDR------- 366 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD- 407 K L+ R+ LD VV+HAK+G+QGER+ R++ L IA+ I Sbjct: 367 -------------KKRLEDRVPGLD--KVVYHAKLGSQGERMRRVQALAGGIARQISPSF 411 Query: 408 -VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V +RA +L+K DL T++V EFPELQG +G+ YA E+ +AIE+H KPR + Sbjct: 412 PVEQAERAALLAKTDLLTDMVGEFPELQGFMGRYYAAHDGEDAWVAEAIEDHYKPRFSGD 471 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + + ++LADK +TL+ + I E+P+G KDP+ALRR LGI+R+++E I LS Sbjct: 472 VLPRSDVGFALALADKTETLVGLFGIGERPTGDKDPFALRRHALGILRMLMERGQGIELS 531 Query: 527 QFIEDQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +++E+ ++ F +DRL L ++ ++A+L L + Sbjct: 532 RYLENAVPVFSGVAGFSDPSADVQTFLYDRLANLLREQGWTAQEVDAVLALSPQILADVP 591 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + F + + + KR+ IL E + + L+ AE L + Sbjct: 592 RRLEAVRAFAALPEAAALAAANKRVGNILRKSE--GAKHGSGFNADLLVEPAEIALSQAL 649 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +Q+ Y +L ++ EP++ FFDQV+VN +D +R NRL+LL ++ Sbjct: 650 NAVAPQVQQLYAAGDYTAALKMLAALKEPVDTFFDQVMVNAEDPALRVNRLALLARLQEA 709 Query: 692 ILIVINVQKI 701 + V ++ ++ Sbjct: 710 MNQVADLSRL 719 >gi|227513298|ref|ZP_03943347.1| glycine--tRNA ligase [Lactobacillus buchneri ATCC 11577] gi|227083499|gb|EEI18811.1| glycine--tRNA ligase [Lactobacillus buchneri ATCC 11577] Length = 693 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 339/733 (46%), Gaps = 74/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + FLLEI EEIPA + + L LK++ + + ++ + TP RL LY+ GL Sbjct: 1 MANNFLLEIGLEEIPAHVVTPSINQLKKRASDYLKDQRITFDQIKTFSTPRRLTLYITGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ + GP G KA GF R G T K+ K D Sbjct: 61 ADKQPDIDKSVKGPAKKIAQDTDGNWTKAAIGFSRGQGATTDD--ITFKEVKGTDYVFVE 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++VL + I + +P M+W+ +F ++RP+K ++ +L Sbjct: 119 KHIAGKSVDEVLTGM-KDVITAMTFPTMMKWANY-----SFEYVRPIKWLVALL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+I + ++ + GHRF +++ + D Y L + V+ D + R+ I+ Sbjct: 168 DKVIPFTILDVSTDRVISGHRFLG-KDVELANADEYEEKLTQQFVIADAKKRKELIVKQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H++A ++ D DLLEE+ LVEW F G F++KYL +P+E++ ++K +Q+ F Sbjct: 227 HKIAEDNDWQINLDPDLLEEVNNLVEWPTAFAGKFNEKYLKIPDEVLVTSMKDHQRFFYV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI V N ++ GN +V+ ARLEDA+ F++ DQ Sbjct: 287 TDGNGTLLPHFISVRNG-NDYDIQNVIAGNEKVLTARLEDAMFFYEEDQ----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 K + + + RL V FH KI T E++ R++V+ + + ++ Sbjct: 335 ---------KKTIAEDVERLK--KVSFHDKISTMFEKMQRVQVISNYLGKQFGFSDKELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA + K DL T +V EF ELQG +G++YA+L E + AI EH P +P Sbjct: 384 DEQRAAEIYKFDLVTGMVGEFAELQGVMGEKYALLNGEAPAVAKAISEHYMPISANGALP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----- 524 + + ++++DKLD+++ F+A PSGS DPYALRR GI+RI+ + K + Sbjct: 444 ASNVGALLAVSDKLDSILTFFAAGMIPSGSNDPYALRRQATGIVRIVADKKWNFDLIDTL 503 Query: 525 ---------------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 L Q + + F DR+K YL D IR+D+ +A+ ++L Sbjct: 504 KAIINLQDEKQVAPKLDQAGQITAVSDFIKDRIKQYLDDLGIRYDISDAVTSGSQTDILF 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + L E + + S R+ +I K+ ++ + E+EK L Sbjct: 564 NISSGQVLQEQKDDDAFKSIIESLTRVLRISKKGHFKDNDL--VVDGSLFENESEKVLNQ 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++ E + + D L + + I +FD +V D ++RDN L L + Sbjct: 622 EVASAAEGYYEISAKEDF----DRLSGLKDAINAYFDATMVMDKDEKLRDNHLRQLTLLS 677 Query: 690 NIILIVINVQKIV 702 ++IL + ++ K+V Sbjct: 678 HLILHLGDLDKLV 690 >gi|311031644|ref|ZP_07709734.1| glycyl-tRNA synthetase subunit beta [Bacillus sp. m3-13] Length = 693 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 197/733 (26%), Positives = 352/733 (48%), Gaps = 73/733 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL EI EE+PAR + L + L+ + Y+++ Y TP RL + ++G Sbjct: 1 MSKRDFLFEIGLEEMPARFVTDSMNQLQEKVKAWLETNQLAYEDIHAYSTPRRLAILIEG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L + E GP G KA GF R GL K+ + Sbjct: 61 LVERQEDVTLEAKGPAKKVALTADGDWSKAAQGFTRGQGLTVED--IYFKEINGVEYVHV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +++L + + +PK+MRW+ ++RP+K ++ + Sbjct: 119 KKHVEGKETKEILSG-IASVATSLHFPKNMRWADED-----LRYVRPIKWLIALF----- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E++I +++ ++ ++ GHRF ++++ Y+ +L V+++ R+ AI Sbjct: 168 GEEVIPVEIAKVKSDRVSTGHRFLG-GQVELKDAGSYVEELLSNYVIVNATERKEAIRKQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + G + D+ LLEE+ LVE+ G+F+ +YL LPEE++ ++K +Q+ F Sbjct: 227 LSIIGEENGWNIPVDEALLEEVNNLVEYPTALFGTFESEYLTLPEEVLITSMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++ EG L F+ V N + + +GN +V+ ARL DA F K D+ + Sbjct: 287 VKSDEGTLLPYFVTVRNG-NHENLDNVARGNEKVLRARLSDAAFFSKEDEKLV------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---V 408 +D+ + +LD +VFH +IGT G++V R++ + +A++++ D Sbjct: 339 -------------IDEAIKKLD--KIVFHEEIGTTGDKVRRVQTIATDLAKVVNVDNETQ 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 V+RA + K DL + +V EFPELQG +G++YAV + E+ AI EH PR + Sbjct: 384 KHVERAASIYKFDLVSHMVYEFPELQGIMGEKYAVAKGESPVVAKAINEHYMPRSAEDQT 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 ++ + +S+++K+DT++ F+AI P+GS+DPYALRR GII+ IL L F Sbjct: 444 ASSDVGAILSISEKMDTIVGFFAIGVIPTGSQDPYALRRQASGIIQTILNKDWTFSLETF 503 Query: 529 IE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + +++++FF RLK L +R +R+D++EA+L +N+ + Sbjct: 504 MHSLVERYVEKGIAKKDTNEIMEDILVFFKLRLKNNLSERGVRYDIVEALLELPLENVCS 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 V + L + A ++ + S R+ I +S E+ L E E+ LY Sbjct: 564 TVKKAETLETKKNEADFKETMESLSRVCNIAKKA-----TLSTEVQENLLNQEQEQELYK 618 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + + + + + + L S+ I+ FFD ++V +D ++ NRL+L+ + Sbjct: 619 QFNSKKDLVLRAAEDQDFSLAYEELASLKPAIDAFFDNIMVMTEDEAIKANRLALMDDMA 678 Query: 690 NIILIVINVQKIV 702 +I I NV I+ Sbjct: 679 KVIAIFGNVNGII 691 >gi|313892678|ref|ZP_07826261.1| glycine--tRNA ligase, beta subunit [Veillonella sp. oral taxon 158 str. F0412] gi|313442769|gb|EFR61178.1| glycine--tRNA ligase, beta subunit [Veillonella sp. oral taxon 158 str. F0412] Length = 683 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 197/728 (27%), Positives = 331/728 (45%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL Sbjct: 1 MAKDLLFEIGAEEIPAGFMPNILGQLKQLAGTKLNDAHLPFESIETYGTPRRLALIVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + S E E GP G KA GF R GL + +D A Sbjct: 61 ADASAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVAD--LVVEDG----YIYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ ++P I + +PKSM W + ++RP++ ++ +L Sbjct: 115 TKTAGVPAKDIVSEMLPQLITGLNFPKSMHWGDLDA-----KFVRPVRWLVALL-----D 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 165 EEVIPVEFATVQSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 225 HDMAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L F+ V N + + GN RV+ ARL+DA F+ D+ Sbjct: 285 VGQDGKLLPMFLTVRNG-SDHSIEVVQAGNERVLRARLDDAKFFFNEDR----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 KPL R L +VF +G ++ R+ LG+ + Sbjct: 333 ---------KKPLIDRQDGL--TKIVFQEGLGNLADKTERLLKLGRVFGEECGLHEDAAV 381 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + +P Sbjct: 382 VLERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESPEVAEAIFEQYLPRFAGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L Sbjct: 442 QTEAGKVLSIIDKVDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLRPIF 501 Query: 530 ED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + FF RLK DR++ H +I+ +L ++ L Sbjct: 502 KASMELLNVDADKQEELLNQVEEFFTLRLKNIFLDREVPHHVIDLLLSNNELSVADAEGL 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L + + + R++ ++ K+ E + ++ L +AEK L+ S Sbjct: 562 VNSLLANRIDEN-VELVQAYTRMYNLV-----KDVEYTG-VNSDLLKEDAEKALFEAASK 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + Y + + + I FF+ V+V D ++ NRL L++ +++ Sbjct: 615 ASEASLAAWEAGDYAAVVAVPAILVPTINQFFEDVMVMDKDEAIKANRLQLVRLAYSVMA 674 Query: 694 IVINVQKI 701 I+ ++ + Sbjct: 675 IIGDISAL 682 >gi|325569855|ref|ZP_08145849.1| glycyl-tRNA synthetase beta subunit [Enterococcus casseliflavus ATCC 12755] gi|325156978|gb|EGC69146.1| glycyl-tRNA synthetase beta subunit [Enterococcus casseliflavus ATCC 12755] Length = 690 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 200/719 (27%), Positives = 330/719 (45%), Gaps = 75/719 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L + Y + Y TP RL +Y+ GL + E+ GP Sbjct: 15 PAHVVTPSMKQLQEKTAAFLDAHALPYTAIEAYSTPRRLAVYVTGLPEKQADTQEDVKGP 74 Query: 74 R-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T ++ K + + +VLK Sbjct: 75 AKKIALDEAGNWSKAAQGFVRGQGLTTDD--ITFRELKGVEYVYVTKHTQGQPTVEVLKG 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + I + +P +M W+ F +IRP+ I+ + E++I + +I G Sbjct: 133 -LQEVITSLTFPVTMHWADYD-----FEYIRPIHWIVALF-----GEQVIPFQILDIVTG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 + GHRF + D Y+ ++ V+ DP R+ I + + +A + D Sbjct: 182 RESKGHRFLG-EAVTFDHADDYLEKMKHQFVIADPSERQQMITSQINAIAQENNWRIDLD 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLLEE+ LVE+ F+G F++KYL +PEE++ ++K +Q+ F RT +G L FI Sbjct: 241 EDLLEEVTNLVEYPTAFVGDFEEKYLSVPEEVLVTSMKEHQRYFDVRTLDGELLPHFISA 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A +++GN +V+ ARLEDA F+ D+ +D Sbjct: 301 RNGDA-VKIDNVIKGNQKVLTARLEDAEFFYNEDKKL--------------------TID 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 + +L V FH KIG+ E++ R+ + + I + ++ + RA + K DL Sbjct: 340 HCVEKLKQ--VTFHEKIGSLYEKMQRVGLAAQIIGNTVGLTQEELTDLQRAAQIYKFDLV 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EFPELQG +G++YA++Q E + AI EH P +P +KI +++ADKL Sbjct: 398 TNMVGEFPELQGIMGEKYALIQGEKPTVAQAIREHYMPISAEGELPQSKIGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 D+L+ F+A++ PSGS DPYALRR T GIIRI+ E + P +Q E Sbjct: 458 DSLLAFFAVDMVPSGSNDPYALRRQTYGIIRILAEKRWYFPFAQLQEEIREAINAQPEIF 517 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + + F RL+ +L ++ RHD+IEA+L ++ T+ + + L E Sbjct: 518 GIQLAAGQEQVTDFVKSRLRQFLLSKNTRHDVIEAVLGARQADISTLFETAQMLREHLQD 577 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + + R+ + E + I P ++E LY + Sbjct: 578 TDFKPSMEALTRVINLAKKAELEQ----AAIDPALFENDSETALYEAVLTVENKFPHQTM 633 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + Y L ++ IE +FDQ +V V+D ++R NR +LL I + L V ++ ++ Sbjct: 634 EENYQS----LVALRPLIEAYFDQTMVMVEDEQIRRNRFALLDKIAKMSLAVASLDALI 688 >gi|76811609|ref|YP_332294.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 1710b] gi|134279466|ref|ZP_01766178.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 305] gi|167901385|ref|ZP_02488590.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei NCTC 13177] gi|254196673|ref|ZP_04903097.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei S13] gi|254261736|ref|ZP_04952790.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1710a] gi|76581062|gb|ABA50537.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1710b] gi|134248666|gb|EBA48748.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 305] gi|169653416|gb|EDS86109.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei S13] gi|254220425|gb|EET09809.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1710a] Length = 699 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 208/714 (29%), Positives = 337/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + + L +I +Y TP RL + ++ + +PE+ E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 + P GA + L + G +S +++ K + + P + D Sbjct: 79 VLPVSVALDAQGAPSAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HGDRIVPVAAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + ++ + Y L E VL RR I A+A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIRHANAYADTLREKGRVLAHFAQRRETIRTQLE--ANANGDR 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+Q RV R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSQLARVERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFIDRLRGLLRERGYTAGEIDAVLSLNPTRLDDIVARLNAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P + AEK L +++ +Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSESGANGAVQPALFVEAAEKALAEQLAEVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FFD V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALTALAALRAPVDAFFDGVMVNADDPALRANRLALLSALHQQMNCVADISKL 697 >gi|126439880|ref|YP_001057753.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 668] gi|167718173|ref|ZP_02401409.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei DM98] gi|167917629|ref|ZP_02504720.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei BCC215] gi|217419517|ref|ZP_03451023.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 576] gi|254187677|ref|ZP_04894189.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|126219373|gb|ABN82879.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 668] gi|157935357|gb|EDO91027.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|217396821|gb|EEC36837.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 576] Length = 699 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 209/714 (29%), Positives = 338/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + + L +I +Y TP RL + ++ + +PE+ E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 + P GA + L + G +S +++ K + + P + D Sbjct: 79 VLPVSVALDAQGAPSAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HGDRIVPVAAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + ++ + Y L E VL RR I A+A G + Sbjct: 192 DAGDTTLGHRFLSDGLVAIRHANAYADTLREKGRVLAHFAQRRETIRTQLE--ANANGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+Q RV R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSQLARVERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFIDRLRGLLRERGYTAGEIDAVLSLNPTRLDDIVARLNAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P + AEK L ++D +Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSESGANGAVQPALFVEAAEKALAEQLADVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FFD V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALTALAALRAPVDAFFDGVMVNADDPALRANRLALLSALHQQMNCVADISKL 697 >gi|58584021|ref|YP_203037.1| glycyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428615|gb|AAW77652.1| glycyl-tRNA synthetase beta chain [Xanthomonas oryzae pv. oryzae KACC10331] Length = 745 Score = 538 bits (1387), Expect = e-150, Method: Composition-based stats. Identities = 193/781 (24%), Positives = 332/781 (42%), Gaps = 118/781 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G+ + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPDLAQAFFDGVLSGLEKRGIAVTRGAAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P ++L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGGHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++I +L + IT GHRF + + Y+ L A VL+DP+ RR I Sbjct: 172 ---GNEVIPAELLGVRGDRITRGHRFMHEGAVSLAVPGDYVEALRAAHVLVDPDARRTRI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVEAAAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGTLTEQFIGIANIQSKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L L V + AK+GT ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLQAMGDGL--ASVTYQAKLGTVADKVARVAALAEVIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI++ +PR +++ Sbjct: 386 LQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDQAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L++ Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLTEL 505 Query: 529 IED------------------------------------------------QNLILFFHD 540 ++ ++ F D Sbjct: 506 LKKAVGLVNSALAWSQASKQQTAVEAAKVQGVHVAERQSGGLWVPNVEATSAEILDFILD 565 Query: 541 RLKLYLHDRDIRHDLIEAILRPEN--------------------DNLLTIVDLIKHLNEF 580 RL+ Y D+ + A+ + +L I + F Sbjct: 566 RLRGYYADKGVPATHFNAVAALFSGTSEAVTAPTGVGAHPGATHGSLYDFDRRIDAIGIF 625 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + + KRI IL K EI +I L AE+ L + + Sbjct: 626 ATLPEAQALAAANKRIRNILR---KVEGEIPGDIDTALLREPAEEALAEAVEAAIGATGD 682 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ Y + L + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ Sbjct: 683 ALHRHDYVAVLARLARLRPQVDAFFDGVMVNAEDPQLRANRLALLKKLGDRLGSVAAIEH 742 Query: 701 I 701 + Sbjct: 743 L 743 >gi|282850265|ref|ZP_06259644.1| glycyl-tRNA synthetase, beta subunit [Veillonella parvula ATCC 17745] gi|282579758|gb|EFB85162.1| glycyl-tRNA synthetase, beta subunit [Veillonella parvula ATCC 17745] Length = 683 Score = 538 bits (1386), Expect = e-150, Method: Composition-based stats. Identities = 197/728 (27%), Positives = 331/728 (45%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL Sbjct: 1 MAKDLLFEIGAEEIPAGFMPNILGQLKQLAETKLNDAHLPFESIATYGTPRRLALIVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + S E E GP G KA GF R GL + +D A Sbjct: 61 ADTSAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVAD--LVVEDG----YIYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ ++P I + +PKSM W + ++RP++ + +L Sbjct: 115 TKTAGVPAKDIVTDMLPQLITGLNFPKSMHWGNLDA-----KFVRPVRWFVALL-----D 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 165 EEVIPVEFATVKSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 225 HDMAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L F+ V N + + GN RV+ ARL+DA F+ D+ Sbjct: 285 VDQEGKLLPMFLTVRNG-SDYSIEVVQAGNERVLRARLDDAKFFFNEDR----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 KPL R L +VF +G ++ R+ LG+ + Sbjct: 333 ---------KKPLIDRQDGL--TKIVFQEGLGNLADKTERLLKLGRVFGEECGLHEDAAV 381 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + +P Sbjct: 382 VLERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESEEVAEAIFEQYLPRFAGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L Sbjct: 442 QTEAGKVLSIIDKVDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLRPIF 501 Query: 530 ED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + FF RLK DR++ H +I+ +L ++ L Sbjct: 502 KASMELLNVPAEKQDELLDQVEEFFTLRLKNIFLDREVPHHVIDLLLSNNELSVADAEGL 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L + + + R++ ++ K+ E + ++ L +AEK L+ + Sbjct: 562 VNALLANRIDEN-VELVQAYTRMYNLV-----KDVEYTG-VNSDLLKEDAEKALFEAATK 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + Y + + ++ I FF+ V+V D ++ NRL L++ +++ Sbjct: 615 ASEASSAAWEAGDYDAVVAVPATLVPAINKFFEDVMVMDKDEAIKANRLQLVRLAYSVMA 674 Query: 694 IVINVQKI 701 I+ ++ + Sbjct: 675 IIGDISAL 682 >gi|53718310|ref|YP_107296.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei K96243] gi|53725037|ref|YP_102052.1| glycyl-tRNA synthetase subunit beta [Burkholderia mallei ATCC 23344] gi|67641460|ref|ZP_00440238.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei GB8 horse 4] gi|121600887|ref|YP_994024.1| glycyl-tRNA synthetase subunit beta [Burkholderia mallei SAVP1] gi|124386095|ref|YP_001028312.1| glycyl-tRNA synthetase subunit beta [Burkholderia mallei NCTC 10229] gi|126448019|ref|YP_001081956.1| glycyl-tRNA synthetase subunit beta [Burkholderia mallei NCTC 10247] gi|167002699|ref|ZP_02268489.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei PRL-20] gi|167737204|ref|ZP_02409978.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 14] gi|167814335|ref|ZP_02446015.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 91] gi|167822812|ref|ZP_02454283.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 9] gi|167844386|ref|ZP_02469894.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei B7210] gi|167909614|ref|ZP_02496705.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 112] gi|226196695|ref|ZP_03792275.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|254176698|ref|ZP_04883355.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei ATCC 10399] gi|254203737|ref|ZP_04910097.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei FMH] gi|254208712|ref|ZP_04915060.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei JHU] gi|254296211|ref|ZP_04963668.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 406e] gi|254360235|ref|ZP_04976505.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei 2002721280] gi|52208724|emb|CAH34660.1| putative glycyl-tRNA synthetase beta chain [Burkholderia pseudomallei K96243] gi|52428460|gb|AAU49053.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei ATCC 23344] gi|121229697|gb|ABM52215.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei SAVP1] gi|124294115|gb|ABN03384.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei NCTC 10229] gi|126240889|gb|ABO03982.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei NCTC 10247] gi|147745249|gb|EDK52329.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei FMH] gi|147750588|gb|EDK57657.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei JHU] gi|148029475|gb|EDK87380.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei 2002721280] gi|157805848|gb|EDO83018.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 406e] gi|160697739|gb|EDP87709.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei ATCC 10399] gi|225931226|gb|EEH27233.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|238522400|gb|EEP85844.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei GB8 horse 4] gi|243061638|gb|EES43824.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei PRL-20] Length = 699 Score = 538 bits (1386), Expect = e-150, Method: Composition-based stats. Identities = 209/714 (29%), Positives = 337/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + + L +I +Y TP RL + ++ + +PE+ E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 + P GA + L + G +S +++ K + + P + D Sbjct: 79 VLPVSVALDAQGAPSAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HGDRIVPVAAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + ++ + Y L E VL RR I A+A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIRHANAYADTLREKGRVLAHFAQRRETIRTQLE--ANANGDR 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+Q RV R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSQLARVERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFIDRLRGLLRERGYTAGEIDAVLSLNPTRLDDIVARLNAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P + AEK L ++D +Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSESGANGAVQPALFVEAAEKALAEQLADVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FFD V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALTALAALRAPVDAFFDGVMVNADDPALRANRLALLSALHQQMNCVADISKL 697 >gi|237746627|ref|ZP_04577107.1| glycyl-tRNA synthetase subunit beta [Oxalobacter formigenes HOxBLS] gi|229377978|gb|EEO28069.1| glycyl-tRNA synthetase subunit beta [Oxalobacter formigenes HOxBLS] Length = 694 Score = 538 bits (1386), Expect = e-150, Method: Composition-based stats. Identities = 194/714 (27%), Positives = 340/714 (47%), Gaps = 62/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + K A+ + + L+++ + + Y TP RL + + + SP+K I ++ Sbjct: 15 PPKALTKLADSFAGTIEKSLRQDDFLTDASKKTVYATPRRLAITITNVRDVSPDKPIRQK 74 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIK-KDPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + + I ++ K D + Sbjct: 75 VLPVSVALDADGKPTAPLKKKLAALNIPDIDISTLEVARDGKNDCLFYNYTASGIPLAAS 134 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ V A ++P PK M + ++RP+ I+ + E ++ + L + Sbjct: 135 LQKAVEKAAHELPVPKMMTYQRPDG--ETVEFVRPVHEIVAM-----HGENVVPIALLGL 187 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G T+GHRF + I + + D+Y LE ++ + R++ I A G + Sbjct: 188 SAGRTTHGHRFLSQGEIGILAADYYAVTLETRGKIIPGFQARKDRIRAMLIE--KAKGDK 245 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 ++ + LL+E+ LVEW V+ F++ +L +P+E + LT++TNQK F EG L + Sbjct: 246 VLMPESLLDEVTALVEWPIVYECHFEESFLEVPQECLILTMQTNQKYFALTDAEGRLRSR 305 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSN++ + I+ GN RV+ RL DA F+++D+ Sbjct: 306 FLIVSNMET-NTPQRIISGNERVIRPRLSDARFFFEQDK--------------------K 344 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 K L++R+ L +VV+H K+GT +R++R+R+L IA + D LVDRA L KADL Sbjct: 345 KRLEERLPGL--ANVVYHNKLGTLAQRMARVRLLAVFIAGKMGIDTQLVDRAARLVKADL 402 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 TE+V EFPELQG +G YA E+ A EH +PR + +P ++LADK Sbjct: 403 LTEMVGEFPELQGIMGTYYARHDGEHEEVALACTEHYQPRFAGDVLPATPTGTAIALADK 462 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 L+TL W I +P+G +DP+ALRR LGI+RI++E K+ + L + + + Sbjct: 463 LETLAGIWGIGLQPTGDRDPFALRRHALGILRILIEKKLPLSLRKMLAEAVGILSTNATM 522 Query: 532 ----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + ++ F +RL+ L DR I+A+L D ++D ++ + F + + Sbjct: 523 TDPTEGVLAFVMERLRGLLRDRGYSPAEIDAVLAQNPDRFDNLIDRLEAVRAFAAMPESV 582 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL KK+ + ++ L ++EK+L+A ++ Y Sbjct: 583 SLAAANKRITNIL----KKSDINAGDVHTDILAEDSEKKLFADMTVVKPEADRKFAAGDY 638 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + + ++ FF V+V DD +R+NR++LL+ + ++ V ++ K+ Sbjct: 639 TGTLKTLAQLRDDVDAFFTNVMVMTDDTRLRNNRIALLKQLHAMMNQVADISKL 692 >gi|295675499|ref|YP_003604023.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1002] gi|295435342|gb|ADG14512.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1002] Length = 699 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 202/714 (28%), Positives = 332/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + ++ TP RL + + + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGEPSFERFATPRRLAVTIHNVRAVAPEKHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGL-QTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 + P + G + L + G + + K + + P + D Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFTVNDLERAQDGKAEAFFLRYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S+ ++RP+ + + E+I+ + I Sbjct: 139 LQAALDETLGKLPIPKVMTYQRPDG--SSVQFVRPVHRLTAL-----HGEEIVPVSALGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 + T GHRF + +++Q Y LE V+ R+ AI + A+ + Sbjct: 192 DADDTTLGHRFLSEGFVQIQHAQSYAETLEHRGRVIASFARRKEAIRSQLLAHAAED--K 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYECRFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ + IV+GN RVV RL DA F+ +D+ Sbjct: 310 FLIVSNIETA-TPVEIVEGNERVVRPRLADAKFFFTQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ +RV R+ L IA + ADVA RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSALQRVERLEGLAGAIAAMTGADVARATRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT + V+LADK Sbjct: 407 ITDMVGEFPELQGTMGTYYARHDGEQEEVALACSEHYQPRFSGDALPTTETGTVVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+TL+ W I +P+G KDP+ALRR LG++RI++E ++++ Sbjct: 467 LETLVGIWGIGLQPTGEKDPFALRRHALGVLRILIEKQLNVDFVDLLRIAYAQFAGMPNV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + F DRL+ L +R I+A+L L IV + + EF S A+ Sbjct: 527 ADATDAIYEFSMDRLRGLLRERGYAAGEIDAVLALNPTRLDDIVARLDAVREFASLAEAA 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L AEK L A + +Q + + Y Sbjct: 587 SLAAANKRISNILK---KSEGVTNGGVQPGLLTEAAEKALNAQLEQVTPRVQSQLAVRDY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 644 TGALTALAALREPVDTFFNDVMVNSEDPALRANRLALLGALHQQMNCVADISRL 697 >gi|306820784|ref|ZP_07454409.1| glycyl-tRNA synthetase beta subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551174|gb|EFM39140.1| glycyl-tRNA synthetase beta subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 687 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 219/725 (30%), Positives = 358/725 (49%), Gaps = 65/725 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D LLE+ +EEIPAR + + L LKE + + + TP R +++ LS Sbjct: 3 KDLLLELGTEEIPARFISSTKKSMKSFLEKRLKELRISFDTINIKSTPRRFSIFINKLSD 62 Query: 62 HSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 E +EE GP KA+ GFL+S + +K + + Sbjct: 63 KQTESVEEIKGPSRKIAFDENNNPSKALAGFLKSKNVSIDDIKFVK--NGNEEYVYVEKK 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + LK I I + +PK MRW + +IRP++ ILC+ E Sbjct: 121 LESLDTKSYLKEIFEQMIDNLSFPKPMRWG-----GNKIKFIRPIRWILCLYGNEVP--- 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +L++ + N+T GHRF I+V S++ Y + LEE V+LD E RR I + + Sbjct: 173 --ELEMFNLKASNLTRGHRFLGKSYIEVPSIEEYEKILEENYVILDDEKRRELIRSQITK 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A + +ED+DLLEE+ +VE+ G F ++YL LP+E I +K +Q+ F Sbjct: 231 IAEDLNSIYMEDEDLLEEVNYIVEYPTALYGQFKEEYLKLPKETIITPMKEHQRYFPVLD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L N FI V N + +GN +V+ ARL DA F+++D Sbjct: 291 KSGNLVNKFITVRNG-NDYMIENVRKGNEKVLDARLSDAKFFYEQDT------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 SK L++ + RL+ +V+H K+GT +++ R++ + K A+L++AD + RA Sbjct: 337 -------SKKLEEYVERLNT--IVYHEKLGTMHDKMQRLQSISKSFAKLLNADESDAQRA 387 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL T +V EF ELQG +G YA + E DAI EH PR + V +K+ Sbjct: 388 AYLCKADLTTSMVFEFTELQGIMGYYYANISGEKEEISDAIVEHYLPRFSGDEVAKSKLG 447 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 I +SLADK DT+ F+A+ KP+GS+DPYALRR LGI+ ++ENK+ + + + I+ Sbjct: 448 IVLSLADKFDTMAGFFAVGIKPTGSQDPYALRRTALGILNTLIENKLLLSMEELIKVALN 507 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ F RLK L D+ IR+D+++A++ + ++ + L Sbjct: 508 EYKDKIEFNLEEVYLEILDFMKLRLKNILLDKKIRYDVVDAVI-DDISSVFRTFEKAVQL 566 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 ++ S++ L + R++ I K + +I Q EK++Y+ Sbjct: 567 EKWLSNSDNIPNLNTFIRVYNI-----SKEIATNEKIDTQLFEQNEEKQVYSKYLKILPV 621 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 ++ +Y + + L S+ + I FFD V++ V+D ++R+NRL L+ +K++I + + Sbjct: 622 VENLNSELKYIESLNELSSMTKDINDFFDNVMIMVEDDKIRNNRLLLVNALKSMIFEIAD 681 Query: 698 VQKIV 702 KIV Sbjct: 682 FSKIV 686 >gi|312797215|ref|YP_004030137.1| glycyl-tRNA synthetase beta chain [Burkholderia rhizoxinica HKI 454] gi|312168990|emb|CBW75993.1| Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) [Burkholderia rhizoxinica HKI 454] Length = 700 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 198/718 (27%), Positives = 334/718 (46%), Gaps = 66/718 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGV------IYQNMRQYWTPHRLFLYLKGLSPHSPEKI 67 P + + + + L+ L + + + TP RL + ++ + +P++ Sbjct: 17 PPKALARLSNAFANGLVERLAARDLIDVADGGSPSFEPFGTPRRLAVTIRNVRAVAPQRQ 76 Query: 68 E-ERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRL 119 E++ P G + L + G + Q+++ K + + P Sbjct: 77 VREKVLPVSVALDANGQPSAPLAKKLAALGFPDMPLTQLERAMDGKTEAFFLNYAAPGVT 136 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 +ED L+ + + K+P PK M + + ++RP ++ + ++I+ + Sbjct: 137 LEDGLQAALDETLAKLPIPKVMTYQRPDG--TNVQFVRPAHRLVAL-----HADRIVPVS 189 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASA 238 + +T GHRF + + + Y R L + V+ + R+ AI A A Sbjct: 190 ALGLDADAVTLGHRFLSEGHVAILHAHDYARTLEQRGKVIASMQARKEAIRAQLLERAGA 249 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 ++ + LL+E+ LVEW V+ FD +L +P+E + LT++TNQK F G Sbjct: 250 D--HVLMPEALLDEVNALVEWPIVYECRFDDAFLQVPQECLILTMQTNQKYFALTDAGGK 307 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L + F++VSN+Q D IV GN RVV RL DA F+++DQ Sbjct: 308 LRSRFLVVSNVQT-DTPQQIVLGNERVVRPRLADAKFFFEQDQ----------------- 349 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 K L+QR+ L +VV+H K+G+Q +RV R+ L IA + D RA L+ Sbjct: 350 ---KKTLEQRVPLL--ANVVYHNKLGSQLQRVERLEALAAVIAPSVGVDAQRAARAARLA 404 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P+ IS V+ Sbjct: 405 KADLLTDMVGEFPELQGTMGTYYARHDGEPDDIALACSEHYRPRFAGDALPSTAISTAVA 464 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 LADKL+TL+ W I +P+G KDP+ALRR LG++RI+LE ++ + L + Sbjct: 465 LADKLETLVGIWGIGLQPTGEKDPFALRRHALGVLRIVLEKQLPLDLIDLLRHAYAQFAA 524 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L FF DRL+ L +R + ++A+L + I + + EF + Sbjct: 525 QPQVADPTSALHGFFIDRLRGLLRERGYDANEVDAVLSQNPTRIDDITGRLDAVREFATL 584 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KRI IL KK+ + + + L+ AE+ L+ + + +Q + Sbjct: 585 PEAASLAAANKRITNIL----KKSDGAAQHVETKLLMEPAERALFEQLHNVTPTVQGRLS 640 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + Y L S+ + ++ FF+ V+VN DD +R NRL LL + ++ V ++ K+ Sbjct: 641 SRDYTGALSALASLRDAVDTFFNDVMVNADDAALRANRLGLLARLHELMHCVADISKL 698 >gi|288555749|ref|YP_003427684.1| glycyl-tRNA synthetase subunit beta [Bacillus pseudofirmus OF4] gi|288546909|gb|ADC50792.1| glycyl-tRNA synthetase subunit beta [Bacillus pseudofirmus OF4] Length = 693 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 204/733 (27%), Positives = 343/733 (46%), Gaps = 73/733 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL E+ EE+PAR + L + LKEE + + + + TP RL +Y+ G Sbjct: 1 MSKRDFLFELGLEELPARFVTDSMNQLKNKVSDWLKEERLDFDAIEAFSTPRRLAIYITG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P+ E GP G KA GF R G+ K+ K + A Sbjct: 61 LKEKQPDVEAEAKGPAKKIAQDEEGNWSKAALGFARGQGVTADD--LFFKELKGVEYVYA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + ++L + + + +PK+MRW+ + RP++ ++ + Sbjct: 119 KTFTAGKKTVELLPA-LKSIVTSMHFPKNMRWNQYD-----LRFARPIQWMVALY----- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+II ++ ++ N T GHRF +K+ + Y L V+ PE R+ AI N Sbjct: 168 GEEIIPFEITDVKTSNATRGHRFLG-EEVKLDTPADYETALLGQYVIARPEERKRAIRNQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + G + D+DLLEE+ LVE+ G++D +L +P+E++ +++ +Q+ F Sbjct: 227 IESMTEGNGWVIPIDEDLLEEVTNLVEYPTALSGTYDDAFLEIPKEVLITSMREHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L F+ V N + +GN +V+ ARL DA F+ DQ Sbjct: 287 VEDTEGKLLPHFVTVRNGD-HQHLENVAKGNEKVLRARLSDAAFFYAEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL- 410 ++ + RL+ ++V+H +G+ ++V R+R I++L+ D Sbjct: 338 ------------KIEDALGRLE--NIVYHEDLGSIADKVRRVRKGVTSISKLVALDSNEQ 383 Query: 411 --VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 DR ++K DL T++V EFPELQG++G+ YA L E + I+EH P+ + Sbjct: 384 EVADRIAEIAKFDLVTQMVYEFPELQGRMGEVYAGLIGEPVEVTVGIKEHYMPKFAGDKS 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ K S VSLADKLDT++ +AI P+GS+DPYALRR GI+++I + D+ + + Sbjct: 444 PSTKASTVVSLADKLDTIVTCFAIGLIPTGSQDPYALRRQAAGIVQMIADYDFDVEIDEL 503 Query: 529 IE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ FF R+K L ++ IR+D+I+A+L E ++ T Sbjct: 504 VAASLDVSEERGLLKRDREDITKEVMEFFSLRIKNALQEKGIRYDVIDAVLTSEAIHVST 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + L + S +K + + R+ I E ++EI P+ E EK LY Sbjct: 564 TIKKAELLMDQVSQPAFKKTVEALSRVTNIAKKA-----ETAVEIKPELFEKEEEKELYR 618 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +Q ++ + + L SI I +FD ++V +D +V+ NRL+ + + Sbjct: 619 HYESAQKEVQIALANGDASRAFKSLQSIEPSIHAYFDHIMVMAEDEKVKRNRLAQMLELS 678 Query: 690 NIILIVINVQKIV 702 +I N Q IV Sbjct: 679 AVIRAFANFQSIV 691 >gi|322436213|ref|YP_004218425.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX9] gi|321163940|gb|ADW69645.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX9] Length = 693 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 201/723 (27%), Positives = 337/723 (46%), Gaps = 54/723 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKG 58 M DFL EI EE+PARM +A +L +GLL+ E ++ + + Y TP RL + +KG Sbjct: 1 MADFLFEIGLEEVPARMIAQAEAELLKRTVGLLERERLVAGAVEAKSYSTPRRLAVVVKG 60 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE LGP G A F + G++ + + KG+ A Sbjct: 61 VLARQEDVSEEVLGPATKIAFKDGQPGPAAVAFAKKNGVEVSALRVV--TNAKGEYVAAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K R VL +P I + W K+M W ++RP++ ++ +L Sbjct: 119 SVKAGRSAAAVLAEELPKEIAGIYWAKNMYWRAGR----PERFVRPVRWLVALL-----G 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I+ + G +TYGHR + Y+ +L +A V++D E RR+ I Sbjct: 170 DEIVPVSFGGYEAGRVTYGHRVLFGDAAIAVTPASYVEELAKASVMVDVEGRRHVIRKAL 229 Query: 233 HRLA-SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 ++ +A G ED L++++ + EW V +G F+K+YL LPEE++ ++ +Q F Sbjct: 230 DKVCRTAEGTRWREDHGLVDKMTHMTEWPSVILGGFEKEYLALPEEVLVTVMRDHQNYFA 289 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIV-QGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + +G LA F+ V N A + G A++ GN RV+ AR DA FW+ DQ Sbjct: 290 VESADGKLAPHFLAVLNTVADETGQAVIRHGNERVLRARFNDARFFWEFDQRV------- 342 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVA 409 PL++R+A L+ +V F +G+ + R+ L +A + D+ Sbjct: 343 -------------PLEERVALLE--NVTFQKDLGSYAAKSVRVGALALSLAATVPGVDLE 387 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + A L+K DL TE+V+EF ELQG++G YA Q + C+AI + +P + +P Sbjct: 388 ALKAAARLAKTDLTTELVKEFTELQGEVGGLYAEAQGVAQAACNAIYDQYRPVSTEDRIP 447 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ-- 527 +++ADK DT+ + + +P+GSKDP+ALRRA GI++I+ E + + Q Sbjct: 448 RTVEGQLLAMADKADTIAGMFGLGLEPTGSKDPFALRRAANGIVKILGEGATGLGIGQVV 507 Query: 528 -------FIEDQNLILFFHDRLKLYLHD-RDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + L +FF +RL+ YL + + +D++ A+L D++ V + + Sbjct: 508 RAAVGDNLVLVRKLEVFFAERLEFYLREAKGQAYDVVAAVLGAGADDVRDAVARAEAVTA 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 S + KR+ ILA +K + L AE L ++ + Sbjct: 568 VRGSEDFAAVSAAFKRMKNILAQAAEKGIAPGTAVDISLLKDGAELALAEKAAEVKPEVA 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y +L+ ++ + FF+ V+V D VR NRL+LL + + Sbjct: 628 ALRGAHEYRGALELIATLRPQVNAFFEAVMVMDPDEAVRANRLALLGKVLGDFGGIAEFS 687 Query: 700 KIV 702 +IV Sbjct: 688 EIV 690 >gi|294011764|ref|YP_003545224.1| glycyl-tRNA synthetase beta chain [Sphingobium japonicum UT26S] gi|292675094|dbj|BAI96612.1| glycyl-tRNA synthetase beta chain [Sphingobium japonicum UT26S] Length = 763 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 255/792 (32%), Positives = 367/792 (46%), Gaps = 127/792 (16%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ EEIPARMQ KA+EDL+ + L + G+ +++ + TP RL L + L Sbjct: 6 MTDFLLELRCEEIPARMQLKASEDLARLFTEELAKSGLKPESIDSFVTPRRLALIARNLP 65 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GPR A +A++GFLR TGL + V+ A + KP R Sbjct: 66 LETAAVSEEHKGPRTSAPAQALEGFLRKTGLTQDQL------EDRDGVWFATVNKPGRAS 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 VL VP I+ PWPKSMRW + W+RPL+ I+ IL E+++D+++ Sbjct: 120 AQVLAEAVPAVIRAFPWPKSMRWGKASQTTESLRWVRPLQGIVAIL-----GEELVDIEI 174 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G T GHRFH P I + Y L V++ R++ I A A+A G Sbjct: 175 EGIKSGYATLGHRFHHPGEITIGGAHDYAEKLRACHVIVSHRERQSIIEAKAAEAAAAHG 234 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ++EDK L+ E GL EW +G FD +L +P E+I+LT++ NQK FV R G LA Sbjct: 235 YTVIEDKGLVAENAGLTEWPVPLLGDFDPAFLEVPPEVIQLTLRINQKYFVLRDASGKLA 294 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI +NI+A DGGAAIV GN +V+AARL DA FW++D+ Sbjct: 295 PAFICTANIEAKDGGAAIVAGNRKVLAARLSDARFFWEQDR------------------- 335 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---------- 410 L+ +L+ + FH K+GT ++V R+ L + + + Sbjct: 336 -KTKLEDHAKKLER--ITFHEKLGTVADKVERVAKLARWLVEEGIVQSNKEGQQPETELF 392 Query: 411 --VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A L+KADL TE+V EFPELQG +G YA + + + DAI +H KP G + V Sbjct: 393 NAALSASRLAKADLVTEMVGEFPELQGVMGGYYARAEGLSGAVADAIRDHYKPIGQSDEV 452 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 PT ++ VSLADKLD ++ F+AI+EKP+GSKDP+ALRRA LGI+ +I +++I +P S+ Sbjct: 453 PTAPATVVVSLADKLDNILAFFAIDEKPTGSKDPFALRRAGLGILSLIGQSEIRLPFSKI 512 Query: 529 I----------------EDQNLILFFHDRLKLY-----------------LHDRDIRH-- 553 ED F HD + + D RH Sbjct: 513 GPQYLALLAKQIASRGLEDTGYSSFAHDVYQDWLAGRPLTRNEDGSISRMNDDGGSRHYS 572 Query: 554 -----------DLIEAILRPENDNLLTIVDLIK--------------------------- 575 D+ EA+++ D L + D +K Sbjct: 573 QELAPLIRYAADVHEAVMKSAPDVLPFLADRLKVQQKEAGVRHDLIDAVFALGGEDDLVR 632 Query: 576 ------HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 L F ++ G L KR IL E E + Y AE L A Sbjct: 633 LLARVKALQSFVATDDGTNLLAGYKRAANILKKE---GVETAEATQLTYTPEPAEAALIA 689 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + ++ + + L ++ PI+ FF+ V VN D R RL+LL ++ Sbjct: 690 ALDAAEPRATAAVAAEDFEGAMAALATLRAPIDAFFESVTVNDADETKRSARLALLSRVR 749 Query: 690 NIILIVINVQKI 701 + V + KI Sbjct: 750 KAVHAVADFSKI 761 >gi|300310051|ref|YP_003774143.1| glycyl-tRNA synthetase beta chain protein [Herbaspirillum seropedicae SmR1] gi|300072836|gb|ADJ62235.1| glycyl-tRNA synthetase beta chain protein [Herbaspirillum seropedicae SmR1] Length = 706 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 194/731 (26%), Positives = 348/731 (47%), Gaps = 62/731 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKGLS 60 L+E+ +EE+P + K + + + L+ G Y TP RL + + + Sbjct: 4 TLLVELVTEELPPKALAKLGDAFATGIFNGLQSRGYLDADATATAYATPRRLAVSITQVC 63 Query: 61 PHSPEKIE-ERLGP------RVGAGK----KAIDGFLRSTGLQTIS-DCQIKKDPKKGDV 108 SP+K E++ P G K + STG I+ D + K + Sbjct: 64 AASPDKSIREKVLPVSVALDAEGRPSAPLVKKLAALAASTGATVITPDQLERAQDGKAES 123 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWST--THSPISAFSWIRPLKSILCIL 166 + + L+ + ++ K+P PK M + + ++RP ++ +L Sbjct: 124 FFYTYTAKGSALAVGLQAALDESLSKLPIPKVMSYQRQFGRAAGETVHFVRPAHYLVALL 183 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRR 225 + ++ ++ + G T GHRF + +++ + D Y+ L ++ V+ RR Sbjct: 184 GND-----VVPINTLGLDAGRTTLGHRFLSAGALQIAAPDAYVESLAQQGNVIASFTERR 238 Query: 226 NAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 I A A +++ + LL+E+ LVEW V+ F+ ++L +P+E + LT++T Sbjct: 239 EKIRAALLAKAGAD--QVLMPEALLDEVTALVEWPVVYECKFEDEFLAVPQECLILTMQT 296 Query: 286 NQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 NQK F G L + F++VSN++ + I+ GN RVV RL DA F+++D+ Sbjct: 297 NQKYFALTDANGRLRSRFLIVSNLETAH-PEHIIGGNERVVRPRLSDAKFFFEQDK---- 351 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 K L +R+ +L +VV+H K+G Q +R R++ L KIA L+ Sbjct: 352 ----------------KKTLAERVPQL--ANVVYHNKLGNQLQRTERVQALAGKIASLLG 393 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 DV L +R +L+KADL T++V EFPELQG +G YA E A EH +PR Sbjct: 394 GDVKLAERGALLAKADLLTDMVGEFPELQGIMGTYYARHDGEADEVALAASEHYQPRFAG 453 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +PT V+LADKL+TL+ W I +P+G KDP+ALRR LG++R+++E ++ + L Sbjct: 454 DALPTTATGTAVALADKLETLVGIWGIGLQPTGDKDPFALRRHALGVLRMLVEKRLPLSL 513 Query: 526 SQFIE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + ++ ++ F +DRL+ L +R + +EA++ + + L + Sbjct: 514 TALLDAATGLFAGNANFKDPRADVQAFIYDRLRGLLRERGFAQNEVEAVVAQQPEVLDNV 573 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 V+ ++ + F + + E + KRI IL E + + L AE+ L+A Sbjct: 574 VERLQAVQAFAALPEAEALAAANKRITNILKKIEGVAIDAHGAVQESLLQEAAEQGLFAA 633 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + ++ + + L + + ++ FF+ V+VN +D ++R NR +LL + Sbjct: 634 MQTTRPQVEAAYAKGDFAGALKALAQLRQNVDAFFNDVMVNAEDEQLRKNRQALLAALHG 693 Query: 691 IILIVINVQKI 701 ++ V ++ K+ Sbjct: 694 MLNQVADISKL 704 >gi|167892900|ref|ZP_02480302.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 7894] Length = 699 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 208/714 (29%), Positives = 337/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIEE-R 70 P + + + + + L +I +Y TP RL + ++ + +PE+ + Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVRGK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 + P GA + L + G +S +++ K + + P + D Sbjct: 79 VLPVSVALDAQGAPSAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HGDRIVPVAAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + ++ + Y L E VL RR I A+A G + Sbjct: 192 DAGDTTLGHRFLSDGLVAIRHANAYADTLREKGRVLAHFAQRRETIRTQLE--ANANGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+Q RV R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSQLARVERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFIDRLRGLLRERGYTAGEIDAVLSLNPTRLDDIVARLNAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P + AEK L ++D +Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSESGANGAVQPALFVEAAEKALAEQLADVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FFD V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALTALAALRAPVDAFFDGVMVNADDPALRANRLALLSALHQQMNCVADISKL 697 >gi|264680350|ref|YP_003280260.1| glycyl-tRNA synthetase subunit beta [Comamonas testosteroni CNB-2] gi|262210866|gb|ACY34964.1| glycyl-tRNA synthetase, beta subunit [Comamonas testosteroni CNB-2] Length = 704 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 207/730 (28%), Positives = 355/730 (48%), Gaps = 61/730 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN---MRQYWTPHRLFLYLKG 58 + L+E++ EE+P + K + + ++ LK +G++ + + Y +P RL ++ Sbjct: 4 SNLLVELFVEELPPKALQKLGDAFAAVIFEQLKAQGLLASSESRLTAYASPRRLAAHITE 63 Query: 59 LSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYL 110 + P + +K + ++L P G A+ L + G + +K+ K + Sbjct: 64 VLPQAEDKAVSQKLMPVSVALDAEGKPTAALLKKLAALGADESAVAALKRQGEGKAEALF 123 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 L+ D ++ + A+ K+P PK MR+ ++ ++RP ++ + + Sbjct: 124 YESTAKGVLLTDGVQKALDEALAKLPIPKVMRYQLQDG-WTSVHFVRPAHGLVVMHGTQV 182 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAI 228 I + + G T+GHRF A P+ +Q+ D Y L E V+ RR I Sbjct: 183 L----IGVKALGLTAGAATHGHRFEAAVDPVVIQNADSYAEQLREEGAVIASFTERRADI 238 Query: 229 LNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 A +G ++D LL+E+ LVE V + F+K++L +P+E + LT+K N Sbjct: 239 ARQLQAAAERIGGDVRPIDDPALLDEVTALVERPNVLVCEFEKEFLAVPQECLILTMKAN 298 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F G L + F++VSNIQ D +A+V GN RVV RL DA F+ +D+ Sbjct: 299 QKYFPLLDANGKLTHQFLIVSNIQPQDA-SAVVGGNERVVRPRLADAKFFFDQDR----- 352 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 K L R+ +LD VV+H K+GTQGER++R+R + K IAQ + Sbjct: 353 ---------------KKTLASRVEQLD--KVVYHNKLGTQGERIARVRAIAKSIAQQLGN 395 Query: 407 DV--ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 L D+A +L+K DL T++V EFPELQG +G+ YA +++ DAIE+H KPR Sbjct: 396 SELGRLADQAAMLAKTDLVTDMVGEFPELQGIMGRYYAQNDGLDVAVADAIEDHYKPRFA 455 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E +++ Sbjct: 456 GDELPRGDVGVIVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVEKDLELD 515 Query: 525 LSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 L L+ F +DRL ++ +EA+L + L + Sbjct: 516 LETLLVSTLPAFGDKIQDATPQLVEFIYDRLANMFREQGYSAQEVEAVLALQPQRLSDVQ 575 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + F + + + KR+ IL E ++ ++ L+ +AEK LYAV+ Sbjct: 576 KRLEAVRAFATLPEAPALAAANKRVGNILKKAE---TDVQPQVKEALLVEQAEKELYAVL 632 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 Q+ Y L ++ ++ FF+QV+VN +D ++ NRL LL Sbjct: 633 QQVAPKAQQQFAAGDYTASLQTLAALRASVDAFFEQVMVNAEDPVLKANRLGLLMLQHEA 692 Query: 692 ILIVINVQKI 701 + V ++ ++ Sbjct: 693 MNKVADLARL 702 >gi|238019251|ref|ZP_04599677.1| hypothetical protein VEIDISOL_01115 [Veillonella dispar ATCC 17748] gi|237863950|gb|EEP65240.1| hypothetical protein VEIDISOL_01115 [Veillonella dispar ATCC 17748] Length = 683 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 198/728 (27%), Positives = 331/728 (45%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL Sbjct: 1 MAKDLLFEIGAEEIPAGFMPNILGQLKQLAETKLNDAHLPFESIATYGTPRRLALIVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + S E E GP G KA GF R GL + +D A Sbjct: 61 ADTSAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVAD--LVVEDG----YIYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ ++P I + +PKSM W + ++RP++ ++ +L Sbjct: 115 TKTAGVPAKDIVSEMLPQLITGLNFPKSMHWGNLDA-----KFVRPVRWLVALL-----D 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 165 EEVIPVEFATVKSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 225 HDIAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + G L F+ V N + + GN RV+ ARL+DA F+ D+ Sbjct: 285 VDQNGKLLPMFLTVRNG-SDHSIEVVQAGNERVLRARLDDAKFFFNEDR----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 KPL R L +VF +G ++ R+ LG+ + Sbjct: 333 ---------KKPLIDRQDGL--TKIVFQEGLGNLADKTERLLKLGRVFGEECGLHEDAAV 381 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + +P Sbjct: 382 VLERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESEEVAEAIFEQYLPRFAGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L Sbjct: 442 QTEAGKVLSIIDKVDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLRPIF 501 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + FF RLK DR++ H +I+ +L ++ L Sbjct: 502 KASMELLNVAADKQDELLGQVEEFFTLRLKNIFLDREVPHHVIDLLLSNNELSVADAEGL 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L E + + R++ ++ K+ E + ++ L +AEK L+ S Sbjct: 562 VNALLANRIDENVE-LVQAYTRMYNLV-----KDLEYTG-VNSDLLKEDAEKALFEAASK 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + Y + + ++ I FF+ V+V D ++ NRL L++ +++ Sbjct: 615 ASEASLAAWEANDYAAVVAVPATLVPAINKFFEDVMVMDKDEAIKSNRLQLVRLAYSVMA 674 Query: 694 IVINVQKI 701 I+ ++ + Sbjct: 675 IIGDISAL 682 >gi|313896142|ref|ZP_07829696.1| glycine--tRNA ligase, beta subunit [Selenomonas sp. oral taxon 137 str. F0430] gi|312975567|gb|EFR41028.1| glycine--tRNA ligase, beta subunit [Selenomonas sp. oral taxon 137 str. F0430] Length = 687 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 196/731 (26%), Positives = 323/731 (44%), Gaps = 80/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA ++ + + E + Y +R TP R+ L + G + Sbjct: 4 DLLLEIGTEEIPAHAMPNLLREMKRLAGEMFTEHRISYDEIRTLGTPRRMALIVTGAAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP + G KA GF R + + I++D A + + Sbjct: 64 QADVSTETRGPAISIAFDADGNPTKAGAGFARGQHVAP--EALIRRDG----YVYAAVHE 117 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++LK ++P I+ +P P SMRW F +IRP++ I+ + + + Sbjct: 118 TGAPTAEILKELLPALIRAIPLPNSMRWGDLD-----FRFIRPIRWIVALYGTD-----V 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L E+ GN + GHR AP + S Y E A +++DP RR I Sbjct: 168 VPFTLAEVTSGNRSRGHRTLAPEDFTITSAADYETACEAAYIIVDPVRRRAMISEQIADA 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G DLLEE++ LVE+ GSF++KYL LP E + ++ +Q+ F + Sbjct: 228 AKACGGTAEITPDLLEEVLYLVEYPTALSGSFEEKYLALPAEAVITPMRDHQRYFPVKAA 287 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + + GN RV+ ARL DA F+ D+ Sbjct: 288 DGSLLPVFITVRNGG-REHLDVVAHGNERVLRARLADAQFFFDEDR-------------- 332 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--------D 407 K L + +L VVF +G+ E+ R+ L + + + A Sbjct: 333 ------KKSLAEHREKLHT--VVFQQGLGSMYEKTERLARLAAAVVEDMTAGDDAAYETM 384 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A RA LSKADL T +V EF ELQG +G+EYA+L E AI+E PR + Sbjct: 385 AADARRAAELSKADLVTGMVTEFTELQGIMGREYALLDGEKPEVARAIDEQYMPRFAGDA 444 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + + +S+ADK+D ++ ++ + P+GS+DP+ LRR LG + +++ ++ I LS Sbjct: 445 LPKSDLGFALSVADKIDNIVGTFSRGKIPTGSQDPFGLRRQALGFVNMLILHESGILLSD 504 Query: 528 FIE----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++ ++ F RLK L +R +R+D+ EA+L + D + + Sbjct: 505 LVDEACDLYDLDDAARSKMQADVAEFIRLRLKNVLTERGVRYDVQEAVLS-DVDAVADVP 563 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + + S R+ I + + P + E+ ++ Sbjct: 564 GRAAYVERLLEESDAAALVQSFVRVGNIARSA------PTGAVDPALFAADEERA---LL 614 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + + + I+ FFD V+V D V+ NRLSLL+ I + Sbjct: 615 AAYEAAAELRAAGGDTAETIAAERRLAVAIDAFFDAVMVMDKDARVKTNRLSLLKSIDDG 674 Query: 692 ILIVINVQKIV 702 +L + + +KIV Sbjct: 675 LLEIADFRKIV 685 >gi|153005319|ref|YP_001379644.1| glycyl-tRNA synthetase subunit beta [Anaeromyxobacter sp. Fw109-5] gi|152028892|gb|ABS26660.1| glycyl-tRNA synthetase, beta subunit [Anaeromyxobacter sp. Fw109-5] Length = 697 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 199/729 (27%), Positives = 329/729 (45%), Gaps = 68/729 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A + L L L + + ++ TP RL ++ + ++ Sbjct: 1 MADLLFEIGAEEIPAGFVPPALKQLQEDLARALDAARLSHGEVKAVGTPRRLAVWARDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E LGP V G +A GF +S G+ + KG+ Sbjct: 61 RRQTDAKTEALGPPVAQAFDASGNPTQAALGFAKSQGVDVSKLE--RAQTPKGERVAVTR 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R E VL ++ + + + K+MR ++ RP++ ++ + Sbjct: 119 IEEGRKAEKVLPELLERLLGGLRFKKAMRS-----RWDEVTFARPIRWMVALYGG----- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQ-SLDHYIRDLEEAMVLLDPECRRNAILNDA 232 K + + E+ G +T+GHRF AP I ++ + D Y+ L A VL+DP RR A+ + Sbjct: 169 KPLKVRHGELVSGAVTFGHRFAAPRSIALKGTPDDYVAKLRRAKVLVDPVERRAALEQEL 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A A G +L D+ L+E+++ LVE G F+K L LP E++ ++ +Q+ F Sbjct: 229 AKAAKAAGGKLRPDEPLVEQVLYLVEHPTGVAGEFEKSNLDLPPEVVVSEMRNHQRYFAL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L N F+ VS D G RV+ ARL DA F+ D+ Sbjct: 289 VDGKGRLKNRFVAVSGTPVKD-PRVARHGYERVLRARLADARFFFDEDKR---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--AL 410 +PL R+ L F A++G++ R RI +G +A+ I + + Sbjct: 338 ----------RPLRDRIEDLGRR--TFQARLGSELARADRIVAIGSALARAIGREELVSD 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V A L+K DL T +V EFPELQG +G YA L+ +AIE+H KP G E +P Sbjct: 386 VVEAARLAKTDLTTGMVGEFPELQGVMGGHYARLEGLKPEIAEAIEDHYKPVGASEEMPR 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + V++AD+L +L+ + EK +G+ DP+ LRRA +GI+R++L + LS IE Sbjct: 446 GDVGALVAIADRLHSLVGIIGVGEKATGAADPFGLRRAAIGILRLLLARGYHLSLSAAIE 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ F RL+ + DL+EA+L D+++ Sbjct: 506 QTLDTLGGVRLASDRAVVAEQVLDFLRGRLRAQWSEE-FDADLVEAVLGAGFDDVVDARR 564 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ L E + A ++ KR+ I E + Q L EAE+ L + + Sbjct: 565 RLEALAEVKARADFVPLAVAFKRVANIQEKSETAG----AVVDRQLLREEAERHLLSELE 620 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + Y + + ++ + FFD VLV ++ VR NRL L++ + + Sbjct: 621 RVESEAAALRGTRDYPGVLRNVATLEPAVARFFDDVLVMAEEPAVRANRLGLMRRVAALF 680 Query: 693 LIVINVQKI 701 V + +KI Sbjct: 681 SGVADFRKI 689 >gi|119487891|ref|ZP_01621388.1| glycyl-tRNA synthetase beta subunit [Lyngbya sp. PCC 8106] gi|119455467|gb|EAW36605.1| glycyl-tRNA synthetase beta subunit [Lyngbya sp. PCC 8106] Length = 717 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 189/721 (26%), Positives = 330/721 (45%), Gaps = 75/721 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA +A + ++ L+E+ + +++ Y TP RL + ++GL Sbjct: 1 MPSFLLEVGTEELPAPFVEQALQQWRRLIPTTLEEQFLQSESIDVYGTPRRLAVVIRGLP 60 Query: 61 PHSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP A KA GF + G++ + +KGD + Sbjct: 61 QQQADRDEEIKGPPASAAFKNDQPTKAAVGFAKKQGVELDELEI--RPTEKGDFVFVQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R D+L ++P I K+ + MRW + RP++ ++ +L + Sbjct: 119 IAGRPTADILTELIPQWITKLEGKRFMRWGDGE-----LKFPRPIRWLVVLLDDKILPVT 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ I+ GHR P I++ + Y+ L + + +DPE R+ I + Sbjct: 174 LVSGS-DKVESNRISQGHRVLHPEAIEISTATDYLDSLRQGFIEVDPEQRKTTIEAEIKT 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + ++G +LL E+I LVEW +G F+ ++L LP E+I+ + T+Q+ F Sbjct: 233 ASKSIGGNAEIPDELLAEVINLVEWPTAVVGKFEDEFLNLPPEVIKTVMVTHQRYFPVLE 292 Query: 295 REGV----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 L + FI +SN + I GN RV+ ARL D F+K D Sbjct: 293 TAKSVQSPLKSYFITISNGDPAKSN-IIAAGNERVIRARLADGQFFYKSD---------- 341 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA- 409 L +PL+ + L+ V F K+G+ ++V+RI + I+Q + Sbjct: 342 ----------LKQPLEAYLPNLET--VTFQEKLGSVRDKVNRIGQVADLISQQLQVSPTE 389 Query: 410 --LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + R+ +L KADL T++V EFPELQG +G++YA E + AI EH PRG ++ Sbjct: 390 HTQIQRSALLCKADLVTQMVYEFPELQGIMGEKYARECGEPDAVATAIFEHYLPRGATDS 449 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + V LAD+LDTL++ + + PSGS DP+ALRRA ++ I E + I L Q Sbjct: 450 LPQTLVGQVVGLADRLDTLVSIFGLGMIPSGSSDPFALRRAANAVVNITWEANLTINLHQ 509 Query: 528 FIED-----------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPEN----- 564 +E L FF R++ L D ++I +DL+ A+L ++ Sbjct: 510 LLEQLVAEFTRNYDKVIPDLLSQLYEFFLQRIRTLLQDEKNIDYDLVNAVLGEDDPEYTE 569 Query: 565 ---DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYL 619 +LL + + L + ++ + R ++ + ++ + ++P+ Sbjct: 570 RALKDLLDVRERATFLQTIRQDSSLDQIYETVNRSTRLAKQGDLDTVQLQPKKLVNPKLF 629 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDRE 676 +E++ Y + + + + Y Q+ D L I + FFD VLV ++ E Sbjct: 630 AKSSEEQFYQALIALVPKTEAAQKTRNYRQLVDALAEIAPTVSTFFDGPESVLVMDENPE 689 Query: 677 V 677 + Sbjct: 690 I 690 >gi|188993684|ref|YP_001905694.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. campestris str. B100] gi|229558587|sp|B0RYX3|SYGB_XANCB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|167735444|emb|CAP53659.1| Glycyl-tRNA synthetase beta chain [Xanthomonas campestris pv. campestris] Length = 698 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 200/734 (27%), Positives = 331/734 (45%), Gaps = 71/734 (9%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ GV + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLAQAFFDGVLAGLEKRGVAVTRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G +A+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGKPTRALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P +L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGAQAAALLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + +I +L + IT GHRF I + + YI L A VL+D + RR I Sbjct: 172 ---GDTVIPAELLGVRGDRITRGHRFMHDGDIALAAPGDYIDALRAAHVLVDADARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVDAAARQAGGSARISDDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI + D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGKLTEQFIGIANIVSKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEAIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L + Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLPKL 505 Query: 529 IE---------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 I+ +L F DRLK Y D+ + A+ +L Sbjct: 506 IDVGLASLPDAVKPHADRNTETVRADLYDFILDRLKGYYADKGVAATHFNAVAELTPASL 565 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 I + F + + E + KRI IL K EI +I L AE+ L Sbjct: 566 YDFDRRIDAIGIFATLPEAEALAAANKRIRNILR---KVEGEIPGDIDTTLLREPAEEAL 622 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + +++ Y + L + ++ FFD V+VN DD ++R NRL+LL+ Sbjct: 623 AEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLRANRLALLKK 682 Query: 688 IKNIILIVINVQKI 701 + + + V ++ + Sbjct: 683 LGDRLGSVAAIEHL 696 >gi|21233508|ref|NP_639425.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770473|ref|YP_245235.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. campestris str. 8004] gi|25009328|sp|Q8P3I5|SYGB_XANCP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|81303580|sp|Q4UP08|SYGB_XANC8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|21115360|gb|AAM43307.1| glycyl-tRNA synthetase beta chain [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575805|gb|AAY51215.1| glycyl-tRNA synthetase beta chain [Xanthomonas campestris pv. campestris str. 8004] Length = 698 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 200/734 (27%), Positives = 332/734 (45%), Gaps = 71/734 (9%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ GV + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLAQAFFDGVLAGLEKRGVAVTRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G +A+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGKPTRALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P +L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGAQAAALLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + +I +L + IT GHRF I + + YI L A VL+D + RR I Sbjct: 172 ---GDTVIPAELLGVRGDRITRGHRFMHDGDIALAAPGDYIDALRAAHVLVDADARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVDAAARQAGGSARISDDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI + D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGKLTEQFIGIANIVSKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEAIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L + Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLPKL 505 Query: 529 IE---------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 I+ +L F DRLK Y D+ + A+ + +L Sbjct: 506 IDVGLASLPDAVKPHADRNTETVRADLYDFILDRLKGYYADKGVAATHFNAVAELKPASL 565 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 I + F + + E + KRI IL K EI +I L AE+ L Sbjct: 566 YDFDRRIDAIGIFATLPEAEALAAANKRIRNILR---KVEGEIPGDIDTTLLREPAEEAL 622 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + +++ Y + L + ++ FFD V+VN DD ++R NRL+LL+ Sbjct: 623 AEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLRANRLALLKK 682 Query: 688 IKNIILIVINVQKI 701 + + + V ++ + Sbjct: 683 LGDRLGSVAAIEHL 696 >gi|332970432|gb|EGK09424.1| glycyl-tRNA synthetase beta subunit [Kingella kingae ATCC 23330] Length = 683 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 204/684 (29%), Positives = 333/684 (48%), Gaps = 58/684 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + ++ L + +I Y +P RL + + + ++ + Sbjct: 16 PPKALNNLGNHFAQSIVEGLGKAQLIDGETQFTPYASPRRLAVQVANVKAVQADQHVVKK 75 Query: 72 GPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVA 131 GP V A +KAI GF RS G++ S I + K D+Y + + + D+L IV A Sbjct: 76 GPAVSANEKAIAGFARSCGVEVGSLKVI--NDGKQDIYAHEFTQTGQTLADLLGEIVNAA 133 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 ++K+P PK MRW + S +++RP+ ++ + A+ ++ +++ + N T G Sbjct: 134 VKKLPIPKVMRWGS-----STHTFVRPVHGLVAMHGAD-----VLPVNVLGLASRNFTLG 183 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 HRF + I D Y + L E V+ + R+NAI + A ++ + D+ LL Sbjct: 184 HRFLSQGEIVFAQADDYAKQLAEQGKVIANFAERKNAIQAALNEQAGSLKATVAADESLL 243 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQ 310 +E+ LVE+ V F+ +L +P+E + LT++ NQK F +G L N F+LVSN+Q Sbjct: 244 DEVTALVEYPVVLQAGFEAHFLAVPQECLILTMQQNQKYFPLLDAQGKLMNRFLLVSNLQ 303 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 A+D + I+ GN RV+ ARL DA F+K+DQ L+ R+ Sbjct: 304 AAD-PSHIIHGNERVLRARLSDAEFFYKQDQ--------------------KATLESRLP 342 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 +L VV+H KIG+Q ERV R++ + IA + AD A +RA L+KADL TE+V EF Sbjct: 343 KL--ASVVYHNKIGSQAERVERLQTIAAHIASALGADKAAAERAARLAKADLVTEMVGEF 400 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +GK YA L E AIE+H +PR + +P N I V+LADKL+TL+ W Sbjct: 401 PELQGTMGKYYAQLDGEQPEIALAIEQHYQPRFAGDALPENAIGTAVALADKLETLVGIW 460 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIP---------------LSQFIEDQNLI 535 I P+G KDPYALRRA LG++R+++ + I + + Sbjct: 461 GIGLIPTGDKDPYALRRAALGVLRMLMNYPLSINDLLNTVADQFPANVLADKAKTVAEIA 520 Query: 536 LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKR 595 F RL + L D D++ A+L D L + ++ + +F + + KR Sbjct: 521 DFMQARLAVLLQ-NDYSQDVVAAVLAQRPDRLNDLAAKLQAVEQFKQLPESAALAAANKR 579 Query: 596 IFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 + +L + + +++ + EK L+A D + ++ + L Sbjct: 580 VQNLLKKADAQ----LGDVNASLFAQDEEKALFAAAQDLQPKVADAAKRGDFQAALTELA 635 Query: 656 SICEPIEIFFDQVLVNVDDREVRD 679 +I ++ FFD V+V +D V+ Sbjct: 636 AIKPQVDAFFDGVMVMAEDAAVKQ 659 >gi|262277439|ref|ZP_06055232.1| glycyl-tRNA synthetase, beta subunit [alpha proteobacterium HIMB114] gi|262224542|gb|EEY75001.1| glycyl-tRNA synthetase, beta subunit [alpha proteobacterium HIMB114] Length = 687 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 217/721 (30%), Positives = 360/721 (49%), Gaps = 57/721 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DF LE+YSEEIP +Q A + + ++ L E + ++ + + TP RL + ++ ++ Sbjct: 1 MSDFFLELYSEEIPHGLQIHARKQIHELIFKELNENNIKFKGLDVFSTPKRLIVLIENIT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + + +E GP+VG +A++GFL+S + + I+K KG+ Y L L Sbjct: 61 LNQKIESQEVKGPKVGCNDQALEGFLKSKN--ALKEDLIQKSTDKGEFYFVKLPAKTLLT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D+L+ +P +Q + W KSMRWS W RPLKSILC+L K++D Sbjct: 119 SDILRKKLPSILQTINWKKSMRWSDHDCF-----WGRPLKSILCLL-----DNKVLDFSF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N TY + +K+++ Y ++LE+ + ++ R + I + +L Sbjct: 169 FHINSSNSTYVNGPFEDKEVKIKNFKDYKKNLEKNKIEINHIKRESKINIELEKLLKKNK 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 + L++E+ LVE + G FD +YL LP+EL+ LT+ +Q+ F + +E + Sbjct: 229 CSFEINNALVDEVTNLVETPVILKGKFDSEYLVLPDELLNLTMVNHQRYFPMKSEQENKM 288 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 N F+ V+N D I +GN +V+ ARL DA FW +++ Sbjct: 289 INSFLFVANNF--DNKNLITKGNEKVIDARLSDAKFFWDKNKR----------------- 329 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L +++ +L+ +VF+ K+GT ++ RIR L IA I A+ + A + K Sbjct: 330 ---QNLVKQVTKLN--SIVFYQKLGTLYDKTQRIRQLSSVIADTIGANKEDTEIAGSICK 384 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL +++V E+PELQG IG+ +A+ Q + +AI+ H P GP VP KISI V++ Sbjct: 385 ADLVSDLVGEYPELQGTIGRYFALEQGFSQEISNAIQNHYLPLGPSGKVPKEKISIAVAV 444 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADK+DTLI F+ I+EKP+ SKDP+ALRRA G++R+I ENKI + L + + + Sbjct: 445 ADKIDTLIGFFGIDEKPTSSKDPFALRRACFGVLRLITENKISLSLKEILNNSKNLYLSQ 504 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTIVDLIKHLNEF 580 ++L FF +R K+ L D+ R D+ +IL +D+ I+ I L++ Sbjct: 505 NYQLSNEKVIEDLFQFFIERFKINLKDKGARLDVTNSILGNNRSDDFYLIMKNINELSKC 564 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 ++G+ + KR IL + E +E + +++ + Sbjct: 565 LKKSQGQDAISIYKRSKNILDQSN-QEEEFFGNPDNVLFQHPSEDEILIKLNEARDYFTT 623 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + + LL + + FFD V VN D+++VR NRL LL + + K Sbjct: 624 PSRLRDNEKTITLLSELKPMTDNFFDNVKVNDDNQQVRKNRLELLTLLCKTFEKFTDFSK 683 Query: 701 I 701 + Sbjct: 684 L 684 >gi|56963450|ref|YP_175181.1| glycyl-tRNA synthetase subunit beta [Bacillus clausii KSM-K16] gi|81822137|sp|Q5WHD5|SYGB_BACSK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|56909693|dbj|BAD64220.1| glycyl-tRNA synthetase beta chain [Bacillus clausii KSM-K16] Length = 693 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 206/718 (28%), Positives = 326/718 (45%), Gaps = 71/718 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PAR + L+ + L ++G+ Y + Y TP RL + ++ L+ P+ +E GP Sbjct: 15 PARFVTPSITQLAEKVQAWLDDKGLSYGEIHSYATPRRLAILVENLADRQPDIHDESRGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 + GA KA GF + G++T K D A K +L Sbjct: 75 ALKIAKDESGAWTKAALGFAKGQGVETSQLEI--KAVNGTDYVFAKTHKKGEKTSVLLPE 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + I + +PKSMRW+T + + RP++ ++ + E +I + I G Sbjct: 133 -LKELITGLTFPKSMRWNTY-----SLRYARPIQWLVALY-----GEDVIPFSINGIETG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 T GHRF + + Y L+ V+ D E R+ AI++ ++ + D Sbjct: 182 RNTTGHRFLGAD-FPLDNPIEYADALKRQYVIADAEERKAAIVSQLKQMEEEHSWVVPID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LLEE+ LVE+ GSFD +L LP+E++ T++ +Q+ F ++G L FI V Sbjct: 241 EALLEEVTQLVEYPTALSGSFDDSFLALPKEVLITTMREHQRYFPVEAKDGRLLPYFITV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N + + +GN +V+ ARL DA F+ DQ L Sbjct: 301 RNG-NEEYIENVAKGNEKVLRARLSDAAFFYHEDQ--------------------KISLQ 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDRAIVLSKADLC 423 A+LD ++VFH IGT GE+V+RI L K +A + + V+RA ++K DL Sbjct: 340 AANAKLD--NIVFHEAIGTMGEKVARIGELSKWLAGEANLGAQERQTVERAAAIAKFDLV 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EFPELQG++G+EYA E AI E PR + VP + ++LADKL Sbjct: 398 TYMVGEFPELQGRMGQEYAEKAGETPQVAKAIYEQYLPRYAGDKVPETEAGAVLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------- 528 DT+++ ++I P+GS+DPYALRR GII I+L+ ++ + L Sbjct: 458 DTVVSCFSIGLIPTGSQDPYALRRQATGIIHILLQTEMPLTLENMAVHALDSIAKKGFMT 517 Query: 529 ----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 Q LI FF +RLK + + R+D+++A+L ++ T+ + L E Sbjct: 518 EKVETTKQELISFFANRLKHVMLEAGFRYDIVDAVLAAPLVDVYTMFAKARLLTERAEDR 577 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + ++ S R+ + K + +S E E RL A + + E+ Sbjct: 578 EFKEVTESLSRVTNLAKKAPKG-----VFVSENLFENETESRLLAATLEVEFGLAEAWKV 632 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K + L I FFD +V D+ R+NRL+LL + I + QKIV Sbjct: 633 KDAYAAYQALAQCRATINTFFDHTMVMADNEATRNNRLALLDRLAKSIQSYADFQKIV 690 >gi|172056865|ref|YP_001813325.1| glycyl-tRNA synthetase, beta subunit [Exiguobacterium sibiricum 255-15] gi|171989386|gb|ACB60308.1| glycyl-tRNA synthetase, beta subunit [Exiguobacterium sibiricum 255-15] Length = 686 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 196/715 (27%), Positives = 334/715 (46%), Gaps = 70/715 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 +PAR ++ L + L E + + + + TP RL + + G+S + E G Sbjct: 13 MPARFVLQSETQLKERVTTFLNEARITFDTIESFSTPRRLAVLVTGMSERQTDLEETLKG 72 Query: 73 PRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 P G KA GF R GL T ++ K + A ++ + +L Sbjct: 73 PAKRIAQDEDGNWTKAAQGFARGKGLTTDDLFL--QEEKGVEYIFATRKESGQETATLLP 130 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + ++ + +PK+MRWS + ++RP++ ++ +L +++I ++ ++ Sbjct: 131 G-LKQIVEAMSFPKNMRWS-----TQSLRYMRPIRWMIALL-----DDQVIPFEVADVAT 179 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G + GHRF I + + Y+ L V+ E RR I +L+ G E+ Sbjct: 180 GRTSRGHRFLGQD-ITILRPNAYVEALAGEHVIASYEQRRQLIEEQIQQLSEQEGFEVPI 238 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D LLEE+ LVE+ G+FD+ YL LPEE++ T+K +Q+ F + ++G L + F+ Sbjct: 239 DPALLEEVTNLVEYPTALFGAFDEAYLELPEEVLITTMKEHQRYFPVK-KDGTLLHYFVT 297 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A+ + +GN +V+ ARL DA F++ D+ + Sbjct: 298 VRNGNATH-IENVARGNEKVIRARLADAQFFYEEDK--------------------KADI 336 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTE 425 D + ARLD +VFH K+GT GE+V R+R + ++A+ +AD V+RA + K DL ++ Sbjct: 337 DAQAARLD--KIVFHEKLGTTGEKVRRVREMALQLAERFNADSTKVERAGTIYKFDLVSQ 394 Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EF ELQG +G+ YA ++ E++ AI EH PR + P+ +++ DK+D+ Sbjct: 395 MVYEFTELQGMMGERYANMKGEDVEVAAAIREHYLPRFAGDESPSTPTGTVLAVLDKMDS 454 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------------- 531 + F+ + PSGS DPYALRR GI++I+ + +I++ LS+ I+ Sbjct: 455 VGGFFGVGMIPSGSADPYALRRQAQGIVQILSDRQIEMTLSELIDFVVSAQLKAGLYQAD 514 Query: 532 -----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + FF+ RLK L ++ RHD+IEA L P+ L + Sbjct: 515 AETVKAAMEDFFNQRLKFRLSEKGYRHDVIEAALDPKLTVEAN-EKRASMLEQATQQPTF 573 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 +K + R+ I E + ++P +AE+ L+ I ++ ++ Sbjct: 574 KKTVEQLSRVLNISKKAETV-----VAVNPALFENDAERDLHEQIEQLIPKVEAAVQASD 628 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y Q +L S I +FD ++ DD VR NRLS ++ I V + Sbjct: 629 YDQAIQVLESSVPAITAYFDGTMIMADDEAVRTNRLSEMKRFATAIEQVARFNAL 683 >gi|258647017|ref|ZP_05734486.1| glycyl-tRNA synthetase, beta subunit [Dialister invisus DSM 15470] gi|260404458|gb|EEW98005.1| glycyl-tRNA synthetase, beta subunit [Dialister invisus DSM 15470] Length = 683 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 195/729 (26%), Positives = 338/729 (46%), Gaps = 73/729 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LLEI +EE+PA M E + + L E + ++ + Y TP RL + + Sbjct: 1 MSKNLLLEIGTEEMPANMMSGIVEQMHALAGAKLNEARIAFEKVDVYATPRRLAVIVTAA 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P++ ++ GP + G KA +GF R G+ K+G+ A Sbjct: 61 ADAQPDEEVKKRGPSIRAAYDENGNMTKAAEGFARGQGISAADLI------KEGEYTWAQ 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++E++L + I + + +SMRW + +IRP++ I+ + A Sbjct: 115 VVNKGKMVEEILPALFTSLITGLNFTRSMRWGDEEA-----RFIRPVRWIVAL-----AG 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E ++ ++ + G ++ GHRF ++++S + Y + +A V+ D + RR I Sbjct: 165 EAVVPMEFAHVRSGRMSRGHRFLCKEEVEIKSPETYKETMRKAFVIADQDERRALITAGL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A +G ++ + DLLEEI LVE+ G D+++L LP + ++ +Q+ + Sbjct: 225 QKTAKELGGQVWHNADLLEEINYLVEYPTPLYGRIDEEFLDLPVPAVVTPMRDHQRYYPV 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G L F+ V N + GN RV+ ARL+DA F+ D+ Sbjct: 285 RKEDGSLMPYFLTVRNGGDRAIRNVQI-GNERVLRARLDDAKFFFDGDRR---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVA 409 K L+ L + + +GT ++ R+ L + I + D + A Sbjct: 334 ----------KSLEGHREALSR--INYQEGMGTMLDKSDRLVKLVEAIGEDWNFTDTEKA 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V RA LSK+DL T +V EF ELQG++GKEYA+L E AI E PR + +P Sbjct: 382 DVRRAAYLSKSDLATGMVTEFTELQGEMGKEYALLDGEKPKVAAAIFEQYMPRFAGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I +SL+DKLD L + P+GS+DP+ALRR T+G + I+ + +I + + + Sbjct: 442 KSSIGRALSLSDKLDNLAATFLRGLIPTGSQDPFALRRQTIGAVHILTDGEIHWDVRKGV 501 Query: 530 ED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + FF R+K L D + +D+++A+L D++ I Sbjct: 502 KMALALLPGTQEEKDTAADKVEDFFRQRIKAILLDEGVDYDIVDAVLTGAVDDVYAIFLK 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + + + E + R+ I + ++EI P+ L EAEK LYA + Sbjct: 562 AHSMMDSHVKGELE-MRQAVTRLVNITK------GKTAVEIRPELLTEEAEKNLYAALEK 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 G + + + Y L ++ PI F D V+V V++ VR+NR+SLL + ++ Sbjct: 615 AGEEVTSAYNAYDYGSALPALKTLTVPINQFLDSVMVMVEEEAVRNNRISLLINVLDVYR 674 Query: 694 IVINVQKIV 702 + K+V Sbjct: 675 RWGDFSKLV 683 >gi|238854655|ref|ZP_04644985.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 269-3] gi|282932954|ref|ZP_06338351.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] gi|313472194|ref|ZP_07812686.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 1153] gi|238832445|gb|EEQ24752.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 269-3] gi|281302989|gb|EFA95194.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] gi|313449093|gb|EEQ68575.2| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 1153] Length = 688 Score = 535 bits (1378), Expect = e-149, Method: Composition-based stats. Identities = 204/732 (27%), Positives = 347/732 (47%), Gaps = 79/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + ++ + L+ LK+ G+ ++ ++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSRSVKQLADRTSKFLKDNGLEFKAIKTFSTPRRLTILVQDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF+R G+ T I + KG Y V + Sbjct: 63 KQADIDEVKKGPAKKIALDSEGNFTKAAQGFVRGQGMTTDD---IYFEDLKGTEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K +L D+L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 120 QKAGKLATDILLGM-SDIIKAMTFPTKMRWGSND-----FEFVRPIHWLVSLFGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + + +I G T GHRF + + + D Y L+ V+ D R+ I+N Sbjct: 170 -VVPVKILDITAGRKTMGHRFLG-DSVILANSDDYEEALKSQFVIADAAERKTMIVNQID 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +L + ++ D LLEE+ LVE+ VF GSFD+ YL +P+E++ ++K NQ+ F Sbjct: 228 QLVAENNWKVKLDASLLEEVTNLVEYPTVFAGSFDESYLNIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L N FI V N + ++ GN +V+ ARL+DA F+ D+ Sbjct: 288 DQDGKLINHFISVRNG-NKEFLENVISGNEKVLVARLDDAKFFYDEDK------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VAL 410 PL ++RLD V FH KIG+ E++ R+R++G+ +A+ + Sbjct: 335 --------KYPLSHFVSRLD--KVSFHDKIGSMAEKLIRVRIIGEYLAKKFGLSDEVIKN 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +PT Sbjct: 385 FDRASELYKFDLVTQMVGEFAELQGVMGMHYAELAGENKDVALAIKEHYMPLTAEGELPT 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 +++ +S+ADK D +I F+A P+ S DPYALRR GI+RI+L + + + Sbjct: 445 SEVGALLSVADKFDNIITFFAAGMIPTSSNDPYALRRYAYGIVRILLNENWSLAIDKALP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ED+ + LF DR+K +L + ++D+I+A+L + I Sbjct: 505 KMVELLDGKTKAKMPKTSQEDEEISLFIRDRIKQFLQTNNYKYDVIDAVLHSSQKDPSRI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L S + + + S RI IL + K + + +E LY Sbjct: 565 LAAAKVLQAHHDSPEFKPVVESLIRIENILKKAKYKGDSV---VKSDLFEDNSENELYLA 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + ++ + S+ + I+ +F+ ++ D V++NRL+ L I Sbjct: 622 SQNLQ-------AIDNLTELYEAFVSMQKVIDRYFEVNMIMAKDEAVKNNRLAQLSQINE 674 Query: 691 IILIVINVQKIV 702 + + + K+V Sbjct: 675 LATRLGALSKLV 686 >gi|145638254|ref|ZP_01793864.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittII] gi|145272583|gb|EDK12490.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittII] Length = 639 Score = 535 bits (1378), Expect = e-149, Method: Composition-based stats. Identities = 187/634 (29%), Positives = 302/634 (47%), Gaps = 58/634 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLCEKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGRLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F K+GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQKLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE 613 F + E + KR+ ILA + EI+L Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLT 603 >gi|161523777|ref|YP_001578789.1| glycyl-tRNA synthetase subunit beta [Burkholderia multivorans ATCC 17616] gi|189351462|ref|YP_001947090.1| glycyl-tRNA synthetase subunit beta [Burkholderia multivorans ATCC 17616] gi|160341206|gb|ABX14292.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans ATCC 17616] gi|189335484|dbj|BAG44554.1| glycyl-tRNA synthetase beta chain [Burkholderia multivorans ATCC 17616] Length = 699 Score = 534 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 200/714 (28%), Positives = 335/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + L L ++ +Y TP RL + ++ + +P++ E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPDRQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G ++ ++++ K + + + D Sbjct: 79 VLPVSVALDAQGNPTAPLAKKLAALGRPNLTIAELERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--SDVQFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ R+ I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHASAYAETLRDKGRVIAHFGDRKETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPDALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDIGGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ RV R+ L +IA I ADVA RA L+KADL Sbjct: 349 KPLAARVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADVAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDTLPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R+++E ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLIEKQLPLDLVSLLRTAYARFEGVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ FF DRL+ L +R ++A+L L +V + + EF A+ E Sbjct: 527 AESTDAIVAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRLDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNADDPALRANRLALLSALHQQMNCVADISKL 697 >gi|282897614|ref|ZP_06305614.1| Glycyl and Arginyl tRNA synthetase [Raphidiopsis brookii D9] gi|281197537|gb|EFA72433.1| Glycyl and Arginyl tRNA synthetase [Raphidiopsis brookii D9] Length = 716 Score = 534 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 190/720 (26%), Positives = 318/720 (44%), Gaps = 73/720 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + +L+ G+ + + + TP RL + + GL Sbjct: 1 MTAFLLEVGTEELPASFLSSAITQWRSRIPQMLEAHGLPIEKVAVFGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G KA +GF + G++ + + KGD R Sbjct: 61 SQQPDQDEEIKGPPAQAAFKDGKPTKAAEGFAKKQGVELSALE--VRSTDKGDFIFVNKR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R I ++L +VP + + + MRW + + RP++ ++ +L + + Sbjct: 119 TLGRPITEILTELVPQWVWSLEGKRLMRWGSGDG-----RFSRPIRWLVALLDGDVLPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + + + K + I++ HR + + Y+ L V++ PE R I++ +R Sbjct: 174 LRNGE-KIVKSDRISWVHRVLHREAVSISHATEYVETLANGYVIVSPEEREKIIVDQVNR 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +G DLL E LVE+ +G F+ ++L LP E+ + T+Q+ F Sbjct: 233 AVEELGGCTEIYPDLLAETTNLVEYPTAVVGKFEDEFLQLPTEVSTTVMVTHQRYFPVFK 292 Query: 295 REGV--LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L F+ +SN + I GN RV+ ARL D F++ D Sbjct: 293 NRDRRELLPNFVTISNGDP-EKSDIIALGNERVIRARLADGRFFYEAD------------ 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 L+KPL + +L+ V F +G+ +V+RI + + I Q + + Sbjct: 340 --------LAKPLADFLPQLET--VTFQEDLGSVRAKVTRIGNIAQVICQQLGLGETETK 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V+RA +L KADL T++V EFPELQG +G++YA+ E+ AI EH PR + +P Sbjct: 390 RVERAALLCKADLVTQMVYEFPELQGIMGEKYALASGEDEEVAKAIFEHYLPRNADDILP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 T I V LAD+LDTLI+ + + PSGS DP+ALRRA GI+ I + I L + Sbjct: 450 TTLIGKIVGLADRLDTLISIFGLGLIPSGSSDPFALRRAANGIVNITWVANLPINLEYLL 509 Query: 530 EDQN-----------------LILFFHDRLK-LYLHDRDIRHDLIEAILRPEN------- 564 E L FF R++ L ++ I +DL+ A+L ++ Sbjct: 510 EYTATSFAHTFHKDGQSLISILREFFIQRIRTLLQEEKHIDYDLVNAVLGEQDPEYIERA 569 Query: 565 -DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLL 621 +LL I D +L + + EK + R ++ A + +++ + I+ Sbjct: 570 LQDLLDIRDRAAYLQQIRHNGTLEKIYETINRSTRLAAQGDLDLQQLIPDKLINSTLFQK 629 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVR 678 +E LY + Q + + Y + L I + FF D VLV + +++ Sbjct: 630 SSETALYQALVALVPQTQLAQQTRNYQLLIAALEKIAPTVSQFFDGEDSVLVMDPNPDIK 689 >gi|221200098|ref|ZP_03573141.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2M] gi|221206749|ref|ZP_03579761.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2] gi|221211279|ref|ZP_03584258.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD1] gi|221168640|gb|EEE01108.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD1] gi|221173404|gb|EEE05839.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2] gi|221180337|gb|EEE12741.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2M] Length = 699 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 199/714 (27%), Positives = 335/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + L L ++ +Y TP RL + ++ + +P++ E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPDRQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G ++ ++++ K + + + D Sbjct: 79 VLPVSVALDAQGNPTAPLAKKLAALGHPNLTIAELERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--SDVQFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + ++ Y L + V+ R+ I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIRHASAYAETLRDKGRVIAHFGDRKETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPDALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDIGGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ RV R+ L +IA I ADVA RA L+KADL Sbjct: 349 KPLAARVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADVAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDTLPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R+++E ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLIEKQLPLDLVSLLRTAYARFEGVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ FF DRL+ L +R ++A+L L +V + + EF A+ E Sbjct: 527 AESTDAIVAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRLDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNADDPALRANRLALLSALHQQMNCVADISKL 697 >gi|254247265|ref|ZP_04940586.1| Glycyl-tRNA synthetase, beta subunit [Burkholderia cenocepacia PC184] gi|124872041|gb|EAY63757.1| Glycyl-tRNA synthetase, beta subunit [Burkholderia cenocepacia PC184] Length = 699 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 201/714 (28%), Positives = 334/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + + L +I +Y TP RL + ++ + +P+K E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELVFERYATPRRLAVVVQNVRAVAPDKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNASIADLERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + A+ K+P PK M + S ++RP+ + + ++++ + + Sbjct: 139 LQAALDEALAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGV 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ +L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPQL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADTAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAHARFAGVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEIDAVLSLNPTRIDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKL 697 >gi|167579892|ref|ZP_02372766.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis TXDOH] Length = 699 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 201/714 (28%), Positives = 337/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + ++ + + L +I +Y TP RL + ++ + +PE+ E+ Sbjct: 19 PPKALARLSDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + P + + Sbjct: 79 VLPVSVALDAQGKPTAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYASPGATLAEG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLSAL-----HDDRIVPVCAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q + Y L + VL R+ AI A+A G + Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHANAYADTLRDKGRVLAHFAGRKEAIRAQLE--ANADGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETK-TPDEIVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+Q R+ R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSQLARIERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDIAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTTYERFAAVPDV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF +RL+ L +R ++A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFVERLRGLLRERGYTAGEVDAVLSLNPTRLDDIVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P + AEK L +++ +Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSESGANGAVQPALFVEAAEKALAEQLAEVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FFD V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDAFFDGVMVNAEDPALRANRLALLSALHQQMNCVADISKL 697 >gi|170734064|ref|YP_001766011.1| glycyl-tRNA synthetase subunit beta [Burkholderia cenocepacia MC0-3] gi|169817306|gb|ACA91889.1| glycyl-tRNA synthetase, beta subunit [Burkholderia cenocepacia MC0-3] Length = 699 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 201/714 (28%), Positives = 334/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + + L +I +Y TP RL + ++ + +P+K E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELVFERYATPRRLAVVVQNVRAVAPDKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNASIADLERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + A+ K+P PK M + S ++RP+ + + ++++ + + Sbjct: 139 LQAALDEALAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGV 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ +L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPQL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADTAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAHARFAGVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEIDAVLSLNPTRIDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSEGGANGAVEPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKL 697 >gi|206559296|ref|YP_002230057.1| glycyl-tRNA synthetase subunit beta [Burkholderia cenocepacia J2315] gi|198035334|emb|CAR51209.1| putative glycyl-tRNA synthetase beta chain [Burkholderia cenocepacia J2315] Length = 699 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 201/714 (28%), Positives = 335/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + L L ++ +Y TP RL + ++ + +P++ E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPDRQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNLSIADLERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + A+ K+P PK M + S ++RP+ + + ++I+ + + Sbjct: 139 LQAALDEALAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRIVPVTAFGV 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ +L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPQL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADTAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAHARFNGVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEIDAVLSLNPTRIDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKL 697 >gi|83719744|ref|YP_441141.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis E264] gi|167617966|ref|ZP_02386597.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis Bt4] gi|257140197|ref|ZP_05588459.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis E264] gi|83653569|gb|ABC37632.1| glycyl-tRNA synthetase, beta subunit [Burkholderia thailandensis E264] Length = 699 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 201/714 (28%), Positives = 337/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + ++ + + L +I +Y TP RL + ++ + +PE+ E+ Sbjct: 19 PPKALARLSDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + P + + Sbjct: 79 VLPVSVALDAQGKPTAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYASPGATLAEG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLSAL-----HDDRIVPVCAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q + Y L + VL R+ AI A+A G + Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHANAYADTLRDKGRVLAHFAGRKEAIRAQLE--ANAGGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETK-TPDEIVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+Q R+ R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSQLARIERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEAEDVAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTTYERFAAVPDV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF +RL+ L +R ++A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFVERLRGLLRERGYTAGEVDAVLSLNPTRLDDIVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P + AEK L +++ +Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSESGANGAVQPALFVEAAEKALAEQLAEVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FFD V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDAFFDGVMVNAEDPALRANRLALLSALHQQMNCVADISKL 697 >gi|78067498|ref|YP_370267.1| glycyl-tRNA synthetase subunit beta [Burkholderia sp. 383] gi|77968243|gb|ABB09623.1| glycyl-tRNA synthetase beta chain [Burkholderia sp. 383] Length = 699 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 204/714 (28%), Positives = 336/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + L L ++ +Y TP RL + ++ + +PEK E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNLSIADLERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRIVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGHVIAHFVDRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ +L +VV+H K+G+ RV R+ L +IA +I AD L RA L+KADL Sbjct: 349 KPLADRVPQL--ANVVYHNKLGSALARVERLEALAGEIAPVIGADATLAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLKSLLRTAHARFEGVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ FF DRL+ L +R I+A+L + +V + + EF A+ E Sbjct: 527 AESTDAILAFFMDRLRGLLRERGYSAGEIDAVLSLNPTRVDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K S + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSEGGASGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKL 697 >gi|167835498|ref|ZP_02462381.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis MSMB43] Length = 699 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 205/714 (28%), Positives = 336/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + ++ + + L +I +Y TP RL + ++ + +PEK E+ Sbjct: 19 PPKALARLSDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + P + D Sbjct: 79 VLPVSVALDAEGKPSAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----RDDRIVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L E VL R+ AI A+A G + Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHASAYADTLREKGRVLAHFAGRKEAIRTQLE--ANANGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI + I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIGTK-TPSEIIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+Q RV R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSQLARVERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +P +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACSEHYRPRFSGDALPATPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L L IV + + EF A+ E Sbjct: 527 AESTDAIYAFFVDRLRGLLRERGYTAGEVDAVLSLNPTRLDDIVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P + AEK L ++D +Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSESSANGAVQPALFVEAAEKALAEQLADVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FFD V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDAFFDGVMVNAEDPALRANRLALLSALHQQMNCVADISKL 697 >gi|312875593|ref|ZP_07735594.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2053A-b] gi|311088847|gb|EFQ47290.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2053A-b] Length = 689 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 206/731 (28%), Positives = 349/731 (47%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKEIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNG-NSDYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L V FH KIG+ E++ R++ +G+ I + I+ ++A Sbjct: 335 -------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKPIGEYIGKKINLSSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S R+ IL K + + +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRVANILK---KADFSEAGQINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLL------LDKSLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|294667522|ref|ZP_06732738.1| glycyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602751|gb|EFF46186.1| glycyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 720 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 199/756 (26%), Positives = 332/756 (43%), Gaps = 93/756 (12%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G + + + TP RL + Sbjct: 1 MSEHFPLLIELGTEELPVKALPGLAQAFFDGVLSGLEKRGVAITRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGKPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P D+L I+ AI +P PK MRW +++ RP++ ++ + + Sbjct: 119 FVHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGS 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E +I +L + IT GHRF + + + YI L A VL+DP+ RR I Sbjct: 174 E-----VIPAELLGVRGDRITRGHRFMHEGAVSLAAPGEYIDALRSAHVLVDPDARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +++ A+ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VDEVQAAATQAGGSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGKLTEQFIGIANIQSKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L L V + AK+G+ ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLQAMGEGL--ASVTYQAKLGSVADKVARVAALAEAIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDESYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L + Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKYW 505 Query: 529 IEDQNLI-------------------------------------------LFFHDRLKLY 545 I +++ F DRL+ Y Sbjct: 506 IVFSHILAARAYGELGLDGQVDKLKKELNESTAEQMVDRPIEQNELKFFYDFIVDRLRGY 565 Query: 546 LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK 605 D+ + A+ +L I + F + E + KRI IL K Sbjct: 566 YADKGVPATHFNAVAELRPASLYDFDRRIDAIGIFAQLPEAEALAAANKRIRNILR---K 622 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 EI +I L AE L + +++ Y + L + ++ FF Sbjct: 623 VEGEIPGDIDTTLLREPAEVALAEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFF 682 Query: 666 DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D V+VN DD ++R NRL+LL+ + + V ++ + Sbjct: 683 DGVMVNADDPQLRANRLALLKKLGERLGSVAAIEHL 718 >gi|145590043|ref|YP_001156640.1| glycyl-tRNA synthetase subunit beta [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048449|gb|ABP35076.1| glycyl-tRNA synthetase beta chain [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 712 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 203/734 (27%), Positives = 345/734 (47%), Gaps = 67/734 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGL 59 L+E+++EE+P + + S + G LK G+ + + + TP RL + + + Sbjct: 11 ATLLIEVFTEELPPKSLRRLGTSFSEGIFGALKAAGLTTESSKVTSFATPRRLAVQITDV 70 Query: 60 SPHSPE-KIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLA 111 + + + E+L P G + L + G + ++K K + Sbjct: 71 LSQANDYPVREKLLPTSIAFDADGKATPPLLKKLSALGYADLDLSTLEKAGEGKNEALFL 130 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWS--TTHSPISAFSWIRPLKSILCILVAE 169 + +E +T + + K+P K M + + ++ + RP I+ + Sbjct: 131 NVIAKGAALEQTAQTALNQTLSKLPIAKMMHYQVLQKNGQLADVQFARPAHRIIAL---- 186 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAI 228 + I+++ I N T GHRF AP I + D Y LE +A VL + RR I Sbjct: 187 -HGDTILNMSSLGIDASNQTEGHRFLAPGVITITDADQYENTLEKQANVLASFDKRRTQI 245 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + A A ++ + LL+E+ LVEW ++ FD+++L +P+E + LT++TNQK Sbjct: 246 ETQLLKAAGAD--LVLMPESLLDEVTALVEWPAIYECHFDEEFLEVPQECLILTMQTNQK 303 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F + G L N F++VSNI+ + AI+ GN RVV RL DA F+++DQ Sbjct: 304 YFALTDQHGKLRNRFLVVSNIET-NKPDAIISGNERVVRPRLSDARFFFQQDQ------- 355 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + L R++ L VV+H ++G Q +R R++ + IAQ + D Sbjct: 356 -------------KRSLASRVSDLGR--VVYHNQLGNQLDRTKRVQEIAIGIAQKLQVDD 400 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L RA ++K DL T++V EFPELQG +G+ YA E+ A EH PR +++ Sbjct: 401 KLASRAAEIAKTDLLTDMVGEFPELQGIMGRYYANHDGESAEVAAACSEHYMPRFAGDSL 460 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TL+ W + P+G KDPYALRR LGI R++LE + L + Sbjct: 461 PATQTGTILAIADKLETLVGIWGVGLAPTGDKDPYALRRHALGICRLLLEKNFSLSLPEL 520 Query: 529 IE----------------DQNLILFFHDRLKLYLHDRD-----IRHDLIEAILRPENDNL 567 IE + F DRL+ YL D+ I+A+L + Sbjct: 521 IELARSQFPQKEVQEKADAAAIYEFIIDRLRAYLRDQSVAGKPFTSAEIDAVLSQAPAQI 580 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 ++ + L EF + + + + KRI IL K I S + L + AE L Sbjct: 581 NDLIGRLSALREFNALPQAAQLAAANKRISNILK---KTATPIPTACSSKLLQIPAEIEL 637 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + + + + +++ ++ L ++ PI+ FF V+V ++E+RDNRL+LLQ Sbjct: 638 FQALEAITPALNAAYEQRQFVELLKALVALSAPIDQFFADVMVMDPNQELRDNRLALLQQ 697 Query: 688 IKNIILIVINVQKI 701 + + +V ++ K+ Sbjct: 698 LHQKMNLVADLGKL 711 >gi|116511935|ref|YP_809151.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris SK11] gi|123320411|sp|Q02Z93|SYGB_LACLS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116107589|gb|ABJ72729.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris SK11] Length = 673 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 213/717 (29%), Positives = 343/717 (47%), Gaps = 63/717 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIPA + + L+ + L E + + + ++ TP RL L ++GLS Sbjct: 1 MTNYLLEIGLEEIPAHLVTPSINQLAERMEAFLNENRLKFDKIIKFSTPRRLALIVEGLS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE GP G KAI GF R G KGD Y A Sbjct: 61 ESSEAIDEEVKGPSAKIAKDAEGNWSKAIQGFSRGQGATPDDLIL------KGDYYYAKK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++L + I K+ + M+W F ++RP++ I+ +L ++ Sbjct: 115 HVDGVKAEEILSKVGDEVIAKMTFSTYMKWGNND-----FLFVRPIQWIVSLL-----ED 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I+ DL ++ + GHRF A I++++ + Y + E VL+D E R+ I Sbjct: 165 EIVAFDLLDVTANRFSRGHRFLANVEIELKNANDYASKMPENFVLVDAEHRKAEISAQIL 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LAS ++ KDLLEE+ +VE+ F+GSFD KYL +P E++ +++ NQ+ F Sbjct: 225 ALASENNWQVTLHKDLLEEVNNIVEYPTAFVGSFDPKYLSVPAEVLVTSMRDNQRYFEVY 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG LA FI V N A + +V GN +V+ ARLEDA FWK DQ Sbjct: 285 NQEGQLAPNFISVRNGNA-EHIENVVLGNEKVLVARLEDAEFFWKEDQKL---------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVAL 410 ++ +A+L V FHAKIG+ E ++R +++ K+A L D + Sbjct: 334 ----------KIEDLVAKLG--KVTFHAKIGSITEHMARTKLIAAKLADIAGLTDEEKVD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V R+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 382 VARSAEIYKFDLLTGMVGEFDELQGVMGEKYALLAGENANVAAAIREHYMPTSADGQLPE 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS---- 526 K+ ++ ADK+D++++F+ + PSGS DPYALRRA G+IRII + LS Sbjct: 442 TKVGSVLAAADKIDSVLSFFNVGLIPSGSNDPYALRRAVQGLIRIIEKMNWHFDLSLFID 501 Query: 527 --QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + ++ F R++ L ++ R+D++EA + N ++ +++ ++ Sbjct: 502 QFEGQNHAEILEFVKARVQKLLLEKLDRYDIVEAAINSSNFDITNMMESAFVIDGHKLHE 561 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + + + R ++ EI+P + E+ LY + Sbjct: 562 PFKPAIENVSRSINLVKKAADI-----AEINPALFEEDTEQALYDAVISLQNQWTYKPCE 616 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +++ I L IE FFD V+V +D VRDNR++LL + + ++ + I Sbjct: 617 EKFRAIVHTLA---PAIEAFFDNVMVMAEDLAVRDNRIALLSEVVALTSVMADFSLI 670 >gi|282899452|ref|ZP_06307419.1| Glycyl and Arginyl tRNA synthetase [Cylindrospermopsis raciborskii CS-505] gi|281195716|gb|EFA70646.1| Glycyl and Arginyl tRNA synthetase [Cylindrospermopsis raciborskii CS-505] Length = 716 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 188/720 (26%), Positives = 315/720 (43%), Gaps = 73/720 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + +L+ G+ + + + TP RL + + GL Sbjct: 1 MTAFLLEVGTEELPASFLSSAITQWRSRIPQMLEAHGLPIEKVAVFGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP G KA +GF + G++ + + KGD + Sbjct: 61 SQQLDREEEIKGPPAQAAFKDGKPTKAAEGFAKKQGVELSALE--VRSTDKGDFIFVNKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R I ++L +VP + + + MRW + + RP++ ++ +L + + Sbjct: 119 TPGRPITEILTELVPQWVWSLEGKRLMRWGSGDG-----RFSRPIRWLVALLDGDVLPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + + + K + I++ HR P + + Y++ L V++ PE R I+ +R Sbjct: 174 LRNGE-KIVKSDRISWVHRVLHPEAVSISHATEYVKTLANGYVIVSPEDREKIIVEQVNR 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +G LL E LVE+ +G F+ ++L LP E+ + T+Q+ F Sbjct: 233 AVEELGGCTEIYPYLLAETTNLVEYPTAVVGRFEDEFLQLPTEVSTTVMVTHQRYFPVFK 292 Query: 295 REG--VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L F+ +SN + I GN RV+ ARL D F++ D Sbjct: 293 NRDGRELLPNFVTISNGDPA-KSDIIALGNERVIRARLADGRFFYEAD------------ 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 L+K L++ + +L+ V F +G+ +V+RI + + I Q + + Sbjct: 340 --------LAKSLEEFLPQLET--VTFQEDLGSVRAKVTRIGNIAQVICQQLGLGETETE 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V RA +L KADL T++V EFPELQG +G++YA+ E+ AI EH PR + +P Sbjct: 390 RVQRAALLCKADLVTQMVYEFPELQGIMGEKYALASREDEEVAKAIFEHYLPRNADDILP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 T V LAD+LDTLI+ + + PSGS DP+ALRRA I+ I + I L + Sbjct: 450 TTLTGKIVGLADRLDTLISIFGLGLIPSGSSDPFALRRAANAIVNITWVANLPINLEYLL 509 Query: 530 EDQN-----------------LILFFHDRLK-LYLHDRDIRHDLIEAILRPEN------- 564 E L FF R++ L ++ I +DL+ A+L ++ Sbjct: 510 EYTATSFAHTFHKDAQSLISILQEFFIQRIRTLLQEEKHIDYDLVNAVLGEQDPEYIERA 569 Query: 565 -DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLEISPQYLLL 621 +LL I D +L + + EK + R ++ A + +++ I+P Sbjct: 570 LQDLLDIRDRATYLQQIRHNGTLEKIYETINRSTRLAAQGDLDLQQLIPDELINPTLFQK 629 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVR 678 +E LY + Q + + Y + L I + FF D VLV D ++ Sbjct: 630 SSETALYQALVALVPQTQLAQQTRNYQLLIGALEKIAPTVSQFFDGEDSVLVMDPDPHIK 689 >gi|254423532|ref|ZP_05037250.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. PCC 7335] gi|196191021|gb|EDX85985.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. PCC 7335] Length = 715 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 206/748 (27%), Positives = 334/748 (44%), Gaps = 81/748 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA +A + L ++ + + Y TP RL + + L Sbjct: 1 MATFLLEVGTEELPASFVSEAIAQWKSKIPTDLSQQFIESGQIEFYATPRRLAVLIHELP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P + EE GP G KA GF S G+ D ++ KG+ Sbjct: 61 ERQPTREEEAKGPPAKAAYKGGKPTKAATGFAASKGVSV--DQLEVRNTDKGEFVFVRQT 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R ++L+ +VP + + + MRW + RP++S++ +L + Sbjct: 119 IPGRQTAELLQAMVPEWVLGLEGSRFMRWGDGD-----LRFPRPIRSLVTLL-----DTQ 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I + L+ T GHR P + + + Y+ L+ A V +DP R+ IL+ Sbjct: 169 LIPVSLENGSEVCQSDRTTTGHRVLHPEKVSLDNAQDYVSALKSAYVTVDPLERKTIILD 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +AS+V V ++DLL E++ LVEW +G FD+++L LP ++ ++++Q+ F Sbjct: 229 QVAEVASSVDGHAVINEDLLAEVVDLVEWPTAIIGKFDEEFLALPSKVTITEMESHQRYF 288 Query: 291 VTRTREG--VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 R L FI VSN + A I QGN RV+ ARL D F+ DQ Sbjct: 289 PVRPSTDTDQLLPYFITVSNGDPA-KSALITQGNERVIRARLADGKFFFDADQ------- 340 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD- 407 +P + +L+ V F A++G+ E+VSRI + ++ + Sbjct: 341 -------------KQPFADYLPQLET--VTFEAQLGSVREKVSRIEKVTSLLSDQLGLSP 385 Query: 408 --VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 RA L KADL T++V EFPELQG IG++YA E + DAI EH PRG Sbjct: 386 KQKQQAIRAAQLCKADLVTQMVGEFPELQGYIGQKYAANSGEPAAVADAIYEHYLPRGAG 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +++P I V +AD+LDTL++ ++I + P GS DP+ALRRA +I I+ + + + L Sbjct: 446 DSLPQTLIGQVVGIADRLDTLVSIFSIGKLPKGSSDPFALRRAANAVITIVWDADLPLKL 505 Query: 526 --------SQFIEDQN----------LILFFHDRLKLYLHDR-DIRHDLIEAILRPEN-- 564 F + LI FF R++ L D +I +DL+ AI + Sbjct: 506 YPVLTQVVEDFAASREGVDPDALMALLIDFFDQRIRTLLQDNLEIDYDLVNAIFGQDKHY 565 Query: 565 -----DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQ 617 +LL + D L + A+ + R ++ E + E + P Sbjct: 566 QLRSLTDLLDVRDRATFLQSIRNDARLAVLYETVNRAAKLAVKGELDTDILDPEGIVDPT 625 Query: 618 YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDD 674 +E+ Y + Q + + Y ++ L + FFD V+V ++ Sbjct: 626 LFEQPSEQAFYDSLQTLLPQTQAAQAERDYSKLITGLEQAAPTVANFFDGDTSVMVMAEE 685 Query: 675 REVRDNRLSLLQYIKNIILIVINVQKIV 702 VR NRL+LL ++N ++ + +IV Sbjct: 686 TAVRQNRLNLLGLLRNHARVLADFGEIV 713 >gi|171464147|ref|YP_001798260.1| glycyl-tRNA synthetase, beta subunit [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193685|gb|ACB44646.1| glycyl-tRNA synthetase, beta subunit [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 712 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 206/734 (28%), Positives = 353/734 (48%), Gaps = 67/734 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGL 59 L+E+++EE+P + + + S + LK G+ ++ + + TP RL + + + Sbjct: 11 ATLLIEVFTEELPPKSLRRLGDAFSEGIFAALKSAGLATKSSKVTGFATPRRLAVQVTDV 70 Query: 60 SPHSPE-KIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLA 111 +P+ + E+L P G + L + G + ++K K + Sbjct: 71 LDQAPDFPVREKLLPTSNAFDAEGKATAPLLKKLSALGYADVDLSSLEKAGEGKNEALYL 130 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWS--TTHSPISAFSWIRPLKSILCILVAE 169 + +E + + + K+P K M + ++ + RP I+ + Sbjct: 131 NVIAKGAALEQTAQVALEQTLNKLPIAKMMHYQVPQKDGQLADVQFARPAHRIIAL---- 186 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAI 228 + I+++ I GN T GHRF AP + + + + Y DL+ +A V+ RR I Sbjct: 187 -HGDTILNISALGIHAGNKTEGHRFLAPGNVAIGNANQYESDLQSKAKVIPSFNQRRAKI 245 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + A ++ LL+E+ LVEW ++ FD+++L +P+E + LT++TNQK Sbjct: 246 EAAILKAAGDD--LVLMPDSLLDEVTALVEWPAIYECHFDQEFLEVPQECLILTMQTNQK 303 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F R+G L N F++VSNI+ + AI+ GN RVV RL DA F+++DQ Sbjct: 304 YFALTDRQGKLRNRFLIVSNIET-NKPNAIISGNERVVRPRLSDARFFFQQDQ------- 355 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 +PL R+A L VV+H ++G Q +R R++ L IA+ ++AD Sbjct: 356 -------------KRPLASRVANLG--KVVYHNQLGNQLDRTRRVQGLTVGIAKKLNADE 400 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L RA ++K DL T +V EFPELQG +G+ YA EN A EH P+ + + Sbjct: 401 KLASRAAEIAKTDLLTNMVGEFPELQGIMGRYYATHDGENADVASACSEHYMPQFASDAL 460 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TL+ W + P+G+KDPYALRR LGI R++LE + + L + Sbjct: 461 PQTQTGTILAIADKLETLVGIWGVGLAPTGNKDPYALRRHALGICRLLLEKNLSLSLPEL 520 Query: 529 IEDQ----------------NLILFFHDRLKLYLHDRD-----IRHDLIEAILRPENDNL 567 IE ++ F DRL+ YL D+ I+A+L E L Sbjct: 521 IELSRAQFPQADVQEKAKAADIYAFIIDRLRAYLRDQSVAGKAFTSAEIDAVLSQEPAQL 580 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 +++ + L EF + A+ + + KRI IL K I + S + L + AE L Sbjct: 581 NDLIERLTALREFNALAEAAQLAAANKRISNILK---KTTTAIPVTCSAKLLQIPAETAL 637 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + + + + +++ ++ L ++ PI+ FF V+V + E+RDNRL+LLQ Sbjct: 638 HQALETVAPALNAAYEKRQFVELLRSLVALSGPIDQFFADVMVMDPNSELRDNRLALLQQ 697 Query: 688 IKNIILIVINVQKI 701 + + +V ++ K+ Sbjct: 698 LHQKMNLVADLGKL 711 >gi|37521215|ref|NP_924592.1| glycyl-tRNA synthetase subunit beta [Gloeobacter violaceus PCC 7421] gi|35212211|dbj|BAC89587.1| glycyl-tRNA synthetase beta chain [Gloeobacter violaceus PCC 7421] Length = 724 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 202/742 (27%), Positives = 324/742 (43%), Gaps = 76/742 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+PA A L + L E + + ++ + TP RL + +GL Sbjct: 1 MATFLLEIGTEELPASFVPGALAQLEARVRSALAEAQITAETLKLFGTPRRLAVLAEGLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++ EE GP G +GF R G+ + +KG+V AV Sbjct: 61 ERQPDREEELKGPPARVAFDAGGRPTAQAEGFARKAGVAVGELS--VRATEKGEVVFAVR 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R R + +L +P I + P+ MRW+ + RP++ ++ ++ +E Sbjct: 119 RIEGRPVTQLLAEQIPEWITGLEGPRLMRWADGD-----LRFSRPIRWLVALVDSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ +++ + G + GHR P PI++ + Y L A VL DPE RR I Sbjct: 170 -VLPVEMAGVSAGRTSRGHRVLHPEPIELATAADYPAALTAAFVLADPEVRRERIRTGIA 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A +G E LLEE+ LVEW G F+ ++L LP +I+ + T+Q+ F Sbjct: 229 AVAEQLGAEAAVPAALLEEVNFLVEWPTAVAGQFESEFLSLPAPVIKTEMITHQRYFPLH 288 Query: 294 TREG--VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSN I +GN RV+ ARL D F++ D+ Sbjct: 289 QPGDPEALIPRFITVSNGDPRYS-ELIARGNGRVIRARLADGRFFFEEDR---------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADV 408 +PL++ + +L V F +G+ ERV R+ + + + Sbjct: 338 ----------KQPLEKFLGKLQ--SVTFQESLGSVAERVERLEAIALWLCGHLGLGGEQT 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV R L KADL T++V EFPELQG +G++YA L E C I EH +PR +++ Sbjct: 386 RLVARTAHLCKADLATQMVYEFPELQGLVGRDYARLDGEEPLVCAGIAEHYQPRNVEDDL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + V +AD+L+TL+ + + PSGS DP+ALRRA L ++RI + ++ L + Sbjct: 446 PASLTGQVVGIADRLETLVGIFGLGMLPSGSSDPFALRRAALTVVRIGWDTDFELDLVEA 505 Query: 529 IED-------------------QNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEND--- 565 + + L +F RL L +R + +DL+ A+L + Sbjct: 506 LGFTVELFVSRQLLKQPADTLLEQLCDWFAQRLYGLLVERDGLDYDLVLAVLGAVDTGYT 565 Query: 566 -----NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL 620 NL + + L S + +A R+ ++ + + Q + Sbjct: 566 RRALANLRALKLRLDTLVAARKSGLLAQIYETAVRVARLAGKAGIGDLTLE-HFDAQLVA 624 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 AE L + F + + + Y + L + + FFD V+V V D +R N Sbjct: 625 DPAEAALREAVQKFAATAEAAEAQEDYPALLGALGELAPQVSCFFDAVMVMVPDETLRTN 684 Query: 681 RLSLLQYIKNIILIVINVQKIV 702 RL LL I N +V ++V Sbjct: 685 RLRLLAVIDNNARRCFDVTQVV 706 >gi|326693036|ref|ZP_08230041.1| glycyl-tRNA synthetase subunit beta [Leuconostoc argentinum KCTC 3773] Length = 686 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 207/731 (28%), Positives = 332/731 (45%), Gaps = 76/731 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + ++ Y TP RL + L ++ Sbjct: 1 MSTFLLEIGLEEVPAHLVTPSEAQLVTRTAAFLAEHRLAVGEIKAYSTPRRLAVQLLDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G ++ Sbjct: 61 AESETLSEEKRGPSIDRAKDEQGNWTKAAQGFARGQGTTPED---FEERDG---YVWLTK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P ++L I + ++ + M+W+ +AF ++RP++ ++ +L + Sbjct: 115 TTPGVPAAEILAQIGDEVVAQMKFSTYMKWAN-----NAFLYVRPIRWLVALL-----DD 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K++D + ++ IT GHRF + + + + D Y+ L A VL+D E RR I Sbjct: 165 KVLDFSILDVQTDRITRGHRFLSNEQVTIPTADDYVETLRAAHVLVDAEERRATISQQLA 224 Query: 234 RLASAVGLELVED----KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A G L D +DLLEE+ +VEW F GSFD+KYL +P++++ +++ +Q+ Sbjct: 225 AIAQENGWVLQLDSDKSQDLLEEVNNIVEWPTAFAGSFDEKYLAVPDDVLMTSMREHQRF 284 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L F+ V N D ++ GN +V+ ARLEDA F+ DQ Sbjct: 285 FYVTDQSGQLLPHFLSVRNG-NDDHLGDVIAGNEKVLVARLEDAEFFYHEDQQ------- 336 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-- 407 K + MA+++ +VFH KIGT E + R+ +L ++A + D Sbjct: 337 -------------KTIADYMAKVE--KLVFHEKIGTVYEHMQRVGLLAAELADKLGFDDT 381 Query: 408 -VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A + RA + K DL T +V EF ELQG +G+ YA L EN + A+ EH P Sbjct: 382 KKADLARAADIYKFDLMTGMVGEFDELQGIMGEHYAQLFGENTAVATAVREHYMPTSAAG 441 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 V + I +++ADKLDTL++F+A N PSGS DPY LRRA GI+R + + I L+ Sbjct: 442 EVAQSDIGAVLAIADKLDTLVSFFAANLVPSGSNDPYGLRRAATGIVRTLQARQWRIALA 501 Query: 527 QFIEDQ--------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIV 571 +E + F DR++ D R DL+ A + +++ + Sbjct: 502 PLLESFIAKTGDVSSHADTTAIRAFILDRVRKLALDAGTRQDLVAAGTANVVNLDVVYVA 561 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ L + + S R+ ++ + + P EAE LYA Sbjct: 562 QRVQTLAQHADDTNFRDVIASLTRVSRLAVKY-----DTDATVDPALFENEAEVALYAAT 616 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 H + + L ++ PI +FD +VNVDD V++NR + L I + Sbjct: 617 QSLDLHTLVLAGSE---AVYQALANLQAPIAAYFDATMVNVDDEAVKNNRYAQLHLINRL 673 Query: 692 ILIVINVQKIV 702 I + +++KIV Sbjct: 674 ISGLGDLEKIV 684 >gi|124268564|ref|YP_001022568.1| glycine--tRNA ligase [Methylibium petroleiphilum PM1] gi|124261339|gb|ABM96333.1| Glycine--tRNA ligase [Methylibium petroleiphilum PM1] Length = 705 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 202/734 (27%), Positives = 342/734 (46%), Gaps = 64/734 (8%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLY 55 M D L+E++ EE+P + K E + L LK +G+ + + +P RL + Sbjct: 1 MSDTKNLLVELFVEELPPKALKKLGESFAQTLAESLKAQGLATEHSATTPFASPRRLAAH 60 Query: 56 LKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIK-KDPKKGD 107 + + P +P+K + ++L P G A+ L + G + +++ + K + Sbjct: 61 ISAVLPAAPDKAVSQKLMPVSVGLTADGQPTPALLKKLAALGADASALPRLECRPDGKAE 120 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSP---ISAFSWIRPLKSILC 164 P ++ L+ + A+ K+P PK M + ++ ++RP ++ Sbjct: 121 ALFFDSLVPGAMLAAGLQKALLEALAKLPIPKLMSYQLETGELPGWASVQFVRPAHGLVA 180 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPE 222 + A+ ++ + + T+GHRF A P+ +Q DHY + L++ V+ Sbjct: 181 LHGAD-----LVSVAALGLESRRETHGHRFEAQMDPVVLQHADHYAQQLQDQGAVIASFA 235 Query: 223 CRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLT 282 R I AS GL ++D LL+E+ LVE V +G F++ +L +P+E + LT Sbjct: 236 ARHGEIARQLQAAASKEGLVPIDDPALLDEVTALVERPNVLLGQFEESFLAVPQECLILT 295 Query: 283 IKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 +K NQK F G L + F++VSNI D +A+V GN RVV RL DA F+ +D+ Sbjct: 296 MKANQKYFPLLDATGRLTHKFLIVSNISPED-PSAVVGGNERVVRPRLADAKFFFDQDRR 354 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 K L+ R++ LD VV+H K+GTQGERV R+R + + I Sbjct: 355 --------------------KTLEDRVSGLDR--VVYHGKLGTQGERVERVRAIARAIGS 392 Query: 403 LIDADVALVDRAI--VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 + + L+KADL T++V EFPELQG +G+ YA AIE+H + Sbjct: 393 QLGGEALAAKADQAARLAKADLLTDMVGEFPELQGTMGRYYAQHDGLGDDIAFAIEDHYR 452 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR + +P N++ V+LADKL+TL+ + I + P+G KDP+ALRR LG+IR++ E Sbjct: 453 PRFAGDELPRNEVGTVVALADKLETLVGLFGIGQLPTGDKDPFALRRHALGVIRMLTEKA 512 Query: 521 IDIPLSQFIED-------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + + + ++ L F DRL L ++ R ++A+L L Sbjct: 513 LPLEVDALLKTALPAFGALIADPSSALAEFIFDRLAGSLREQGYRAQEVDAVLSLRPQRL 572 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + F + + + KR+ IL K + + ++ L AE L Sbjct: 573 GEVAQRLAAVRAFAALPEAPALAAANKRVGNILK---KVDGAVEPKVDAALLKEPAEAAL 629 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 ++ + + L ++ P++ FFD V+VN DD +R NRL LL Sbjct: 630 AQALAAVKPAADAAFARGDHAASLQSLAALKAPVDAFFDGVMVNADDPALRANRLGLLAT 689 Query: 688 IKNIILIVINVQKI 701 + + V ++ K+ Sbjct: 690 LHAAMNRVADLSKL 703 >gi|91204463|emb|CAJ70963.1| similar to glycine-tRNA ligase (beta-chain) [Candidatus Kuenenia stuttgartiensis] Length = 708 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 214/744 (28%), Positives = 345/744 (46%), Gaps = 83/744 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A + + K + +Q++ TP RL +++KGL Sbjct: 1 MTDLLFEIGTEEIPAGYITPALNQIKTLFGERFKYFRLTFQSIYCTGTPRRLVVFIKGLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 EE GP V G KA GF +S G+++ + K KG+ +A+ Sbjct: 61 EEQESVTEEIQGPSVAIAFDKAGNLTKAGLGFAKSQGIESNTLQT--KKTAKGEYCIAIK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +L I+ IQK +PKSM+W + + RP++S+L + Sbjct: 119 QITGEKTLHLLPGILEEIIQKTSFPKSMKW-----KTNNLFFARPIRSLLALF-----GN 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLD--HYIRDLEEAMVLLDPECRRNAILND 231 K++ L++ I GN+ GH F + I++Q D Y + L++ V++D RRN + Sbjct: 169 KVVPLEINGIKAGNVFSGHPFLSGKKIEIQVADWEQYKQLLKQEKVIVDIPERRNILKEK 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +L G D+ LL+E+ LVE+ SFD K+L +P+ +I +K +Q+ F Sbjct: 229 ITKLMKQHGATFD-DESLLDEVANLVEYPNAVTCSFDDKFLDIPDIVIETAMKEHQRYFP 287 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + +G L N FI V+ + +QGN RV+ ARL DA FWK D+ Sbjct: 288 VKKADGKLINKFI-VALNRDEPNENYPIQGNERVLKARLYDARFFWKEDR---------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID------ 405 PL++R+ L +VF K+G ER RI L +++ + Sbjct: 337 ----------KIPLEKRVEDLKQ--LVFLEKLGNYYERTGRIVALTDYLSKQLIRFNHPD 384 Query: 406 ---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 AD+ RA +L K DL T++V EFP LQG +G+EYA E + AIEEH PR Sbjct: 385 FSIADIDAAKRAALLCKTDLLTQMVGEFPSLQGIMGREYAAWDGEEPAVALAIEEHYLPR 444 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 + +P++ I V LADK DT+ +A+ P+GS+DPY+LRR GIIRII E+ Sbjct: 445 FAADKIPSSIIGAIVGLADKFDTISGCFALGLHPTGSQDPYSLRRHAYGIIRIIEEHGFT 504 Query: 523 IPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR- 561 + L + + + FF +RL ++ HDL+ A+L Sbjct: 505 LMLEEVLGQSLSILMSQTQSSLFTSDKLIPEIKNFFRERLFHTNIEKGCSHDLVNAVLNA 564 Query: 562 -PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL 620 D++ + +K ++ + +R F I + + +S L Sbjct: 565 GAGFDDMYDFLQRLKDVSMLSKEKYWPDLVSVVERTFNISKKVKGEGM-----VSTNLLN 619 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQI-GDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + E +L+ + + I+ + K+Y + EP+ FF++V VNV+D E+R+ Sbjct: 620 EKEELQLWEIYTANEAKIRTMIQDKKYVEASFTYNEVFAEPVHAFFEKVFVNVEDMEIRN 679 Query: 680 NRLSLLQYIKNIIL-IVINVQKIV 702 NRL LL+ I + + ++ +I+ Sbjct: 680 NRLLLLREINQLYSEKIADLSQII 703 >gi|317051556|ref|YP_004112672.1| glycyl-tRNA synthetase subunit beta [Desulfurispirillum indicum S5] gi|316946640|gb|ADU66116.1| glycyl-tRNA synthetase, beta subunit [Desulfurispirillum indicum S5] Length = 693 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 196/732 (26%), Positives = 314/732 (42%), Gaps = 71/732 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLE+ +EEIPA + E + + R TP RL L L+G Sbjct: 1 MSTQDILLELGTEEIPAGFIDDLLLQMERFSAKWFGERNISFATARTMGTPRRLTLILEG 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ +E LGP G +A +GFLRS G K+ KG+ Sbjct: 61 VAVSGYATTQELLGPARNIAYDANGQLTRAGEGFLRSKGFAASDA--YVKETSKGEYLAV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + R+ VL I+ + KSM+W + F + RPL+ I Sbjct: 119 MQRQEAVQTMAVLPQFFEELIRSLSCRKSMQWGSG-----TFRFARPLRHIAAFF----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + +D ++ + G TYGHRF I +Q Y LE V++D RR I Sbjct: 169 GTQAVDFAMEGLRSGGTTYGHRFLGSREIALQGASSYQTQLEAQQVIVDISRRRAMIQEA 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A G ++ + L+ LVE+ +G FD+++L LP EL+ +T++ +QK F Sbjct: 229 CDAVAKQHGGRVIGGESLVNLTSHLVEYPVAVVGDFDERFLRLPRELLIVTMREHQKYFA 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI +SN+ D + I +GN RV+ ARL DA ++ D Sbjct: 289 LEDAGGRLLPHFITISNMPIDDTSS-IKRGNERVLRARLSDAEFYYDED----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 L PL R A+LD VVF ++G+ G++V RI + +AQ + Sbjct: 337 ---------LKTPLASRKAQLD--KVVFQEQLGSIGQKVERIAGIADALAQAAGLSESQR 385 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + +LSK DL + +V EFPELQG +GKEYA + + + I EH PR + + Sbjct: 386 ADIATLALLSKCDLVSGMVYEFPELQGVMGKEYAAQEGYSETVSRGIMEHWFPRHAGDTL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P++ + VS+ADK+DT+ + I PS S DPYALRR LGI+ + K+ + L Sbjct: 446 PSSMEAAMVSIADKMDTIAGCFGIGLLPSSSNDPYALRRQALGILHTLSHWKLSVSLDAV 505 Query: 529 IED-----------------QNLILFFHDRLKLYL-HDRDIRHDLIEAILRPENDNLLTI 570 I + + F R K++ HD++E++ +++T+ Sbjct: 506 IHMALQRLAKVISRESRQVAEEIANFIIQRSKVFFTTTEGFDHDVVESVFSGRFSDVITV 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 ++ L S + + +R I+ S ++ +E L Sbjct: 566 SRKLQALQSLKSRQDYRSVVETFRRAVNIIP------EGFSGSVNAALFQHASEGELLGR 619 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + + + + + + ++ FD V+V D VR+NRL+LLQ + Sbjct: 620 LDAVLPQALDCVKKNDFDGVFGIALQLKPHVDKLFDNVMVMDKDVTVRNNRLALLQQVGQ 679 Query: 691 IILIVINVQKIV 702 + V + K+V Sbjct: 680 LFSGVADFSKLV 691 >gi|289668590|ref|ZP_06489665.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 731 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 196/767 (25%), Positives = 329/767 (42%), Gaps = 104/767 (13%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G + + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLAQAFFEGVLSGLEKRGVAITRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAAGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P ++L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGT 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I Sbjct: 174 E-----VIPAELLGVRGDRITRGHRFMHEGTVSLAAPGDYVEALRAAHVLVDPDARRTRI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 IEEVEAAAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGKLTEQFIGIANIQSKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L L V + AK+GT ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLQAMGDGL--ASVTYQAKLGTVADKVARVAALAEAIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VHARRAAQLAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ- 527 + + +++AD+LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ + Sbjct: 446 ALSPLGKVLAIADRLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDVKAT 505 Query: 528 ---------------------------------FIEDQNLILFFHDRLKLYLHDRDIRHD 554 + F DRL+ Y D+ + Sbjct: 506 LVIAVKLLPWDRLVRKATLKDEETIAAIDSAQYAQLTSEVFDFILDRLRGYYADKGVPAT 565 Query: 555 LIEAILRPEN--------------------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 A+ + +L I + F + + E + K Sbjct: 566 HFNAVAALFSVAPEGAPTAHGVGASLGATHGSLYDFDRRIDAIGSFATLPEAEALAAANK 625 Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 RI IL K EI +I L AE+ L + +++ Y + L Sbjct: 626 RIRNILR---KVEGEIPGDIDTSLLREPAEEALAEAVEAAIGDTGDALHRHDYVAVLARL 682 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ + Sbjct: 683 ARLRPQVDAFFDAVMVNAEDPQLRANRLALLKKLGDRLGSVAAIEHL 729 >gi|116618293|ref|YP_818664.1| glycyl-tRNA synthetase, beta subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122271507|sp|Q03WY1|SYGB_LEUMM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116097140|gb|ABJ62291.1| glycyl-tRNA synthetase beta chain [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 685 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 202/730 (27%), Positives = 336/730 (46%), Gaps = 75/730 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + + Y TP RL + L ++ Sbjct: 1 MSTFLLEIGLEEVPAHLVTSSENQLIERTRNFLAEHRLTVGAINPYSTPRRLAVELTDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G + + G Sbjct: 61 EKSESLSEEKRGPSIERAKDANGEWTKAAMGFARGQGATPDD-----FETRDG-YVWLTK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +D+L I + ++ + M+W+ +AF ++RP++ ++ + + Sbjct: 115 HTEGVPAKDILVKIGAEVVSEMKFSTYMKWAN-----NAFLYVRPIRWLVALF-----DK 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++D + ++ G +T GHRF + +++ S D Y+ LE A V+++ E R+NAI + Sbjct: 165 EVVDFHVLDVQTGRVTRGHRFLSNEHVEISSADDYVSKLESASVVVNAEVRKNAIRSQLT 224 Query: 234 RLASAVGLELVEDKD----LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A L D D LLEE+ +VEW F G+FDKKYL +P+E++ +++ +Q+ Sbjct: 225 AIAKQNNWSLELDTDAAQNLLEEVNNIVEWPTAFAGTFDKKYLEIPDEVLITSMREHQRF 284 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +G L F+ V N + ++ GN +V+ ARLEDA F+K DQ Sbjct: 285 FFVTNHDGKLLPHFLSVRNG-NKEHLDNVIAGNEKVLVARLEDAEFFYKEDQT------- 336 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K + M ++ +VFH KIGT E + R VL + +AQ ++ D Sbjct: 337 -------------KTIADYMEKVK--KLVFHEKIGTVYEHMQRTGVLAQALAQSLNFDEQ 381 Query: 410 L---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V RA + K DL T +V EF ELQG +G+ YA L EN + AI+EH P Sbjct: 382 QLSNVSRAAEIYKFDLMTGMVGEFDELQGIMGEHYAKLFGENPAVAAAIKEHYMPTSATG 441 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 + + I +++ADKLD ++ F+A + PSGS DPY LRRA GI+R + E I L Sbjct: 442 KIAESDIGAVLAVADKLDAIVTFFAADLTPSGSNDPYGLRRAATGIVRTLQEKNWHIALK 501 Query: 527 QF-------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIVD 572 + ++ F DR++ D +R DL+ A + R N +++ ++D Sbjct: 502 PVLTQFAQSQGEVAAADITAVLEFILDRVRKLTLDDGVRQDLVSAGVSRSGNTDVVYLID 561 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 I L + S R+ ++ + + + P +AEK LY Sbjct: 562 RINVLAAHSKDNDFRDVIESLTRVDRLAVKQLTND-----SVDPSLFENDAEKELYQATY 616 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + ++ L + PI +F+ +VN ++ V++NR + L I +I Sbjct: 617 AL--NLSHLVKEGA-DEVYTTLAGLQSPISTYFEATMVNTENAAVKNNRYAQLNVIHRLI 673 Query: 693 LIVINVQKIV 702 + ++++IV Sbjct: 674 SELGDLEQIV 683 >gi|303231466|ref|ZP_07318197.1| glycine--tRNA ligase, beta subunit [Veillonella atypica ACS-049-V-Sch6] gi|302513903|gb|EFL55914.1| glycine--tRNA ligase, beta subunit [Veillonella atypica ACS-049-V-Sch6] Length = 683 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 196/728 (26%), Positives = 332/728 (45%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL Sbjct: 1 MAKDLLFEIGAEEIPAGFMPNILGQLKQLAETKLNDAHLPFESIATYGTPRRLALIVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + S E E GP G KA GF R GL + +D A Sbjct: 61 ADTSAEISERHKGPSASIAYDAEGNATKAAIGFARGKGLDVAD--LVVEDG----YIYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ ++P I + +PKSM W + ++RP++ ++ +L Sbjct: 115 TKTAGVPAKDIVTDMLPQLITGLNFPKSMHWGNLDA-----KFVRPVRWLVALL-----D 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 165 EEVIPVEFATVKSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 225 HDIAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L F+ V N + + GN RV+ ARL+DA F+ D+ Sbjct: 285 VDQDGKLLPMFLTVRNG-SDHSIEVVQAGNERVLRARLDDAKFFFNEDR----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-- 410 KPL R L +VF +G ++ R+ LG ++ + Sbjct: 333 ---------KKPLIDRQDGL--TKIVFQEGLGNLADKTERLLTLGHVFSEECELHEDARV 381 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 ++RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + +P Sbjct: 382 VLERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESPEVAEAIFEQYLPRFAGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L I Sbjct: 442 QTEAGKVLSIIDKIDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLNSEWNISLRPII 501 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + F RLK DR++ H +I+ +L ++ L Sbjct: 502 VESMNLLNVPADKQDELLGQVEEFITLRLKNIFLDREVPHHVIDLLLSNNELSVADAEGL 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K L + + + R++ ++ + L +AE+ LY + + Sbjct: 562 VKALLANRIDEN-VELVQAFTRMYNLVK------DVTYTGVDKSLLKEDAERALYEMATK 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ D Y + + ++ I FF+ V+V D ++ NRL L++ +++ Sbjct: 615 ASEASIDAWDKNDYDAVVAVPATLVPGINKFFEDVMVMDKDEAIKANRLQLVRLAYSVMA 674 Query: 694 IVINVQKI 701 I+ ++ + Sbjct: 675 IIGDISAL 682 >gi|114328763|ref|YP_745920.1| glycyl-tRNA synthetase subunit beta [Granulibacter bethesdensis CGDNIH1] gi|114316937|gb|ABI62997.1| glycyl-tRNA synthetase beta chain [Granulibacter bethesdensis CGDNIH1] Length = 684 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 241/705 (34%), Positives = 371/705 (52%), Gaps = 51/705 (7%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ KA EDL + L + + +++R + P RL L + P + G Sbjct: 13 IPARMQVKAGEDLVRLAGEALAD--LSPRDLRWHVGPRRLALTAT-VEAGVPARSGNERG 69 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 PR+GA ++A+ GFLR G + + +GD ++ P R ++ ++P + Sbjct: 70 PRIGAPEQALAGFLRKYGADRSALRE------EGDYWVLDTSSPGREAAALIAEVIPALL 123 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK--IIDLDLKEIPCGNITY 190 K PWPKSMRW S F+W+RPL+ ILC L D D + G+ T Sbjct: 124 WKFPWPKSMRWG----GSSLFTWVRPLRRILCQLDGAVVPFSLAQGDDDGHGLRSGDETE 179 Query: 191 GHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 GHRF +P +KV+ + + L V+LD E RR + R+A+A GL +V+D L+ Sbjct: 180 GHRFLSPGAVKVRGIAEWQAALAGRHVVLDIEERRRRVAEGIARVAAAHGLTVVDDPGLV 239 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQ 310 +E+ GLVEW +G D +Y+ LP E+++++++ NQ+ F R EG A F ++NI+ Sbjct: 240 DEVAGLVEWPVPLLGRIDDQYMSLPAEVMQVSMRVNQRYFALRDAEGKAAPYFAFIANIE 299 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 A+D G AI+ GN RV+ AR DA HFW +D+ +PL R+A Sbjct: 300 ATDQGRAIMAGNERVLRARFADARHFWDQDR--------------------KEPLASRLA 339 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 L+ V +HAK+G+Q V+R+R L ++IA L+ AD D A +L+KADL T +V EF Sbjct: 340 VLER--VTYHAKLGSQAALVARLRRLAREIAPLVGADARDADGAALLAKADLTTGMVGEF 397 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +G+ YA+ E+ DAI +H P+GP + VP +SI V+LADK+D L F+ Sbjct: 398 PELQGVMGRYYALHDGESPWIADAIRDHYAPKGPSDPVPDAPVSIAVALADKIDRLAMFF 457 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------NLILFFHDRLK 543 +I E P+GS DP+ALRRA LGIIRII EN + +PL + +L+ F +RL+ Sbjct: 458 SIGEAPTGSGDPFALRRAALGIIRIIRENGLRLPLGRLFAFASDEAPVADLLAFMAERLR 517 Query: 544 LYLHDRDIRHDLIEAILRPENDN-------LLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 + L RHD++ A+ D+ ++ ++ + S G L + KR Sbjct: 518 VQLRAEGARHDVLAAVFAVHADDTAEGAGDIVRLLARADAVAALLVSEDGANLLAAYKRA 577 Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 IL IE++K+ L + E+ L + + + ++D + L Sbjct: 578 ANILRIEDRKDGPHQGTPDESLLEVPEERALAEALQEAEPAVMAALDAEDDATAMASLAR 637 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + P++ FFDQV VN ++ +R NRL LL +++ + V + +I Sbjct: 638 LRGPLDAFFDQVTVNAEEPALRRNRLRLLSRLRDTMNRVADFSRI 682 >gi|312871720|ref|ZP_07731808.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 3008A-a] gi|311092662|gb|EFQ51018.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 3008A-a] Length = 689 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 206/731 (28%), Positives = 350/731 (47%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNG-NSDYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ ++A Sbjct: 335 -------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S R+ IL K + + +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRVANILK---KADFSEAGQINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLL------LDKSLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|257469009|ref|ZP_05633103.1| glycyl-tRNA synthetase beta chain [Fusobacterium ulcerans ATCC 49185] gi|317063256|ref|ZP_07927741.1| glycyl-tRNA synthetase subunit beta [Fusobacterium ulcerans ATCC 49185] gi|313688932|gb|EFS25767.1| glycyl-tRNA synthetase subunit beta [Fusobacterium ulcerans ATCC 49185] Length = 690 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 185/728 (25%), Positives = 343/728 (47%), Gaps = 73/728 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EE+PAR ++A +DL L LK+ + +++++ Y TP RL L + L Sbjct: 3 LLFEIGMEELPARFLNQALKDLKNNLEAKLKDGRISFKDIKTYGTPRRLVLDVHELGEQQ 62 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + +GP G +A GF +S G++ + KG+ A Sbjct: 63 EDLNIVNMGPAKNVAYGSNGEISRAGLGFAKSQGIEAEDLEIV--STPKGEYIAARKFMK 120 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +++L I+ + ++ + KSM WS + RP++ L + +++ Sbjct: 121 GKETKELLPEILKSLVLELNFQKSMTWSDKK-----LRFARPVQWFLALC-----DNEVV 170 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 +++ + GN + GHRF +V ++D Y + E V++D E R+ I + Sbjct: 171 KFEIEGMESGNKSRGHRFFG-KEFEVNTIDEYFEKIRENNVIIDIEERKALIKKLINENC 229 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + G +++ + +LL+E+ L+E+ +GSF+ +L +P+E++ ++++ +Q+ F Sbjct: 230 TNSGEQVLVEDELLDEVTNLIEYPCPIVGSFNSDFLEVPQEVLIISMEVHQRYFPILDSN 289 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L F++V N + + +GN +V++ARL DA F++ D Sbjct: 290 GKLLPKFVVVRNGV--ETSEQVRKGNEKVLSARLADARFFYQED---------------- 331 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PL + +L VVF +GT ++ R + K + + + + R Sbjct: 332 ----LKSPLADNIEKLKT--VVFQKDLGTIYSKIERATEIAKYLIDTLGYNDRKDSILRT 385 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 ++L+KADL + ++ +EF +LQG +G +YA+ E I+EH PR +N+PT Sbjct: 386 VLLAKADLVSNMIGEKEFTKLQGFMGADYALKSGEGEKVSLGIKEHYYPRFQGDNLPTEL 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I ++D+LDTL+ + + PSGSKDP+ALRRA LGI+ +IL + +DI L E Sbjct: 446 EGIVAGISDRLDTLVGCFGVGVIPSGSKDPFALRRAALGIVNVILNSGLDISLKALTEKA 505 Query: 533 -------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ++ FF R + D++ A+L +DN + ++ Sbjct: 506 LDALQGCGVLKRDRETVLAEVLEFFKQREMNIFTEMKYSKDIVTAVLNTNSDNAVEALEK 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 IK L F E L KR+ I EK I+ E LY + Sbjct: 566 IKTLEAFAKEEAFETLLPVLKRVGNISKDHEK------GIINQDLFKEPVETELYNFSLE 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + +++++K Y++ + S + I +F++V+V D +V++NRLS L+++ ++ + Sbjct: 620 LNSKVIDALNNKDYNRYLQAIVSGKDIINRYFNEVMVMDKDEDVKNNRLSQLKFLADLFI 679 Query: 694 IVINVQKI 701 + ++ +I Sbjct: 680 KMADLNQI 687 >gi|94968224|ref|YP_590272.1| glycine--tRNA ligase, beta subunit [Candidatus Koribacter versatilis Ellin345] gi|94550274|gb|ABF40198.1| glycyl-tRNA synthetase beta chain [Candidatus Koribacter versatilis Ellin345] Length = 729 Score = 532 bits (1370), Expect = e-148, Method: Composition-based stats. Identities = 214/758 (28%), Positives = 343/758 (45%), Gaps = 89/758 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ-NMRQYWTPHRLFLYLKGL 59 M DFLLEI +EEIPARM A E+L+ + L++ E + ++ Y TP RL + K L Sbjct: 1 MADFLLEIGTEEIPARMIDSAREELAKRVSDLVQRERLAEGVHVESYSTPRRLAVVAKSL 60 Query: 60 SPHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+ E+ +GP + G A F + G+ + ++ KG+ A + Sbjct: 61 RTSQPDVEEQLMGPSTKVAYKDGEPTPAAHAFAKKAGVDLNAIEKV--STPKGEYIAATV 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R ++L ++P I V W KSM W ++ ++RP++ ++ +L Sbjct: 119 ARKGRSASEILSELLPKEINGVYWAKSMYW---RPGKTSERFVRPVRWMVALL-----DN 170 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ L+ + GN + GHR + + + HY L A V++D + R I Sbjct: 171 DVVPLEFDGVTAGNRSRGHRILSHGVVTLPDPSHYRDTLAAAAVVVDRKDREYKIRKALD 230 Query: 234 RLASAV-GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + G EDKDLL+ ++ L E +GSFD +YL LPEE++ ++ +QK F Sbjct: 231 AATRTITGARWREDKDLLDTVVNLTESPSALLGSFDPEYLSLPEEVLVTVMRDHQKYFAV 290 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G LA F+ V N D I GN RV+ AR DA FW DQ Sbjct: 291 EDAGGKLAPHFLAVLNTNG-DPDGLIRHGNERVLRARFNDARFFWNTDQKLD-------- 341 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-----IDAD 407 L QR+ L V F +G+ ++ R + L IA++ I Sbjct: 342 ------------LRQRVELLK--SVTFQKDLGSYYDKTCRFQKLASLIAEVAMQAGITVR 387 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQ----NENISCC----DAIEEHL 459 +V +A +LSK DL TE+V+EF ELQG +G YA Q + N D + +H Sbjct: 388 AGVVHKAALLSKTDLTTELVKEFTELQGVVGGLYAKAQGERLDCNQEVANAIGDVVYDHY 447 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 KP ++VP + V++ADK DT+ +A+ PSGSKDP+ALRRA G+++II E+ Sbjct: 448 KPVSMDDSVPRSIEGAIVAVADKADTIAGMFALGLIPSGSKDPFALRRAANGVVKIIAEH 507 Query: 520 KIDIPLSQFIED---------------------QNLILFFHDRLKLYLHD-RDIRHDLIE 557 K+ I L +D +N+ F +RL YL + + +D++ Sbjct: 508 KLPISLRTTFDDARTEYKGSEAELRFAADDKCTENIAAFMRERLDFYLREVKGFHYDVVN 567 Query: 558 AILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE----ISLE 613 A+L D+++ + + + S + KR+ IL E+K + + Sbjct: 568 AVLASNADDVVDAIARAEAVTAVRGSEDFIAVSAAFKRMKNILKQAEEKKVHPLMNLGED 627 Query: 614 ISPQYL---------LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIF 664 ++ E L D +Q ++ K Y + L+ + +P++ F Sbjct: 628 VASVRFKMEEYEKRAEHPEEAALIRAFMDVSPRVQAAVQLKSYQEAVSLVAGLRKPVDAF 687 Query: 665 FDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 FD+V+V VDD + R RL LL I + I+ + +IV Sbjct: 688 FDKVMVMVDDEQKRTARLLLLLAIVSQFEIIADFSEIV 725 >gi|312872904|ref|ZP_07732964.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2062A-h1] gi|311091426|gb|EFQ49810.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2062A-h1] Length = 689 Score = 531 bits (1369), Expect = e-148, Method: Composition-based stats. Identities = 207/731 (28%), Positives = 350/731 (47%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNG-NSDYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ ++A Sbjct: 335 -------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I+F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIISFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIDLLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL + E +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANILKKADFSEAE---QINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLL------LDKSLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|218197396|gb|EEC79823.1| hypothetical protein OsI_21278 [Oryza sativa Indica Group] Length = 1068 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 181/721 (25%), Positives = 336/721 (46%), Gaps = 68/721 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F+LEI +EE+P +A + L LI +L++ + + +R Y TP RL + ++ L+ Sbjct: 386 FVLEIGTEELPPHDVIEATKQLEKSLIQILEKRRLSHGKVRSYGTPRRLAVVVENLNMKQ 445 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E GP V G KA +GF R + D ++ K + A +++ Sbjct: 446 MEEEIELRGPPVAKAFDQEGRPTKAAEGFCRKNNVPI--DSLYRRTDGKTEYIYARVKES 503 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++VL +P I + +PKSMRW+ S + RP++ I + + I+ Sbjct: 504 ARFADEVLTEDLPTIISGISFPKSMRWN------SNIVFSRPIRWIFAL-----HGDLIV 552 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GN + G R + KV++ + Y+ LE+A +L+D + R+ IL+D+ LA Sbjct: 553 PFCFAGISSGNQSCGLRNSSLANFKVEAAELYLHTLEKAGILIDMQERKQRILHDSSILA 612 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 VG +++ L++E+I LVE +G +D +L LP++++ ++ +QK F ++ Sbjct: 613 EGVGGDIIAPDSLVQEVINLVEAPMPIIGRYDVSFLALPKDVLITVMQKHQKYFPVTSKT 672 Query: 297 -GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L CFI V+N + + +GN V+ AR EDA F+K D Sbjct: 673 MGNLLPCFITVANGAIKE--EVVRKGNEAVLRARYEDAKFFYKMDTQ------------- 717 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV---D 412 K L + +L ++FH ++GT +++ R+ ++A L+ + ++ Sbjct: 718 -------KKLSEFRDQLS--SILFHERLGTMLDKMKRVENTVAEVALLLGINEKMIPAIK 768 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A L+ +DL T IV EF L G + + YA+ + +A+ E PR + P Sbjct: 769 DAAALAMSDLATNIVTEFTSLAGIMARHYALRDGLSEQIAEALFEITLPRFSGDVFPKTD 828 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I +++ D+LD+L+ + +PS + DP+ LRR + G+++I++ENK + L++ + Sbjct: 829 PGIVLAVTDRLDSLVGLFGAGCQPSSTNDPFGLRRISYGLVQILVENKKNFDLTKALTLV 888 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++ F RL+ L D I +++ ++L + + Sbjct: 889 AEEQPITIDSGVIDEVVQFVTRRLEQLLVDEGINCEIVRSVLIERANCPYLASQTAIEME 948 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + K + + R +I+ K +LE+ + E+ L++ + I Sbjct: 949 AFSRTEDFPKIVEAYSRPTRIIR---GKEIGSALEVDASVFEKDEERALWSAYLEVADKI 1005 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +D K + + +P+E FF V V +D +VR+NRL+LL + ++ + ++ Sbjct: 1006 HPGVDIKAFADAS---LELLQPLEDFFTNVFVMAEDEKVRNNRLALLTKVASLPKGIADL 1062 Query: 699 Q 699 Sbjct: 1063 S 1063 >gi|309806591|ref|ZP_07700588.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 03V1-b] gi|308167011|gb|EFO69193.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 03V1-b] Length = 689 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 207/731 (28%), Positives = 349/731 (47%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNG-NSDYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ ++A Sbjct: 335 -------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I+F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIISFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL E +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANILKKASFSEAE---QINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLL------LDKSLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|303228981|ref|ZP_07315791.1| glycine--tRNA ligase, beta subunit [Veillonella atypica ACS-134-V-Col7a] gi|302516395|gb|EFL58327.1| glycine--tRNA ligase, beta subunit [Veillonella atypica ACS-134-V-Col7a] Length = 683 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 196/728 (26%), Positives = 332/728 (45%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL Sbjct: 1 MAKDLLFEIGAEEIPAGFMPNILGQLKTLAETKLNDAHLPFESIATYGTPRRLALIVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S E E GP G KA GF R GL + +D A Sbjct: 61 GDTSAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVAD--LVVEDG----YIYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ ++P I + +PKS+ W + ++RP++ ++ +L Sbjct: 115 TKTAGVPAKDIVTDMLPQLITGLNFPKSLHWGNLDA-----KFVRPVRWLVALL-----D 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 165 EEVIPVEFATVKSGNVTRGHRFLGADEISIKNAASYVDTLKENFVMVDQDARRELISKQL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 225 HDIAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L F+ V N + + GN RV+ ARL+DA F+ D+ Sbjct: 285 VDQDGKLLPMFLTVRNG-SDHSIEVVQAGNERVLRARLDDAKFFFNEDR----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-- 410 KPL R L +VF +G ++ R+ LG+ ++ + Sbjct: 333 ---------KKPLIDRQDGL--TKIVFQEGLGNLADKTERLLTLGRVFSEECELHEDARV 381 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 ++RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + +P Sbjct: 382 VLERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESPEVAEAIFEQYLPRYAGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L I Sbjct: 442 QTEAGKVLSIIDKIDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLRPII 501 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + F RLK DR++ H +I+ +L ++ L Sbjct: 502 VESMNLLNVPADKQDELLGQVEEFITLRLKNIFLDREVPHHVIDLLLSNNELSVADAEGL 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K L + + + R++ ++ + L EAE+ LY + + Sbjct: 562 VKALLANRIDEN-VELVQAFTRMYNLVK------DVTYTGVDESLLKEEAERALYEMATK 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ D Y + + ++ I FF+ V+V D ++ NRL L++ +++ Sbjct: 615 ASEASIDAWDKNDYDAVVAVPATLVPAINKFFEDVMVMDKDEAIKANRLQLVRLAYSVMA 674 Query: 694 IVINVQKI 701 I+ ++ + Sbjct: 675 IIGDISAL 682 >gi|302335666|ref|YP_003800873.1| glycyl-tRNA synthetase beta chain [Olsenella uli DSM 7084] gi|301319506|gb|ADK67993.1| glycyl-tRNA synthetase beta chain [Olsenella uli DSM 7084] Length = 698 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 193/735 (26%), Positives = 319/735 (43%), Gaps = 75/735 (10%) Query: 1 MP---DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M DFLLE+ EE+P+ A L+ + L + G+ + + + TP RL + + Sbjct: 1 MAETKDFLLEVGCEEMPSAPLASAQAQLARLSASALTDAGLAHGAIECHSTPRRLSVLVH 60 Query: 58 GLSPHSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 ++ + E E R GP G KA GF R GL ++ D D Sbjct: 61 DVAMATEEVHEVRRGPATGIAFDAEGRPTKAAQGFARKMGLGA-EQLVVRGDGDGKDYVF 119 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVA 168 A P R + +L I + WP +S RW + H+ ++RP++ I +L Sbjct: 120 AETSIPSRPAQPILSAAAKRLIASLEWPNYRSQRWGSEHAT-----FVRPVRWICALL-- 172 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 +++I + ++ N T GHR + + Y L A V+L+ E R + Sbjct: 173 ---GDEVIPVSFADVTSSNATRGHRVLGAGEHAIANPSAYRETLRSAGVMLEDERREAIL 229 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A G + + +L+E++ L EW + +G FD+++L +P E+I ++ +NQ+ Sbjct: 230 AGVARIEEERGGAHVDTPRRVLDEVVNLCEWPTLLVGRFDEEFLAVPHEIICESMLSNQR 289 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L F++VSN + +V GN RVV ARL+DA F+ D Sbjct: 290 YFPIYDASGALTREFVVVSNADPAVSP-TVVAGNERVVRARLDDAKFFYDED-------- 340 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LID 405 L PLD + RLD V F ++GT ++V R+ L ++A+ + Sbjct: 341 ------------LKVPLDDFVERLDR--VTFQERLGTMRQKVERMESLSAEVARGAGQGE 386 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 L RA L+KADL ++ V EF QG +G YA E AI EH +PR Sbjct: 387 EVARLARRAAHLAKADLVSQAVVEFTNQQGVMGGYYAKAAGEPAEVASAIREHYRPRFAG 446 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII-----------R 514 + +P + V++ADKLDT+ +AI+E P+GS DP+A RRA +GII R Sbjct: 447 DALPEGVVGKAVAIADKLDTICGMFAIDEPPTGSSDPFAQRRAAIGIIAMARAMPTLSLR 506 Query: 515 IILENKID------IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 ++ +D + + + LFF RL D + D IEA+ + Sbjct: 507 PLIGAALDAYARQGLAFDAGDVAEKVALFFAGRLATIARDDGVSPDTIEAVSSVGVIDPD 566 Query: 569 TIVDLIKHLNEFFSS--AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + L+ + + + R + + + + + +AE+ Sbjct: 567 EFLHRAHALDGARADAPEVFDDLATAYARAAHL------GDARLGTTVDEALM-GQAERE 619 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L ++++S+ + + L + EPI+ FFD VLV +D +R+NRL LL Sbjct: 620 LLHACERGAGNVEKSLSMRDFDGACRALAELKEPIDHFFDDVLVMDEDTVLRENRLRLLN 679 Query: 687 YIKNIILIVINVQKI 701 ++ V ++ + Sbjct: 680 KFASVFSGVADIGAL 694 >gi|315653575|ref|ZP_07906495.1| glycyl-tRNA synthetase beta subunit [Lactobacillus iners ATCC 55195] gi|315488937|gb|EFU78579.1| glycyl-tRNA synthetase beta subunit [Lactobacillus iners ATCC 55195] Length = 689 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 207/731 (28%), Positives = 349/731 (47%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNG-NSDYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ ++A Sbjct: 335 -------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL + E +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANILKKADFSEAE---QINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLL------LDKSLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|260664402|ref|ZP_05865254.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii SJ-7A-US] gi|260561467|gb|EEX27439.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii SJ-7A-US] Length = 688 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 203/732 (27%), Positives = 346/732 (47%), Gaps = 79/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + ++ + L+ LK+ G+ ++ ++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSRSVKQLADRTSKFLKDNGLEFKAIKTFSTPRRLTILVQDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E + GP G KA GF+R G+ T I + KG Y V + Sbjct: 63 KQADIDEVKKGPAKKIALDSEGNFTKAAQGFVRGQGMTTDD---IYFEDLKGTEYAYVHV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K +L D+L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 120 QKAGKLATDILLGM-SDIIKAMTFPTKMRWGSND-----FEFVRPIHWLVSLFGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + + +I G T GHRF + + + D Y L+ V+ D R+ I+N Sbjct: 170 -VVPVKILDITAGRKTMGHRFLG-DSVILANSDDYEEALKSQFVIADAAERKTMIVNQID 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +L + ++ D LLEE+ LVE+ VF GSFD+ YL +P+E++ ++K NQ+ F Sbjct: 228 QLVAENNWKVKLDASLLEEVTNLVEYPTVFAGSFDESYLNIPDEVLITSMKDNQRYFEVY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L N FI V N + ++ GN +V+ ARL+DA F+ D+ Sbjct: 288 DQDGKLINHFISVRNG-NKEFLENVISGNEKVLVARLDDAKFFYDEDK------------ 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VAL 410 PL ++RLD V FH KIG+ E++ R+R++G+ +A+ + Sbjct: 335 --------KYPLSHFVSRLD--KVSFHDKIGSMAEKLIRVRIIGEYLAKKFGLSDEVIKN 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +PT Sbjct: 385 FDRASELYKFDLVTQMVGEFAELQGVMGMHYAELAGENKDVALAIKEHYMPLTAEGELPT 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 +++ +S+ADK D +I F+A P+ S D YALRR GI+RI+L + + + Sbjct: 445 SEVGALLSVADKFDNIITFFAAGMIPTSSNDLYALRRYAYGIVRILLNENWSLAIDKALP 504 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ED+ + LF DR+K +L + ++D+I+A+L + I Sbjct: 505 KMVELLDGKTKAKMPKTSQEDEEISLFIRDRIKQFLQTNNYKYDVIDAVLHSSQKDPSRI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L S + + + S RI IL + K + + +E LY Sbjct: 565 LAAAKVLQAHHDSPEFKPVVESLIRIENILKKAKYKGDSV---VKSDLFEDNSENELYLA 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + ++ + S+ + I+ +F+ ++ D V++NRL+ L I Sbjct: 622 SQNLQ-------AIDNLTELYEAFVSMQKVIDRYFEVNMIMAKDEAVKNNRLAQLSQINE 674 Query: 691 IILIVINVQKIV 702 + + + K+V Sbjct: 675 LATRLGALSKLV 686 >gi|300868195|ref|ZP_07112827.1| Glycyl-tRNA synthetase beta subunit [Oscillatoria sp. PCC 6506] gi|300333819|emb|CBN58011.1| Glycyl-tRNA synthetase beta subunit [Oscillatoria sp. PCC 6506] Length = 739 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 204/768 (26%), Positives = 340/768 (44%), Gaps = 97/768 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA +A ++ + E+ + + + Y TP RL + ++GL Sbjct: 1 MATFLLEVGTEELPATFVKEAIAQWQRLIPAAIAEQSLTNEAINVYGTPRRLAVVIEGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP G KA +GF + G++ S + KGD + + Sbjct: 61 TQQSDREEEIKGPPAATAFKDGKPTKAAEGFAKKQGVEIDSLEI--RPTDKGDFIFILKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R D+L ++P I K+ + MRW + RP++ ++ +L Sbjct: 119 IPGRPTADILAELIPQWISKLEGKRLMRWGDGE-----LKFPRPIRWLVALLDDAILPIT 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + + I+ GHR P P+ + ++Y+ L A + +DPE R+ I Sbjct: 174 LVNGS-ETVNSDRISQGHRVLHPQPVAISKAENYLESLRSAYIEVDPEKRQTKIREQVEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A G + +LLEE+ LVEW +G FD+++L LP E I I NQ+ F Sbjct: 233 AAKKQGGKADITTELLEEVTNLVEWPTAVVGKFDEEFLILPPEAITTIIVKNQRYFPILK 292 Query: 295 RE--GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 E L FI +SN + I GN RVV ARL D F+K D Sbjct: 293 SEASSELLPYFITISNGDPA-KSDVIATGNGRVVRARLADGDFFYKAD------------ 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 L+KPL+ + +L+ V F +GT ++++R + IA + + + Sbjct: 340 --------LAKPLESYLPQLE--KVTFQENLGTVRDKINRFSKIANLIADQLQVTEEERN 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA +L KADL T++V EFPELQG +G++YA+ E AI EH PRG + +P Sbjct: 390 NIQRAALLCKADLVTQMVYEFPELQGIMGQKYALASGEAEPVATAIFEHYLPRGAGDILP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + V+LADKLDTL++ +++ KP+GS DP+ALRR+ +I I ++ + L + Sbjct: 450 QSLTGQVVALADKLDTLVSIFSLGMKPTGSSDPFALRRSANAVINITWAAQLPLDLYELI 509 Query: 529 ----------------------------------------IEDQNLILFFHDRLK-LYLH 547 Q+L FF R++ L Sbjct: 510 VKVVEFTQLESLTKTGKLAPPDSQSDEYHSFMQRIRTLYVCLKQDLSDFFLQRIRTLLQE 569 Query: 548 DRDIRHDLIEAILRPEN--------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 ++ I +DL+ A+L + +LL ++ L + + +K + R ++ Sbjct: 570 EKGIDYDLVNAVLGENDPEYTERALQDLLDALERAVFLQQIRDNGTLDKIYETVNRSTRL 629 Query: 600 LAIE--EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 +K E + P+ +E+ I Q S + + Y Q+ + L I Sbjct: 630 AGQGDLDKMQLEPKTLVRPELFQKSSEQAFNDAIVQLVPKTQASKESRNYQQLVESLAEI 689 Query: 658 CEPIEIFFD---QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + FFD VLV + E++ NRL+LL ++N ++ + +IV Sbjct: 690 APAVSNFFDGSESVLVMDSNPEIKQNRLNLLGLLRNHARVLADFGQIV 737 >gi|225850124|ref|YP_002730358.1| glycyl-tRNA synthetase, beta subunit [Persephonella marina EX-H1] gi|254781858|sp|C0QUJ3|SYGB_PERMH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225644860|gb|ACO03046.1| glycyl-tRNA synthetase, beta subunit [Persephonella marina EX-H1] Length = 705 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 201/746 (26%), Positives = 344/746 (46%), Gaps = 88/746 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY---QNMRQYWTPHRLFLYLK 57 M +LLEI EE+P + A L L E Y +N+ + TP R+ L Sbjct: 1 MKKYLLEIGCEELPPKAVDTAISYFKERL-EGLFENFFEYRTEENISVFGTPRRIGFILS 59 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 L P + + LGP G KA F + I+ + KG Sbjct: 60 NLREKEPSEEKTILGPPAKVGIDEKGNFTKAALAFASKNNIPVEQLKIIENE--KGRYIG 117 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 A L K + I ++ ++P I K+P+PK MRW+ + F + RP++ I+ +L Sbjct: 118 ATLIKEGKDIRTFIQEVIPDLITKIPFPKLMRWNE-----TGFRFSRPVRWIVSLL---- 168 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAP-----HPIKVQSLDHYIRDLEEAMVLLDPECRR 225 +++ + I T+ HRF K+ +D Y + ++ ++ E R+ Sbjct: 169 -DNEVVSFSIAGIDADRYTHLHRFMTTPTGRGERKKIPDVDSYFQIMKLGFIIPKYEERK 227 Query: 226 NAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 A+ A+++ E V D+DLL+E+ L E+ +G F +YL LP+E+I K Sbjct: 228 EAVKTQLTGFANSINAEPVIDEDLLDEVTNLTEFPVGILGDFSPEYLILPKEVIITVCKV 287 Query: 286 NQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 +Q+ F ++G L F+ SN D + G +V+ ARLEDAL F++ D Sbjct: 288 HQRYF-NFEKDGKLIPKFLAFSNTAVKDR-EKVKSGYEKVLKARLEDALFFYEED----- 340 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 L L+ +L+ + FH K+G+ ++V R + +++ ++ Sbjct: 341 ---------------LKHNLEDFYPQLE--GIQFHHKLGSMLDKVKRNGEIAVLLSRELN 383 Query: 406 -ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 ++ + RA LSK DL TE+V+EF ELQG +G YA+ Q E AI EH P+ Sbjct: 384 FENLKDLLRANKLSKCDLLTEMVKEFDELQGIMGMHYALKQGEKEEVAKAIYEHYLPKTS 443 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P I +SL+DKLDT+I+F +I EKP + DP+ +RR ++GI+RI++E ID+ Sbjct: 444 DDQLPETDIGTLLSLSDKLDTVISFISIGEKPKATADPFGIRRNSIGIVRILVEKGIDLD 503 Query: 525 LSQFIED-----------------------------QNLILFFHDRLKLYLHDRDIRHDL 555 L + ++D ++ F R Y+ D+ D+ Sbjct: 504 LKKLLQDISREARKVKILRLADIEKEWEIIFDERTIPEILDFIEGRFIAYMKDKGFDTDI 563 Query: 556 IEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS 615 I +++ ++ NL IK + E + + + KR+ +I+ E + Sbjct: 564 INSVVSVDSYNLYRNYLKIKSIQELKKNPEFTDIMTVFKRVGRIIP------EEFEEHFN 617 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 P L+ + EK LY ++ + ++ +RY + + L + I+ FFD V+V +D+ Sbjct: 618 PDTLVQDEEKELYRKYTEVNKIFSKDVEDRRYTEALNELLKMKPFIDKFFDNVMVMTEDK 677 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKI 701 ++R+NRLSL++ I N+ + + KI Sbjct: 678 KLRENRLSLMKLINNMFRKIADFTKI 703 >gi|289434740|ref|YP_003464612.1| glycyl-tRNA synthetase, beta subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170984|emb|CBH27526.1| glycyl-tRNA synthetase, beta subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 688 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 197/731 (26%), Positives = 339/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + E L + L+E + + ++ + +P RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVEQLKKRMRDWLEENQIAFAEIKTFSSPRRLTVLVEDM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S ++ ++ K + Sbjct: 61 AEEQANRVEEAKGPAKKIALDEEGNWSKAALGFAKSQKIEPAD--LTFREIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + +P SM W +IRP+K ++ + E Sbjct: 119 KEVIGEKTTALLPA-LQKVVTSMTFPVSMHWGNND-----LRYIRPIKWLIAMFGQE--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 II ++ + N + GHRF ++ Y L E V++D R+ AI Sbjct: 170 --IIPFEITGVTTSNTSRGHRFLG-KTTTIKQPSDYQNALLEQFVVVDATERKEAISGQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LAS ++ ED DLLEE+ LVE+ V G+F+++YL LPEE++ T+K +Q+ F Sbjct: 227 KELASLENWQIKEDADLLEEVTNLVEYPTVLAGNFEEEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +++G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQDGKLLPHFVTVRNG-NHENIETVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L + + +A+L ++VFH K+GT E++ R++ + IA +D AD Sbjct: 334 --------LKMTIAEAVAKL--PNIVFHEKLGTLTEKMKRVQKVALMIADYLDWKEADKE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T +V EFPELQG +G++YA+LQ E + AI EH P+ +P Sbjct: 384 DIIRLTDIYKFDLVTNVVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPKSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+T + F+ +N P+GS DP+ LRR+ G +RII N DIP+ + + Sbjct: 444 QTDLGSLIAIADKLETFVGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPVLELL 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L + IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGAVELPSDDVKREVQTFLKNRLRVVLQNHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 VD + LN+ S + + R+ I E+ +E+ P E E L+ Sbjct: 564 VDRAQILNKHVESEWFRPTVEALTRVLNISKKYEEG-----VEVDPALFENEYEHALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKYDYASLTILER----LKAFAGLRTTIDDYFDNTLVMSDNLELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|253581996|ref|ZP_04859220.1| glycyl-tRNA synthetase subunit beta [Fusobacterium varium ATCC 27725] gi|251836345|gb|EES64882.1| glycyl-tRNA synthetase subunit beta [Fusobacterium varium ATCC 27725] Length = 690 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 186/728 (25%), Positives = 343/728 (47%), Gaps = 73/728 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EE+PAR ++A +DL L LK+E + ++ ++ Y TP RL L + L Sbjct: 3 LLFEIGMEELPARFLNQALKDLKNNLETKLKDERISFKGIKTYGTPRRLVLEVCELGEQQ 62 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + +GP G +A GF +S G++ I KG+ A Sbjct: 63 EDLNIVNMGPAKNIAYGSNGEISRAGLGFAKSQGIEAEDLEII--STPKGEYIAARKFMK 120 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +++L I+ + ++ + KSM WS + RP++ L + +++ Sbjct: 121 GKETKELLPEILKSLVLELNFQKSMTWSDKK-----LRFARPIQWFLALC-----DNEVV 170 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 +++ + GN + GHRF +V ++D Y + E V++D E R+ I + Sbjct: 171 KFEIEGMESGNKSRGHRFFG-KEFEVNTIDEYFEKIRENNVIIDIEERKALIKKLINENC 229 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + G +++ + +LL E+ L+E+ +GSF+ +L +P+E++ ++++ +Q+ F Sbjct: 230 TNSGEQVLVEDELLAEVTNLIEYPCPIVGSFNSDFLEVPQEVLIISMEVHQRYFPILDSN 289 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L F++V N + + +GN +V++ARL DA F++ D Sbjct: 290 GKLLPKFVVVRNGV--ETSEQVRKGNEKVLSARLADARFFYQED---------------- 331 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PL + +L VVF +GT ++ R + K + + + + R Sbjct: 332 ----LKSPLADNVEKLKT--VVFQKDLGTIYSKIERATEIAKYLIDTLGYNDRKDSILRT 385 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ +EF +LQG +G +YA+ E I+EH PR +N+PT Sbjct: 386 VFLAKADLVSNMIGEKEFTKLQGFMGADYALKSGEGEKVSLGIKEHYYPRFQGDNLPTEL 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I ++D++DTL+ + + PSGSKDP+ALRRA LGI+ +IL ++++I L E Sbjct: 446 EGIVAGISDRIDTLVGCFGVGVIPSGSKDPFALRRAALGIVNVILNSQLNISLKALTEKA 505 Query: 533 -------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ++ FF R + D++ A+L ++DN + ++ Sbjct: 506 LDALQGCGVLKRDRETVLAEVLEFFKQREMNIFTEMKFGKDIVTAVLNTDSDNAVEALEK 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 IK L F + E L KR+ I EK I+ E LY + Sbjct: 566 IKTLETFAKEEEFETLLPVLKRVGNISKDHEK------GIINQDLFKEPVETELYNFSLE 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + +++++K Y + + S + I +FD+V+V D +V++NRLS L+++ ++ + Sbjct: 620 LNSKVIDALNNKNYDKYLQAIVSGKDIINKYFDEVMVMDKDEDVKNNRLSQLKFLADLFI 679 Query: 694 IVINVQKI 701 + ++ +I Sbjct: 680 KMADLNQI 687 >gi|188585834|ref|YP_001917379.1| glycyl-tRNA synthetase, beta subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|229558564|sp|B2A1Y6|SYGB_NATTJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|179350521|gb|ACB84791.1| glycyl-tRNA synthetase, beta subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 693 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 193/732 (26%), Positives = 336/732 (45%), Gaps = 72/732 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L E+ +EE+PAR + L LL E + Y+N++ TP RL L + GL Sbjct: 1 MHNTLLFELGTEELPARFIPGLIKQLEENSANLLTEYRIEYENIKVMATPRRLTLLVNGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + GP G KA GF R + D +I++D K + AV Sbjct: 61 ADKQQSSTTMKRGPAKEIAFDENGEPTKAAIGFARGQNIDP-KDLEIREDNGK-EYVYAV 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +DVL ++ I K P M W+ ++RP++ ++C+ Sbjct: 119 AEIVGENCQDVLPKLLDELITKFNLPVKMFWNNKQD-----KFLRPVRWLVCLF-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ L+ + NI+ GHRF + + + S ++Y + ++ V++D R I Sbjct: 169 DQVLPLNFGTVEASNISRGHRFLSQGDVIINSAENYEEVMRDSWVMVDHNVREETIKAQI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA + DLLEE+ LVEW +G+F +++L +P+E + +++ +QK F Sbjct: 229 EELADQMNASPEMPHDLLEEVNFLVEWPTALLGNFAEEFLEIPKEALITSMQEHQKYFAL 288 Query: 293 RTREG--VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +E L F+ V N G + GN RV+ ARL DA F++ D Sbjct: 289 VDKEDSSKLLPYFVAVRNGD-DHGIDKVKAGNERVLRARLSDARFFFEEDT--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA- 409 L+ + +L +++ ++G+ ++V+R+ LGK + +++ Sbjct: 339 -----------KTSLESKREQLK--SIIYKEQLGSVDQKVTRMEELGKTLLDILELSEPV 385 Query: 410 --LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 L RAI LSKADL T +V EFP LQG +G++YA + E+ C I EH PR + Sbjct: 386 RSLTLRAIALSKADLPTNMVSEFPHLQGIMGEKYARIHGEDEKVCLGISEHYLPRHTGDK 445 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + S+ DK+D + + +AI E+PSGS+DPYALRR LGI+ IILE ++ L Q Sbjct: 446 LPQTMVGTITSIVDKVDNIASSFAIGERPSGSQDPYALRRQALGIVHIILETELAFSLEQ 505 Query: 528 FIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 +++ F R + +++ + D+I++ L + N+ Sbjct: 506 LFHRALSLIPESALVAPISNILDDILDFVKLRSRTIFNEQGLPIDIIDSTLEVDKANVYK 565 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 K L ++ S + E + R+ + + ++ + + L E EK LY Sbjct: 566 AYLRAKVLKDYRDSQELEDVRTAYTRVKNLANKAKGED------VYTELLQDETEKMLYH 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + ++ L + I+ FFD+V+V VDD+ +++NRL+L+ +IK Sbjct: 620 KYLNTEDKLLSDLEQDEISSAISELAGFKDYIDQFFDEVMVMVDDKHLQNNRLNLIYHIK 679 Query: 690 NIILIVINVQKI 701 + + + I Sbjct: 680 EMYRQLADFSII 691 >gi|269798037|ref|YP_003311937.1| glycyl-tRNA synthetase subunit beta [Veillonella parvula DSM 2008] gi|269094666|gb|ACZ24657.1| glycyl-tRNA synthetase, beta subunit [Veillonella parvula DSM 2008] Length = 683 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 198/728 (27%), Positives = 332/728 (45%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL Sbjct: 1 MAKDLLFEIGAEEIPAGFMPNILGQLKQLAETKLNDAHLPFESIATYGTPRRLALIVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + S E E GP G KA GF R GL + +D A Sbjct: 61 ADTSAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVAD--LVVEDG----YIYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ ++P I + +PKSM W + ++RP++ ++ +L Sbjct: 115 TKTAGVPAKDIVTEMLPQLITGLNFPKSMHWGNLDA-----KFVRPVRWLVALL-----D 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E +I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 165 EDVIPVEFATVQSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 225 HDMAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L F+ V N + + GN RV+ ARL+DA F+ D+ Sbjct: 285 VDQDGKLLPMFLTVRNG-SDHSIEVVQAGNERVLRARLDDAKFFFNEDR----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 KPL R L +VF +G ++ R+ LG+ + V Sbjct: 333 ---------KKPLIDRQDGL--TKIVFQEGLGNLADKTERLLKLGRVFGEECGLHEDTVV 381 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + +P Sbjct: 382 VLERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESPEVAEAIFEQYLPRFAGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L Sbjct: 442 QTEAGKVLSIIDKVDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLRPIF 501 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + FF RLK DR++ H +I+ +L ++ L Sbjct: 502 KASMELLNVPAEKQEELLGQVEEFFTLRLKNIFLDREVPHHVIDLLLSNNELSVADAEGL 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L + + + R++ ++ K+ E + ++ L +AEK L+ S Sbjct: 562 VNALLANRIDEN-VELVQAYTRMYNLV-----KDVEYTG-VNSDLLKEDAEKELFEAASK 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + Y + + ++ I FF+ V+V D ++ NRL L++ +++ Sbjct: 615 ASEASSAAWEAGDYDAVVAVPATLVPAINKFFEDVMVMDKDEAIKANRLQLVRLAYSVMA 674 Query: 694 IVINVQKI 701 I+ ++ + Sbjct: 675 IIGDISSL 682 >gi|259500589|ref|ZP_05743491.1| glycyl-tRNA synthetase [Lactobacillus iners DSM 13335] gi|302191280|ref|ZP_07267534.1| glycyl-tRNA synthetase subunit beta [Lactobacillus iners AB-1] gi|259167973|gb|EEW52468.1| glycyl-tRNA synthetase [Lactobacillus iners DSM 13335] Length = 689 Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats. Identities = 208/731 (28%), Positives = 349/731 (47%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGNFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW +IRP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFIRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNG-NSDYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ ++A Sbjct: 335 -------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL + E +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANILKKADFSEAE---QINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLL------LDKSLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|229815346|ref|ZP_04445681.1| hypothetical protein COLINT_02392 [Collinsella intestinalis DSM 13280] gi|229809126|gb|EEP44893.1| hypothetical protein COLINT_02392 [Collinsella intestinalis DSM 13280] Length = 696 Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats. Identities = 192/736 (26%), Positives = 321/736 (43%), Gaps = 80/736 (10%) Query: 1 MP---DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M DFL E+ EE+P+ + A + L ++ L E G+ + +R +P RL + + Sbjct: 1 MANTRDFLFELGVEEMPSAPLNNAVKQLESLMGKGLDEAGLAHGAIRVISSPRRLAVLVS 60 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 ++ + E GP G KA +GF R GL + ++D + Sbjct: 61 DVAEATEEIHSVLRGPSAKIAFDAEGNPTKAAEGFARKNGLTARELVR-REDADGTEYVF 119 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVA 168 A P +L + I + WP +S RW + H+ ++RP++ I C+ Sbjct: 120 AEQNTPSEPALPILTRVCEGLIPSIQWPNYRSQRWGSEHAT-----FVRPVRWICCLF-- 172 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E+++ + ++ GN T GHR +P V S D Y LE A V L E R I Sbjct: 173 ---GEEVVPVSFADVVSGNTTRGHRVLSPGEHLVASTDAYEDVLESAHV-LSAERREQVI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 ++ S +G+ + + +E++ L EW V +G FD+++L +P E+I ++ +NQ+ Sbjct: 229 REGIAKVESELGVRVDTPAKVFDEVVNLCEWPTVLVGHFDEEFLNVPSEIICESMLSNQR 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F T EG L F++VSN A ++ GN RVV ARL DA F+ D Sbjct: 289 YFPTYDAEGNLTRAFVVVSNGDPK-ANATVIDGNERVVRARLYDAKFFYDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L L+ RL V F K+GT ++ R+ L IA+ Sbjct: 340 ------------LKVDLEVFRERL--ASVGFQQKLGTVLQKSDRMEDLALAIAREAHLGA 385 Query: 409 ALV---DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 RA L+KADL + V EF QG +G YA E AI +H +PR Sbjct: 386 HAASSAQRAAHLAKADLVSSAVVEFTSQQGVMGGYYATAAGEEPEVAAAIRDHYRPRFAG 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--------- 516 +++P V++ADKLDT+ +AI+E P+GSKDP+ALRR+ +G++ I+ Sbjct: 446 DDLPEGIAGCIVAVADKLDTIAGMFAIDEPPTGSKDPFALRRSAIGVLNILRTRLKCGYE 505 Query: 517 ----------LENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 LE ++ + ++ F R+ D + D + A+ + Sbjct: 506 AIVDAALEGYLEQGLEFD--KAAVAASVCAFIKGRMAQMARDEKVSADTVAAVSDGDVTV 563 Query: 567 LLTIVDLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 + +L L E ++ + + R + + E+ +E + +AE Sbjct: 564 PVHFFELAHALEEARANDREAFTNLATAYARAAHLA------DAELGIEADRNLM-GDAE 616 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L + ++D + + + L ++ PI+ FFD V+V +D VR+NRL L Sbjct: 617 LALLYATDAARDEVASALDARDFKAVIAALAALRGPIDAFFDDVMVMDEDMAVRENRLRL 676 Query: 685 LQYIKNIILIVINVQK 700 L +++ + N+ + Sbjct: 677 LNRFEDVFAGIANIGE 692 >gi|310778466|ref|YP_003966799.1| glycyl-tRNA synthetase beta chain [Ilyobacter polytropus DSM 2926] gi|309747789|gb|ADO82451.1| glycyl-tRNA synthetase beta chain [Ilyobacter polytropus DSM 2926] Length = 690 Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats. Identities = 191/727 (26%), Positives = 342/727 (47%), Gaps = 73/727 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLEI EEIPAR A D+ + + + + ++ ++ + TP RL L + G+S Sbjct: 4 LLEIGMEEIPARFLKPALNDIEKYIKKEFESQRIKFETLKTFGTPRRLVLLVDGVSEKQE 63 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + GP G +A GF +S G+ ++ KG+ Sbjct: 64 DLDIVNTGPAKEVAYDVNGELTRAGVGFAKSQGIDPTDLEILE--TPKGEYIAVRKFVEG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +++L ++ I + +PKSM+WS + + RP++ L + A +++++ Sbjct: 122 KDTKELLSGLLKNLITGLTFPKSMKWSDL-----SMKFARPVQWFLAM-----ADDELVE 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ I + GHRF +V S++ Y L E V++D E R+ I++ + Sbjct: 172 FEIEGIKSSLNSKGHRFFG-EEFEVTSIEEYFTKLRENNVIVDIEERKQMIIDMIKEKCT 230 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G +++ + DLL+E+ L+E+ +G+F+ ++L +P+E++ ++++ +Q+ F +G Sbjct: 231 KTGEQVLIEPDLLDEVTNLIEYPYPIVGTFNSEFLEVPQEVLIISMQVHQRYFPILDSQG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L F+++ N S + +GN +V++ARL DA F++ DQ Sbjct: 291 KLLPKFVVIRNGITS--SEHVRKGNEKVLSARLSDARFFYQEDQ---------------- 332 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVALVDRAI 415 K L++ + +L VVF +GT +++SR + L + +++ + + R I Sbjct: 333 ----KKSLEEFVDKLST--VVFQKDLGTIAQKISRSKKLAEYMSEKLALRDSKEDIMRTI 386 Query: 416 VLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L+KADL + ++ +EF +LQG +G +YA+ E IEEH PR + +P Sbjct: 387 HLAKADLVSNMIGEKEFTKLQGFMGADYALKAGEKEVVSKGIEEHYYPRYQGDKLPQGIE 446 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 + + D++DTL+ + I PSGSKDP+ALRRA L I+ IIL +K+ I L + Sbjct: 447 GVIAGICDRMDTLVGCFGIGMIPSGSKDPFALRRAALAIVNIILNSKLVISLEELTSKML 506 Query: 533 ------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +L+ FF R D R D+I A+L + D LL + I Sbjct: 507 DILEEDNVLKRPKKDVLKDLMEFFKQRAINVFADHGHRKDVIGAVLSIDCDVLLEASEKI 566 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L + +L KR+ I +K IS L+ +AEK L+ D Sbjct: 567 ETLEKVSKEEGFNDLVLLLKRVGNISKDHHEK------AISTDLLVEDAEKELHKFYVDL 620 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++ K Y + + + I FFD V+V D+ +++NRLSLL+ + I Sbjct: 621 DSKTELNLQTKSYEEFFRNILAGKNVINRFFDSVMVMDKDQSLKNNRLSLLKSLNEIFNR 680 Query: 695 VINVQKI 701 V + I Sbjct: 681 VAKLNLI 687 >gi|325695192|gb|EGD37093.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK150] Length = 679 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 210/725 (28%), Positives = 343/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDSDGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEVGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIVSADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENSAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEKVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TPDLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|239817704|ref|YP_002946614.1| glycyl-tRNA synthetase, subunit beta [Variovorax paradoxus S110] gi|239804281|gb|ACS21348.1| glycyl-tRNA synthetase, beta subunit [Variovorax paradoxus S110] Length = 712 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 210/737 (28%), Positives = 345/737 (46%), Gaps = 69/737 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K + + +L L +G+ + Y +P RL +L + Sbjct: 6 KNLLVELFVEELPPKALKKLGDAFAGVLRDQLVAQGLAEPASVLTAYASPRRLAAHLTHV 65 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLA 111 + + +K + ++L P G A+ L + G + +K+ K + Sbjct: 66 AERAADKAVSQKLMPVAVGLDASGQPTPALLKRLAALGADASAVPGLKRAMDGKAEALFY 125 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS----PISAFSWIRPLKSILCILV 167 + + L+ + AI K+P PK M + S+ S++RP ++ + Sbjct: 126 ESTAKGATLAEGLQKALAEAIAKLPIPKVMSYQLESGCELPGWSSVSFVRPAHGLVAL-- 183 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRR 225 + ++ ++ + G T+GHRF A P+ ++ + Y +++ V+ E RR Sbjct: 184 ---HGDAVVPVEALGLQAGRETHGHRFEAAVDPVVLRDANSYALQMQDEGAVIASFEARR 240 Query: 226 NAILNDAHRLASAVGLE--LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 I A VG + D LL+E+ LVE V + SF++++L +P+E + LT+ Sbjct: 241 TEIARQLAAAAVRVGGAAVPIHDDALLDEVTALVERPNVLVCSFEREFLEVPQECLILTM 300 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 K NQK F L N F++VSNI D +A+V GN RVV RL DA F+ +D+ Sbjct: 301 KANQKYFPLLDASNRLTNKFLVVSNISPEDA-SAVVGGNERVVRPRLADAKFFFDQDR-- 357 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 K L R+ L VV+H K+GTQGERV R+ + + IA+ Sbjct: 358 ------------------KKSLASRVESLG--KVVYHNKLGTQGERVERVMRIARGIAEK 397 Query: 404 ID--ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + A VA +A L+KADL T++V EFPELQG +G+ YA+ DAIE+H KP Sbjct: 398 LGGAALVAHAVQAAQLAKADLVTDMVGEFPELQGTMGRYYALHDGLAAEVADAIEDHYKP 457 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P N + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E + Sbjct: 458 RFAGDELPRNSVGLVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLIEKDL 517 Query: 522 DIPLSQF-----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + L L F DRL L ++ ++A+L P Sbjct: 518 PLKLDALLQDAAAQFKDIDGFDTGKATAELQDFILDRLAGSLREQGASAQEVDAVLAPRP 577 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 L + L+ + F + + KRI IL KK E +S L AE Sbjct: 578 QRLGEVPKLLAAVRAFAALPAAAALAAANKRIGNIL----KKAPEADAHVSELLLKEPAE 633 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K L+A +++ D Y L ++ EP++ FFD V+VN + ++R NRL L Sbjct: 634 KALHAAMAEVVPAANAQFDAGDYTASLQTLAALREPVDAFFDGVMVNAEQADLRLNRLGL 693 Query: 685 LQYIKNIILIVINVQKI 701 L + + V ++++ Sbjct: 694 LMSLHAAMNRVAQLERL 710 >gi|260460347|ref|ZP_05808599.1| glycyl-tRNA synthetase, beta subunit [Mesorhizobium opportunistum WSM2075] gi|259033992|gb|EEW35251.1| glycyl-tRNA synthetase, beta subunit [Mesorhizobium opportunistum WSM2075] Length = 792 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 296/649 (45%), Positives = 401/649 (61%), Gaps = 32/649 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL +L L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKMLTDGLVEAGLTYEAAREYWTPRRLTLDVRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++A+ GFLR GL +I++ + DPKKGD Y+A + KP R Sbjct: 61 ARSKDISEEIKGPSTTAPEQAVQGFLRKAGLSSIAEAHVHSDPKKGDFYVAHISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ +VP I+ PWPKSMRW + + W+RPL+SILC E + ++D ++ Sbjct: 121 EQIIAELVPGIIRNFPWPKSMRWGPASAKPGSLRWVRPLQSILCTFGPETEEPVVVDFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N+TYGHRF AP I V+ D Y+ LE A V+LD + R+ IL DA LA A G Sbjct: 181 DGIRSCNVTYGHRFLAPGEITVRRFDDYVSKLEAAKVVLDADRRKEIILADARNLAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV-- 298 L+LVED+ LLEE+ GLVEW V MG F++ +L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 LDLVEDEGLLEEVSGLVEWPVVLMGEFEEAFLAIPAEVIRLTIRANQKCFVTRPQGEGET 300 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N FIL +NI+A+DGG I GN +VV ARL DAL+FW DQ +LP+L L+ SA KF Sbjct: 301 LSNRFILTANIEATDGGKEIAHGNGKVVRARLSDALYFWTTDQGDLPDLGQLEASAEKFG 360 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 LDL KPLDQRMARLD LDV FHAK+GTQGER RI+ L +++A ++ AD AL RA +L+ Sbjct: 361 LDLKKPLDQRMARLDHLDVTFHAKLGTQGERAERIKRLAEQLAPIVGADPALASRAAILA 420 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G++YA+LQ E+ S AIEEH KP+GP + VP++ +S+TV+ Sbjct: 421 KADLTTEVVGEFPELQGAMGRKYALLQGEHPSVAAAIEEHYKPQGPSDYVPSDPVSVTVA 480 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF 538 LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG++R+ILENK+ + L I Sbjct: 481 LADKLDTLVGFWAIDEKPTGSKDPYALRRAALGMVRVILENKLKLSLGIAIAAAVSSA-- 538 Query: 539 HDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 L ++++ ++ + ++ + L+E I Sbjct: 539 -----LAVYEQKGEGTESRGVVAMLDSSIRDYKGASQLLSE-------AGL------ISN 580 Query: 599 ILAIE-EKKNREISLEISPQYLLLEAEKRLY--AVISDFGTHIQESMDH 644 +L K + E E+ + + + + + Sbjct: 581 LLKGGLAKASSETFGSAD-------QEREFFDGQRLMELEASLSPLIAD 622 Score = 217 bits (552), Expect = 6e-54, Method: Composition-based stats. Identities = 66/182 (36%), Positives = 104/182 (57%), Gaps = 2/182 (1%) Query: 520 KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ LS I +L+ FFHDRLK+YL D+ RHDLI+A++ P +D+LL IV ++ L Sbjct: 611 ELEASLSPLIA--DLLSFFHDRLKVYLRDQGARHDLIDAVITPRSDDLLQIVRRVEALGS 668 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + G+ L KR ILA EEKK I+ + P +AE L+A ++ Sbjct: 669 FLDTEDGKNLLAGTKRAANILAAEEKKKTAIAQTVEPALFRQDAENSLFAAVNQAEKQAG 728 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 E++ ++ + L ++ EP++ FF+ VLVN ++ VR NRL+LL I++ V + Sbjct: 729 EAIQNEDFSAAMLALSALREPVDSFFEHVLVNDENLAVRANRLALLARIRSATGQVADFS 788 Query: 700 KI 701 KI Sbjct: 789 KI 790 >gi|81298829|ref|YP_399037.1| glycyl-tRNA synthetase subunit beta [Synechococcus elongatus PCC 7942] gi|81167710|gb|ABB56050.1| glycyl-tRNA synthetase, beta subunit [Synechococcus elongatus PCC 7942] Length = 728 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 195/760 (25%), Positives = 337/760 (44%), Gaps = 93/760 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A L L E + + Y TP RL + ++GL Sbjct: 1 MPAFLLEVGTEELPASFVAAAIAQWQNWLPTRLAEAQLTTTQISVYGTPRRLAVLIEGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G A GF R G++ ++ KG R Sbjct: 61 DRQPDREEEVKGPPASAAFKDGEPTPAAIGFARKQGVEVSD--FTVRETDKGAFVFVQKR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + + DVL+++VP IQ + + MRW + RP++ ++ + ++ Sbjct: 119 EVGQPLADVLQSLVPSWIQDLEGKRFMRWGDGD-----LRFSRPIRWLVAL-----IDDQ 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+L + ++ GHR P P+ + Y+ LE A VL+DP R+ I Sbjct: 169 VLPLELTSGGSTVQSDRLSRGHRVLHPEPVAIAQASDYLATLEAASVLVDPAQRQAKIEA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +AS VG + +DLL E++ L EW +G F++++L LP E+ + + ++Q+ F Sbjct: 229 QTAAIASKVGGQAELPEDLLAEVVHLTEWPTAVLGQFEERFLSLPAEVSTMVMTSHQRYF 288 Query: 291 VTRTRE-----------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 L CF+ +SN + I GN+RV+ ARL D +F++ Sbjct: 289 PIYQATAQRDPAAIDARSELLPCFVTISNGDPA-ASETIAAGNARVIRARLADGEYFYRT 347 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D +PL+ +++L+ V F ++G+ +V RI + + Sbjct: 348 DS--------------------KQPLESFLSQLE--AVTFQEQLGSVRSKVDRIGAIAHR 385 Query: 400 IAQLIDA---DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 + + D LV RA L KADL +++V EFPELQG +G++YA + E + AI Sbjct: 386 LCDQLSIHSSDRLLVSRAAQLCKADLVSQMVYEFPELQGVMGEKYARVSQEPDAVATAIR 445 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 EH P+G + +P V+LAD+LDTL+ + + PSGS DP+ALRRA G++ I+ Sbjct: 446 EHYLPKGAGDQLPQTLTGRMVALADRLDTLVCIFGLGLLPSGSSDPFALRRAANGVLNIL 505 Query: 517 LENKIDIPLSQFIE--------------------DQNLILFFHDRLKLYLHD-RDIRHDL 555 + ++ + L+ I+ Q L FF RL+ L D + I +DL Sbjct: 506 WDGQLRLDLTALIQGIAADFHHAFPKLAGNAETLIQQLTDFFGQRLRTLLQDEQGIDYDL 565 Query: 556 IEAILRPE--------NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EK 605 + A+L + L ++ K L + + R ++ + + Sbjct: 566 VNAVLGDGDANYLLRAIADPLDALNRAKLLQTLRQDGRLVALYETVNRATRLASKGDLDT 625 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 + + ++ +E + ++ + + Y + + L + ++ FF Sbjct: 626 ATLDPTGLVNADLFQQPSEAAFLSALTTLQPLATAAQASQAYEPLVEGLLTAAPAVQSFF 685 Query: 666 D---QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 D VLV D ++ NRL+LL ++N ++ + IV Sbjct: 686 DGDTSVLVMDPDPAIQQNRLNLLGLLRNQARVLADFGAIV 725 >gi|309805181|ref|ZP_07699233.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 09V1-c] gi|308165415|gb|EFO67646.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 09V1-c] Length = 689 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 207/731 (28%), Positives = 349/731 (47%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNDWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNG-NSDYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ ++A Sbjct: 335 -------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGEKINISSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL + E +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANILKKADFSEAE---QINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLL------LDKSLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|294338462|emb|CAZ86788.1| glycine tRNA synthetase, beta subunit glyS [Thiomonas sp. 3As] Length = 721 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 204/730 (27%), Positives = 358/730 (49%), Gaps = 62/730 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYL-KGL 59 + L+E++ EE+P + E + L L+ +G+ +++ Y +P RL + + Sbjct: 21 NLLVELFVEELPPKALPALGESFARTLAASLQSQGLAASDVKPTPYASPRRLAVRIPAVA 80 Query: 60 SPHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAV 112 + + + + ++L P G A+ L + GL + +++++ K + Sbjct: 81 AKAADKAVAQKLMPVAVGLDADGKPTPALLKKLGALGLDADAAPRLRREGEGKAETLFID 140 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + + L+ + AI K+P PK M + + ++RP ++ + A+ Sbjct: 141 TVAPGATLAEGLQKALAEAIAKLPIPKVMAYQLEDG-WTTVKFVRPAHGLVALHGAD--- 196 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 ++ + + G T+GHRF A PI ++ D Y L E V+ + RR I Sbjct: 197 --VVPVQALGLTAGRETHGHRFEAQADPIVLRDADSYADQLREQGAVIASFDARRAEIAA 254 Query: 231 DAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A G L ++D LL+E+ LVE V + FD +L +P+E + LT+K NQK Sbjct: 255 QLQAAARQAGPGLHPIDDAALLDEVTALVERPNVLLCQFDPAFLAVPQECLILTMKANQK 314 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L + F++VSNI +D +A+++GN RVV RL DA F+++D+ Sbjct: 315 YFPLLDAAGKLTHRFLVVSNISPAD-PSAVIEGNERVVRPRLADAQFFFEQDR------- 366 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD- 407 K L+ R+ LD VV+HA++G+QGER+ R++ L IA+ I Sbjct: 367 -------------KKRLEDRVPGLD--KVVYHARLGSQGERMRRVQALAGGIARQIPPSF 411 Query: 408 -VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V +RA +L+K DL T++V EFPELQG +G+ YA E+ +AIE+H KPR + Sbjct: 412 PVEQAERAALLAKTDLLTDMVGEFPELQGIMGRYYAAHDGEDARVAEAIEDHYKPRFSGD 471 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ++P + + ++LADK +TL+ + I E+P+G KDP+ALRR TLGI+R+++E I LS Sbjct: 472 DLPRSDVGFALALADKTETLVGLFGIGERPTGDKDPFALRRHTLGILRMLMERGQGIELS 531 Query: 527 QFIEDQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +++E+ ++ F +DRL L ++ ++A+L L + Sbjct: 532 RYLENAVPVFSGVAGFSDPSADVQTFLYDRLANLLREQGWTAQEVDAVLALSPQILANVP 591 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + F + + + KR+ IL E + L+ AE L + Sbjct: 592 RRLEAVRAFAALPEAAALAAANKRVGNILRKSEGAKD--GSGFNADLLVEPAEIALSQAL 649 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +Q+ Y +L ++ P++ FFDQV+VN +D +R NRL+LL ++ Sbjct: 650 NAVAPQVQQFYAAGDYTAALKMLAALKVPVDTFFDQVMVNAEDPALRANRLALLARLQEA 709 Query: 692 ILIVINVQKI 701 + V ++ ++ Sbjct: 710 MNQVADLSRL 719 >gi|312874251|ref|ZP_07734285.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2052A-d] gi|311090321|gb|EFQ48731.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2052A-d] Length = 689 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 207/731 (28%), Positives = 350/731 (47%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNDWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNG-NSDYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ ++A Sbjct: 335 -------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGEKINISSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL K + + +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANILK---KADFSEAGQINPDLFENNSEKELYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLL------LDKSLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|297621503|ref|YP_003709640.1| glycyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] gi|297376804|gb|ADI38634.1| glycyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] Length = 1010 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 201/739 (27%), Positives = 354/739 (47%), Gaps = 79/739 (10%) Query: 1 MPD-----FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLY 55 MP+ FLLEI SEE+PA +L +I LL +E + Y+ + Y TP RL + Sbjct: 311 MPEGTKDHFLLEIGSEELPAAFVPIGLRNLESAIIELLNKENLSYEKLNVYGTPRRLSVV 370 Query: 56 LKGLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTIS------DCQIKKD 102 ++ L E +EER GP + G K A GFL+S G + + D +I+ Sbjct: 371 VENLQLTISEAVEERRGPPLDRAFNEDGTLKPAGAGFLKSIGKELLDRTAIENDEEIEIR 430 Query: 103 PKKG-DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKS 161 KG A ++ P + +L +P I + +PK M+W S+ RPL+ Sbjct: 431 EVKGSAYLFAKVKTPGKSAARILADSLPSIILNLEFPKKMKWGDLE-----ISYARPLQW 485 Query: 162 ILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDP 221 I+ ++ E ++ + ++ GN + GHR P P ++ + Y+ L E +L DP Sbjct: 486 IVAMIGTE-----VVPFIVGDLISGNASRGHRQLDPDPFEILNPQSYLETLREHRILADP 540 Query: 222 ECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRL 281 R+ I+ + L + +GL ++E ++ +++ LVEW V G+FD+ +L +P+E++ Sbjct: 541 AERKQEIIKQLNTLENQLGLHVIERDAVIPQVLNLVEWPMVAKGNFDENFLKIPQEVLIS 600 Query: 282 TIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQ 341 + +QK F G L F++ N ++ +++GN +V++ARL D + +++D Sbjct: 601 EMVEHQKYFPVADENGKLKPQFVITCNTLPTEN---MIRGNQKVLSARLSDGVFLYEKD- 656 Query: 342 NNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA 401 L P + +L V + + +G+ E+V R+ + + Sbjct: 657 -------------------LGVPFESFNEKLK--AVTYLSGLGSIYEKVLRLEGHVEVLQ 695 Query: 402 QLIDADVAL-VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 + + V RA L K DL +++V EFPELQG IG+ YA+ E AIEEH Sbjct: 696 EHLQISSLKNVHRAARLCKCDLVSDMVFEFPELQGTIGRYYALAHGEKPEVAQAIEEHWM 755 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P+G +PT++ + LA+K+D L++ ++ KP+ SKDPYALRR L IIR+++ K Sbjct: 756 PKGENAPLPTSETGSVLCLAEKIDNLLSCFSAGLKPTSSKDPYALRRQVLSIIRLVIAKK 815 Query: 521 IDIPLSQFIED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +PL ++ + ++ FF +R+K + D +EA + Sbjct: 816 FRLPLKNILDKCTRNFDPMHLSSKDQVIKEVMDFFTNRIKSIFQEYGFTKDEVEASIACG 875 Query: 564 NDNLLTIVDLIKHLNEFF-SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 D++ ++ L+EF SS + K KR LA ++ LL + Sbjct: 876 FDDIYDTFCRVQALHEFRASSEEFPKLYEVYKRAKGQLAN------HSAVAFDKGLLLKD 929 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 AEK L + +E++ H+ Y Q L+ + + F++V + +D ++++NR+ Sbjct: 930 AEKELDKTLDSTKEKFEEALSHQHYAQAYQLIAQMQPSLARLFNEVRILDEDEKIKENRI 989 Query: 683 SLLQYIKNIILIVINVQKI 701 +LLQ + ++ +++ KI Sbjct: 990 ALLQRVFSLFEQLLDFSKI 1008 >gi|325912694|ref|ZP_08175077.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners UPII 60-B] gi|325478115|gb|EGC81244.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners UPII 60-B] Length = 689 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 207/731 (28%), Positives = 350/731 (47%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNDWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNG-NSDYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ ++A Sbjct: 335 -------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGEKINISSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI + +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGLLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL + E +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANILKKADFSEAE---QINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLL------LDKSLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|289666195|ref|ZP_06487776.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 731 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 196/767 (25%), Positives = 327/767 (42%), Gaps = 104/767 (13%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G + + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLAQAFFEGVLSGLEKRGVAITRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAAGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P ++L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGT 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I Sbjct: 174 E-----VIPAELLGVRGDRITRGHRFMHEGTVSLAAPGDYVEALRAAHVLVDPDARRTRI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 IEEVEAAAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGKLTEQFIGIANIQSKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L L V + AK+G E+V R+ L + IA I AD Sbjct: 340 ------------LKQGLQAMGDGL--ASVTYQAKLGNVAEKVERVAKLAEMIAPQIGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VHARRAAQLAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ- 527 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ + Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDVKAT 505 Query: 528 ---------------------------------FIEDQNLILFFHDRLKLYLHDRDIRHD 554 + F DRL+ Y D+ + Sbjct: 506 LVIAVKLLPWDRLVRKATLKDEETIAAIDSAQYAQLASEIFDFILDRLRGYYADKGVPAT 565 Query: 555 LIEAILRPEN--------------------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 A+ + +L I + F + + E + K Sbjct: 566 HFNAVAALFSVAPEGAPTAHGVGASLGATHGSLYDFDRRIDAIGSFATLPEAEALAAANK 625 Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 RI IL K EI +I L AE+ L + +++ Y + L Sbjct: 626 RIRNILR---KVEGEIPGDIDTSLLREPAEEALAEAVEAAIGDTGDALHRHDYVAVLARL 682 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ + Sbjct: 683 ARLRPQVDAFFDAVMVNAEDPQLRANRLALLKKLGDRLGSVAAIEHL 729 >gi|21244927|ref|NP_644509.1| glycyl-tRNA synthetase subunit beta [Xanthomonas axonopodis pv. citri str. 306] gi|21110642|gb|AAM39045.1| glycyl-tRNA synthetase beta chain [Xanthomonas axonopodis pv. citri str. 306] Length = 745 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 198/781 (25%), Positives = 334/781 (42%), Gaps = 118/781 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ L ++ L++ G+ + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLAQALFDGVLSGLEKRGIAVARGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDARGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P D+L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I Sbjct: 172 ---GTAVIPAELLGVRGDRITRGHRFMHEGAVSLAAPGDYVDALRAAHVLVDPDARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +++ A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VDEVQAAARQAGGSARIGDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGTLTEQFIGIANIQSKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEIIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 LQARRAAALAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLIDL 505 Query: 529 IED------------------------------------------------QNLILFFHD 540 ++ + + F D Sbjct: 506 LKKAVSLVNSALASSQAGKQQTAAEAAKAQGVNVAERQSGGLWVPNVEATSEEIFDFILD 565 Query: 541 RLKLYLHDRDIRHDLIEAILRPE--------------------NDNLLTIVDLIKHLNEF 580 RL+ Y D+ + A+ +L I + F Sbjct: 566 RLRGYYADKGVPATHFNAVAALFSVTSEAVPTPTSVGAHPGATPGSLYDFDRRIDAIGIF 625 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + + KRI IL K EI +I L AE+ L + + Sbjct: 626 ATLPEADALAAANKRIRNILR---KVEGEIPGDIDTSLLREPAEEALAEAVEAAIGDTGD 682 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ Y + L + ++ FFD V+VN DD ++R NRL+LL+ + + + V ++ Sbjct: 683 ALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLRANRLALLKKLGDRLGSVAAIEH 742 Query: 701 I 701 + Sbjct: 743 L 743 >gi|325912088|ref|ZP_08174486.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners UPII 143-D] gi|325476038|gb|EGC79206.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners UPII 143-D] Length = 689 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 207/731 (28%), Positives = 348/731 (47%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNDWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNG-NSDYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ ++A Sbjct: 335 -------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGEKINISSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL E +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANILKKASFSEAE---QINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLL------LDKSLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|115465888|ref|NP_001056543.1| Os06g0103600 [Oryza sativa Japonica Group] gi|55296761|dbj|BAD67953.1| putative aminoacyl-t-RNA synthetase [Oryza sativa Japonica Group] gi|113594583|dbj|BAF18457.1| Os06g0103600 [Oryza sativa Japonica Group] gi|222634809|gb|EEE64941.1| hypothetical protein OsJ_19814 [Oryza sativa Japonica Group] Length = 1068 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 181/721 (25%), Positives = 335/721 (46%), Gaps = 68/721 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F+LEI +EE+P +A + L LI +L++ + + +R Y TP RL + ++ L+ Sbjct: 386 FVLEIGTEELPPHDVIEATKQLEKSLIQILEKRRLSHGKVRSYGTPRRLAVVVENLNMKQ 445 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E GP V G KA +GF R + D ++ K + A +++ Sbjct: 446 MEEEIELRGPPVAKAFDQEGRPTKAAEGFCRKNNVLI--DSLYRRTDGKTEYIYARVKES 503 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++VL +P I + +PKSMRW+ S + RP++ I + + I+ Sbjct: 504 ARFADEVLTEDLPTIISGISFPKSMRWN------SNIVFSRPIRWIFAL-----HGDLIV 552 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GN + G R + KV++ + Y+ LE+A +L+D + R+ IL+D+ LA Sbjct: 553 PFCFAGISSGNQSCGLRNSSLANFKVEAAELYLHTLEKAGILIDMQERKQRILHDSSILA 612 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 VG +++ L++E+I LVE +G +D +L LP++++ ++ +QK F ++ Sbjct: 613 EGVGGDIIAPDSLVQEVINLVEAPMPIIGRYDVSFLALPKDVLITVMQKHQKYFPVTSKT 672 Query: 297 -GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L CFI V+N + + +GN V+ AR EDA F+K D Sbjct: 673 MGNLLPCFITVANGAIKE--EVVRKGNEAVLRARYEDAKFFYKMDTQ------------- 717 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV---D 412 K L + +L ++FH ++GT +++ R+ ++A L+ + ++ Sbjct: 718 -------KKLSEFRDQLS--SILFHERLGTMLDKMKRVENTVAEVALLLGINEKMIPAIK 768 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A L+ +DL T IV EF L G + + YA+ + +A+ E PR + P Sbjct: 769 DAAALAMSDLATNIVTEFTSLAGIMARHYALRDGLSEQIAEALFEITLPRFSGDVFPKTD 828 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I +++ D+LD+L+ + +PS + DP+ LRR + G+++I++ENK + L++ + Sbjct: 829 PGIVLAVTDRLDSLVGLFGAGCQPSSTNDPFGLRRISYGLVQILVENKKNFDLTKALTLV 888 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++ F RL+ L D I +++ ++L + + Sbjct: 889 AEEQPITIDSGVIDEVVQFVTRRLEQLLVDEGINCEIVRSVLIERANCPYLASQTAIEME 948 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + K + + R +I+ K +LE+ + E+ L++ + I Sbjct: 949 AFSRTEDFPKIVEAYSRPARIIR---GKEIGSALEVDASVFEKDEERALWSAYLEVADKI 1005 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +D K + + +P+E FF V V +D VR+NRL+LL + ++ + ++ Sbjct: 1006 HPGVDIKAFADAS---LELLQPLEDFFTNVFVMAEDERVRNNRLALLTKVASLPKGIADL 1062 Query: 699 Q 699 Sbjct: 1063 S 1063 >gi|91790040|ref|YP_550992.1| glycine--tRNA ligase [Polaromonas sp. JS666] gi|91699265|gb|ABE46094.1| glycyl-tRNA synthetase beta chain [Polaromonas sp. JS666] Length = 731 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 203/755 (26%), Positives = 352/755 (46%), Gaps = 88/755 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L+ LK +G+ + + +P RL ++ ++ Sbjct: 7 NLLVELFVEELPPKALKKLGDAFAGVLLEQLKAQGLTTAGSVLTSFASPRRLAAHVTAVA 66 Query: 61 PHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAV 112 + +K + ++L P G A+ L++ G ++ +K+ P K + Sbjct: 67 VQAADKAVSQKLMPVTVGLDASGQATPALLKKLQALGADALAVAGLKRVPDGKAEALFYN 126 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + L+ + AI K+P PK M + S ++RP ++ + ++ Sbjct: 127 STVIGATLAEGLQKALLEAIAKLPIPKVMTYQLADG-WSDVKFVRPAHGLVALHGSD--- 182 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 ++ ++ + GNIT+GHRF A P+ +++ D Y L++ V+ R+ I Sbjct: 183 --VVAIEALGLKAGNITHGHRFEAAVDPVVLKNADGYAATLQKDGAVIASFAERKAEIAR 240 Query: 231 DAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 AS VG +ED LL+E+ LVE V + F+K++L +P+E + LT+K NQK Sbjct: 241 QLAAAASKVGGGARAIEDDALLDEVTALVERPNVLVCEFEKEFLDVPQECLILTMKANQK 300 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F +G L + F++VSNI +D +A++ GN RVV RL DA F+ +D+ Sbjct: 301 YFPLLDAQGKLTHKFLVVSNISPTDA-SAVIGGNERVVRPRLADAKFFFDQDR------- 352 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---- 404 K L R+A LD VV+H K+G+QGERV R+ + +I + + Sbjct: 353 -------------KKTLASRVAGLD--KVVYHNKLGSQGERVIRVSHIAYEIGKKLYPLD 397 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D+ A L+KADL T++V EFPELQG +G+ YA+ DAIE+H KPR Sbjct: 398 DSTAIHAQLAAQLAKADLVTDMVGEFPELQGTMGRYYALNDGLRPDIADAIEDHYKPRFA 457 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P N + + V+LADKL+TL+ + I P+G KDP+ALRR LG+IR++ E + + Sbjct: 458 GDELPRNSVGVIVALADKLETLVGMFGIGNLPTGDKDPFALRRHALGVIRMLTEKDLALD 517 Query: 525 LSQF--------------------------------------IEDQNLILFFHDRLKLYL 546 ++ + + F +DRL L Sbjct: 518 MNALLQSAVDVFGGAVYTEGVSPSAPVPGTKGVLSTGVVMDVQTREKITDFIYDRLAGSL 577 Query: 547 HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK 606 ++ ++A+L L + + + F + + + KR+ IL K Sbjct: 578 REQGYSAQEVDAVLALRPQRLGDVAKRLAAVRAFAALPEAPALAAANKRVGNILK---KA 634 Query: 607 NREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 + + + P+ L AE+ L + G + Y L ++ P++ FFD Sbjct: 635 DGTVEASVRPELLQEAAEQALAEALQSVGPKADAAFTAGDYAASLQGLAALKAPVDAFFD 694 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+VN +D +R NRL LL + + V ++ K+ Sbjct: 695 GVMVNAEDPALRANRLGLLATLHQAMNRVADLSKL 729 >gi|125624283|ref|YP_001032766.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris MG1363] gi|229470699|sp|A2RL88|SYGB_LACLM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|124493091|emb|CAL98055.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris MG1363] gi|300071065|gb|ADJ60465.1| glycyl-tRNA synthetase subunit beta [Lactococcus lactis subsp. cremoris NZ9000] Length = 673 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 212/717 (29%), Positives = 343/717 (47%), Gaps = 63/717 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIPA + + L+ + L E + + + ++ TP RL L ++ LS Sbjct: 1 MTNYLLEIGLEEIPAHLVTPSINQLAERMEAFLNENRLKFDKIIKFSTPRRLALIVEELS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE GP G KAI GF R G KGD Y A Sbjct: 61 DSSEAIDEEVKGPSAKIAKDAEGNWSKAIQGFSRGQGATPDDLIL------KGDYYYAKK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++L + I K+ + M+W F ++RP++ I+ +L ++ Sbjct: 115 HVDGVKSEEILSKVGDEVIAKMTFSTYMKWGNND-----FLFVRPIQWIVSLL-----ED 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I+ DL ++ + GHRF A I++++ + Y + E VL+D E R+ I Sbjct: 165 EIVAFDLLDVTANRFSRGHRFLANVEIELKNANDYASKMPENFVLVDAEHRKAEISAQIL 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LAS ++ KDLLEE+ +VE+ F+GSFD KYL +P E++ +++ NQ+ F Sbjct: 225 ALASENNWQVTLHKDLLEEVNNIVEYPTAFVGSFDPKYLSVPAEVLVTSMRDNQRYFEVY 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG LA FI V N A + +V GN +V+ ARLEDA FWK DQ Sbjct: 285 NQEGQLAPNFISVRNGNA-EHIENVVLGNEKVLFARLEDAEFFWKEDQKL---------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVAL 410 ++ +A+L V FHAKIG+ E ++R +++ K+A L D + Sbjct: 334 ----------KIEDLVAKL--AKVTFHAKIGSITEHMARTKLIAAKLADIAGLTDEEKVD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V R+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 382 VARSAEIYKFDLLTGMVGEFDELQGVMGEKYALLAGENANVAAAIREHYMPTSADGQLPE 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS---- 526 K+ ++ ADK+D++++F+ + PSGS DPYALRRA G+IRII + LS Sbjct: 442 TKVGSVLAAADKIDSVLSFFNVGLIPSGSNDPYALRRAVQGLIRIIEKMNWHFDLSLFID 501 Query: 527 --QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + ++ F R++ L ++ R+D++EA + N ++ +++ ++ Sbjct: 502 QFEGQNHAEILEFVKARVQKLLLEKLDRYDIVEAAINSSNFDITNMMESAFVIDGHKLHE 561 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + + + R ++ EI+P + E+ LY + Sbjct: 562 PFKPAIENVSRSINLVKKAADI-----AEINPALFEEDTEQALYDAVISLQNQWTYKPCE 616 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +++ I +L IE FFD V+V +D VRDNR++LL + + ++ + I Sbjct: 617 EKFRAIVHMLA---PAIEAFFDNVMVMAEDLAVRDNRIALLSEVVALTSVMADFSLI 670 >gi|198284299|ref|YP_002220620.1| glycyl-tRNA synthetase subunit beta [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666492|ref|YP_002426961.1| glycyl-tRNA synthetase, beta subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|226737046|sp|B7J7P8|SYGB_ACIF2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238689970|sp|B5EMS4|SYGB_ACIF5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|73612130|gb|AAZ78227.1| glycyl-tRNA synthetase beta chain [Acidithiobacillus ferrooxidans] gi|198248820|gb|ACH84413.1| glycyl-tRNA synthetase, beta subunit [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518705|gb|ACK79291.1| glycyl-tRNA synthetase, beta subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 694 Score = 528 bits (1361), Expect = e-147, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 320/713 (44%), Gaps = 63/713 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PAR Q + + I+ LL G+ + ++ Y TP RL L++K +S S + R GP Sbjct: 17 PAREQMPLQDAATGIIGQLLDAAGLQFGSIHGYVTPRRLALWIKDVSRQSLPQETLRRGP 76 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G A +GF RS G+ ++ +KG V + +L Sbjct: 77 LVARARDAQGKPTAAAEGFARSCGVSLDDLLTLE--TEKGPVLAWREVGTAQDSHALLPE 134 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 I + +P K MRW S++RP++ +L +++D + + G Sbjct: 135 IASRLVTSLPLRKRMRWGAGSD-----SFLRPVRWLLLR-----QGGQVLDWKMFGLDAG 184 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++GHR H P +++ + Y L +A V++D RR I LA + + + Sbjct: 185 GESFGHRVHHPQAVRISTPAGYAGSLLQAKVMVDFAERRAHISGKMAALADEMAVTPILP 244 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LL+EI GL EW V GSF YL +PEE + + +Q+ R R L ++ Sbjct: 245 EALLDEITGLNEWPVVLAGSFAADYLRVPEEALITVMMQHQRYVPLRGRNERLVPHYLFA 304 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 +N+ + D ++ GN+RV+ ARL DA FW +D+ L Sbjct: 305 ANLHSRDT-QVVIDGNNRVLRARLADAAFFWDQDRQI--------------------SLQ 343 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEI 426 R A L V+F +G+ ++ R++ L ++ D ++RA L K+DL + + Sbjct: 344 TRRAAL--AGVLFQDGLGSILDKTVRLQELAAALSPQFAVDAGDMNRAAALCKSDLLSGL 401 Query: 427 VREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTL 486 V EFPELQG +G YA EN AI +H P G + +P + +++ADKLDTL Sbjct: 402 VGEFPELQGIMGGHYARHDGENNRVATAIAQHYLPSGRDDEIPADAHGQCLAIADKLDTL 461 Query: 487 INFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------------- 532 F+AI + P+G +DP+ALRRA LG++RI+L+ + + L + + Sbjct: 462 CGFFAIGKVPTGDRDPFALRRAALGVLRIVLDAGVPLNLDEAVTRTLAAYGGAFARNRTE 521 Query: 533 ---NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF-FSSAKGEK 588 ++ FF DR+++Y + R D I A+L + L ++ L F A + Sbjct: 522 IRSAILDFFQDRMRVYFREEGFRADQIAAVLSRQPHEPLDARQRLEALALFQAEHAAADA 581 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 KRI +L E I PQY + E L+ + + +RY Sbjct: 582 LAALIKRINNLLRKEVISG---DWPIDPQYFMDPVENTLWDYWQALEQPLHAQLAERRYT 638 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 LL + ++ FFD V+V +D +R NRL+LL ++ L + + ++ Sbjct: 639 AALGLLAGLRPAVDQFFDGVMVLAEDPVLRQNRLALLARLQEAFLRIADFSQL 691 >gi|15607085|ref|NP_214467.1| glycyl-tRNA synthetase beta subunit [Aquifex aeolicus VF5] gi|11387164|sp|O67898|SYGB_AQUAE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|2984350|gb|AAC07870.1| glycyl-tRNA synthetase beta subunit [Aquifex aeolicus VF5] Length = 664 Score = 528 bits (1361), Expect = e-147, Method: Composition-based stats. Identities = 210/715 (29%), Positives = 340/715 (47%), Gaps = 73/715 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+PA + + A + L + LL ++ Y TP RL LY K Sbjct: 4 ELLIEIGTEELPAGVINPALDYLKDKINSLLNAR-----QVKTYGTPRRLTLYFKDFENE 58 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 EK E GP G KA++GFL+ +KKD KG+ V + Sbjct: 59 RKEKKEVIWGPPKNVAYDEKGNPTKALEGFLKKNNASLEEVKVLKKD--KGEYVAIVRKV 116 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++ + L+ + VP+PK MRW + ++ RP++ IL + ++ Sbjct: 117 IEKSPIEKLQEEFEEILLSVPFPKRMRW----TSSKRITFSRPVRWILALFNG-----QV 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L E+ N TYGHRF + + + + Y + L+E V+ D R+ IL + Sbjct: 168 LKLRFGELESSNKTYGHRFLSKGEVTINNPADYEKTLKEHYVIPDFNERKEIILRALEKS 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + VG + + L+EE+ LVE+ +G FD+KYL LP L+ T+ + + F + Sbjct: 228 SQEVGGKPSYPEGLVEEVTNLVEYPFPVLGKFDEKYLELPP-LVITTVAAHHQRFFCFEK 286 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L N F+ +SN + I +G +V+ ARLEDAL F++ D Sbjct: 287 DGKLLNYFLGISNNKP---NEKIKEGYEKVLRARLEDALFFYRED--------------- 328 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L K L + L V+FH K+G+ E+ R+ + +K+ L+ + V A+ Sbjct: 329 -----LKKDLKSLIPELK--KVLFHPKVGSMYEKEERMEKIAQKLCPLLKCEWEKVKEAV 381 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 LSK DL TE+V+E ELQG +G YA Q + A+ E PR + VP Sbjct: 382 WLSKVDLLTEMVKELDELQGYMGYVYAKAQGYDEEVAKALWEQYFPRSLEDKVPETTTGT 441 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 +SL+DK+D L +F+ E P GS DPY LRR+ GII+I+ +D+ L F E Sbjct: 442 ILSLSDKIDNLYSFFKAGEIPKGSSDPYGLRRSAFGIIKIVDVKNLDLNLEDFKEIYGEF 501 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGE 587 L+ F RL YL D D++ A+L +++ ++ L E S + Sbjct: 502 KQYPKLVEFLKQRLISYLEDY--PVDIVRAVLNVYSPMEPYKVINSVRVLYEASKSPEFP 559 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + +AKR+ +I+ + K + E+ + L EAE+ LY +++ ++K Sbjct: 560 SVVEAAKRVIRIIPKDWK-----NYEVDEKLLSEEAERELYQKLTE--------FENKEL 606 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +LL + E I+ FFD V V +D ++R+NR+SLL+ ++N+ + +IV Sbjct: 607 KSPLELL-PLKEYIDKFFDNVKVMAEDEKIRNNRISLLKRVENLFRTFGDFNEIV 660 >gi|90961888|ref|YP_535804.1| glycyl-tRNA synthetase beta chain [Lactobacillus salivarius UCC118] gi|122448989|sp|Q1WTP1|SYGB_LACS1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|90821082|gb|ABD99721.1| Glycyl-tRNA synthetase beta chain [Lactobacillus salivarius UCC118] Length = 693 Score = 528 bits (1361), Expect = e-147, Method: Composition-based stats. Identities = 204/734 (27%), Positives = 335/734 (45%), Gaps = 75/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M FLLEI EEIPA + + L LKE+ + + + Y TP RL + + GL Sbjct: 1 MAHTFLLEIGLEEIPAHVVTPSVNQLVQKTTKFLKEQRIDFDEVIPYSTPRRLTVKVTGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF+R G+ K+ K + Sbjct: 61 ADKQADIEEEAKGPSKKIALDDEGNWSKAAQGFVRGQGVTVDD--IFFKELKGTEYVYVK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + + +VL + + +P MRW + F ++RP+K ++ +L Sbjct: 119 KFIPGKPVSEVLTGM-KDVAMDLKFPTMMRWGSND-----FEYVRPIKWLVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ ++ +I G T GHRF + V S D Y+ LE V+ D R+ I Sbjct: 168 DEVVPFEILDIKTGRTTQGHRFLG-EAVDVPSADKYLETLETQKVIADAGVRKAEIRKQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ +V D+DLLEE+ LVE+ VF G F ++YL +P E++ ++K +Q+ F Sbjct: 227 DDLATENNWNIVVDEDLLEEVNNLVEYPTVFAGKFKEEYLQVPNEVLITSMKDHQRFFYV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L F+ V N D +V GN +V+ ARLEDA F++ DQ Sbjct: 287 TDKDGNLLPNFVSVRNG-NKDYLENVVAGNEKVLTARLEDAKFFYEEDQQ---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 + + RL V+FH KIGT E++ R+ +L K + + ++ Sbjct: 336 ----------HTIADYVERLK--KVMFHDKIGTIYEKMERVNLLAKFLGNKLGLSETELK 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA ++ K DL T +V EF ELQG +G+ YA LQ E+ + AI E P +P Sbjct: 384 DLDRASMIYKFDLVTGMVGEFSELQGIMGEIYARLQGEDDNVSTAIREEYMPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +S+ADKLD++ +F+A N PSGS DPYALRR LGIIRI L+ DI L Sbjct: 444 QSNVGAVLSIADKLDSIQSFFAANMIPSGSNDPYALRRQALGIIRIALDKGWDISLPLLH 503 Query: 530 EDQNLIL---------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E N F DRL L R D+++A++ + + Sbjct: 504 EAINYAYAEREDLYKNTQPITNVSETDSFVIDRLAQVLSGNKFRRDILDAVVARADMPFI 563 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + L++ ++ + + R+ ++ + + I + EK L Sbjct: 564 QALQAAQVLSKHAEDDNFKEVIEALTRVTRLAKKAPEFGSDA--VIDSTLFENDTEKVLA 621 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++ ++++ +L S+ + I +FD ++ DD +V++NRL L I Sbjct: 622 DEFAKVEAGYGDAEMNEKF----TILSSLKDSITAYFDATMIMADDEKVKNNRLLQLVKI 677 Query: 689 KNIILIVINVQKIV 702 + ++ K++ Sbjct: 678 AELTEDFGSLDKLI 691 >gi|227890915|ref|ZP_04008720.1| glycyl-tRNA synthetase beta chain [Lactobacillus salivarius ATCC 11741] gi|227867324|gb|EEJ74745.1| glycyl-tRNA synthetase beta chain [Lactobacillus salivarius ATCC 11741] Length = 693 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 204/734 (27%), Positives = 335/734 (45%), Gaps = 75/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M FLLEI EEIPA + + L LKE+ + + + Y TP RL + + GL Sbjct: 1 MAHTFLLEIGLEEIPAHVVTPSVNQLVQKTTKFLKEQRIDFDEVIPYSTPRRLTVKVTGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF+R G+ K+ K + Sbjct: 61 ADKQADIEEEAKGPSKKIALDDEGNWSKAAQGFVRGQGVTVDD--IFFKELKGTEYVYVK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + + +VL + + +P MRW + F ++RP+K ++ +L Sbjct: 119 KFIPGKPVSEVLTGM-KDVAMDLKFPTMMRWGSND-----FEYVRPIKWLVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ ++ +I G T GHRF + V S D Y+ LE V+ D R+ I Sbjct: 168 DEVVPFEILDIKTGRTTQGHRFLG-EAVDVPSADKYLETLETQKVIADAGVRKAEIRKQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ +V D+DLLEE+ LVE+ VF G F ++YL +P E++ ++K +Q+ F Sbjct: 227 DALATENNWNIVVDEDLLEEVNNLVEYPTVFAGKFKEEYLQVPNEVLITSMKDHQRFFYV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L F+ V N D +V GN +V+ ARLEDA F++ DQ Sbjct: 287 TDKDGNLLPNFVSVRNG-NKDYLENVVAGNEKVLTARLEDAKFFYEEDQQ---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 + + RL V+FH KIGT E++ R+ +L K + + ++ Sbjct: 336 ----------HTIADYVERLK--KVMFHDKIGTIYEKMERVNLLAKFLGNKLGLSETELK 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA ++ K DL T +V EF ELQG +G+ YA LQ E+ + AI E P +P Sbjct: 384 DLDRASMIYKFDLVTGMVGEFSELQGIMGEIYARLQGEDDNVSTAIREEYMPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +S+ADKLD++ +F+A N PSGS DPYALRR LGIIRI L+ DI L Sbjct: 444 QSNVGAVLSIADKLDSIQSFFAANMIPSGSNDPYALRRQALGIIRIALDKGWDISLPLLH 503 Query: 530 EDQNLIL---------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E N F DRL L R D+++A++ + + Sbjct: 504 EAINYAYAEREDLYKNTQPITNVSETDSFVIDRLAQVLSGNKFRRDILDAVVARADMPFI 563 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + L++ ++ + + R+ ++ + + I + EK L Sbjct: 564 QALQAAQVLSKHAEDDNFKEVIEALTRVTRLAKKAPEFGSDA--VIDSTLFENDTEKVLA 621 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++ ++++ +L S+ + I +FD ++ DD +V++NRL L I Sbjct: 622 DEFAKVKAGYGDAEMNEKF----AILSSLKDSITAYFDATMIMADDEKVKNNRLLQLVKI 677 Query: 689 KNIILIVINVQKIV 702 + ++ K++ Sbjct: 678 AELTEDFGSLDKLI 691 >gi|294624286|ref|ZP_06702992.1| glycyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601416|gb|EFF45447.1| glycyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 720 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 200/756 (26%), Positives = 332/756 (43%), Gaps = 93/756 (12%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A ++ L++ GV + + TP RL + Sbjct: 1 MSEHFPLLIELGTEELPVKALPGLARAFFDGVLSGLEKRGVAVTRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAQGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P D+L I+ AI +P PK MRW +++ RP++ ++ + + Sbjct: 119 FVHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGS 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E +I +L + IT GHRF + + + YI L A VL+DP+ RR I Sbjct: 174 E-----VIPAELLGVRGDRITRGHRFMHEGAVSLAAPGEYIDALRSAHVLVDPDARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +++ A+ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VDEVQAAATQAGGSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGKLTEQFIGIANIQSKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L L V + AK+G+ ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLQAMGEGL--ASVTYQAKLGSVADKVARVAALAEAIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDESYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L + Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKYW 505 Query: 529 IEDQNLI-------------------------------------------LFFHDRLKLY 545 I +++ F DRL+ Y Sbjct: 506 IVFSHILAARAYGELGLDGQVDKLKKELNESTAEQMVDRPIEQNELKFFYDFIVDRLRGY 565 Query: 546 LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK 605 D+ + A+ +L I + F + E + KRI IL K Sbjct: 566 YADKGVPATHFNAVAELRPASLYDFDRRIDAIGIFAQLPEAEALAAANKRIRNILR---K 622 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 EI +I L AE+ L + +++ Y + L + ++ FF Sbjct: 623 VEGEIPGDIDTTLLREPAEEALAEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFF 682 Query: 666 DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D V+VN DD ++R NRL+LL+ + + V ++ + Sbjct: 683 DGVMVNADDPQLRANRLALLKKLGERLGSVAAIEHL 718 >gi|301301336|ref|ZP_07207480.1| glycine--tRNA ligase, beta subunit [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851064|gb|EFK78804.1| glycine--tRNA ligase, beta subunit [Lactobacillus salivarius ACS-116-V-Col5a] Length = 693 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 204/734 (27%), Positives = 335/734 (45%), Gaps = 75/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M FLLEI EEIPA + + L LKE+ + + + Y TP RL + + GL Sbjct: 1 MAHTFLLEIGLEEIPAHVVTPSVNQLVQKTTKFLKEQRIDFDEVIPYSTPRRLTVKVTGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF+R G+ K+ K + Sbjct: 61 ADKQADIEEEAKGPSKKIALDDEGNWSKAAQGFVRGQGVTVDD--IFFKELKGTEYVYVK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + + +VL + + +P MRW + F ++RP+K ++ +L Sbjct: 119 KFIPGKPVSEVLTGM-KDVAMDLKFPTMMRWGSND-----FEYVRPIKWLVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ ++ +I G T GHRF + V S D Y+ LE V+ D R+ I Sbjct: 168 DEVVPFEILDIKTGRTTQGHRFLG-EAVDVPSADKYLETLETQKVIADAGVRKAEIRKQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ +V D+DLLEE+ LVE+ VF G F ++YL +P E++ ++K +Q+ F Sbjct: 227 DDLATENNWNIVVDEDLLEEVNNLVEYPTVFAGKFKEEYLQVPNEVLITSMKDHQRFFYV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L F+ V N D +V GN +V+ ARLEDA F++ DQ Sbjct: 287 TDKDGNLLPNFVSVRNG-NKDYLENVVAGNEKVLTARLEDAKFFYEEDQQ---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 + + RL V+FH KIGT E++ R+ +L K + + ++ Sbjct: 336 ----------HTIADYVERLK--KVMFHDKIGTIYEKMERVNLLAKFLGNKLGLSETELK 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA ++ K DL T +V EF ELQG +G+ YA LQ E+ + AI E P +P Sbjct: 384 DLDRASMIYKFDLVTGMVGEFSELQGIMGEIYARLQGEDDNVSTAIREEYMPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +S+ADKLD++ +F+A N PSGS DPYALRR LGIIRI L+ DI L Sbjct: 444 QSNVGAVLSIADKLDSIQSFFAANMIPSGSNDPYALRRQALGIIRIALDKGWDISLPLLH 503 Query: 530 EDQNLIL---------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E N F DRL L R D+++A++ + + Sbjct: 504 EAINYAYAEREDLYKNTQPITNVSETDSFVIDRLAQVLSGNKFRRDILDAVVARADMPFI 563 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + L++ ++ + + R+ ++ + + I + EK L Sbjct: 564 QALQAAQVLSKHAEDDNFKEVIEALTRVTRLAKKAPEFGSDA--VIDSTLFENDTEKVLA 621 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++ ++++ +L S+ + I +FD ++ DD +V++NRL L I Sbjct: 622 DEFAKVEAGYGDAEMNEKF----AILSSLKDSITAYFDATMIMADDEKVKNNRLLQLVKI 677 Query: 689 KNIILIVINVQKIV 702 + ++ K++ Sbjct: 678 AELTEDFGSLDKLI 691 >gi|239631413|ref|ZP_04674444.1| glycyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525878|gb|EEQ64879.1| glycyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 689 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 201/731 (27%), Positives = 340/731 (46%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +L+EI E++PA + + + + LKE + + + QY TP RL L + L+ Sbjct: 3 HQYLIEIGLEDMPAHVVTPSLQQFHDKTVAFLKENHLDHGAIDQYATPRRLALLIHDLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF R G+ + K K D Sbjct: 63 KQADVEEDVKGPAKKIAQDADGNWTKAAIGFSRGQGMTPDD--IVFKTIKGVDYVYLHKA 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L ++ I+ + +P M+W F +IRP+ ++ +L + Sbjct: 121 IKGKTAAAILPGML-DVIKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDA 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ + L ++ G T GHRF P+ + + Y+ L+ V+++P R+ I + H+ Sbjct: 170 IVPMKLLDVDAGRTTQGHRFLG-RPVTLGNAADYVAALKAQFVIVEPAARKQLISDQIHQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ ++ D DLLEE+ LVEW F G+FD+KYL +PE ++ ++K NQ+ F R Sbjct: 229 IAADHQWQIDLDADLLEEVNNLVEWPTAFAGNFDEKYLKIPEAVLITSMKDNQRYFYARD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G + N FI V N A D A ++ GN +V+ ARLEDA F+ DQ Sbjct: 289 ASGKMVNAFIGVRNGNA-DHLANVIAGNEKVLTARLEDAAFFYAEDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + + + RL V FH KI + ++++R RV+ +A D A + Sbjct: 335 -------KRSIADDVDRLK--AVSFHDKISSMYDKMARTRVIADLLADRFGLSATDKADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 386 DRAASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPISADGALPES 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++ADK D+L++F+A++ PSGS DPYALRR GI+R+I ++ +++ Sbjct: 446 LVGTVLAIADKFDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAKHDWPFAVAELQTT 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q+L F DR K L + IRHD+++A+ + +L I+ Sbjct: 506 IADALKAAGKTNNLDFTAHQQDLNAFMIDRAKQVLQGQKIRHDIVDAVTVRADADLAGIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D K L+ + + + R+ +I ++ + +++ +E +LY Sbjct: 566 DAAKILSAHADDTDFKPVMEALGRVLRITKKQQ-----VKVDVDTAKFENPSEGQLYDAT 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y L ++ +PI +FD +V DD+ +R NRL+ L + + Sbjct: 621 VATAKKFDDEPTEADYQ----ALKALADPINAYFDATMVMADDQAIRQNRLAALLQLAAL 676 Query: 692 ILIVINVQKIV 702 I +V +++ Sbjct: 677 IKQFGDVSQVI 687 >gi|116494987|ref|YP_806721.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus casei ATCC 334] gi|227535007|ref|ZP_03965056.1| glycine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|122263595|sp|Q038U3|SYGB_LACC3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116105137|gb|ABJ70279.1| glycyl-tRNA synthetase beta chain [Lactobacillus casei ATCC 334] gi|227187322|gb|EEI67389.1| glycine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 689 Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 201/731 (27%), Positives = 340/731 (46%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +L+EI E++PA + + + + LKE + + + QY TP RL L + L+ Sbjct: 3 HQYLIEIGLEDMPAHVVTPSLQQFHDKTVAFLKENHLDHGAIDQYATPRRLALLIHDLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF R G+ + K K D Sbjct: 63 KQEDVEEDVKGPAKKIAQDADGNWTKAAIGFSRGQGMTPDD--IVFKTIKGVDYVYLHKA 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L ++ I+ + +P M+W F +IRP+ ++ +L + Sbjct: 121 IKGKTAAAILPGML-DVIKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDA 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ + L ++ G T GHRF P+ + + Y+ L+ V+++P R+ I + H+ Sbjct: 170 IVPMKLLDVDAGRTTQGHRFLG-RPVTLGNAADYVAALKAQFVIVEPAARKQLISDQIHQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ ++ D DLLEE+ LVEW F G+FD+KYL +PE ++ ++K NQ+ F R Sbjct: 229 IAADHQWQIDLDADLLEEVNNLVEWPTAFAGNFDEKYLKIPEAVLITSMKDNQRYFYARD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G + N FI V N A D A ++ GN +V+ ARLEDA F+ DQ Sbjct: 289 ASGKMVNAFIGVRNGNA-DHLANVIAGNEKVLTARLEDAAFFYAEDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + + + RL V FH KI + ++++R RV+ +A D A + Sbjct: 335 -------KRSIADDVDRLK--AVSFHDKISSMYDKMARTRVIADLLADRFGLSATDKADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 386 DRAASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPISADGALPES 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++ADK D+L++F+A++ PSGS DPYALRR GI+R+I ++ +++ Sbjct: 446 LVGTVLAIADKFDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAKHDWPFAVAELQTT 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q+L F DR K L + IRHD+++A+ + +L I+ Sbjct: 506 IADALKAAGKTNNLDFAAHQQDLNAFMIDRAKQVLQGQKIRHDIVDAVTVRADADLAGIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D K L+ + + + R+ +I ++ + +++ +E +LY Sbjct: 566 DAAKILSAHADDTDFKPVMEALGRVLRITKKQQ-----VKVDVDTAKFENPSEGQLYDAT 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y L ++ +PI +FD +V DD+ +R NRL+ L + + Sbjct: 621 VATAKKFDDEPTEADYQ----ALKALADPINAYFDATMVMADDQAIRQNRLAALLQLAAL 676 Query: 692 ILIVINVQKIV 702 I +V +++ Sbjct: 677 IKQFGDVSQVI 687 >gi|254251460|ref|ZP_04944778.1| Glycyl-tRNA synthetase beta subunit [Burkholderia dolosa AUO158] gi|124894069|gb|EAY67949.1| Glycyl-tRNA synthetase beta subunit [Burkholderia dolosa AUO158] Length = 699 Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 198/714 (27%), Positives = 337/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + L L ++ +Y TP RL + ++ + +P++ E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPDRQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G ++ ++++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGFPNLTVAELERAQDGKAEAFFVNYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ R+ I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRKETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+ ERV R+ L +IA I ADVA RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSTLERVERLEALAGEIAPAIGADVAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAHARFANVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFIDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKL 697 >gi|191638499|ref|YP_001987665.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Lactobacillus casei BL23] gi|238693042|sp|B3WEK6|SYGB_LACCB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|190712801|emb|CAQ66807.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Lactobacillus casei BL23] gi|327382534|gb|AEA54010.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus casei LC2W] gi|327385731|gb|AEA57205.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus casei BD-II] Length = 689 Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 201/731 (27%), Positives = 340/731 (46%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +L+EI E++PA + + + + LKE + + + QY TP RL L + L+ Sbjct: 3 HQYLIEIGLEDMPAHVVTPSLQQFHDKTVAFLKENHLDHGAIDQYATPRRLALLIHDLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF R G+ + K K D Sbjct: 63 KQADVEEDVKGPAKKIAQDADGNWTKAAIGFSRGQGMTPDD--IVFKTIKGVDYVYLHKA 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L ++ I+ + +P M+W F +IRP+ ++ +L + Sbjct: 121 IKGKTAAAILPGML-DVIKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDA 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ + L ++ G T GHRF P+ + + Y+ L+ V+++P R+ I + H+ Sbjct: 170 IVPMKLLDVDAGRTTQGHRFLG-RPVTLGNAADYVAALKAQFVIVEPAARKQLISDQIHQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ ++ D DLLEE+ LVEW F G+FD+KYL +PE ++ ++K NQ+ F R Sbjct: 229 IAADHQWQIDLDADLLEEVNNLVEWPTAFAGNFDEKYLKIPEAVLITSMKDNQRYFYARD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G + N FI V N A D A ++ GN +V+ ARLEDA F+ DQ Sbjct: 289 ASGKMVNAFIGVRNGNA-DHLANVIAGNEKVLTARLEDAAFFYAEDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + + + RL V FH KI + ++++R RV+ +A D A + Sbjct: 335 -------KRSIADDVDRLK--AVSFHDKISSMYDKMARTRVIADLLADRFGLSATDKADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 386 DRAASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPISADGALPES 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++ADK D+L++F+A++ PSGS DPYALRR GI+R+I ++ +++ Sbjct: 446 LVGTVLAIADKFDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAKHDWPFAVAELQTT 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q+L F DR K L + IRHD+++A+ + +L I+ Sbjct: 506 IADALKAAGKTNNLDFAAHQQDLNAFMIDRAKQVLQGQKIRHDIVDAVTVRADADLAGIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D K L+ + + + R+ +I ++ + +++ +E +LY Sbjct: 566 DAAKILSAHADDTDFKPVMEALGRVLRITKKQQ-----VKVDVDTAKFENPSEGQLYDAT 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y L ++ +PI +FD +V DD+ +R NRL+ L + + Sbjct: 621 VATAKKFDDEPTEADYQ----ALKALADPINAYFDATMVMADDQAIRQNRLAALLQLAAL 676 Query: 692 ILIVINVQKIV 702 I +V +++ Sbjct: 677 IKQFGDVSQVI 687 >gi|158333790|ref|YP_001514962.1| glycyl-tRNA synthetase subunit beta [Acaryochloris marina MBIC11017] gi|189082264|sp|B0CD57|SYGB_ACAM1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|158304031|gb|ABW25648.1| glycyl-tRNA synthetase, beta subunit [Acaryochloris marina MBIC11017] Length = 712 Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 198/718 (27%), Positives = 324/718 (45%), Gaps = 70/718 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + + L+E + Q+++ Y TP RL + +GL Sbjct: 1 MATFLLEVGTEELPASFVESAIQQWRSHIPNSLEEHLLTPQSLKVYGTPRRLAILAEGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP G KA +GF R G++ +D +KG+ Sbjct: 61 DQQPDQTVEVKGPPAKAAFKDGKPTKAAEGFARKQGVEIKDFEL--RDTEKGEFIFVQKT 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + DVL ++P I + + MRWS + RP++ ++ +L K Sbjct: 119 TLGKPAVDVLADLIPTWIFSLEGKRFMRWSDGE-----VKFSRPIRWLVSLLDDHLIPIK 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ I + GHR P P+ ++ Y+ LE+A V +DPE R+ I H Sbjct: 174 -LENSTGTISSDRTSSGHRVLHPDPVTIKHPQDYVATLEKASVQVDPEQRQTLIKEQVHA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A AV + V +DLL E+ LVEW +G F+ ++L LP E+I + ++Q+ F Sbjct: 233 CAKAVKGKAVISEDLLAEVTYLVEWPTAVVGGFESEFLELPAEVITTEMVSHQRYFPVEA 292 Query: 295 REG-VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI +SN + I GN RV+ ARL D F+K DQ Sbjct: 293 PKGAKLLPHFITISNGDPA-KSDIISSGNERVIRARLADGQFFYKADQ------------ 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + PL + + +L+ V F +G+ +V RI+ +A+ + D Sbjct: 340 --------AMPLAEYLPKLET--VTFQEDLGSVRAKVDRIQANALWVAKQLQLDQKVTQQ 389 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V+RA L KADL T++V EFPELQG +G++YA+ E AI EH P+G + +P Sbjct: 390 VERAAQLCKADLVTQMVGEFPELQGVMGEKYAIASGEPTEIATAIVEHYLPKGANDQLPQ 449 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + V +AD+LDTL++ + + P+GS DP+ALRRA I+ I+ +D+ L Q Sbjct: 450 TLVGQIVGIADRLDTLVSIFGLGMIPTGSSDPFALRRAANAILNIVWAANLDLNLDQLLT 509 Query: 529 --------------IEDQNLILFFHDRLKLYLHD-RDIRHDLIEAILRPEND-------N 566 E Q L FF RL+ L D + I +DL+ A+L + + + Sbjct: 510 ETTAAFAQTFAKFQPEVQQLRDFFGQRLRSLLQDEQTIDYDLVNAVLGEKGEHTQRVLVD 569 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR--EISLEISPQYLLLEAE 624 +L D ++L ++ + + R ++ + + + + P+ +E Sbjct: 570 VLDGRDRAQYLQTIRTNGTLDTIYETVNRAARLATKGDLASDVLDPKGVVQPKLFEQSSE 629 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVRD 679 + Y + Q + + Y ++ L I + FF D VLV +D ++R Sbjct: 630 QVFYDGLLTLLPQTQAAQSSRDYQKLVQGLTKIAPSVSQFFDGDDSVLVIAEDADLRA 687 >gi|325526257|gb|EGD03874.1| glycyl-tRNA synthetase subunit beta [Burkholderia sp. TJI49] Length = 699 Score = 527 bits (1357), Expect = e-147, Method: Composition-based stats. Identities = 202/714 (28%), Positives = 336/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + L L ++ +Y TP RL + ++ + +PEK E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVDGELVFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNLSIADLERAQDGKAEAFFVNYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKFMTYQRPDG--TDVKFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFGDRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDIAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+ RV R+ L +IA I ADVA RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADVAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAYARFAGVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 527 AESTDAILAFFMDRLRGLLRERGYSAGEVDAVLGLNPTRVDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSEGATNGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKL 697 >gi|56751488|ref|YP_172189.1| glycyl-tRNA synthetase subunit beta [Synechococcus elongatus PCC 6301] gi|56686447|dbj|BAD79669.1| glycyl-tRNA synthetase beta chain [Synechococcus elongatus PCC 6301] Length = 728 Score = 527 bits (1357), Expect = e-147, Method: Composition-based stats. Identities = 194/760 (25%), Positives = 336/760 (44%), Gaps = 93/760 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A L L E + + Y TP RL + ++GL Sbjct: 1 MPAFLLEVGTEELPASFVAAAIAQWQNWLPTRLAEAQLTTTQISVYGTPRRLAVLIEGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G A GF R G++ ++ KG R Sbjct: 61 DRQPDREEEVKGPPASAAFKDGEPTPAAIGFARKQGVEVSD--FTVRETDKGAFVFVQKR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + + DVL+++VP Q + + MRW + RP++ ++ + ++ Sbjct: 119 EVGQPLADVLQSLVPSWTQDLEGKRFMRWGDGD-----LRFSRPIRWLVAL-----IDDQ 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+L + ++ GHR P P+ + Y+ LE A VL+DP R+ I Sbjct: 169 VLPLELTSGGSTVQSDRLSRGHRVLHPEPVAIAQASDYLATLEAASVLVDPAQRQAKIEA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +AS VG + +DLL E++ L EW +G F++++L LP E+ + + ++Q+ F Sbjct: 229 QTAAIASKVGGQAELPEDLLAEVVHLTEWPTAVLGQFEERFLSLPAEVSTMVMTSHQRYF 288 Query: 291 VTRTRE-----------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 L CF+ +SN + I GN+RV+ ARL D +F++ Sbjct: 289 PIYQATAQRDPAAIDARSELLPCFVTISNGDPA-ASETIAAGNARVIRARLADGEYFYRT 347 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D +PL+ +++L+ V F ++G+ +V RI + + Sbjct: 348 DS--------------------KQPLESFLSQLE--AVTFQEQLGSVRSKVDRIGAIAHR 385 Query: 400 IAQLIDA---DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 + + D LV RA L KADL +++V EFPELQG +G++YA + E + AI Sbjct: 386 LCDQLSIHSSDRLLVSRAAQLCKADLVSQMVYEFPELQGVMGEKYARVSQEPDAVATAIR 445 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 EH P+G + +P V+LAD+LDTL+ + + PSGS DP+ALRRA G++ I+ Sbjct: 446 EHYLPKGAGDQLPQTLTGRMVALADRLDTLVCIFGLGLLPSGSSDPFALRRAANGVLNIL 505 Query: 517 LENKIDIPLSQFIE--------------------DQNLILFFHDRLKLYLHD-RDIRHDL 555 + ++ + L+ I+ Q L FF RL+ L D + I +DL Sbjct: 506 WDGQLRLDLTALIQGIAADFHHAFPKLAGNAETLIQQLTDFFGQRLRTLLQDEQGIDYDL 565 Query: 556 IEAILRPE--------NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EK 605 + A+L + L ++ K L + + R ++ + + Sbjct: 566 VNAVLGDGDANYLLRAIADPLDALNRAKLLQTLRQDGRLVALYETVNRATRLASKGDLDT 625 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 + + ++ +E + ++ + + Y + + L + ++ FF Sbjct: 626 ATLDPTGLVNADLFQQPSEAAFLSALTTLQPLATAAQASQAYEPLVEGLLTAAPAVQSFF 685 Query: 666 D---QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 D VLV D ++ NRL+LL ++N ++ + IV Sbjct: 686 DGDTSVLVMDPDPAIQQNRLNLLGLLRNQARVLADFGAIV 725 >gi|167585508|ref|ZP_02377896.1| glycyl-tRNA synthetase subunit beta [Burkholderia ubonensis Bu] Length = 699 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 200/714 (28%), Positives = 330/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + L L +I +Y TP RL + ++ + +PEK E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLASRDLIEGELVFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAAGLPTAPLAKKLAALGHPNLSIADLERAQDGKAEAFFVNYAAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + + Y L + V+ R+ I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAITHARAYADTLRDKGRVIAHFGDRKETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 K L R+ L +VV+H K+GT RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KTLADRVPLL--ANVVYHNKLGTTLARVERLEALAGEIAPAIGADAAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +P+ +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVAVACTEHYQPRFSGDALPSTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRVLLEKQLPLDLVSLLRLAHARFATVPDV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ FF DRL+ L +R ++A+L L IV + + EF A+ E Sbjct: 527 AESTDAILAFFMDRLRGLLRERGYTAGEVDAVLSLNPTRLDDIVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P + AEK L+ ++ +Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSESGANGAVQPTLFVEAAEKALHEQLTAVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FFD V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDAFFDGVMVNADDPALRANRLALLSALHQQMNCVADISKL 697 >gi|313674005|ref|YP_004052116.1| glycyl-tRNA synthetase, beta subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312940761|gb|ADR19953.1| glycyl-tRNA synthetase, beta subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 689 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 212/729 (29%), Positives = 343/729 (47%), Gaps = 69/729 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LEI +EEIPA + + L L KE + ++ + TP RLF+ + GL+ Sbjct: 1 MSYYFLEILNEEIPADFVNVGIDYLGSAFENLFKENRIPFEKIVADGTPRRLFVLVSGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 H P++ EE +GP G F ++ L + ++ KG+ Sbjct: 61 DHQPDQEEEIVGPPASAAFDAEGNLTNVAMNFAKAKQLDVATLKKV--STPKGEYLSGKR 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R +++ V IQ +P+ K+MRW +F + RP+KS + + E Sbjct: 119 FTKGRSTREIISENVAKLIQNIPFKKTMRWGD-----KSFRFARPVKSFISLYDGE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ D+ I N T GHRF IK+ S + Y L+ A V+ + RR I++D Sbjct: 170 -LLPFDIDGIEASNKTAGHRFMWKDSIKIDSPEDYFNRLKNAFVVPERGVRREMIVSDIL 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A +++ D+ LL+ + LVE+ +GSF +++L LPEE++ ++K +QK F T+ Sbjct: 229 NIAGQYEVDVDIDESLLDTVTNLVEYPFAVLGSFSEEFLKLPEEVLITSMKNHQKYFYTK 288 Query: 294 T-REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + G ++N FI +SN + I +G RV+ ARL+DA F++ D+N Sbjct: 289 NRKNGKISNYFIGISNTKP--VNDNIRKGYERVLRARLKDAAFFFENDKNV--------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA--- 409 PL+ R+ L VV+ K+GT E++ R R + + + +++ Sbjct: 338 -----------PLESRVEELK--KVVYQEKLGTSYEKMERFREVSRYLTEVLSLSSEECK 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 L+DR L KADL TE+V EFPELQG +G+EY +Q E I EH P+ + +P Sbjct: 385 LIDRTAYLCKADLMTEMVYEFPELQGVMGREYGRIQGEPQEVYIGIYEHYLPKFSGDKIP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 VS+ADK+DT+ ++I P+G+ DPYALRR ++GII+II + I + + + Sbjct: 445 ETITGAVVSIADKIDTICGCFSIGLIPTGNNDPYALRRNSIGIIQIIRQKSYRIDIDKLV 504 Query: 530 E-----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 ++ F R K L I D ++A + N +L+ I Sbjct: 505 SKSLNLLKSKVNFDLEKVKDQVMEFIKQRYKQVLISEGIASDAVDASIDLFN-DLIKIEK 563 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 L + L++ S KRI IL E + EI L E E++L I Sbjct: 564 LARTLSDAKGKESFNSIAQSYKRINNILKKANHNRSEYNNEI----LTEEVERKLLDKID 619 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + Y + + L + I FFD+V+V V+D VR+NRLS+L +K + Sbjct: 620 GIKNEFMIRLSKEEYAEGLNTLLQLEPYINEFFDKVMVMVEDTNVRENRLSMLCSLKQLF 679 Query: 693 LIVINVQKI 701 + N+ I Sbjct: 680 DKIGNLSMI 688 >gi|282882490|ref|ZP_06291111.1| glycyl-tRNA synthetase, beta subunit [Peptoniphilus lacrimalis 315-B] gi|281297632|gb|EFA90107.1| glycyl-tRNA synthetase, beta subunit [Peptoniphilus lacrimalis 315-B] Length = 692 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 215/731 (29%), Positives = 365/731 (49%), Gaps = 70/731 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI EE+P+R + A E + + L E + Y ++ Y TP RL LY+ G+ Sbjct: 1 MNRYLLEIGVEELPSRFVNLAMEQIREKIEKSLNENDLKYDSLEVYATPRRLSLYINGIF 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +E GP V G K ++GF++S + Q + K A++ Sbjct: 61 DRQDDINKEVKGPSVKISFDEDGNPTKPLEGFMKSQNISLKDLEQREVKGNK--YVFAII 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K ++VLK I+P I + P++M+W + RP++ I+ IL + Sbjct: 119 KKRGLDAKEVLKNIIPDMIYHINLPRNMKWG-----GKNIKFPRPIRWIVSIL-----ND 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++++ + IP NIT GHRF I + ++D+Y + LEE V+LD R I ++ Sbjct: 169 EVVEFPFEGIPVSNITRGHRFLGSDNIVIDNVDNYAKLLEENFVILDQNKREEIIRFESK 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++A ++G E+ E+KDLLEE++ +VE+ G+ K++L LP+E+I T+ + + Sbjct: 229 KIARSLGGEIKENKDLLEELVYIVEYPTPIKGTIKKEFLILPKEVITTTMIDHLRYTPIY 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI + N D +++GN +V+ ARL DA F++ D Sbjct: 289 DDKGELLPYFITIRNG-NHDYEDIVIKGNEKVLGARLSDAKFFYEED------------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 +SKPL+ + L V F K+G E+ R + +I + + D + Sbjct: 335 -------ISKPLEDYVDALS--GVNFLDKLGNMREKEERNEAIALEIGKNLEVADETLES 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + R LSKADL T +V EF ELQG +G YA L E AI E PR +++P Sbjct: 386 LKRTAYLSKADLTTHMVVEFTELQGIMGSIYAKLSGEKDIVNSAIYEQYLPRFKGDDLPK 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + S+ADK+DT+ +AI++ P+GS DP+ LRR+ +G+I II N ++ L + Sbjct: 446 TTVGSIYSIADKIDTISGLFAIDKVPTGSLDPFGLRRSAIGLINIIRNNNWELNLDSILS 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +NL FF R+K+ L D D R+D+I+AIL E D + I Sbjct: 506 QALYEYVNKMGLTLNYEAVMKNLKEFFKQRIKVMLEDLDYRYDVIDAILESE-DKIHIIF 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++++F KF+ S +RI+ + + + E+ + +AEK+L++ I Sbjct: 565 KKAPQVDKWFKENDRSKFVDSFERIYNLTSKVSEFK-----EVDAELFKEDAEKKLFSQI 619 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++ + +++ +L S+ I+ FFD+V+V D +RDNRL+L+ ++N+ Sbjct: 620 ENIKAELEAYNNANKFYDYLNLCDSLTPYIDEFFDKVMVMDKDTSIRDNRLALINRVENV 679 Query: 692 ILIVINVQKIV 702 + + ++KIV Sbjct: 680 VSRIFAIEKIV 690 >gi|299822896|ref|ZP_07054782.1| glycyl-tRNA synthetase beta subunit [Listeria grayi DSM 20601] gi|299816425|gb|EFI83663.1| glycyl-tRNA synthetase beta subunit [Listeria grayi DSM 20601] Length = 689 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 212/727 (29%), Positives = 334/727 (45%), Gaps = 77/727 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + Y+N+ Y TP RL L +K + Sbjct: 1 MSKDFLLEIGLEEMPAKYVTSSVRQLKERVADWLLENKISYENIETYATPRRLALIVKAM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++IEE GP G KA GF RS + + K D Sbjct: 61 ADKQEDRIEEAKGPAKKIALDENGDWSKAALGFARSQQVDPSELGF--QAFKGVDYLFVK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + +L + I + +P SM W + +IRP+K ++ + Sbjct: 119 KEVPGQPTISLLPE-IKACITAMNFPVSMHWGSNE-----MRFIRPIKWLIALF-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + +I ++ + G +T GHRF ++ Y L E V+ + E R+ AI Sbjct: 168 KDVIPFEIAGVSTGKVTRGHRFLG-KEAEINEPSEYTARLLEQFVVANSEERKAAIREQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H + ++ D+ LLEE+ LVE+ V G F++KYL LPEE++ T+K +Q+ F Sbjct: 227 HEIELVENWKIEIDETLLEEVNNLVEYPTVLTGDFEEKYLTLPEEILITTMKEHQRYFPA 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +++G L FI V N + + +GN +V+ ARL DA F+ D Sbjct: 287 FSQDGTLLPHFITVRNG-NEEHLEIVAKGNEKVLRARLSDAEFFYLDD------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L + +D +A+L ++VFH K+GT E++ R+ + +A + D Sbjct: 334 --------LKQSIDDCVAKLR--NIVFHEKLGTLTEKMKRVEKVASLLADQLALSTEKKD 383 Query: 413 R---AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + + K DL T IV EFPELQG +G++YA+LQ E AI EH P +P Sbjct: 384 KLIHLAAIYKFDLVTHIVDEFPELQGLMGEKYALLQGEEADVAAAIREHYLPISAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 ++ +++ADKL+TLI F+A+ P+GS+DP++LRR LGI+RI+ NK +I L I Sbjct: 444 QTELGSILAIADKLETLIAFFAVGIVPTGSQDPFSLRRNALGIMRIMKANKWNIRLLPLI 503 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 Q +I F RLK + IR+D+I+A+L DN+ + Sbjct: 504 REVIKIEQAELDQSLSVEELQQEIIQFLKQRLKAIMLGEAIRYDIIDAVLDSTQDNVPEL 563 Query: 571 VDLIKHLNEFF-SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++ LN + S + + S R+ + EK+ + I P + EK L+ Sbjct: 564 LERASVLNNYSTDSGNFRETIESLSRVVNLAKKHEKE-----VVIDPALFENQEEKTLFE 618 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + Q + L ++ IE +FD++LV D VR+NRL LL + Sbjct: 619 ALESLKQNFQSLPVA----ARLESLIALKPAIEAYFDKILVMSGDDAVRNNRLELLFELS 674 Query: 690 NIILIVI 696 N I Sbjct: 675 NFIKEFA 681 >gi|324992006|gb|EGC23928.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK405] Length = 679 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 211/725 (29%), Positives = 344/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E++L + V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEILPS-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLG-KETEIASADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRGIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEKVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TPDLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|300813849|ref|ZP_07094154.1| glycine--tRNA ligase, beta subunit [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512036|gb|EFK39231.1| glycine--tRNA ligase, beta subunit [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 692 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 215/731 (29%), Positives = 364/731 (49%), Gaps = 70/731 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI EE+P+R + A E + + L E + Y ++ Y TP RL LY+ G+ Sbjct: 1 MNRYLLEIGVEELPSRFVNLAMEQIREKIEKSLNENDLKYDSLEVYATPRRLSLYINGIF 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +E GP V G K ++GF++S + Q + K A++ Sbjct: 61 DRQDDINKEVKGPSVKISFDEDGNPTKPLEGFMKSQNISLKDLEQREVKGNK--YVFAII 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K ++VLK I+P I + P++M+W + RP++ I+ IL + Sbjct: 119 KKRGLDAKEVLKNIIPDMIYHINLPRNMKWG-----GKNIKFPRPIRWIVSIL-----ND 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++++ + IP NIT GHRF I + ++D+Y + LEE V+LD R I ++ Sbjct: 169 EVVEFPFEGIPVSNITRGHRFLGSDNIVIDNVDNYAKLLEENFVILDQNRREEIIRFESK 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++A ++G E+ E+KDLLEE++ +VE+ G+ K++L LP+E+I T+ + + Sbjct: 229 KIARSLGGEIKENKDLLEELVYIVEYPTPIKGTIKKEFLILPKEVITTTMIDHLRYTPIY 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI + N D +++GN +V+ ARL DA F++ D Sbjct: 289 DDKGELLPYFITIRNG-NHDYEDVVIKGNEKVLGARLSDAKFFYEED------------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 +SKPL+ + L V F K+G E+ R + +I + + D + Sbjct: 335 -------ISKPLEDYVDALS--GVNFLDKLGNMREKEERNEAIALEIGKNLEVADETLES 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + R LSKADL T +V EF ELQG +G YA L E AI E PR +++P Sbjct: 386 LKRTAYLSKADLTTHMVVEFTELQGIMGSIYAKLSGEKDIVNSAIYEQYLPRFKGDDLPK 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + S+ADK+DT+ +AI++ P+GS DP+ LRR+ +G+I II N ++ L + Sbjct: 446 TTVGSIYSIADKIDTISGLFAIDKVPTGSLDPFGLRRSAIGLINIIRNNNWELNLDSILS 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +NL FF R+K+ L D D R+D+I+AIL E D + I Sbjct: 506 QALYEYVNKMGLTLNYEAVMKNLKEFFKQRIKVMLEDLDYRYDVIDAILESE-DKIHIIF 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ +F KF+ S +RI+ + + + E+ + +AEK+L++ I Sbjct: 565 KKAPQVDRWFKENDRSKFVDSFERIYNLTSKVSEFK-----EVDAELFKEDAEKKLFSQI 619 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++ + +++ +L S+ I+ FFD+V+V D +RDNRL+L+ ++N+ Sbjct: 620 ENIKAELEAYNNANKFYDYLNLCDSLTPYIDEFFDKVMVMDKDTSIRDNRLALINRVENV 679 Query: 692 ILIVINVQKIV 702 + + ++KIV Sbjct: 680 VSRIFAIEKIV 690 >gi|134296894|ref|YP_001120629.1| glycyl-tRNA synthetase subunit beta [Burkholderia vietnamiensis G4] gi|134140051|gb|ABO55794.1| glycyl-tRNA synthetase beta chain [Burkholderia vietnamiensis G4] Length = 699 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 198/714 (27%), Positives = 337/714 (47%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + L L ++ +Y TP RL + ++ + +P++ E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPDRQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G ++ ++++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPDLTIAELERAHDGKAEAFFVNYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + ++K+P PK M + + ++RP+ + + ++++ + + Sbjct: 139 LQAALDETLEKLPIPKVMTYQRPDG--TDVKFVRPVHRLTVL-----HDDRVVPVAAFGV 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPDALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDIAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+ RV R+ L +IA I ADVA RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADVAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAHARFEQVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 527 AEATDAIFAFFMDRLRGLLRERGYTAGEVDAVLSLNPTRVDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K ++ + P L+ AEK L+ ++ H+Q +D + Y Sbjct: 587 ALAAANKRISNILK---KSEGGVNGAVQPALLVEAAEKALHEQLAAVTPHVQSQLDARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKL 697 >gi|301066555|ref|YP_003788578.1| glycyl-tRNA synthetase subunit beta [Lactobacillus casei str. Zhang] gi|300438962|gb|ADK18728.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus casei str. Zhang] Length = 689 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 201/731 (27%), Positives = 340/731 (46%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +L+EI E++PA + + + + LKE + + + QY TP RL L + L+ Sbjct: 3 HQYLIEIGLEDMPAHVVTPSLQQFHDKTVAFLKENHLDHGVIDQYATPRRLALLIHDLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF R G+ + K K D Sbjct: 63 KQADVEEDVKGPAKKIAQDADGNWTKAAIGFSRGQGMTPDD--IVFKTIKGVDYVYLHKA 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L ++ I+ + +P M+W F +IRP+ ++ +L + Sbjct: 121 IKGKTAAAILPGML-DVIKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDA 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ + L ++ G T GHRF P+ + + Y+ L+ V+++P R+ I + H+ Sbjct: 170 IVPMKLLDVDAGRTTQGHRFLG-RPVTLGNAADYVAALKAQFVIVEPAARKQLISDQIHQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ ++ D DLLEE+ LVEW F G+FD+KYL +PE ++ ++K NQ+ F R Sbjct: 229 IAADHQWQIDLDADLLEEVNNLVEWPTAFAGNFDEKYLKIPEAVLITSMKDNQRYFYARD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G + N FI V N A D A ++ GN +V+ ARLEDA F+ DQ Sbjct: 289 ASGKMVNAFIGVRNGNA-DHLANVIAGNEKVLTARLEDAAFFYAEDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + + + RL V FH KI + ++++R RV+ +A D A + Sbjct: 335 -------KRSIADDVDRLK--AVSFHDKISSMYDKMARTRVIADLLADRFGLSATDKADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 386 DRAASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPISADGALPES 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++ADK D+L++F+A++ PSGS DPYALRR GI+R+I ++ +++ Sbjct: 446 LVGTVLAIADKFDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAKHDWPFAVAELQTT 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q+L F DR K L + IRHD+++A+ + +L I+ Sbjct: 506 IADALKAAGKTNNLDFAAHQQDLNAFMIDRAKQVLQAQKIRHDIVDAVTVRADADLAGIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D K L+ + + + R+ +I ++ + +++ +E +LY Sbjct: 566 DAAKILSAHADDTDFKPVMEALGRVLRITKKQQ-----VKVDVDTAKFENPSEGQLYDAT 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y L ++ +PI +FD +V DD+ +R NRL+ L + + Sbjct: 621 VATAKKFDDEPTEADYQ----ALKALADPINAYFDATMVMADDQAIRQNRLAALLQLAAL 676 Query: 692 ILIVINVQKIV 702 I +V +++ Sbjct: 677 IKQFGDVSQVI 687 >gi|170699169|ref|ZP_02890222.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria IOP40-10] gi|170135894|gb|EDT04169.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria IOP40-10] Length = 699 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 201/714 (28%), Positives = 332/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + L L ++ +Y TP RL + ++ + +PEK E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNLSIADLERAQDGKAEAFFVNYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIDTKTPGE-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTLLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSEGGANGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKL 697 >gi|15673078|ref|NP_267252.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. lactis Il1403] gi|25009321|sp|Q9CGK0|SYGB_LACLA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|12724052|gb|AAK05194.1|AE006341_13 glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. lactis Il1403] gi|326406646|gb|ADZ63717.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. lactis CV56] Length = 673 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 213/717 (29%), Positives = 346/717 (48%), Gaps = 63/717 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIPA + + L+ + LKE + + + ++ TP RL + ++GL+ Sbjct: 1 MTNYLLEIGLEEIPAHLVTPSINQLAERMETFLKENRLEFDKIIKFSTPRRLAIIVEGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE GP G KAI GF R G KGD Y A Sbjct: 61 EASEAIDEEVKGPSAKIAKDAQGNWSKAIQGFSRGQGATPDDLIL------KGDYYYAKK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++L + I K+ + M+W F ++RP++ I+ +L ++ Sbjct: 115 HIDGVKAEEILSKVGDEVIAKMTFSTYMKWGNND-----FLFVRPIQWIVSLL-----ED 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K++ DL ++ + GHRF A +++++ + Y + E VL+D E R+ I Sbjct: 165 KVVAFDLLDVTANRFSRGHRFLANVEVELKNANDYASKMPENFVLVDAEHRKAEISAQIL 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LAS ++ KDLLEE+ +VE+ F+GSFD KYL +P E++ +++ NQ+ F Sbjct: 225 ALASENKWQVTLHKDLLEEVNNIVEYPTAFVGSFDPKYLSVPAEVLVTSMRDNQRYFEVY 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG LA FI V N A + +V GN +V+ ARLEDA FWK DQ Sbjct: 285 NQEGQLAPNFISVRNGNA-ENIENVVLGNEKVLVARLEDAEFFWKEDQKL---------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVAL 410 ++ +A+L V FHAKIG+ E ++R + + K+A L D + Sbjct: 334 ----------KIEDLVAKL--AKVTFHAKIGSITEHMARTKEIAAKLADIAGLTDEEKRD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V R+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 382 VARSAEIYKFDLLTGMVGEFDELQGVMGEKYALLAGENANVSAAIREHYMPTSAEGELPE 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS---- 526 K+ ++ ADK+D++++F+ + PSGS DPYALRRA G+IRII + LS Sbjct: 442 TKVGSVLAAADKIDSVLSFFNVGLIPSGSNDPYALRRAVQGLIRIIEKMNWHFDLSLFID 501 Query: 527 --QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + ++ F R++ L ++ RHD++EA + N ++ +++ ++ Sbjct: 502 QFEGENHLEILDFVKARIQKLLLEKLDRHDIVEAAINSSNFDITNMMESAFVIDGHKLHE 561 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + + + R ++ + EI+P +AE+ LY V+ Sbjct: 562 PFKPAIENVSRSINLVKKAKDIK-----EINPTLFEEDAEEALYNVVISLQNQWTYMPGE 616 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +++ I L IE FF+ V+V +D VRDNR++LL + + ++ + I Sbjct: 617 EKFRAIVHSLA---PAIETFFESVMVMAEDLSVRDNRIALLSEVVALTSVMADFSLI 670 >gi|171317308|ref|ZP_02906504.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria MEX-5] gi|171097507|gb|EDT42345.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria MEX-5] Length = 699 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 202/714 (28%), Positives = 333/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + L L ++ +Y TP RL + ++ + +PEK E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNLSIADLERAQDGKAEAFFVNYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + AS G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQLNEHAS--GDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIDTKTPGE-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSEGGANGAVQPALLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKL 697 >gi|327462421|gb|EGF08746.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1057] Length = 679 Score = 525 bits (1352), Expect = e-146, Method: Composition-based stats. Identities = 211/725 (29%), Positives = 343/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAQGFVRGKGLTVGD---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ +++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLIVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLG-KETEIASADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIGT E + R + +AQ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGTLAEHMERTGKIATFLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRGIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEKVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TPDLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|89902455|ref|YP_524926.1| glycine--tRNA ligase [Rhodoferax ferrireducens T118] gi|89347192|gb|ABD71395.1| Glycine--tRNA ligase [Rhodoferax ferrireducens T118] Length = 744 Score = 525 bits (1352), Expect = e-146, Method: Composition-based stats. Identities = 206/770 (26%), Positives = 340/770 (44%), Gaps = 103/770 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--------------IYQNMRQYWT 48 + L+E++ EE+P + K E + + L ++ + M + + Sbjct: 5 NLLVELFVEELPPKALKKLGEAFAQQIYASLSDQWLISMPGTMAQDPDQADPPAMDVFAS 64 Query: 49 PHRLFLYLKGLSPHSPEKIEERL-GP------RVGAGKKAIDGFLRSTGLQTISDCQIKK 101 P RL + ++ + +P+ + P G A+ L++ G Sbjct: 65 PRRLGVLIRSVLLKAPDTQKLVKLMPVTVGLDAAGQATSALLKKLQALGADLTDPVAAVA 124 Query: 102 D-----PKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS----PISA 152 K + ++ L+ + AI K+P PK M + S+ Sbjct: 125 ALRRAPDGKVEALFYDSLVTGATLDAGLQKALEEAIAKLPIPKVMSYQLETDCELPGWSS 184 Query: 153 FSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRD 211 +++RP ++ + ++ + + + GN T GHRF A P+ + D Y Sbjct: 185 VNFVRPAHGLVAL-----RGSTVVPVKVLGLKAGNSTQGHRFEAKVSPVVIADADSYAAT 239 Query: 212 LEEAM-VLLDPECRRNAILNDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFD 268 LE+ V+ E RR AI+ + A +G ++ D+ LL+E+ GLVE V + +FD Sbjct: 240 LEQDGAVIAGFEQRRFAIVQQLAQAAERLGPSYRVLMDEALLDEVTGLVERPNVLVCAFD 299 Query: 269 KKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAA 328 ++L +P+E + LT+K NQK F G L N F++VSNI D +A++ GN RVV Sbjct: 300 AQFLDVPQECLILTMKANQKYFPLLDAAGKLTNQFLVVSNISPLDA-SAVIGGNERVVRP 358 Query: 329 RLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGE 388 RL DA F+ +D+ K L R+ L VV+H K+GTQGE Sbjct: 359 RLADAKFFFDQDR--------------------KKTLASRVEGLS--KVVYHNKLGTQGE 396 Query: 389 RVSRIRVLGKKIAQLI------DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYA 442 R R++ + IA+ + DA D A +L+KADL T++V EFPELQG +G YA Sbjct: 397 RTERVQSIASAIARQLADAGVADAFDGNADNAAMLAKADLLTDMVGEFPELQGIMGGYYA 456 Query: 443 VLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDP 502 AIE+H KPR + +P N + V+LADKL+TL+ + I P+G KDP Sbjct: 457 RHDGLREDIAFAIEDHYKPRFAGDELPRNTTGLVVALADKLETLVGMFGIGNVPTGDKDP 516 Query: 503 YALRRATLGIIRIILENKIDIPLS-------------------------------QFIED 531 YALRR LG+IR+++E ++ + L+ +F Sbjct: 517 YALRRHALGVIRMLVEKELPLDLNGLLACAFEEPRWGTAFKAGTDLGAAAPSVYQKFDAA 576 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 + L F DRL L ++ ++A+L + L I + + F + + Sbjct: 577 RPLADFIFDRLAGSLREQGYSAQEVDAVLALQPQRLGDIPKRLAAVRAFAALPEAPALAA 636 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KRI IL KK ++ +S L AE L+A + + Y Sbjct: 637 ANKRISNIL----KKAPDVDPHVSEVLLTEPAELALFAAMQSLAPLANAQFEALDYTASL 692 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FFD VLVN + ++R NR LL+ + + + V ++ ++ Sbjct: 693 QTLAALRAPVDAFFDSVLVNAEQLDLRLNRQGLLKSLHSAMNRVADLARL 742 >gi|221194456|ref|ZP_03567513.1| glycyl-tRNA synthetase, beta subunit [Atopobium rimae ATCC 49626] gi|221185360|gb|EEE17750.1| glycyl-tRNA synthetase, beta subunit [Atopobium rimae ATCC 49626] Length = 697 Score = 525 bits (1352), Expect = e-146, Method: Composition-based stats. Identities = 204/731 (27%), Positives = 328/731 (44%), Gaps = 73/731 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFLLEI +EE+P+ KA +++ L E G+ + R TP RL Y+K ++ Sbjct: 5 KDFLLEIGTEEMPSAPLLKAVAQYKKLIVSGLDEAGLAHGEARIISTPRRLSAYVKDVAL 64 Query: 62 HSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E E GP+ G KA GF R G+ S+ + D + A Sbjct: 65 ATEEINEVMRGPKCEIAFDAEGNPTKAALGFARKAGMDA-SELTRRVDDDGHEYVFAQRI 123 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P +L + I + WP+S RW +TH ++RP++ I +L E Sbjct: 124 IPSVSAIKILSELSERIIPAIDWPRSQRWGSTHE-----RFVRPIRWICALLGTE----- 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + ++ N T GHR V HY + LE A V L E RR+ IL+ R Sbjct: 174 VVPVTYADVISSNTTQGHRVLGSGTHVVDESSHYEQVLEAAYV-LSAERRRSVILDGIAR 232 Query: 235 LASAV-GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + G + + +L+E+I L EW V +G+FD+++L +P E+I ++ +NQ+ F Sbjct: 233 IEEERPGFHVDTPQKVLDEVINLTEWPSVLVGTFDEEFLKVPHEIITESMLSNQRYFPIY 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L F++VSN + ++ GN RVV ARL+DA F++ D Sbjct: 293 DANGELTREFVIVSNGNPA-CSQQVIDGNERVVRARLDDAKFFFEED------------- 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD----VA 409 L LD+ L DVVF K+GT ++V RI + +AQ + V Sbjct: 339 -------LKHSLDEFTGELS--DVVFQEKLGTVLQKVERIEKIAAFLAQADSENDDTVVE 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA LSKADL ++ V EF QG +G YA E+ DAI EH +PR + +P Sbjct: 390 HAHRAAHLSKADLVSQAVVEFTSQQGVMGGYYAKAAGESPDVADAIREHYRPRFAGDELP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------LE 518 + I V+ ADKLDT+ +AI+E P+GS DPYA+RRA +G+I ++ + Sbjct: 450 SGPIGRYVAAADKLDTICGLFAIDEPPTGSSDPYAVRRAAIGVIALLRTMPNVRLKDCIR 509 Query: 519 NKIDIP------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +D+ + + +F RL D I + I+A+ + + Sbjct: 510 YALDLYTEQGLQFDTVKVQREVEAYFLGRLVTIARDEKISQEAIDAVAHINVIDPEEFLR 569 Query: 573 LIKHLNEFF--SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L++ E ++ R ++ + + +++ L +E+ L Sbjct: 570 RTRALDDARIEDPENFENLAIAYNRASKL------GDISLGTDVNESIL-TASEQALLDA 622 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + ++Q+++ + L + +PI+ FFD VLV DD VR NRL LL Sbjct: 623 CKEGEKNVQDALTDNDFRSATRALGKLRKPIDKFFDDVLVMDDDTTVRGNRLRLLNRFTQ 682 Query: 691 IILIVINVQKI 701 + V ++ + Sbjct: 683 VFEHVADIGAL 693 >gi|172061660|ref|YP_001809312.1| glycyl-tRNA synthetase subunit beta [Burkholderia ambifaria MC40-6] gi|171994177|gb|ACB65096.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria MC40-6] Length = 699 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 201/714 (28%), Positives = 332/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + L L ++ +Y TP RL + ++ + +PEK E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAEGRPTAPLAKKLAALGHPNLSIADLERAQDGKAEAFFVNYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIDTKTPGE-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTLLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILR---KSEGGANGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKL 697 >gi|115352805|ref|YP_774644.1| glycyl-tRNA synthetase subunit beta [Burkholderia ambifaria AMMD] gi|115282793|gb|ABI88310.1| glycyl-tRNA synthetase beta chain [Burkholderia ambifaria AMMD] Length = 699 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 200/714 (28%), Positives = 332/714 (46%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + L L ++ +Y TP RL + ++ + +PEK E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPHLSIADLERAQDGKAEAFFVNYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKFMTYQRPDG--TDVKFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIDTKTPGE-IIEGNERVVRPRLADAKFFFEQDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTLLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILK---KSEGGANGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKL 697 >gi|281491595|ref|YP_003353575.1| glycyl-tRNA synthetase subunit beta [Lactococcus lactis subsp. lactis KF147] gi|281375313|gb|ADA64826.1| Glycyl-tRNA synthetase, beta chain [Lactococcus lactis subsp. lactis KF147] Length = 673 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 213/717 (29%), Positives = 346/717 (48%), Gaps = 63/717 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIPA + + L+ + LKE + + + ++ TP RL + ++GL+ Sbjct: 1 MTNYLLEIGLEEIPAHLVTPSINQLAERMETFLKENRLEFDKIIKFSTPRRLAIIVEGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE GP G KAI GF R G KGD Y A Sbjct: 61 EASEAIDEEVKGPSAKIAKDAQGNWSKAIQGFSRGQGATPDDLIL------KGDYYYAKK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++L + I K+ + M+W F ++RP++ I+ +L ++ Sbjct: 115 HIDGVKAEEILSKVGDEVIAKMTFSTYMKWGNND-----FLFVRPIQWIVSLL-----ED 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K++ DL ++ + GHRF A +++++ + Y + E VL+D E R+ I Sbjct: 165 KVVAFDLLDVTANRFSRGHRFLANVEVELKNANDYASKMPENFVLVDAEHRKAEISAQIL 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LAS ++ KDLLEE+ +VE+ F+GSFD KYL +P E++ +++ NQ+ F Sbjct: 225 ALASENKWQVTLHKDLLEEVNNIVEYPTAFVGSFDPKYLSVPAEVLVTSMRDNQRYFEVY 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG LA FI V N A + +V GN +V+ ARLEDA FWK DQ Sbjct: 285 NQEGQLAPNFISVRNGNA-ENIENVVLGNEKVLVARLEDAEFFWKEDQKL---------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVAL 410 ++ +A+L V FHAKIG+ E ++R + + K+A L D + Sbjct: 334 ----------KIEDLVAKL--AKVTFHAKIGSITEHMARTKEIAAKLADIAGLTDEEKRD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V R+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 382 VARSAEIYKFDLLTGMVGEFDELQGVMGEKYALLAGENANVSAAIREHYMPTSAEGELPE 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS---- 526 K+ ++ ADK+D++++F+ + PSGS DPYALRRA G+IRII + LS Sbjct: 442 TKVGSVLAAADKIDSVLSFFNVGLIPSGSNDPYALRRAVQGLIRIIEKMNWHFDLSLFID 501 Query: 527 --QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + ++ F R++ L ++ RHD++EA + N ++ +++ ++ Sbjct: 502 QFEGENHLEILDFVKARIQKLLLEKLDRHDIVEAAINSSNFDITNMMESAFVIDGHKLHE 561 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + + + R ++ + EI+P +AE+ LY V+ Sbjct: 562 PFKPAIENVSRSINLVKKAKDIK-----EINPILFEEDAEEALYNVVISLQNQWTYMPGE 616 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +++ I L IE FF+ V+V +D VRDNR++LL + + ++ + I Sbjct: 617 EKFRAIVHSLA---PAIETFFESVMVMAEDLSVRDNRIALLSEVVALTSVMADFSLI 670 >gi|257784497|ref|YP_003179714.1| glycyl-tRNA synthetase, beta subunit [Atopobium parvulum DSM 20469] gi|257473004|gb|ACV51123.1| glycyl-tRNA synthetase, beta subunit [Atopobium parvulum DSM 20469] Length = 695 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 204/732 (27%), Positives = 327/732 (44%), Gaps = 76/732 (10%) Query: 1 MP---DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M DFL EI SEE+P+ KA + +++ LK+ G+ + ++ TP RL Y+K Sbjct: 1 MAEVRDFLFEIGSEEMPSAPLQKAIAQFNKLVVSGLKDSGLSFGEVKILSTPRRLTAYVK 60 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 ++ + E E + GP+ G KA +GF R G+ + + D + Sbjct: 61 DVAEATEEISEVKRGPKAEIAFDAEGNPTKAAEGFARKCGVNANA-LTRRVDTDGHEYVF 119 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 A L P +L + I + WP+S RW + H ++RP++ + + +E Sbjct: 120 AELNIPSVPATKILSELATSWISALDWPRSQRWGSFHE-----RYVRPVRWLCVLFGSE- 173 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+ + ++ N T GHR P +V S Y + L++A VLL E R++ IL Sbjct: 174 ----IVPVTYADVTSSNTTQGHRVLGPGCHEVASPADYEQVLKDAGVLL-QEQRKDVILA 228 Query: 231 DAHR-LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A+ G + + + EE+I L EW QV +G+FDK++L +P E+I ++ +NQ+ Sbjct: 229 GIKEVEAARPGSHVDMPEKVFEEVINLTEWPQVLVGTFDKEFLNVPSEIITESMLSNQRY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F EG L FI+VSN + ++ GN RVV ARL+DA F++ D Sbjct: 289 FPIYDAEGKLTREFIVVSNADPT-CAERVIDGNERVVRARLDDAKFFFEED--------- 338 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L LD+ RL+ VVF K+GT ++ R+ L +IA + Sbjct: 339 -----------LKHSLDEFAQRLET--VVFQEKLGTVLQKTQRMEALAAEIALDETSSKE 385 Query: 410 LVDRAIVLSKA---DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + A + DL ++ V EF QG +G YA E AI EH +PR + Sbjct: 386 KAELAARAAHLAKADLVSQAVVEFTSQQGVMGGYYAEAAGEKSDVVAAIREHYRPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+ +I V++ADKLDT+ +AINE P+GS DPYA+RRA +G+I ++ ++ L Sbjct: 446 ELPSGQIGRFVAIADKLDTICGIFAINEPPTGSSDPYAVRRAAIGVIALVRSTS-NLNLK 504 Query: 527 QFIE-----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + I + +F RL D I D IEA+ + Sbjct: 505 KLIASSLELYRQQGLVVDESVQSQIEQYFIGRLASIAKDEKISADAIEAVSAIGVIDPDE 564 Query: 570 IVDLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + L+E + E + R + + + E+ L E + Sbjct: 565 FLLRARALDEARQNEPELFEDLATAYARAAHL------SDTSLGTEVDTALLTEP-ELSV 617 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 A + + ++ Y L + EPI+IFFD+VLV ++ VR NRL LL Sbjct: 618 LAACEEGQKQVASALAGADYAAAVSALSQLREPIDIFFDKVLVMDENDTVRRNRLRLLNK 677 Query: 688 IKNIILIVINVQ 699 + V ++ Sbjct: 678 FSQVFSNVADIS 689 >gi|34497111|ref|NP_901326.1| glycyl-tRNA synthetase subunit beta [Chromobacterium violaceum ATCC 12472] gi|34102968|gb|AAQ59332.1| glycyl-tRNA synthetase, beta chain [Chromobacterium violaceum ATCC 12472] Length = 686 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 218/710 (30%), Positives = 344/710 (48%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + A + + LK+ + + Y +P RL + L G+ P++ R Sbjct: 15 PPKALPRLAASFAQTITEELKKMQFVAADAAAVTYASPRRLAVQLPGVLAVQPDQHITRQ 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP G A+ GF RS G++ + + K DVY KP + L Sbjct: 75 GPAAAAGMKDGQPTPALAGFARSCGVEVSELSIV--NNGKQDVYAYSSTKPGEALSAQLA 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V +A++K+P PK MRW + ++RP+ ++ + +K+I ++ + Sbjct: 133 EVVSLALKKLPVPKLMRWGDSD-----VQFVRPVHGLIML-----HGDKVIAGEVLGLNS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + + V + D Y R + E V+ + RR I + A+ +G + Sbjct: 183 GNATRGHRFLSQGEVVVANADAYARVMHEQGKVIASFDARRELIRHKLAEAAAKLGATIA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 +L +E+ LVEW V F+ ++L +P+E + LT++ NQK F R G L N F+ Sbjct: 243 APDELFDEVTALVEWPVVLEAGFEAEFLQVPQECLILTMQQNQKYFPLLDRNGKLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN++ +D + IV GN RV+ ARL DA F+++D+ Sbjct: 303 LVSNVETAD-PSFIVGGNERVLRARLSDAKFFFEQDK--------------------KHR 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 LD R+ RL +VV+H KIGTQ ERV R++ + IA + AD AL RA L+KADL T Sbjct: 342 LDSRLPRL--ANVVYHNKIGTQLERVERLQSIAGAIAHQLGADAALAARAAYLAKADLVT 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 ++V EFPELQG +G YA E+ A+E H PR + +P KI+ V+LADKL+ Sbjct: 400 DMVGEFPELQGIMGMYYAQHDGEHAEVAAAVEGHYHPRFAGDTLPEGKIATAVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI-PLSQFIED------------ 531 ++ W I P+G KDP+ALRRA LG++R+ LE +D+ PL + + Sbjct: 460 AIVGIWGIGLIPTGDKDPFALRRAALGVVRMALEADLDLKPLLAIVAEAFPAGKLSANVA 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 + F DRLK +L D + D I+A+L L + ++ + F S + Sbjct: 520 DEVFGFMMDRLKNFLAA-DYKGDEIDAVLALSPSRLNEVRAVLAAVAAFKSLPEAAALAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ IL E + + L AE+ LYA + D ++ + Sbjct: 579 ANKRVNNILKKAEGE----IGAVDAALLQEAAEQALYAAVRDLAPAVEVKFAAHDFSGAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ P++ FFD V+V +D VR NR++LL + + V ++ + Sbjct: 635 SQLASLKAPVDAFFDGVMVMAEDARVRANRIALLASLAALFNRVADISLL 684 >gi|319796019|ref|YP_004157659.1| glycyL-tRNA synthetase, beta subunit [Variovorax paradoxus EPS] gi|315598482|gb|ADU39548.1| glycyl-tRNA synthetase, beta subunit [Variovorax paradoxus EPS] Length = 711 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 207/735 (28%), Positives = 345/735 (46%), Gaps = 69/735 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E++ EE+P + K + + +L L +G+ + Y +P RL +L ++ Sbjct: 7 LLVELFVEELPPKALKKLGDAFAGVLRDQLVAQGLAEAGSVLIAYASPRRLAAHLTHVAE 66 Query: 62 HSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVL 113 + +K + ++L P G A+ L + G + +K+ K + Sbjct: 67 RAADKAVSQKLMPVAVGLDASGQPTPALLKRLGALGADASAVPGLKRAMDGKAEALFYES 126 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS----PISAFSWIRPLKSILCILVAE 169 + + L+ + AI K+P PK M + S+ S++RP ++ + Sbjct: 127 TAKGATLAEGLQKALAEAIAKLPIPKVMSYQLESGCELPGWSSVSFVRPAHGLVAL---- 182 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNA 227 + ++ ++ + G T+GHRF A P+ ++ + Y L++ V+ E RR Sbjct: 183 -HGDAVVPIEALGLKAGRETHGHRFEAAVDPVVLRDANSYALQLQDDGAVIASFEARRAE 241 Query: 228 ILNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 I A VG + D LL+E+ LVE V + SF++++L +P+E + LT+K Sbjct: 242 IARQLAAAAVKVGGGSVPIHDDALLDEVTALVERPNVLVCSFEREFLEVPQECLILTMKA 301 Query: 286 NQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 NQK F L N F++VSNI D +A+++GN RVV RL DA F+ +D+ Sbjct: 302 NQKYFPLLDASSKLTNKFLVVSNISPDDA-SAVIEGNERVVRPRLADAKFFFDQDR---- 356 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 K L R+ L VV+H K+GTQGERV R+ + + IA+ + Sbjct: 357 ----------------KKSLASRVESLG--KVVYHNKLGTQGERVQRVMHIARGIAEKLG 398 Query: 406 --ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 A +A L+KADL T++V EFPELQG +G+ YA+ + + DAIE+H KPR Sbjct: 399 DAKVAAQATQAAQLAKADLVTDMVGEFPELQGTMGRYYALHDGLDAAVADAIEDHYKPRF 458 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 + +P N + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E + + Sbjct: 459 AGDELPRNSVGLVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLIEKDLAL 518 Query: 524 PLSQF-----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 L L F DRL L ++ ++A+L P Sbjct: 519 GLDTLLQDAAAQFKDIAGFDSSKATVELRDFILDRLAGSLREQGASAQEVDAVLAPLPQR 578 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 L + L+ + F + + KRI IL KK E +S L AEK Sbjct: 579 LGEVPKLLAAVRAFAALPAAAALAAANKRIGNIL----KKAPEADAHVSELLLQEPAEKA 634 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L+A +++ + Y L ++ EP++ FFD V+VN + ++R NRL LL Sbjct: 635 LHAAMAEVVPAANVQFEAGDYTGSLQTLAALREPVDAFFDGVMVNAEQADLRLNRLGLLM 694 Query: 687 YIKNIILIVINVQKI 701 + + V ++++ Sbjct: 695 SLHTAMNRVAQLERL 709 >gi|313633241|gb|EFS00110.1| glycyl-tRNA synthetase, beta subunit [Listeria seeligeri FSL N1-067] Length = 688 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 198/731 (27%), Positives = 337/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + E L + L+E + + ++ + +P RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVEQLKKRMRDWLEENQIAFAEIKTFSSPRRLTVLVEDM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S ++ ++ K + Sbjct: 61 AEEQANRVEEAKGPAKKIALDEEGNWSKAALGFAKSQKIEPAD--LTFREIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + +P SM W +IRP+K ++ + E Sbjct: 119 KEVIGEXXXALLPA-LQKVVTSMTFPVSMHWGNND-----LRYIRPIKWLIAMFGQE--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 II ++ + N + GHRF ++ Y L E V++D R+ AI Sbjct: 170 --IIPFEITGVTTSNTSRGHRFLG-KTTTIKQPSDYQNALLEQFVVVDATERKEAISGQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LAS ++ ED DLLEE+ LVE+ V G+F+++YL LPEE++ T+K +Q+ F Sbjct: 227 KELASLENWQIKEDADLLEEVTNLVEYPTVLAGNFEEEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +++G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQDGKLLPHFVTVRNG-NHENIETVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L + + +A+L ++VFH K+GT E++ R++ + IA +D AD Sbjct: 334 --------LKMTIAEAVAKL--PNIVFHEKLGTLTEKMKRVQKVALMIADYLDWKEADKE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P+ +P Sbjct: 384 DIIRLTDIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKTAIATAIREHYLPKSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +ADKL+T + F+ +N P+GS DP+ LRR+ G +RII N DIP+ + + Sbjct: 444 QTDLGSXXXIADKLETFVGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPVLELL 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L + IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERVEGAVELPSDDVKREVQTFLKNRLRVVLQNHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 VD + LN+ S + + R+ I E+ +E+ P E E L+ Sbjct: 564 VDRAQILNKHVESEWFRPTVEALTRVLNISKKYEEG-----VEVDPALFENEYEHALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKYDYASLTILER----LKAFAGLRTTIDDYFDNTLVMSDNLELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|332364608|gb|EGJ42377.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1059] Length = 679 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 212/725 (29%), Positives = 345/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVITSPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDSKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FFH R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFHARVEKMM-DRSIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + I+P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAINPALFENQEEKDLAAAIESVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + + Sbjct: 619 -------TSDLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKVGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 KFNQI 676 >gi|125718677|ref|YP_001035810.1| glycyl-tRNA synthetase subunit beta [Streptococcus sanguinis SK36] gi|229558583|sp|A3CQ05|SYGB_STRSV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|125498594|gb|ABN45260.1| Glycyl-tRNA synthetase beta chain, putative [Streptococcus sanguinis SK36] Length = 679 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 208/725 (28%), Positives = 342/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLG-KETEISSADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D++LL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDENLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +A+ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAKEAGLDANETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR D++ A+L+ N + +V+ Sbjct: 505 RLYGLKFDSLSYDNQEAVLDFFRARVEKMM-DRSTPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + I+P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAINPALFENQEEKDLAAAIEKVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLAANMDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|168058267|ref|XP_001781131.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667449|gb|EDQ54079.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1124 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 172/724 (23%), Positives = 323/724 (44%), Gaps = 70/724 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 F+LEI SEE+P + A L ++ LLKE+ + + ++ TP RL + ++ L+ Sbjct: 439 TFVLEIGSEELPPQDVSSAISQLKGVVPSLLKEKRLQHGSISVQGTPRRLVVMVEELATQ 498 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + +E GP G KA +GF + G+ + K K + A++++ Sbjct: 499 QDDNEKEVRGPPAAKAFDAEGNVTKAAEGFCKKNGV--RKEELYTKTDGKTEYVFAIVKQ 556 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ VL +PV + + +PK+MRW+ S S+ RPL+ +L + + I Sbjct: 557 QKKSSVQVLAEEIPVLLANLSFPKTMRWN------SQASYSRPLRWLLAL-----HGDTI 605 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G R I+V + Y+ +EA +++ + R ++I + L Sbjct: 606 VPFTYANVRSGRSCRVLRNSFQPTIQVAKAEDYVEATKEAGLVISMKERMDSIWAQSSEL 665 Query: 236 ASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A++V LLEE+ LVE +GSF++ +L LP +++ ++ +Q+ F Sbjct: 666 AASVNGLIPDEFKGGLLEEVANLVESPNPLLGSFNESFLKLPSDVLTTVMRKHQRYFPVV 725 Query: 294 TR-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R G L FI V+N Q A + +GN V+ AR EDA F++ D Sbjct: 726 DRLNGQLLPAFITVANGQIDQ--AVVRKGNEAVLRARYEDARFFYEADT----------- 772 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA--- 409 SKPL L + F K+G+ ++ R+ + A + D A Sbjct: 773 ---------SKPLADYRPLLQ--GITFQEKLGSMLDKSKRVEAMVDAFASALGLDEASLA 821 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + +A L+ ADL T +V+EF L G +G+ YA+ + + DAI EH PR +++ Sbjct: 822 IARQAAPLATADLATAMVKEFTSLSGIMGRHYALREGQPPQVADAIFEHALPRSAGDSLA 881 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ D+LD+L+ +A+ +P+ + DP+ LRR+ G+++ ++ N + LSQ + Sbjct: 882 KTDAGVLLAVVDRLDSLVGLFAVGCQPTAAADPFGLRRSAYGLVQTLVANGKVLDLSQAL 941 Query: 530 ED--------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +++F RL+ L D + ++L + Sbjct: 942 RFAADVQPLPVPDKVIDEVLIFIARRLEQLLVDGGANVVNVRSVLSERGTVPTLAARSVS 1001 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L + ++ + + R +I+ K+ + S +++ + E L+ Sbjct: 1002 QLETLATGEALDRVVAAYARPTRIVR---GKDVDPSWKVNEDLFAVPEEIALWDAYKQTA 1058 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + +D + + L EP+E FF V V ++ ++R+NRL+LL + N+ + Sbjct: 1059 SKLHTGVDVNVFVEASQALV---EPLEAFFKNVFVMAEEEDLRNNRLALLSSVANLPRGI 1115 Query: 696 INVQ 699 ++ Sbjct: 1116 ADLS 1119 >gi|325917986|ref|ZP_08180153.1| glycyl-tRNA synthetase beta chain [Xanthomonas vesicatoria ATCC 35937] gi|325535809|gb|EGD07638.1| glycyl-tRNA synthetase beta chain [Xanthomonas vesicatoria ATCC 35937] Length = 743 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 199/779 (25%), Positives = 333/779 (42%), Gaps = 116/779 (14%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G+ + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLAQAFFDGVLAGLEKRGIAVTRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P +L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGAQTAALLPDILREAIAAMPIPKPMRWGAHD-----YAFARPVQWLVLLFGN 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + +I +L + IT GHRF + + + +YI L A VL+D E RR I Sbjct: 174 D-----VIPAELLGVRGDRITRGHRFMHEGEVSLAAPGNYIDALRSAHVLVDAEARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVEAAAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI++ D +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGKLTEQFIGIANIESKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEAIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKGL 505 Query: 529 IED----------------------------------------------QNLILFFHDRL 542 I+ L F DRL Sbjct: 506 IQHAYNLAKQSASEVVLRQKKDAADKIRAIGVDAPTSHASQRSLHHEELTELFDFILDRL 565 Query: 543 KLYLHDRDIRHDLIEAILRPEN--------------------DNLLTIVDLIKHLNEFFS 582 + Y D+ + A+ + +L I + F + Sbjct: 566 RGYYADKGVPATHFNAVAALFSVAPEGTTAPHGVGAHLGAIHGSLYDFDRRIDAIGIFAT 625 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + E + KRI IL K + EI +I L AE+ L + +++ Sbjct: 626 LPEAEALAAANKRIRNILR---KVDGEIPGDIDTALLREPAEEALAEAVEAAIGDTGDAL 682 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + L + ++ FFD V+VN DD ++R NRL+LL+ + + + V ++ + Sbjct: 683 HRHDYVAVLARLARLRPQVDAFFDGVMVNADDLQLRANRLALLKKLGDRLGSVAAIEHL 741 >gi|82701684|ref|YP_411250.1| glycyl-tRNA synthetase, beta subunit [Nitrosospira multiformis ATCC 25196] gi|82409749|gb|ABB73858.1| glycyl-tRNA synthetase beta chain [Nitrosospira multiformis ATCC 25196] Length = 739 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 196/745 (26%), Positives = 334/745 (44%), Gaps = 90/745 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + K E + + LK +G+ ++ + +P RL ++L ++ +P+ + Sbjct: 26 PPKSLKKLGESFAQGIAAGLKRQGLAREDAAATPFASPRRLAVHLTCVAAQAPDTSSLKK 85 Query: 72 -GPRV------GAGKKAIDGFLRS-TG----LQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 P G A+ LRS G + +S + D K + Sbjct: 86 LMPVAVGLDENGQPTPALLKKLRSLCGDADPVPFLSQLKRAHD-GKTETLFLDSVVKGAT 144 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + + L+T + ++K+P + M + + +++RP +++ + ++++D+ Sbjct: 145 LAEGLQTALAGTLEKLPIARMMTYQLADG-WNTINFVRPAHALVAL-----HGKEVVDVS 198 Query: 180 LKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLAS 237 + + G T GHRF A P+ V+ D Y L+E V+ RR I A Sbjct: 199 ILGLTAGRETQGHRFEAMTSPLIVKDADSYEHQLQEEGAVIASFSHRRAEIERQLLAAAR 258 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 L+L LL+E+ LVE +V G F+ +L +P+E + LT++ NQK F G Sbjct: 259 KEDLKLTRYDALLDEVAALVERPRVLTGEFETGFLDVPQECLILTMQANQKYFPLLDARG 318 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ F++VSNI+ D + + GN RV+ +RL DA F+ +D+ Sbjct: 319 QLSHRFLIVSNIRPVDARSV-IAGNERVLRSRLADAKFFFDQDRR--------------- 362 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR--AI 415 K L R+ L VV+H K+GTQ ERV RI + + I + + A Sbjct: 363 -----KTLASRVEGLQR--VVYHNKLGTQAERVERIWAIAQTIGLQLGGNELAARAGEAA 415 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL T++V EFPELQG +G+ YA DAIE+H KPR + +P N + + Sbjct: 416 MLAKADLLTDMVGEFPELQGIMGRYYAKHDGVAEEVADAIEDHYKPRFAGDELPRNAVGV 475 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V+LADKL+TL+ + I + P+G KDP+ALRR LG+IRI++E ++ + L+ +E Sbjct: 476 CVALADKLETLVGLFGIGQIPTGDKDPFALRRHALGVIRILIEKEVPLALNILLEQTADI 535 Query: 532 -----------------QNLILFFHDRLKLYLHDR------------------DIRHDLI 556 + L F ++RLK Y I Sbjct: 536 FGQRIKGSAETIAKTATETLEGFIYERLKHYFSAEAIEGQITGFGRSPNEDRSTFSPQQI 595 Query: 557 EAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISP 616 +A+L L + + + F + + E + KR+ IL E + EI Sbjct: 596 DAVLALRPQLLNDVKKRLLAVRAFAALPEAESLAATNKRVGNILRKAE---VDAGGEIDT 652 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 L AE+ L+ + + Y L ++ P++ FFD V+VN +D Sbjct: 653 DLLQTPAEQALHQALDRIIPEADAAFAAGDYTASLQALAALKVPVDQFFDTVMVNTEDAA 712 Query: 677 VRDNRLSLLQYIKNIILIVINVQKI 701 +R NRL+LL ++ I+ + ++ ++ Sbjct: 713 LRHNRLALLAQMQKIMNRIADISRL 737 >gi|324994104|gb|EGC26018.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK678] Length = 679 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 345/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDRMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVITSPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L + G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEAEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L+ +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLN--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETVD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ + + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRSIPKDIVIAVLQSTHFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|256826493|ref|YP_003150452.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Cryptobacterium curtum DSM 15641] gi|256582636|gb|ACU93770.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Cryptobacterium curtum DSM 15641] Length = 694 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 186/731 (25%), Positives = 311/731 (42%), Gaps = 73/731 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M EI EEIPA A + L + + + + + + +P RL + GL Sbjct: 4 MHTLAFEIGVEEIPAFDLDSATKQLERLAPAAFEGARIPFDRIEVFSSPRRLIVMAYGLP 63 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E +E+ GP G KA GF R GL ++ K + AV Sbjct: 64 EATEELMEKYKGPAARIAFDEAGQPTKAAIGFARGKGLTPDDLE--RRLVKDVEYVFAVK 121 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + P + +L I+ I+ + WP+S RW+ ++RP++ I+ + + Sbjct: 122 QIPAVPVISLLPAILQGFIEDIKWPRSQRWAAYREV-----FVRPVRWIVALF-----DD 171 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I L + G T+GHR AP +V I+ + A V+ R I +D Sbjct: 172 QVIPLQFAGVSTGRDTWGHRVLAPGAHRVNEATDLIKVVRAASVVPSQSEREQIIRDDVA 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + L L E++ L E+ Q +FD+ +L +P+E+I + +Q+ F Sbjct: 232 AIEHTYDLVADLPAKTLLEVVNLSEFPQPLAATFDESFLQVPQEIIIDAMLMHQRYFPLY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L N F++VSN + I+ GN RVV ARL+DA F++ D Sbjct: 292 DKKGALTNRFVIVSNGNPA-CQETIISGNERVVRARLDDAKFFYEED------------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVAL 410 L +PL+ + +L VVF +GT ++ R+ +A +L AD Sbjct: 338 -------LKQPLESYVEKLS--SVVFQEDLGTVLDKTKRLVRQATHLAADAKLSKADARD 388 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++RA L KADL T V EF +QG +G YA+ E AI +H +PR + P Sbjct: 389 LERACYLCKADLVTNTVVEFTSVQGVMGGYYALASGETEQVAQAISQHYRPRFASDTAPD 448 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + V+ ADKLDT+ A+ + P+GS DP+ALRR+ +GII ++ + + + L I+ Sbjct: 449 SVVGQFVAFADKLDTVCGLIAVGQAPTGSSDPFALRRSAIGIIGML-DAGLPVSLLPAID 507 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + + FF R K+ L D + D + A+L I Sbjct: 508 CALDALMADGISFNRTTAREAISDFFIARTKVILRDEGLPIDAVNAVLAAGVTEPALIAA 567 Query: 573 LIKHLNEFFSS--AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L +S + R + ++ + + E L A Sbjct: 568 RTRALAAARASSPETMTDLATAFARADNL------RDASLGSKTDTSLF-TPEEADLQAA 620 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 I I + ++ Y + + L S+ PI+ FF+ V+V D+ +R+NRL LL + Sbjct: 621 IDAVTAAIPDLLNQGDYVRALEKLASLRAPIDTFFEAVMVMDKDQTLRENRLRLLNRFVS 680 Query: 691 IILIVINVQKI 701 V + ++ Sbjct: 681 TFKDVADFGEL 691 >gi|323350338|ref|ZP_08086003.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis VMC66] gi|322123523|gb|EFX95194.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis VMC66] Length = 679 Score = 522 bits (1344), Expect = e-145, Method: Composition-based stats. Identities = 210/725 (28%), Positives = 343/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVITSPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDSKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLATNLDQLFALSPIIDAFFDHTMVMAEDETVRNNRLALLTSLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|323340797|ref|ZP_08081049.1| glycyl-tRNA synthetase beta subunit [Lactobacillus ruminis ATCC 25644] gi|323091920|gb|EFZ34540.1| glycyl-tRNA synthetase beta subunit [Lactobacillus ruminis ATCC 25644] Length = 692 Score = 522 bits (1344), Expect = e-145, Method: Composition-based stats. Identities = 196/734 (26%), Positives = 337/734 (45%), Gaps = 78/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LLEI EEIPA + + L + LKE + + + Y TP RL L + GL Sbjct: 1 MSQNYLLEIGLEEIPAHVVTPSINQLVERMTSFLKENRLSFDKIEAYSTPRRLALKVIGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP G KA GF R G+ D ++ K + Sbjct: 61 ADKQEDIEELAKGPAKKIAYDKDGNWSKAAQGFARGQGVSV--DELFFQELKGVEYVYVK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + V + ++ +P MRW + F ++RP++ I+ +L Sbjct: 119 KFIAGKSAKEVLTS-VKEVVMEMKFPTMMRWGSND-----FEYVRPIRWIVSLL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I+ + ++ G + GHRF ++V++ D Y L++ MV+ D R+ I++ Sbjct: 168 DEIVSFKVLDLETGRKSQGHRFLG-KEVEVRNADAYPECLKQEMVIADARERKEIIMSQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA +V D DLLEE+ LVE+ VF GSFD+KYL +P+ ++ ++K NQ+ F Sbjct: 227 DELAKKNSWNIVVDPDLLEEVNNLVEYPTVFAGSFDEKYLSVPDAVLITSMKDNQRYFYV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V N +V GN +V+ ARLEDA F++ DQ Sbjct: 287 EDSDGKLLPHFVSVRNG-NDAYLENVVSGNEKVLTARLEDAKFFYEEDQ----------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA--- 409 + + + RL V+FH KIGT E++ R+ ++ + + + Sbjct: 335 ---------KQTISDYVERLK--KVMFHDKIGTIYEKMERVALIAAYLGKHLGLSQTQLA 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA ++ K DL T +V EF ELQG +G+ YA L E + A+ E P ++P Sbjct: 384 DLKRAAMIYKFDLVTGMVGEFSELQGVMGEIYASLFGETDAVASAMREEYMPTSSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----- 524 + I +S+ADK D++ F++ PSGS DPYALRR LGI+RI L+ ++ Sbjct: 444 ESTIGAVLSIADKADSIQAFFSAGMIPSGSNDPYALRRQALGIVRIALDKGWNLSVPLLH 503 Query: 525 ---LSQFIEDQNLI-------------LFFHDRLKLYLHDRDI-RHDLIEAILRPENDNL 567 +S F E +L F DR+ + + D + A L +++ Sbjct: 504 EAIMSAFKERGDLYANIDPEKNYAGVKDFMFDRVAQIIGSNNDVGRDALAAALANKDNEF 563 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 +++++ + L + S ++ + + R+ ++ + + + + +AEK+ Sbjct: 564 VSVLEAAETLTKHASDDDFKETIEALTRVSRLAKKADFE----AASVDESLFENDAEKKF 619 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + S+ K Y LH + I +FD +V DD +V+ NRLS L Sbjct: 620 HDACSNAQK----GYCCKSYEDKYQALHGLKGAISEYFDATMVMADDEKVKHNRLSQLVL 675 Query: 688 IKNIILIVINVQKI 701 + N+ +++++ Sbjct: 676 LSNLTTAFGSLEEL 689 >gi|332366390|gb|EGJ44141.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK355] Length = 679 Score = 522 bits (1344), Expect = e-145, Method: Composition-based stats. Identities = 210/725 (28%), Positives = 345/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLSFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLG-KETEIVSADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L+ +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLN--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ + + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTHFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E A + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEANFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 TA-------DLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|33865630|ref|NP_897189.1| putative glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 8102] gi|33632800|emb|CAE07611.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 8102] Length = 720 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 182/750 (24%), Positives = 321/750 (42%), Gaps = 84/750 (11%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLEI +EE+PA +A + L + L + + +++++ TP RL + + GL+ Sbjct: 3 STFLLEIGTEELPADFARQALDQLQDRVGRDLLDSRLDHKSVQVLGTPRRLVVRVHGLAD 62 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ E++ GP + G A GF + G+ ++ KG+ A +R Sbjct: 63 RQPDLEEDQKGPPIAQAFKDGVPGPAAIGFSKRCGVDPSQLE--VRNTPKGECVFASVRT 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + D+L+ ++P I + + MRW T + RP++ +L + + + Sbjct: 121 EGQNSVDLLQELIPAWINGLQGRRFMRWGTGSQ-----RFSRPIRWLLALKGVDLIPVE- 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + GHR H P+ + + + Y L A V++D + R I + Sbjct: 175 IPGADPPVRSDRFSRGHRLHGDQPLPIDTAEDYDDTLAAAGVIVDRQQRAALIRSQLDAS 234 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + + L EE++ LVE ++ GS +++L LP E+I ++ +Q+ + Sbjct: 235 ADQLNGLPDCPESLFEELVDLVESPRLLQGSIAERFLSLPPEVIITVMQAHQRYVPLKVP 294 Query: 296 EGVLAN----------CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 E L+ A I +GN RV+AARL DA F D+ Sbjct: 295 EVTPDPLQLEATVVLQRDFLLVGNGLEAADALITRGNERVLAARLADAEFFLSVDRR--- 351 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 +P R LD V F +G+ +R RI +++ ++ Sbjct: 352 -----------------QPSSARREALDR--VTFAEGLGSLLDRCQRIERTARQLVDQLN 392 Query: 406 ADVAL---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 D RA K DL +++V EFPELQG +G +Y + + E A+ EH PR Sbjct: 393 LDAHQGEAAIRAAHFCKHDLVSQMVGEFPELQGLMGGKYLLEEGEPTEVALAVVEHYLPR 452 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 G + +P++ V+LA++L+ L++ +A E+PSGS DPYALRRA G+++I+ + Sbjct: 453 GAGDQLPSSDAGAVVALAERLELLLSIFAKGERPSGSSDPYALRRAGNGLLQIVWDRGWR 512 Query: 523 IPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 + LS+F+ Q+L R+ L D DL++A+ Sbjct: 513 LDLSRFLGSAVEDWAALFPEFAIDSSALHQDLCQLLRQRIVSQLEDEGFVPDLVQAVSAE 572 Query: 563 EN------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE--ISLEI 614 + + + + + LN S + +R ++ + + +S + Sbjct: 573 SVATERLLADPMDVRERLDLLNALRQSKALPGLMAVVQRAARLAEKGDLVETDLTVSAVV 632 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVN 671 SP+ +E +Y V+ +RY ++ + L +E FF D V+V Sbjct: 633 SPERFESPSETAMYEVLVQLEP----LASGRRYRELAEALVQATPVLEAFFDGDDSVMVM 688 Query: 672 VDDREVRDNRLSLLQYIKNIILIVINVQKI 701 DD E+R NRL+LL ++N ++ I Sbjct: 689 ADDPELRRNRLNLLGVLRNQAGVLARFDLI 718 >gi|327490528|gb|EGF22309.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1058] Length = 679 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 344/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + + + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQMRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 RAFDLDFLDIKSGRTSRGHRFLG-KETEIASADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ FF R++ + DR+I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQAAVLDFFRARVEKMM-DRNIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEKVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + + Sbjct: 619 -------TSDLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTSKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 KFNQI 676 >gi|325697678|gb|EGD39563.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK160] Length = 679 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 207/725 (28%), Positives = 341/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + + Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVITSPLERGDMTVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDSKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ ++L+ + + +V+ Sbjct: 505 RLYELKFDSLSYENQEAVLDFFRARVEKMM-DRSIPKDIVTSVLQSTHFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKTAVESLSRVFNLAEKAQG-----HAAVNPALFENQEEKDLAAAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLAANLDQLFALSPVIDAFFDHTMVMDEDEAVRNNRLALLASLTAKAGQMA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|332362956|gb|EGJ40745.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK49] Length = 679 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 211/725 (29%), Positives = 343/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLG-KETEIASADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ +SLADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLSLADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ FF R++ + DR I D++ A+L+ + + +V+ Sbjct: 505 RLYELKFDSLSYDNQAAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTHFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + K ++P + EK L A I + Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGK-----TAVNPALFENQEEKDLAAAIEEVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLAADLDQLFALSPVIDAFFDHTMVMAEDETVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|297584640|ref|YP_003700420.1| glycyl-tRNA synthetase subunit beta [Bacillus selenitireducens MLS10] gi|297143097|gb|ADH99854.1| glycyl-tRNA synthetase, beta subunit [Bacillus selenitireducens MLS10] Length = 698 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 182/718 (25%), Positives = 328/718 (45%), Gaps = 70/718 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PAR + A +L+ L ++ + Y ++ + TP RL + + G+S P++ +E GP Sbjct: 16 PARFVNGAMNELAKRTEAFLSDKQIDYDDVNMFATPRRLAVKVNGVSTKQPDQEKEAKGP 75 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF + + K+ K + A L + +L Sbjct: 76 AKKIALDEEGNWTKAAIGFAKGQQVNEED--LFFKEVKGVEYVYAKLYIEGQETLQLLSG 133 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + I +P+PK+MRW + + RP++ ++ + E++I L++ + Sbjct: 134 -LHDVITGIPFPKNMRWGSHE-----MRYARPVRWLVAMY-----GEEVIPLEIAGVMAS 182 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 N+T GHRF + Y L V+ DP R++AI N +AS ++ D Sbjct: 183 NVTQGHRFLGQAA-TLNHASDYEHALLSQHVVADPFSRKDAIKNQIQDIASEQEWQIPMD 241 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LLEE+ LVE+ GSFD+++L +P+ ++ +++ +Q+ F + + G L F+ V Sbjct: 242 EGLLEEVTQLVEYPTALFGSFDERFLAVPDRVLITSMREHQRYFPVQDQSGSLLPYFVTV 301 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N + +GN +V+ ARL+DA F+ D+ L+ Sbjct: 302 RNGDHRH-LETVQKGNEKVLRARLQDAEFFFNEDK--------------------KHALE 340 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVDRAIVLSKADLC 423 +L +V+H +GT ++V R++ L +KI ++ D ++RA LSK DL Sbjct: 341 DNFEKL--HQIVYHEDLGTIADKVDRVQTLAEKIGSMLSLDSASKTAINRAARLSKNDLV 398 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T++V EF EL+G +G+ YA+ E AI EH P+ + VP+ +S+ADKL Sbjct: 399 TQMVNEFTELEGYMGEVYALKSGETPEVATAIREHYLPKQSGDPVPSGIEGAVISVADKL 458 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------------ 531 DT+ +++ P+GS+DP+ LRR T I++I + + + L++ Sbjct: 459 DTIAAHFSLGNIPTGSQDPHGLRRQTAAIVQIFRDFEWTLSLNELFNAAQDILQEKNLQK 518 Query: 532 -------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 ++ F R K L + IR+D+++A+L E DN+ + LN+ A Sbjct: 519 RNQAEVLRDFNQFVTLRYKNILQESGIRYDVVDAVLAFETDNVPLVFKKAAFLNDKLGDA 578 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 ++ + + R+ I + K + + EI + E LY I +S+ Sbjct: 579 SFKEDVEAFSRVTNIAS----KKQGSAEEIDQDLFESDLEVNLYQDYERIKPVIIKSLRD 634 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L I +FD ++V DD ++R+NRL+ + + ++ ++ + Q IV Sbjct: 635 MKPEAAYQALREAAPSIHKYFDGIMVMTDDEQIRENRLTQMSQLAALVRMIADFQSIV 692 >gi|325919827|ref|ZP_08181819.1| glycyl-tRNA synthetase beta chain [Xanthomonas gardneri ATCC 19865] gi|325549693|gb|EGD20555.1| glycyl-tRNA synthetase beta chain [Xanthomonas gardneri ATCC 19865] Length = 745 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 195/781 (24%), Positives = 332/781 (42%), Gaps = 118/781 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ GV + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLAQAFFDGVLHGLEKRGVAVTRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGKPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P D+L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + +I +L + +T GHRF + + + Y+ L A VL+D + RR I Sbjct: 172 ---GDAVIPAELLGVRGDRLTRGHRFMHQGEVSLAAPGDYVEALRAAHVLVDADARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G +D L++++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVEAAAKQAGGSARISEDNLQQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI + D +G RV+ R DA F+ D Sbjct: 289 FFPVLDAGGKLTEQFIGIANIVSKDVAEVA-KGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEVIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLLDL 505 Query: 529 IED------------------------------------------------QNLILFFHD 540 I+ + F D Sbjct: 506 IKKAVGLVSSALASSQASKQQTAAEAAKTQGVNVAQRQSGGLWVPNVEATAAEIFDFILD 565 Query: 541 RLKLYLHDRDIRHDLIEAILRPEN--------------------DNLLTIVDLIKHLNEF 580 RL+ Y D+ + A+ + +L I + F Sbjct: 566 RLRGYYADKGLPATHFNAVAALFSVAPEGAPTALGVGAHLGATHGSLYDFDRRIDAIGIF 625 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + E + KRI IL K EI +I L AE+ L + + Sbjct: 626 ATLPEAEALAAANKRIRNILR---KVEGEIPGDIDTSLLREPAEEALAEAVEAAIGDTGD 682 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ Y + L + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ Sbjct: 683 ALHRHDYVAVLARLARLRPQVDAFFDGVMVNAEDAQLRANRLALLKKLGDRLGSVAAIEH 742 Query: 701 I 701 + Sbjct: 743 L 743 >gi|324991739|gb|EGC23671.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK353] Length = 679 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 211/725 (29%), Positives = 342/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L E + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTEHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDAGGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTDFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLA 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYENQEAVLDFFRARIEKMM-DRSIPKDIVTAVLQSNNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + I+P + EK L I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAINPSLFENQEEKDLATAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLATNLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|257095241|ref|YP_003168882.1| glycyl-tRNA synthetase subunit beta [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047765|gb|ACV36953.1| glycyl-tRNA synthetase, beta subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 690 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 214/722 (29%), Positives = 353/722 (48%), Gaps = 64/722 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPH 62 L+E+ +EE+P + +E + + L + + Y TP RL + + ++ Sbjct: 6 LIELRTEELPPKSLKLLSEAFADTVFSALAAQQFTADDSVCTPYATPRRLAMTITHVAAR 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++I ER GP V G +A++GF+R+ G+ K K + ++A K Sbjct: 66 QPDRILERKGPAVASGVDGEGRPTRALEGFMRAAGVTFDQLH--KTSDGKAEYFVARQAK 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + L IV A++K+P PK MRW + ++RP+ ++ + I Sbjct: 124 AGEPLAAHLAEIVAQALKKLPIPKVMRWGDSEH-----QFVRPVHGLILL-----HGTSI 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ + G T GHRF A I V + Y L V+ RR AI Sbjct: 174 VPGEVLGLASGRSTLGHRFLASGDIVVDNPAAYAPSLLAGKVIASFADRRAAIAEQLAAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LL+E+ LVEW V++G F+ +YL +P+E + LT++ NQK F Sbjct: 234 AGKLGARINPADGLLDEVTALVEWPAVYVGGFEAEYLDVPQECLILTMQQNQKYFPLLDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N F++VSN+Q D A+I+QGN RVV RL DA F+ +D+ N Sbjct: 294 AGKLLNKFLIVSNMQVDD-PASIIQGNERVVRPRLADARFFYDQDRKNG----------- 341 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 R+ RL VV+H K+G+ G+R R+ + + IA+ + AD L +RA Sbjct: 342 ---------FATRVVRLG--SVVYHNKLGSLGDRAQRLGRVARSIAEKLHADANLAERAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 + SK DL T++V EFPELQG +G+ Y + + DAIE+H +PR + +P I+ Sbjct: 391 LFSKIDLLTDMVGEFPELQGIMGRYYLLHEGGLPVVADAIEQHYRPRFAGDALPAGNIAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-- 533 +LADKLD L+ F+ I + P+G KDP+ LRRA LG++RI++E + + L++ I++ Sbjct: 451 AAALADKLDALVGFFGIGQPPTGDKDPFGLRRAALGVLRILMETPLPLDLAELIDEAKST 510 Query: 534 --------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L+ F DRL+ L D D++EA+L + + + ++ Sbjct: 511 LIQQGVQLEAVDEPLLTFMLDRLRGMLRDAGHSVDVVEAVLAQRPTRIDLVPARLAAVSG 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KRI IL E E E L +AEK L+ + ++ Sbjct: 571 FQALPEALALAAANKRIGNILRKTE----EAFPEPDIALLEEDAEKDLFQRVLLIAPLVR 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + ++ Y ++ S+ ++ FFD+V+VNV + +R NRL LL+ + + + V ++ Sbjct: 627 SHVANEDYADALKVVASVRPEVDRFFDEVMVNVHEPLLRRNRLGLLKTLFDQLNAVADIA 686 Query: 700 KI 701 K+ Sbjct: 687 KL 688 >gi|257791137|ref|YP_003181743.1| glycyl-tRNA synthetase, beta subunit [Eggerthella lenta DSM 2243] gi|317488133|ref|ZP_07946708.1| glycyl-tRNA synthetase beta subunit [Eggerthella sp. 1_3_56FAA] gi|325832897|ref|ZP_08165570.1| glycine--tRNA ligase, beta subunit [Eggerthella sp. HGA1] gi|257475034|gb|ACV55354.1| glycyl-tRNA synthetase, beta subunit [Eggerthella lenta DSM 2243] gi|316912761|gb|EFV34295.1| glycyl-tRNA synthetase beta subunit [Eggerthella sp. 1_3_56FAA] gi|325485762|gb|EGC88226.1| glycine--tRNA ligase, beta subunit [Eggerthella sp. HGA1] Length = 696 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 200/729 (27%), Positives = 328/729 (44%), Gaps = 73/729 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 EI +EEIPA H+A L ++ L + + ++ Y TP RL + ++ Sbjct: 5 HTLAFEIGTEEIPAFDLHRATLQLEKLVPEALDAVRIPHGDVAVYTTPRRLIAIVADVAD 64 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E GP V G KA GF R G+ D +++ + A Sbjct: 65 ETEALEEVFRGPSVKIAFDADGNPTKAATGFARGKGVGV--DALERREENGVEYVFATKS 122 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R + ++L ++ I WPKS RW ++ + RP++ ++ +L E+ Sbjct: 123 IAARDVAELLPGVLEGVITGTSWPKSCRWG-----TTSEYFSRPVRWLVALL-----DER 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I + + GN+T GHRF AP P +V + + +E A V+ + R I + Sbjct: 173 VIPVRFAGLTAGNLTRGHRFLAPGPHEVATAADLLGVVEAAHVVSSEQAREAVIREGVAQ 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 G + L E++ L E V +G+FD+++L +PEE+I + +Q+ F Sbjct: 233 AEQRTGARAELPEKTLLEVVNLCEQPTVLVGTFDEEFLRVPEEIIVDAMLMHQRYFPLYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L N FI+VSN + I GN RVV ARL DA F++ D Sbjct: 293 ADGKLTNNFIVVSNGDPAHA-DTITGGNERVVRARLSDAKFFYEED-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALV 411 L PL+ + RLD +VVF +GT E+ RI L K +A QL +AD A Sbjct: 338 ------LKHPLETYVDRLD--EVVFQETLGTMKEKADRIVALAKHLAADAQLSEADAADA 389 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA L+KADL T V EF +QG +G YA E+ AI +H +PR + P + Sbjct: 390 ERAAYLAKADLVTNAVVEFTSVQGVMGSYYAAACGESDQVARAIADHYRPRFSGDEPPAS 449 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 + V++ADKLDT+ +A+ + P+GS DP+ALRR+ +GI+ ++ E + + L+ I+ Sbjct: 450 DVGRIVAMADKLDTVCGLFAVGQGPTGSSDPFALRRSAIGIVAML-EAGLPVSLAAAIDA 508 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + FF R K+ L D HD ++A+L + I+ Sbjct: 509 ALGTYQDAGIDFDRDAIRAEVADFFVTRTKVMLRDGGCSHDTMDAVLATGVEEPAQIIAR 568 Query: 574 IKHLNE--FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L + + + R + ++ ++ +E+ L +AE+ L A Sbjct: 569 TYVLEAERLGAPEAFDDLATAYARANNL------RDADLGVEVDEALL-SDAERALLAAT 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++E++ + L ++ PI+ FF+ VL+ DD +R+NRL LL + Sbjct: 622 DEAAACVKEALAVDHFGAALAALAALRAPIDAFFEDVLIMDDDLALRENRLRLLNRFVAV 681 Query: 692 ILIVINVQK 700 V + K Sbjct: 682 FAHVADFGK 690 >gi|170079051|ref|YP_001735689.1| glycyl-tRNA synthetase subunit beta [Synechococcus sp. PCC 7002] gi|238692788|sp|B1XK79|SYGB_SYNP2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169886720|gb|ACB00434.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. PCC 7002] Length = 713 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 184/719 (25%), Positives = 326/719 (45%), Gaps = 71/719 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +L+E+ +EE+PA A L + L E + + Y TP RL + ++GL Sbjct: 1 MATYLIEVGTEELPADFVAAAIAQLKDRVSHSLTEYFLTPDGIEVYGTPRRLAVLIQGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP G KA +GF R G++ + + +KGD + Sbjct: 61 DQQADREEEIKGPPAAAAFKEGQPTKAAEGFARKQGVELSALE--VRPTEKGDFVFVQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L+ +V + + MRW+ + RP++ ++ + + Sbjct: 119 TLGRPTPEILQELVLGWFTALEGRRFMRWADGD-----LRFPRPIRWLVSLWNDAVLPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ ++ G I+ GHR + + + Y+ L++A V ++P+ R I+ Sbjct: 174 LVNGS-GKLEAGRISRGHRILHQGDVTLNNAADYVVTLQQAFVEVNPQVREEKIVAGVKA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G E DLL E++ LVE+ +G + ++L LP E+I + T+Q+ F R Sbjct: 233 AAAEIGGEAEMPADLLAEVVNLVEYPTAVVGDIEAEFLELPTEVITTVMVTHQRYFAVRD 292 Query: 295 REGV--LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R+ L FI +SN I GN RV+ ARL D F++ D + Sbjct: 293 RQDKTKLLPKFITISNGDPK-KSEIIAAGNGRVIRARLADGQFFYRADCDEH-------- 343 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L+ + +L+ V F ++GT ++V RI + ++IA+ + AD Sbjct: 344 ------------LETYLPQLE--AVTFQEELGTMRDKVDRIMEISQQIAEQLGLSEADKE 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 ++ +L KADL T++V EFPELQG +G++YA++ E + + I EH PR + +P Sbjct: 390 IIASTAMLCKADLVTQMVYEFPELQGIMGQKYALVSGEAPAVAEGIFEHYLPRNADDILP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 V + D+LDTL++ + + PSGS DP+ALRRA II + + ++I L + + Sbjct: 450 QTLAGQVVGMGDRLDTLVSIFGLGMIPSGSSDPFALRRAANAIITVAWDAGLEIDLGELL 509 Query: 530 ED----------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPEN-------D 565 + L FF R++ L D + I +DL+ A+L + Sbjct: 510 AQGAKDFVTAHPDKTSPLEALQSFFIQRIQTLLQDEKGIDYDLVNAVLGDDAEYTERALT 569 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE--KKNREISLEISPQYLLLEA 623 +LL + D L + K + R ++ A + + + I+P+ + Sbjct: 570 DLLDVGDRAAFLQSIRDDGQLAKIYATVNRSAKLAAKGNLSTDSLDPTGVINPEKFAQNS 629 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVRD 679 E+ LYA + + + + + Y ++ D L ++ +E FF D VLV +D VR+ Sbjct: 630 ERDLYAGLVELVPTTEVARTERDYQKLIDGLAALAPTVERFFDGEDSVLVMAEDPAVRE 688 >gi|121609122|ref|YP_996929.1| glycine--tRNA ligase [Verminephrobacter eiseniae EF01-2] gi|121553762|gb|ABM57911.1| Glycine--tRNA ligase [Verminephrobacter eiseniae EF01-2] Length = 718 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 196/733 (26%), Positives = 337/733 (45%), Gaps = 77/733 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + K E + +L L G+ + Y +P RL ++ ++ +P++ ++++ Sbjct: 16 PPKALQKLGEAFAAVLGEQLLALGLASTASVVTPYASPRRLAAHVSAVAERAPDRAVQQK 75 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTIS-----DCQIKKDPKKGDVYLAVLRKPKRL 119 L P G A+ L++ G + KG P Sbjct: 76 LMPVAVGLDAAGQPSPALLKKLQALGADICDPAAAVAALRRAQDGKGQALFYDRIVPGAT 135 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHS----PISAFSWIRPLKSILCILVAEDAKEKI 175 + L+ + AI K+P PK M + S+ +++RP + ++ + + Sbjct: 136 LAAGLQQALDEAIAKLPIPKVMSYQLETDCALPGWSSVNFVRPAQGLVAL-----HGSTV 190 Query: 176 IDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAH 233 + + + GN T GHRF A P+ + D Y L V+ RR I + Sbjct: 191 VPVKALGLTAGNCTQGHRFEAVVSPVLLSDADGYAATLRSDGAVIASFAERRAEIAHQLA 250 Query: 234 RLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A+++G + ++ED+ LL+E+ GLVE +V + F+ ++L +P+E + LT+K +QK F Sbjct: 251 AAAASLGRAVRVIEDQALLDEVTGLVERPRVLVCEFESRFLDIPQECLILTMKAHQKYFP 310 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L + F++VSNI D ++ GN RVV RL DA F+ +D+ Sbjct: 311 LLDAAGRLTHQFLVVSNISPED-PHWVIDGNQRVVRPRLADAQFFFDQDRR--------- 360 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---- 407 KPL R+ L VV+H ++GTQ ERV R+R + IA+ + Sbjct: 361 -----------KPLAARVDAL--CKVVYHHQLGTQAERVQRVRAIAALIARTMAETTAGP 407 Query: 408 ------VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 D+A +L+KADL T +V EFPELQG +G+ YA+ DAIE+H KP Sbjct: 408 WADAALAQQADQAALLAKADLVTGMVGEFPELQGTMGRYYALNDGLGEVIADAIEDHYKP 467 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R +++P N++ + ++LADKL+TL+ + P+G +DP+ALRR LG+IR+++E ++ Sbjct: 468 RFAGDSLPRNRVGVVLALADKLETLVGMFGTGNLPTGERDPFALRRHALGLIRMLVEKEV 527 Query: 522 DIPLSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + L + L F ++RL L ++ ++A+L L Sbjct: 528 PLELHALLAGAWSVFGDKIGQDLSALTDFIYERLAGSLREQGYGAREVDAVLAQRPQRLA 587 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + F + + + KR+ IL + + ++P L +AE+ LY Sbjct: 588 LVEKRLAAVRAFAALPESPALAAANKRVANILKKADAVDPH----VNPGLLREQAEQDLY 643 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A + F D Y L + P++ FFD VLVNV+ ++R NRL LL+ + Sbjct: 644 AALQRFVPEADAQFDAGDYSLSLQTLAVLRAPVDAFFDDVLVNVEQMDLRLNRLGLLKSL 703 Query: 689 KNIILIVINVQKI 701 + V ++ ++ Sbjct: 704 HQAMNRVADLSRL 716 >gi|332358027|gb|EGJ35860.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1056] Length = 679 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 208/725 (28%), Positives = 343/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEVGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQSVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ ++L+ + + +V+ Sbjct: 505 RLYELKFDSLSYENQEAVLDFFRARVEKMM-DRSIPKDIVTSVLQSTHFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEKVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TPDLAANLDQLFALSPVIDAFFDHTMVMDEDEAVRNNRLALLASLTAKAGQMA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|297734621|emb|CBI16672.3| unnamed protein product [Vitis vinifera] Length = 1071 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 179/720 (24%), Positives = 332/720 (46%), Gaps = 67/720 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+P + A++ L +++ LL ++ + + ++ + TP RL + +K LS Sbjct: 390 FLLEIGTEELPPQDVASASQQLKDLIMQLLDKQRLGHSEVQAFGTPRRLVVCVKNLSTKQ 449 Query: 64 PEKIEERLGPRVG-------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E E GP V KA +GF R + D KK K + + + Sbjct: 450 AENEVEVRGPPVSKAFDGQRNPTKAAEGFCRRYCVSL--DSLYKKVDGKTEYVYVRVMES 507 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 RL +VL +P I K+ +PKSMRW+ S + RP++ IL + + ++ Sbjct: 508 ARLALEVLSEDLPRIIAKISFPKSMRWN------SQVMFSRPIRWILAL-----HGDVVV 556 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + GN++YG R + IKV+S + Y + A + LD E R+ IL + LA Sbjct: 557 PFMFAGVLSGNLSYGLRNTSSATIKVESAESYATVIRNAGISLDIEERKQTILEQCNALA 616 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 V ++ LL+E++ LVE +G F + +L LP++L+ + ++ +QK F Sbjct: 617 KGVNGHILLQGSLLDEVVNLVEAPVPVIGKFKESFLELPKDLLTMVMQKHQKYFAITDDS 676 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+N ++ + +GN V+ AR EDA F++ D Sbjct: 677 GRLLPYFITVANGAINEM--VVRKGNEAVLRARYEDAKFFYEMDTR-------------- 720 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK--IAQLIDADVAL-VDR 413 K + ++L+ ++FH K+GT +++ R++ + + +A ++ D + Sbjct: 721 ------KKFSEFRSQLE--GILFHEKLGTMLDKMIRVQNMVAELSLALQVNEDKLQIIQD 772 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+ +DL T +V EF L G + + YA+ + +A+ E PR + VP + Sbjct: 773 AASLAMSDLATAVVTEFTSLSGIMARHYALRDGYSEQIAEALFEITLPRNSGDIVPKTDV 832 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------- 526 I +++AD+LD+L+ + +PS + DP+ LRR + G++++++E ++ L Sbjct: 833 GIVLAVADRLDSLVGLFGAGCQPSSTNDPFGLRRISYGLVQVLVEKDKNLDLRHALQLAA 892 Query: 527 -------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F RL+ +L DR+I +++ +IL + ++ Sbjct: 893 AVQPITIEANIIDDVHQFVTRRLEQFLVDREISPEVVRSILTERANWPCLATKSAYKMDA 952 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 K + + R +I+ K+ E +E+ E+ L+ I Sbjct: 953 MSRGELLPKVVEAYSRPTRIVR---GKDVEADMEVDEASFETNEERALWRAFLSVRNKIY 1009 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + L P+E FF+ V V V++ +R NRL+LL+ I ++ + ++ Sbjct: 1010 PGIEVDDFFEASSQLLQ---PLEDFFNNVFVMVEEERIRKNRLALLKKIADLPKGIADLS 1066 >gi|157150548|ref|YP_001449885.1| glycyl-tRNA synthetase subunit beta [Streptococcus gordonii str. Challis substr. CH1] gi|229558577|sp|A8AVS5|SYGB_STRGC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157075342|gb|ABV10025.1| glycyl-tRNA synthetase, beta subunit [Streptococcus gordonii str. Challis substr. CH1] Length = 679 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 208/725 (28%), Positives = 345/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I++ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVIASPLERGDMIVDQIQ 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L+ +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLN--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ + + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTHFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENKEEKDLAAAIEKV-- 616 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + D ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 617 -----VLTSDLAANLDQFFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQIA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|116070688|ref|ZP_01467957.1| Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. BL107] gi|116066093|gb|EAU71850.1| Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. BL107] Length = 720 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 185/750 (24%), Positives = 313/750 (41%), Gaps = 86/750 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FLLEI +EE+PA +A + L ++ L E + + ++ + TP RL + + L H Sbjct: 4 TFLLEIGTEELPADFARQALDQLRDRVLHDLAEARLSHGSISIFGTPRRLVVSVPNLDDH 63 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ EER GP V G A GF + G+ Q +D KG A + Sbjct: 64 QPDLREERKGPPVAQAFKDGVPGPAAIGFAKRCGIDASQLEQ--RDTPKGPCVFATVLTA 121 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +L+ ++P I + + MRW T + RP++ ++ + + ++ Sbjct: 122 GRDGVSLLRDLIPTWIDALQGRRFMRWGTGTQ-----RFSRPIRWLVALHGDDVIDVEM- 175 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + HR H P+ + S D Y++ L++A VL+D + R I + A Sbjct: 176 PGADPVVQSDRFSRSHRLHGDQPLCIASADQYVKTLQQAGVLVDRDERSRLIRASIDQGA 235 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT---- 292 A E L EE++ LVE ++ G +++L LP E+I ++ +Q+ Sbjct: 236 EAANGEANCPDRLFEELVDLVEGPRILQGQIAEQFLHLPPEVISTVMQAHQRYVPLQIPG 295 Query: 293 -------RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 T E VL F+LV+N A I++GN RV+ ARL DA F + D+ Sbjct: 296 LTPDPLRLTAEAVLRPEFLLVANGL-EQASALIIRGNERVLGARLADAEFFLEVDRRQAS 354 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 + V F IG+ +R RI L ++ + Sbjct: 355 ATRRDA----------------------LSRVTFAEGIGSLRDRCDRIERLTDQLLTDLG 392 Query: 406 ADVALV---DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 ++ RA L K DL +++V EFPELQG +G +Y + + E+ A+ EH PR Sbjct: 393 LSDSVATASRRAAHLCKHDLVSQMVGEFPELQGLMGGKYLLEEGESRDVALAVVEHYLPR 452 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 G +++P+ V+LA++ + L++ +A E+P+GS DPYALRRA G++ I+ Sbjct: 453 GAGDDLPSTDAGAVVALAERFELLLSIYAKGERPTGSSDPYALRRAGNGVLLILWNQGWK 512 Query: 523 IPLSQFIEDQ--------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 + L+ F+ +L R+ L D DL++A+ Sbjct: 513 LDLNGFLAKAVEAWKELFPAFAVDTAQLVGDLSALLRQRITSQLEDDGYAADLVQAVAGD 572 Query: 563 END------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--I 614 + L + I+ L + +R ++ + + +S + Sbjct: 573 TVSTTRLLWDPLDVRVRIQMLRGLRDQGRLTAVQAVVQRASRLAEKGDLPSGVLSSSDVV 632 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVN 671 P +E+ L+ Y Q+ D+L +E FFD V+V Sbjct: 633 DPALFESASEQGLFDATQRL----NPLAASGAYQQLCDVLVESTPALEAFFDGDQSVMVM 688 Query: 672 VDDREVRDNRLSLLQYIKNIILIVINVQKI 701 DD +R NRL+LL ++N + + I Sbjct: 689 ADDPALRTNRLNLLGVLRNQAAVFAQFELI 718 >gi|89100474|ref|ZP_01173336.1| glycyl-tRNA synthetase beta subunit [Bacillus sp. NRRL B-14911] gi|89084817|gb|EAR63956.1| glycyl-tRNA synthetase beta subunit [Bacillus sp. NRRL B-14911] Length = 690 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 199/734 (27%), Positives = 346/734 (47%), Gaps = 78/734 (10%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR + L+ + L+E+ V + + + TP RL + +K Sbjct: 1 MAKRDLLLEIGLEEMPARFVTDSINQLASKVEKWLEEKKVPHGGISAFSTPRRLAVLVKD 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 +S + EE GP G KA GF R G+ I G Y Sbjct: 61 VSETQEDIHEEAKGPARKIAQNEAGEWSKAAIGFSRGQGMDVDD---IYFKEINGIEYAH 117 Query: 112 VLR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 V + +L + + + +PK+MRW+ ++RP+K I+ + + Sbjct: 118 VNKFIKGAETASILPE-LKDITESLTFPKNMRWADRD-----MRYVRPIKWIMALFGQD- 170 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I ++ +P N T GHRF +++ Y + L VL++ E R++ I + Sbjct: 171 ----VIPFEIAGVPASNWTLGHRFLGEK-VELTEPAEYEKSLLGQFVLVNAEERKSGIRS 225 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 RLA + D+DLLEE+ LVE+ G F++++L +PEE++ ++K +Q+ F Sbjct: 226 QIERLAEENNWVIPVDEDLLEEVTNLVEYPTALFGKFEEEFLEIPEEVLITSMKEHQRYF 285 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++ EG L F+ V N + + +GN +V+ ARL DA F++ DQ + Sbjct: 286 PVKSAEGKLLPYFVTVRNGD-HNHLEQVAKGNEKVLRARLADAAFFYQEDQKMDIESALQ 344 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DAD 407 + +V+H +IGT E+V R+R L ++A+ + + Sbjct: 345 ----------------------KLGSIVYHEEIGTLAEKVERVRKLANELAESLSLNPEE 382 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 VDRA +SK DL +++V EFPELQG +G++YA + E+ + AI EH PR ++ Sbjct: 383 KKTVDRAAEISKFDLVSQMVYEFPELQGFMGEKYAAQKGEDAAVAKAINEHYMPRNAEDS 442 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 P + +++A+KLDT+ +F+AI PSGS+DPYALRR GI++I+ + L + Sbjct: 443 APESNEGAVLAVAEKLDTISSFFAIGMIPSGSQDPYALRRQAAGIVQILAVKGWKLELEE 502 Query: 528 FIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 I+ L+ FF R+K L +R IR+D+I+A+L + ++ Sbjct: 503 VIKKSLALVKESGVGKKEEEQVYDELLSFFKLRIKHTLQERSIRYDIIDAVLSGKIGSMA 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 +++ + LN ++ + + R+ I + E + + E LY Sbjct: 563 SLIKRAEVLNAHKGEDGFKESMEALSRVLNIASKA-----EHPAAVDQGLFENKEETELY 617 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + I ++ + Y+ + L S+ I +F+ +V D+ +++NRLS++ I Sbjct: 618 SRFLEVSAKIGNGVEEEEYYML---LVSMRPEIGAYFENTMVMADNTALKENRLSMMAEI 674 Query: 689 KNIILIVINVQKIV 702 ++I V +IV Sbjct: 675 ASLIQAFAKVNEIV 688 >gi|296445406|ref|ZP_06887364.1| glycyl-tRNA synthetase, beta subunit [Methylosinus trichosporium OB3b] gi|296257167|gb|EFH04236.1| glycyl-tRNA synthetase, beta subunit [Methylosinus trichosporium OB3b] Length = 778 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 262/541 (48%), Positives = 356/541 (65%), Gaps = 22/541 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA+DL ++ G L E G+ Y+ + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRQAADDLQRLVCGALAERGLAYEGAASHATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EE+ GPRVGA + AI GFL+S GL +I + +I+KDPKKG+ Y+AV+ + R Sbjct: 61 ARQPDVREEKKGPRVGAPEAAIAGFLKSAGLASIDEAKIEKDPKKGEFYVAVIERAGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 VL ++P ++ PWPKSMRW + + + W+RPL+SIL E +++ + Sbjct: 121 IQVLADVLPGVVKGFPWPKSMRWGAASAKLDSLRWVRPLQSILATFGPETETPEVVRFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN+ +GHRF AP V+ D Y LE+A V+LD RR+ +L+DA LA A G Sbjct: 181 DGIESGNVAFGHRFMAPQGFSVRRFDDYAPALEKAKVVLDAARRRDIVLHDARTLAMAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED LLEE+ GLVEW MG+FD+ +L +P E+IR TI+ NQKCFV + +G LA Sbjct: 241 LELVEDAALLEEVAGLVEWPVTLMGAFDESFLSIPPEVIRATIRVNQKCFVLKRADGGLA 300 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILV+N++A+DGGA IV GN RV+AARL DA F++ D Sbjct: 301 NKFILVANVEANDGGATIVGGNQRVIAARLSDAKFFYETD-------------------- 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L L++R+ +LD ++VFH K+GTQGERV+RI L +++A LI AD +RA L+KA Sbjct: 341 LKTKLEERLPKLD--NIVFHEKLGTQGERVARIAALARELAPLIGADADKAERAARLAKA 398 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL TE+V EFPELQG +G+ YA Q E+ A+E+H KP+GP + +PTN +SI V+LA Sbjct: 399 DLVTEMVGEFPELQGLMGRYYARAQGEDADVAAALEDHYKPQGPNDRIPTNPVSIAVALA 458 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRI LE+++ +PL ++F Sbjct: 459 DKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIALESELRLPLRDAFAAAQATIWFDA 518 Query: 541 R 541 R Sbjct: 519 R 519 Score = 144 bits (364), Expect = 4e-32, Method: Composition-based stats. Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 14/158 (8%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAIL------------RPENDNLLTIVDLIKHLNEF 580 +L+ FF DRLK+YL DR R+DLI+A L D+LLTI ++ L +F Sbjct: 595 DLLAFFIDRLKVYLRDRGARYDLIDAALGASASAQVREGSAKMPDDLLTITRKVEALAKF 654 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI--SPQYLLLEAEKRLYAVISDFGTHI 638 + G+ L +R IL IEEKK+ + + P + + E +L A + Sbjct: 655 LDTDDGKNLLAGFRRAANILKIEEKKDGAGAYDTPHHPNLRMEQPEHKLAAAVKRAREET 714 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 E ++ + + L + EP++ FFDQV VN +D + Sbjct: 715 AERLEAENFEGAMRALAKLREPVDAFFDQVTVNCEDEK 752 >gi|46446327|ref|YP_007692.1| glycyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] gi|46399968|emb|CAF23417.1| probable glycyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] Length = 1017 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 208/735 (28%), Positives = 355/735 (48%), Gaps = 77/735 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF++EI S+E+PA ++L + LL++EG+ ++ + Y TP R+ +Y+ LS Sbjct: 318 DFVIEIGSQELPASFVSIGGQNLERAIRALLEKEGISFERIVVYGTPRRIAVYIYQLSKG 377 Query: 63 SPEKIEERLGPRVGAGKK-------AIDGFLRSTGLQTI--------SDCQIKKDPKKG- 106 P + E+ GP V + A +GF RS G+ T +I+ P KG Sbjct: 378 KPSQTIEKKGPPVEQAYQVDGTIKVAGEGFFRSLGMTTPTLAAIQNHEISEIEIRPIKGI 437 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 + +++ R +L +P+ I + +PK MRW+ ++ RPL+ +L + Sbjct: 438 NYLFGSVKQEGRATTSILAEKLPLLIGSLDFPKKMRWADLE-----ITYARPLEWVLALF 492 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 + II + + ITYGHR +P I + +Y++ L + V+ DP R Sbjct: 493 GKD-----IIPFAIGNLFSDRITYGHRQLSPQAIHLDHAKNYLKSLHQHSVMADPNEREE 547 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 +IL L ++++E ++ +++ LVEW + + +F +++L +P+E++ + + Sbjct: 548 SILEQLSNLEKQEQIQIIEKNRVIPQVLNLVEWPYLTISTFREEFLKVPKEVLISEMVEH 607 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F G L N F++ +NI + I QGN +V++ARL D + ++ D Sbjct: 608 QKYFPVTDSNGTLKNLFVITANIIPT---EQIKQGNQKVLSARLSDGVFLYEED------ 658 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 L PL +L V F ++GT ++V RI K + L+ Sbjct: 659 --------------LKVPLASFNEKLK--KVTFQKELGTVYQKVERIIQHAKVLQILLGI 702 Query: 407 D-VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 LV+RA +LSKADL + +V EFPELQG IG+ YA+ E AI+EH PRG Sbjct: 703 STPILVERAALLSKADLASNMVYEFPELQGTIGRYYALANREEAEIAQAIDEHWMPRGEN 762 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +P + +SLADKLD LI ++I KP+ S DPYALRR LG+I+++++ + + L Sbjct: 763 APLPETETGTIISLADKLDNLIGCFSIGLKPTSSSDPYALRRQVLGVIKMLIKGQYSLHL 822 Query: 526 SQFIED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + +E Q+++ F +R+K D D IEA L ++ Sbjct: 823 EECLEKCISHFPTHIVKDKKQMTQDILSFITNRIKTVFQDYGFHKDEIEASLANGCQDIY 882 Query: 569 TIVDLIKHLNEFFS--SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 +K L+ F +++ KR L + N IS + L AE+ Sbjct: 883 DTFCRVKALHNFRQGSASQFHSLYEVYKRAKGQLNGYQTSN------ISAELLKEPAEQN 936 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY+++ E++ K Y+Q L+ ++ + + F+QV + D+ ++RDNRL+LL+ Sbjct: 937 LYSLLDRQQKAFAEAIKKKDYNQAYALIATMQPALAVLFEQVKILADEPQIRDNRLALLK 996 Query: 687 YIKNIILIVINVQKI 701 + N +++ KI Sbjct: 997 QVFNFFEEMLDFSKI 1011 >gi|327459311|gb|EGF05657.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1] gi|327472736|gb|EGF18163.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK408] Length = 679 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 210/725 (28%), Positives = 343/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEVGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVIASTLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L + + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHDVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 HAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FFH R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFHARVEKMM-DRSIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + I+P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAINPALFENQEEKDLAAAIESVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + + Sbjct: 619 -------TSDLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKVGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 KFNQI 676 >gi|327399084|ref|YP_004339953.1| glycyl-tRNA synthetase subunit beta [Hippea maritima DSM 10411] gi|327181713|gb|AEA33894.1| Glycyl-tRNA synthetase beta subunit [Hippea maritima DSM 10411] Length = 670 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 208/713 (29%), Positives = 355/713 (49%), Gaps = 66/713 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L E+++EE+P +D +L ++ + + N+ Y TP R+ L + Sbjct: 3 LLFELFTEELPTSEMEHLEKDFLEASKKILSDKNIEFNNLIFYLTPRRMALKFE-FDEFV 61 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + ++ LGP G KA++GFL+ +++ KKG+ +++ Sbjct: 62 KVEDKKVLGPPKSVCFKDGKPTKALEGFLKKNNATMDD--IVEEKTKKGEYIAVIIKGKN 119 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ + ++ + + K MRW F + RP+ ++ + +I+D Sbjct: 120 VQAKPIVIQAIDQILKDIHFNKQMRWGDGE-----FEFTRPVHGVVFL-----IDNEIVD 169 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + K N TYGHRF + +V+ D+Y L+E V+++ RR ILN A+ Sbjct: 170 FEFKGKKASNTTYGHRFLSSGSFRVEY-DNYESTLKENFVIVNQNERRQLILNQLKEYAN 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G +LV D++LL E++ LVE+ + +G F++K+L LP+E++ ++K +Q+ F T++G Sbjct: 229 KKGAKLVYDEELLNEVVNLVEYPVMVIGRFEEKFLKLPKEVLITSMKDHQRYFA-FTKDG 287 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F +SNI+ D I +G RV+ AR DA F++ D+ Sbjct: 288 KLLNEFAAISNIKT-DNMDLIREGYERVLRARFSDAEFFFEEDK---------------- 330 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 L++ + +L + +FH K+G+Q +R +R+ L + +A+ + D RA L Sbjct: 331 ----KHKLEEFVPKLSQM--MFHEKLGSQLDRTNRLVGLAEFLAEKLGFDTNKAKRAAYL 384 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SKADL T++V EFPELQG +G+EYA+L +E+ AI E P+ + +P I + Sbjct: 385 SKADLLTQMVYEFPELQGVMGREYALLSSEDSEVATAIYEQYLPK--EDEIPRGGAGICL 442 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------ 531 S+ADKLD ++ + KP+G+KDPY LRRA LGIIR ++EN + + L + +E Sbjct: 443 SIADKLDIIVGGFFAGLKPTGAKDPYGLRRAALGIIRTLIENGLFLNLREVLEKSAQLYN 502 Query: 532 -----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + FF R K Y D HD++EA + + D++ +K LNEF S K Sbjct: 503 KTIELYEIEEFFAVRFKNYFSDY--PHDVLEA-ITFKFDDIYDAYLRLKALNEFVESDKN 559 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 ++ + KR+F IL E + + E+ L+ + E + K Sbjct: 560 KEKQFAIKRVFNILKEFE------GSRVDESLFNQDEERALFDKVKQLEEVEAEFISKKD 613 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + + + S + I+ FFD V+V D +VR+NRLSLL ++ I+L + N + Sbjct: 614 YLGLLNQITSNKDVIDNFFDSVMVMDKDEKVRNNRLSLLNKLRKIVLNIANFK 666 >gi|319651590|ref|ZP_08005717.1| glycyl-tRNA synthetase beta subunit [Bacillus sp. 2_A_57_CT2] gi|317396657|gb|EFV77368.1| glycyl-tRNA synthetase beta subunit [Bacillus sp. 2_A_57_CT2] Length = 690 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 196/730 (26%), Positives = 346/730 (47%), Gaps = 74/730 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D LLEI EE+PAR + LS + L E+ + + + + +P RL + + G+ Sbjct: 4 KDLLLEIGLEEMPARFVTNSMNQLSDKVNSWLLEKKISFDEISAFSSPRRLAVLVTGVDT 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + EE GP G KA GF R G K+ + Sbjct: 64 AQEDINEEAKGPAKKIALTEDGEWSKAAVGFSRGQGASVED--IFFKEINGVEYAHVSKF 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L + + + +PK+MRW+ +IRP+K ++ + + Sbjct: 122 IKGKETAALLPE-LQQIVTSLSFPKNMRWANQE-----LRFIRPIKWLMALF-----GNE 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I + + N+T GHRF I++ + Y + L V+ +P+ R++AIL+ + Sbjct: 171 VIPFAITNVHTSNLTRGHRFLG-EEIEINNPSDYEKSLLAQYVITNPQERKSAILSQLQK 229 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + D+DLLEE+ LVE+ G F+++YL LPEE++ ++K +Q+ F ++ Sbjct: 230 IEEENDWVIPVDEDLLEEVNNLVEYPTALYGQFEEEYLELPEEVLITSMKEHQRYFPVKS 289 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L F+ V N + + + +GN +V+ ARL DA F++ DQ Sbjct: 290 KEGRLLPYFVTVRNG-SHEHLEKVAKGNEKVLRARLSDAAFFYREDQ------------- 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALV 411 + + +L ++V+H +IGT E+V R+R L +++ + A+ Sbjct: 336 -------KTDIAASLEKLK--NIVYHEEIGTLAEKVERVRQLAANLSENLHFSDEAKAVT 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA +SK DL + +V EFPELQG +G++YA+ + E + AI EH PR + P + Sbjct: 387 DRAAEISKFDLVSHMVYEFPELQGFMGEKYALQKGEKEAVARAINEHYMPRNAEDQTPAS 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S+A+KLDT+++ +AI PSGS+DPYALRR G+I+ +L D+ L + I Sbjct: 447 DAGAVLSIAEKLDTIVSSFAIGIIPSGSQDPYALRRQATGVIQTLLAKNWDLKLEELIAL 506 Query: 531 ------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 Q L+ FF R+K L ++ +R+DLIEA+L E ++ ++V Sbjct: 507 SSETVLNSKIGKKSKGELMQELVSFFKLRIKYMLQEKTVRYDLIEAVLGSEIGSVPSLVK 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L +A ++ + + R+ I + E K +I EK L+ Sbjct: 567 RAEVLESHKDAAGFKESIEALSRVINIASKAEDK-----GDIDSSLFENVYEKSLFNKYL 621 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 +++ + + +LL S+ I+ +F+ +V + +E+R NRL + + ++I Sbjct: 622 SVNEELRKEVAEE---AAFNLLISLKPEIDQYFEHTMVMDEKQEIRSNRLHQMANLADLI 678 Query: 693 LIVINVQKIV 702 N+ +I+ Sbjct: 679 KKFANMNEII 688 >gi|322386853|ref|ZP_08060477.1| glycyl-tRNA synthetase beta subunit [Streptococcus cristatus ATCC 51100] gi|321269135|gb|EFX52071.1| glycyl-tRNA synthetase beta subunit [Streptococcus cristatus ATCC 51100] Length = 679 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 207/725 (28%), Positives = 341/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DL+ +I G + GHRF ++ S D Y DL V+ P R I+ Sbjct: 169 QAFDLEFLDIKSGRTSRGHRFLGRET-EIASADSYEDDLWAQFVITSPLEREKMIIEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEQEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L + FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLSHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++ I+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVHILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYENQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++ + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNSALFENQEEKDLAAAIEKVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TPDLAANLDQLFALSPAIDAFFDHTMVMAEDEAVRNNRLALLSSLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|113477880|ref|YP_723941.1| glycyl-tRNA synthetase subunit beta [Trichodesmium erythraeum IMS101] gi|122964408|sp|Q10WA6|SYGB_TRIEI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|110168928|gb|ABG53468.1| Glycine--tRNA ligase [Trichodesmium erythraeum IMS101] Length = 719 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 206/745 (27%), Positives = 343/745 (46%), Gaps = 76/745 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FLLEI +EE+PA ++A + ++ LKE + ++ Y TP RL + + L Sbjct: 4 TFLLEIGTEELPANFVYEAIQQWQELIPMTLKEAFLTNDSVNVYATPRRLAVVIDALPTK 63 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ EE GP G KA +GF + G+Q +KGD + Sbjct: 64 QPDREEEIKGPPAKAAFKDGKPTKAAEGFSKKQGVQLNDLQIC--TTEKGDFVFVNKKIQ 121 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L ++P I K+ + MRW+ + RP++ ++ +L E + Sbjct: 122 GKPTAAILTELIPKWIDKLEGKRFMRWADGE-----LKFPRPIRWLVALLDDEIL-PINL 175 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D ++I +YGHR P I++ +Y+ L++A + +D + R++ I A Sbjct: 176 DNGSQKITSDRFSYGHRVLHPKLIEISQAKNYVEVLKKAYIEVDYKQRKSKIEQQIKTAA 235 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR--- 293 + + ++LL E+ LVEW V +G FD+++L LP E+ ++T+Q+ F Sbjct: 236 EEIKGKAEISEELLAEVTNLVEWPTVVIGKFDEEFLILPGEVTTTVMETHQRYFPVFKST 295 Query: 294 --TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++ L FI +SN + I GN RV+ ARL D F+K D Sbjct: 296 KTFKDMELLPYFITISNGDP-EKSEIIAIGNERVIKARLADGQFFYKTD----------- 343 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DV 408 L+KPL+ + L+ V F AK+G+ E+V RI + K IA + + Sbjct: 344 ---------LAKPLESYLPELET--VTFQAKLGSMREKVKRIVSIAKLIAGQLQITQEES 392 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 ++RA +L KADL T++V EFPELQG +G++YA E + AI EH PRG + + Sbjct: 393 KNIERAALLCKADLVTQMVYEFPELQGVMGEKYARAAGETEAVATAIFEHYLPRGAGDIL 452 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P +SLAD+LDTL++ + + P+GS DP+ALRRA G++ I + + L Q Sbjct: 453 PKTISGQVISLADRLDTLVSIFGLGMLPTGSADPFALRRAANGVVNISWSANLPLNLHQL 512 Query: 529 IED-----------------QNLILFFHDRLK-LYLHDRDIRHDLIEAILRPEN------ 564 +E+ L F R+K + L +++I +DL+ A+L + Sbjct: 513 LEEIATNFFKTYSQTNSDLLAQLSNFLLQRIKTILLEEKNIDYDLVNAVLGDNDAEYKER 572 Query: 565 --DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE--KKNREISLEISPQYLL 620 +LL + + L + K + R ++ A E K + I + Sbjct: 573 GLKDLLDVRNRAIFLQNIRQNGMLGKIYETINRSTRLAAQGELDKIQLKPLKVIDSKLFK 632 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREV 677 E+E Y + + + S + Y Q+ D L I + FF D VLV D ++ Sbjct: 633 SESELAFYNALVELVPQTEISQKTRNYQQLVDALLKIAPTVSNFFDGPDSVLVIDPDPKI 692 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 + NRL+LL ++N ++ + +IV Sbjct: 693 KKNRLNLLGLLRNNARVLADFGQIV 717 >gi|328950890|ref|YP_004368225.1| glycyl-tRNA synthetase, beta subunit [Marinithermus hydrothermalis DSM 14884] gi|328451214|gb|AEB12115.1| glycyl-tRNA synthetase, beta subunit [Marinithermus hydrothermalis DSM 14884] Length = 698 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 205/736 (27%), Positives = 335/736 (45%), Gaps = 88/736 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EE+PA + E L L + Y+ + Y TP RL L + GL+ H Sbjct: 2 DLLFEIGTEELPAWYVTEGLEALKKRTAERLLAARLEYEELTGYATPRRLALVVTGLAAH 61 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 EER GP G KA +GF R G++ ++D A + Sbjct: 62 QARLEEERRGPPARVAFQDGKPTKAAEGFARKNGVRVED--LYERDG----YVYARVVDE 115 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +VL ++ +++P PK MRW P +IRP++ ++ +L E ++ Sbjct: 116 GRPAREVLPKLLAEVARELPAPKPMRWGHGEGP-----FIRPVRWLVALLDGE-----VL 165 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 L++ + G T GHRF P + +Q Y+ L EA V++DPE RR I+ +A LA Sbjct: 166 PLEVFGVRAGRETRGHRFLHPGLLALQDAASYVTALHEARVVVDPEVRRERIITEAATLA 225 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 A GLE+V KDLLEE+ GLVEW MG FD++YL LP+E++ + +Q+ F R ++ Sbjct: 226 LAEGLEVVLPKDLLEEVTGLVEWPVGVMGRFDERYLELPDEVLAEVMIVHQRFFPVRGKD 285 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L N FI ++N D + +G V+ RL DAL FW+ D Sbjct: 286 GRLTNRFIGIANHLP-DHLETVRRGYEGVLEGRLADALFFWRAD---------------- 328 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 L PL + ARL + FH +GT ++ R+R + + + + AD+ ++ A Sbjct: 329 ----LKTPLAEHRARLK--GINFHKGLGTMWDKTERVRRAAEALGEAVGADLGVLREAAG 382 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L +ADL T++V EFPEL+G + + YA Q + A+EE ++P+G +P + Sbjct: 383 LLRADLGTQMVYEFPELEGIMARAYAERQGVDPRVARALEEAVRPQGGSGALPESTEGAL 442 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 +S+ DK DTL+ F+ + + PSGS DP+ LRR +G++R++ D+PL + +E Sbjct: 443 LSVLDKADTLVGFFQLGKTPSGSADPFGLRRVAVGLVRVLGAMGWDLPLGKVLEAAAESY 502 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F +RL+ L + + + A + ++ + + + Sbjct: 503 RAWGLEVEEAALRTAEGFVLERLEGLLVEAGLPVLAVRA--AEVAPTVYGVMLRARLVAQ 560 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + L KR + + P E LYAV+ + Sbjct: 561 LAGEPEFAGLQLLYKRAANLAREASGVH-----APDPALFQTPEEAALYAVLPRVEAGVA 615 Query: 640 ESMDHKR-------------------YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 ++ + ++ + ++ F D VLV VDD VR+N Sbjct: 616 RLLELGTELMPPWDPAAPLPRVGLEPLAAPLREVVALKDALDRFLDNVLVMVDDPAVREN 675 Query: 681 RLSLLQYIKNIILIVI 696 RL+LL+ +++ + + Sbjct: 676 RLALLRRVRDAVRRLG 691 >gi|328945067|gb|EGG39223.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1087] Length = 679 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 210/725 (28%), Positives = 346/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + G L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGGFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DL+ +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 EAFDLNFLDIKSGRTSRGHRFLG-KETEIASADSYEDDLRAQFVIASPLERGDMIVEQIQ 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L+ +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLN--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAVAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLATNLDQLFALSPIIDAFFDHTMVMAEDETVRNNRLALLTSLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|284107196|ref|ZP_06386337.1| Glycyl-tRNA synthetase beta subunit [Candidatus Poribacteria sp. WGA-A3] gi|283829943|gb|EFC34222.1| Glycyl-tRNA synthetase beta subunit [Candidatus Poribacteria sp. WGA-A3] Length = 698 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 195/732 (26%), Positives = 327/732 (44%), Gaps = 86/732 (11%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV- 75 M A L ++ G L + + + +R + TP R+ + + GL+ ++E LGP Sbjct: 1 MVQPAMTQLGELIDGFLADHRLSHDQIRTFGTPRRVAVLVTGLAAKQTPAVQEALGPSKS 60 Query: 76 ------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVP 129 G KA GF +S G+ ++ KG AV R+ VL +P Sbjct: 61 VAFDAQGHPTKAAQGFAKSQGVDVGELET--RETPKGVYLCAVKREKGLPASQVLTEHLP 118 Query: 130 VAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNIT 189 +Q++ +PK+MRW+ S + RP++ + + + + D + G + Sbjct: 119 GLLQQLTFPKTMRWNA-----SGIRYPRPIRWLAAV-----VGSRPLSFDFAGVRSGGHS 168 Query: 190 YGHRFHAPHP-------IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 +GHRF + I+++ + Y L V +DP RR A+ +LA +V Sbjct: 169 WGHRFLSGGKAGAASRGIRIRRPELYEAALARGGVTVDPARRREALAGQLKQLARSVKGR 228 Query: 243 LVE--DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 + + ++LL++ + +E V GSFD+ YL +P+E++ +++ +Q F R+G L Sbjct: 229 VYQANHEELLDQAVFSLECPNVVCGSFDRMYLAVPQEVLIASMEEHQGFFSVVNRKGELF 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F +N++ + I GN RV+AARL DA +F+ D+ Sbjct: 289 PRFFAPTNMELRNM-ELIRVGNERVLAARLADARYFFDEDR------------------- 328 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL--VDRAIVLS 418 L R+ L VVFH ++G+ E+ R L +A RA LS Sbjct: 329 -KVKLADRVQEL--HGVVFHKRLGSLYEKTQRTIDLVGALADAAGIPEVKESCQRAAFLS 385 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T +V EFP LQG +G+ YA E++ C AI E+ +PR P + +P I ++ Sbjct: 386 KADLVTGMVGEFPTLQGVMGEHYAAHDGESVEVCQAIGEYYRPRTPDDAIPETTIGRLLA 445 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI--- 535 LAD+L+TL F+ PSGS+DP+ LRR G+IRI++E ++I L+ + + Sbjct: 446 LADRLETLAAFFYAGMVPSGSEDPFGLRRGAFGVIRIVIEAGLNINLADILSKAERLIVE 505 Query: 536 ----------------------LFFHDRLKLYLHD-RDIRHDLIEAILRPEND---NLLT 569 F +RL+ Y R D+++++L + +L Sbjct: 506 QGVKAGGHPSASLRAGSGPPPRKFLEERLRYYGRTVAGYREDVMDSVLARADGADCDLRD 565 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + L S E ++ KR +I+ E + + L E+ L+ Sbjct: 566 LFLRMDALQAITSQQDFESLIVGFKRAHRIVEKE----GWTARTVEASLLTHPTEQTLHQ 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + S+D YH L + PI+ FFD VLVN + EVR NRLSLL+ + Sbjct: 622 AMDTATRGVGHSLDVHDYHGALKYLIGLKSPIDEFFDGVLVNAPEPEVRANRLSLLRQVD 681 Query: 690 NIILIVINVQKI 701 ++ ++ +I Sbjct: 682 DLFATFGDLSQI 693 >gi|325688749|gb|EGD30758.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK115] Length = 679 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 208/725 (28%), Positives = 344/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGVFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVITSPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L + G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEAEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 E L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAESKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRGIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + +++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TDVNPALFENQEEKDLAAAIEKVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D ++ I+ FFD +V +D VR+NRL+LL + + + Sbjct: 619 -------TSDLAANLDQFFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTSKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 KFNQI 676 >gi|325290522|ref|YP_004266703.1| glycyl-tRNA synthetase beta chain [Syntrophobotulus glycolicus DSM 8271] gi|324965923|gb|ADY56702.1| glycyl-tRNA synthetase beta chain [Syntrophobotulus glycolicus DSM 8271] Length = 690 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 194/732 (26%), Positives = 323/732 (44%), Gaps = 72/732 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FLLEI EE+PA+ L L E ++ + ++ Y TP RL L L GL Sbjct: 1 MAKNFLLEIGMEEMPAKFAPGVLSQLENNARKKLDELRIVCKEIKGYGTPRRLALLLSGL 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G+ KA+ GF R G++ ++ A Sbjct: 61 ADRQEDVCEEVKGPAQKAAYDSEGSPTKAVQGFARGQGVRLED--LFVQEWNGVPYVYAR 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 I ++L I + +PK MRW + RP++ + + Sbjct: 119 KTLKGEEIINILPQFCLDMITGLSFPKPMRWGDHE-----VRFARPIRWLAALC-----D 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I+ + G ++ GHR I + +Y+ DLE VL D E R+ I Sbjct: 169 KEIVPFRYAGLQSGRLSRGHRTLGN-SIVLSQASNYLEDLENVFVLGDQEKRKRVIWEQV 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+AVG + ED+ LL EI LVE+ +G D Y+ +PEE+I +K +Q+ F Sbjct: 228 VSLAAAVGGYVEEDEGLLSEITHLVEYPTALIGEVDLNYMMMPEEVIITPMKEHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R++EG L FI V N ++ + GN +V+ ARLEDA +++ D Sbjct: 288 RSKEGKLLPYFITVRNGDST-ALDKVKDGNKKVLKARLEDAAFYYRED------------ 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L PL+ + A+L+ V++H K+GT +RV RI L +A+ + + Sbjct: 335 --------LKVPLEVQGAKLE--KVIYHDKLGTVAQRVERIVELSGIVAEKMALSTEEKE 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 LV R L+KADL T +V +FPELQG +G YA E+ I+EH PR +++P Sbjct: 385 LVKRTARLAKADLVTHMVYDFPELQGIMGAYYAKSNGESPEVVCGIKEHYLPRFTGDSLP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + VS+ADKLD ++ + +P+GS+DPYALRR LG++ ++ E++ ++ L I Sbjct: 445 VSYTGRAVSIADKLDAIVGAFGCGIQPTGSQDPYALRRQALGVVSMLKEDRHNLSLRDLI 504 Query: 530 EDQN-------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + L FF RL+ + +R+D +EA++ ++ Sbjct: 505 KASDEIFAGQGLALESFTKIQPLLEDFFAQRLRFIFQEEGLRYDTVEAVMAQGCAFPYSV 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L+ ++ + R + + I L E L + Sbjct: 565 EKKARVLSRKREEEGFTSYVNAYVRCVNLSKKTDGGEWSIDD------LADRFELELASQ 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + + +++ + I IE FD V++ V++ +R RL LL Sbjct: 619 LFETVPQVAQAVQENDFELAYQKAAKIVPHIEKLFDSVMIMVEEENLRRARLGLLGQCVE 678 Query: 691 IILIVINVQKIV 702 ++ + + +V Sbjct: 679 VLSCLGELSVLV 690 >gi|146319418|ref|YP_001199130.1| glycyl-tRNA synthetase subunit beta [Streptococcus suis 05ZYH33] gi|146321622|ref|YP_001201333.1| glycyl-tRNA synthetase subunit beta [Streptococcus suis 98HAH33] gi|253752441|ref|YP_003025582.1| glycyl-tRNA synthetase beta chain [Streptococcus suis SC84] gi|253754267|ref|YP_003027408.1| glycyl-tRNA synthetase beta chain [Streptococcus suis P1/7] gi|253756201|ref|YP_003029341.1| glycyl-tRNA synthetase beta chain [Streptococcus suis BM407] gi|229558582|sp|A4W3J4|SYGB_STRS2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229558584|sp|A4VX91|SYGB_STRSY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145690224|gb|ABP90730.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus suis 05ZYH33] gi|145692428|gb|ABP92933.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus suis 98HAH33] gi|251816730|emb|CAZ52372.1| glycyl-tRNA synthetase beta chain [Streptococcus suis SC84] gi|251818665|emb|CAZ56500.1| glycyl-tRNA synthetase beta chain [Streptococcus suis BM407] gi|251820513|emb|CAR47268.1| glycyl-tRNA synthetase beta chain [Streptococcus suis P1/7] gi|292559046|gb|ADE32047.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus suis GZ1] gi|319758845|gb|ADV70787.1| glycyl-tRNA synthetase subunit beta [Streptococcus suis JS14] Length = 678 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 213/725 (29%), Positives = 344/725 (47%), Gaps = 77/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EEIPA + A L + L + + + ++ + TP RL + ++GL+ Sbjct: 3 KNLLVELGLEEIPAYIVTPAMHQLRDRMATFLTDNRLAFDSIDVFSTPRRLAVRVRGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E+ GP G KA +GF+R GL T I+ KG+ Y+ V Sbjct: 63 QQTDLTEDFKGPAKKIALDADGNFTKAAEGFVRGKGLTTAD---IEFREIKGEEYVYVTK 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + + VL +P ++ + +P SM W++ F++IRP+ ++ +L + Sbjct: 120 HEAGQPAKTVLAG-IPEVLKAMTFPVSMNWASNK-----FAYIRPVHTLTVLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + +D+D +I G I+ GHRF ++ S D Y DL V+ DP R+N I+ Sbjct: 169 EALDMDFLDITSGRISRGHRFLGNET-EIASADSYEADLRAQFVITDPAERQNMIVEQIK 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + + + D+DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 AIEDKHNVTVEIDEDLLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI V N +++GN +V+ ARLED FW+ DQ Sbjct: 288 DKAGKLLPNFISVRNG-NDQYLDNVIKGNEKVLVARLEDGEFFWREDQKL---------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVAL 410 + + RL + V FH KIG+ E + R +V+ +K+A L + A Sbjct: 337 ----------KIADLVERLKV--VTFHEKIGSLYEHMERTKVIAEKLADLAGLSAGEKAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA + K DL T +V EF ELQG +G++YA+L E + AI EH P +P Sbjct: 385 VARAADIYKFDLLTGMVGEFDELQGIMGEKYALLAGEKPAVAAAIREHYLPNSAEGELPE 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +K+ ++LADK DTL++F+++ PSGS DPYALRRAT GI+RI+ +IPL Q I Sbjct: 445 SKVGAVLALADKFDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWEIPLDQLIA 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F R++ + D+ I D+ EA+L + + Sbjct: 505 ELYSLNFASLTYDNQPAVMDFIRARVEKMM-DKTIPKDIREAVLASSTFVVRLQLAASSA 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + + A ++ + + R+F + E I + EK L A ++ Sbjct: 564 IFQKAKEADYKEAVENLSRVFNLAEKAE------VTAIDEALFENDQEKALAAAVAGLEL 617 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + D L ++ I FFD +V VDD V+ NRL+LL+ + + V Sbjct: 618 -------TEDMAGNLDKLFALSPVIAAFFDNTMVMVDDATVKANRLALLKALADKASAVA 670 Query: 697 NVQKI 701 + Sbjct: 671 VFNLL 675 >gi|308234593|ref|ZP_07665330.1| glycyl-tRNA synthetase, beta subunit [Atopobium vaginae DSM 15829] gi|328944350|ref|ZP_08241814.1| glycyl-tRNA synthetase beta subunit [Atopobium vaginae DSM 15829] gi|327491269|gb|EGF23044.1| glycyl-tRNA synthetase beta subunit [Atopobium vaginae DSM 15829] Length = 698 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 197/737 (26%), Positives = 338/737 (45%), Gaps = 79/737 (10%) Query: 1 MP---DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M +FLLEI +EE+P+ A + L ++ L++ G+ + ++ + +P RL + + Sbjct: 1 MSKSCEFLLEIGTEEMPSAPLIHATKQLVQLMQAHLQKSGLTFGSVEAHQSPRRLAVLVH 60 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 L+ +PE E + GP KA GF + G+ + + K + Sbjct: 61 DLAAQTPEINEIKRGPAASIAFDANKQPTKAALGFAKKCGVDAHDLIEKTAEDGK-NYVF 119 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVA 168 A R +++L + + + WP +S RW+ S++RP++ ++ +L Sbjct: 120 AQKFIAARTAQELLGDMCHDIVASLEWPNYRSQRWA-----FETESFVRPVRWLVALL-- 172 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E++I + T GHR + +Y L +A VLL+ E R+ + Sbjct: 173 ---DEEVIPFSYAGVSSSCTTQGHRVLGHGSHTIDCPGNYRSILRDAGVLLEDERRQKIL 229 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A + L + K EE+I L E+ +V +GSFD+++L +P E+I ++ TNQ+ Sbjct: 230 DEVAAFEHTHPQLHVDMPKKTFEEVINLCEYPRVLIGSFDQEFLDVPHEIICESMLTNQR 289 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F T++G L F++VSN AS AI+ GN RVV ARL+DA F++ D Sbjct: 290 YFPIYTKDGELTRDFVIVSNGAAS-ADKAIIDGNERVVRARLDDAKFFFEED-------- 340 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD- 407 L PLD+ + RL VVF K+G+ ++ +R+ L A+L+ AD Sbjct: 341 ------------LKHPLDEYVPRLS--KVVFQEKLGSVLDKTNRMTKLILVCAELLKADD 386 Query: 408 --VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 L +RA L+KADL T V EF QG +G YA E+ C AI +H +PR Sbjct: 387 ELTKLCERAAYLAKADLVTNAVVEFTSQQGVMGGYYARAMGEDPRVCKAIAQHYRPRFSK 446 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL-------- 517 + P + + V+L DKLDT+ +AINE P+GS DP+A RR+ LGII I+ Sbjct: 447 DVTPDDFVGKLVALVDKLDTICGMFAINEPPTGSSDPFAQRRSALGIIAILQELPSCSLK 506 Query: 518 -----------ENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 E +D + + FF RL+ ++ + + I AI + Sbjct: 507 SLIDAALNLFKEQGLDFDVPAVSAC--VCEFFSVRLQALAKEQSVSAESISAIAAIGIID 564 Query: 567 LLTIVDLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 ++ + + E ++ R + + + +++ L AE Sbjct: 565 PREFFARVQAFDSARTREPQLFEDLAIAFARASHLT------DASLGTDVNVSIL-TPAE 617 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 ++L+ S+ ++++++ + Y + L + EPI+ FF+ V + DD E+R+NR L Sbjct: 618 QQLFTACSNGRDNVEKALSNGEYARALASLAELREPIDQFFNDVRIMDDDTEIRNNRFRL 677 Query: 685 LQYIKNIILIVINVQKI 701 L ++ V ++ + Sbjct: 678 LNTFTSVFSKVADIAAL 694 >gi|294787911|ref|ZP_06753155.1| glycyl-tRNA synthetase, beta subunit [Simonsiella muelleri ATCC 29453] gi|294484204|gb|EFG31887.1| glycyl-tRNA synthetase, beta subunit [Simonsiella muelleri ATCC 29453] Length = 680 Score = 518 bits (1335), Expect = e-144, Method: Composition-based stats. Identities = 204/669 (30%), Positives = 337/669 (50%), Gaps = 56/669 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + ++ + ++ + Sbjct: 15 PPKALNNLGNHFAQSIAEGLEKAQLIDGETQFTAYASPRRLAVQVQNVKAEQADQHIVKK 74 Query: 72 GPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVA 131 GP V A +KAI+GF RS G++ S I + K DVY + + + D+L IV A Sbjct: 75 GPAVTANEKAIEGFARSCGVEKGSLKII--NDGKQDVYAHEFTQTGQKLADLLGDIVNAA 132 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 ++K+P PK MRW + S +++RP+ ++ + A+ ++ + + + + T G Sbjct: 133 VKKLPIPKVMRWGS-----STHTFVRPVHGLVVMHGAD-----VLPVSVLGLASRHFTLG 182 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 HRF + +K D Y + L E V+ R+NAI + A+++ + D+ LL Sbjct: 183 HRFLSQGEVKFIQADDYAKQLAEQGKVIASFAERKNAIQAALNEQANSLNATVAADESLL 242 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQ 310 +E+ LVE+ V +F++ +L +P+E + LT++ NQK F + G L N F+LVSN+Q Sbjct: 243 DEVTALVEYPVVLQAAFEEHFLAVPQECLILTMQQNQKYFPLLDKNGKLMNRFLLVSNLQ 302 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 +D + I+ GN RV+ ARL DA F+K+DQ L+ R+ Sbjct: 303 TND-PSHIISGNERVLRARLSDAEFFYKQDQ--------------------KATLESRLP 341 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 +L VV+H KIG+Q ERV R++ + IA + AD A +RA L+KADL TE+V EF Sbjct: 342 KLQ--SVVYHNKIGSQAERVERLQTIAAHIAGYLKADKAAAERAARLAKADLVTEMVGEF 399 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +GK YA L E AIE+H +PR + +P N+I V+LADKL+TL+ W Sbjct: 400 PELQGTMGKYYAQLDGEQPEIALAIEQHYQPRFAGDALPENRIGTAVALADKLETLVGIW 459 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDI-------------PLSQFIEDQNLILF 537 I P+G KDPYALRR+ LG++R+++ + + I L + F Sbjct: 460 GIGLIPTGDKDPYALRRSALGVLRMLMNDSLSINELLTFVFDSFPKDLLSENTVSEVADF 519 Query: 538 FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 RL + L D D++ A+L D L + ++ + +F + + KR+ Sbjct: 520 MQARLAVLLQ-NDYPQDVVAAVLAQRPDRLNDLQAKLQAVKQFKQLPESVALAAANKRVQ 578 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 +L KK+ + E++P L + EK L+A + +Q ++ + + L +I Sbjct: 579 NLL----KKSDDALGEVNPSLLAQDEEKALFAAVQALQPKVQTALSTQNFQAALSELATI 634 Query: 658 CEPIEIFFD 666 ++ FFD Sbjct: 635 KPQVDAFFD 643 >gi|319956464|ref|YP_004167727.1| glycyl-tRNA synthetase beta chain [Nitratifractor salsuginis DSM 16511] gi|319418868|gb|ADV45978.1| glycyl-tRNA synthetase beta chain [Nitratifractor salsuginis DSM 16511] Length = 684 Score = 518 bits (1335), Expect = e-144, Method: Composition-based stats. Identities = 189/719 (26%), Positives = 332/719 (46%), Gaps = 55/719 (7%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L+EI EE+PA K + + +L+E + + +TP RL L Sbjct: 1 MSTQPLLIEIGVEELPALPLLKILDRIEASWKKVLQEHQLS-SDFSFDYTPRRLVLRHNA 59 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +++EE +GP V G A +GF R G+ + K +V Sbjct: 60 IPLAQEDRVEELVGPPVEIAIKEGKPTPAGEGFARKCGVAFEQLDRTHK--GNREVLYYR 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P D+L ++ + + + K MRW H +IRP++ + L E Sbjct: 118 REVPGSQTRDLLPEMIREWVASMNFGKMMRWGDRHD-----EFIRPVRWLQVRLGQE--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + +L + G T+ HR + P++V + L++ V L + RR +IL D Sbjct: 170 --SVPAELFGVASGTRTFVHRMVSFDPVEVPDPAKFEEILQKGEVTLRADERRRSILEDF 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + + GL++ D LL+E++ + E + +G+FD+K+L LP E+I ++K +Q+ F Sbjct: 228 DTIEAESGLKIERDGALLDEVVAITEHPKALLGTFDEKFLELPPEVIMTSMKEHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L+N F++VSN + + GN RV+ RLEDAL F++ D ++ L++ Sbjct: 288 FDGEGRLSNHFVVVSNAVTENYSQV-IAGNERVLRPRLEDALFFYRNDLKRGLSIEGLEK 346 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 +D L ++ R + + + E+ + A I+ L+D Sbjct: 347 IQF---IDGLGTLKDKVDRERNIALRLAGIYMDKLEQE------TGRSALEIEE---LMD 394 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA+ L+KADL TE+V EF ELQG +G YA E+ C AI+E +P G +P+ Sbjct: 395 RAVTLAKADLLTEMVYEFTELQGLMGYYYAKALGEDPLVCTAIKEQYRPEGEGAELPSTI 454 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 S +++A KLDTL+ +++ + P+GSKDP+ALRRA GIIRI+ + + + +E Sbjct: 455 FSSILAMAIKLDTLLGLFSVGKIPTGSKDPFALRRAVNGIIRIVTRYDLSFDIPKMMELL 514 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 ++ L F +R+ +I A+L ++ I + L Sbjct: 515 ADQYAPFDEEKLESFILERI---YKSLKANPSIIAAVLATGERDVNEIAKKVAALRAILE 571 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + + KR+ I A + + + LE+ P+ E E++L+ Sbjct: 572 QEGARELFTTFKRVANISA---EVDLDGVLEVDPELFEAEEERKLWEAFRRTRER----- 623 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ Y + L ++ ++ FFD VLVN ++ ++R NR +++ I L + ++++I Sbjct: 624 EYGDYQEELQALFALKPLLDAFFDSVLVNAEEEKLRLNRQAMVASIYKTFLNIADLKEI 682 >gi|295398005|ref|ZP_06808061.1| glycyl-tRNA synthetase beta subunit [Aerococcus viridans ATCC 11563] gi|294973763|gb|EFG49534.1| glycyl-tRNA synthetase beta subunit [Aerococcus viridans ATCC 11563] Length = 692 Score = 518 bits (1334), Expect = e-144, Method: Composition-based stats. Identities = 196/733 (26%), Positives = 336/733 (45%), Gaps = 76/733 (10%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M FL EI EE+PA+ A L ++ L + + + N+ + TP RL + + G Sbjct: 1 MSQHTFLFEIGLEEVPAQYVRNAVNQLKSLVENFLSDNRLTFDNVETFATPRRLTVRVNG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ + E GP G KA GF R G ++ K + Sbjct: 61 LADKQTDFSEVAKGPAKRIAQDEEGNWTKAAQGFARGKGASVED--IYFEEVKGEEYVFI 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +P D+L+ +V I ++ +P SM W++ +IRP+ ++ +L Sbjct: 119 NISQPGSQAADILQDVV-SVIDQMSFPVSMHWASYD-----VKYIRPIHWMVALL----- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ L + NI+ GHR+ + + + Y L + V++ + R+ I Sbjct: 168 DDQVLPLTFLNLTASNISRGHRYLGSQEVVIVDANAYEAALADEFVIVKQDERKALIEQQ 227 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LAS ++ D DLLEE+ +VE+ F+G+FD KYL LP+E++ ++K +Q+ F Sbjct: 228 IEQLASENKYQIDIDADLLEEVTQIVEYPTAFIGNFDDKYLALPDEVLITSMKNHQRYFY 287 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + + G L F+ V N A + + +GN +V+ ARLED F D+ Sbjct: 288 VKDQAGKLLPLFLAVRNGNA-EHLDNVRKGNQKVLTARLEDGFFFVNEDKT--------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-----DA 406 K + RL V FHA+IG+ E+++R + K +A+ D Sbjct: 338 -----------KTIQDFQDRL--AKVTFHAEIGSLQEKMARTGQIAKYLAEKWSGQLADV 384 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + R + K DL T IV EF ELQG +G++YA+ E + AI EH P Sbjct: 385 QTGDITRTGEIYKFDLMTGIVDEFSELQGIMGEKYALAFGEAPAVATAIREHYMPISAEG 444 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P +++ +++DKLD++I+F+ I+ PSGS DP+ALRR T GI+RI++EN++ Sbjct: 445 ELPASQLGKLFAVSDKLDSVISFFNIDRIPSGSNDPFALRRQTSGIVRILIENELTFDWK 504 Query: 527 Q------------------FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L F +DRLK L+D++IR+D+ +A+L+ + ++L Sbjct: 505 TDIISILQTVYGIEDQERLVELQTALSQFVNDRLKAILNDQEIRYDIADAVLQSHSADVL 564 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + K L A ++ L + RI + A + N + + I ++E L+ Sbjct: 565 RKLAASKVLQAASEKASFKETLEAWNRILNLGAKARELNVQ-DVTIEESRFESDSEVALF 623 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + L ++ I FFD +V +D+ V++NRL++L I Sbjct: 624 NAAKGLE-------MTNDMQNNYNQLEALTPVITEFFDNNMVFAEDQTVQNNRLAILSMI 676 Query: 689 KNIILIVINVQKI 701 IL + + +I Sbjct: 677 AQAILTLADTNRI 689 >gi|327467244|gb|EGF12748.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK330] Length = 679 Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 208/725 (28%), Positives = 341/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLG-KETEISSADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ F+ R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFIVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+ Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAHLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQDTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + I+ + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAINSALFENQEEKDLAAAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|325686948|gb|EGD28972.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK72] Length = 679 Score = 517 bits (1332), Expect = e-144, Method: Composition-based stats. Identities = 208/725 (28%), Positives = 343/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I G+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTV---EYITFREINGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLG-KETEISSADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDSKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DGEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L +V FH KIG+ E + R + +A+ D Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHIERTGKIAALLAKEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYGLKFDSLSYENQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + I+ + EK LYA I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAINSALFENQEEKDLYAAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FF+ +V +D+ VR+NRL+LL + + Sbjct: 619 -------TSDLAANLDQLFALSPVIDAFFEHTMVMAEDKAVRNNRLALLSSLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|223934266|ref|ZP_03626194.1| glycyl-tRNA synthetase, beta subunit [Streptococcus suis 89/1591] gi|302024384|ref|ZP_07249595.1| glycyl-tRNA synthetase subunit beta [Streptococcus suis 05HAS68] gi|330833382|ref|YP_004402207.1| glycyl-tRNA synthetase beta chain [Streptococcus suis ST3] gi|223897065|gb|EEF63498.1| glycyl-tRNA synthetase, beta subunit [Streptococcus suis 89/1591] gi|329307605|gb|AEB82021.1| glycyl-tRNA synthetase beta chain [Streptococcus suis ST3] Length = 678 Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats. Identities = 212/725 (29%), Positives = 344/725 (47%), Gaps = 77/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EEIPA + + L + L + + + ++ + TP RL + ++GL+ Sbjct: 3 KNLLVELGLEEIPAYIVTPSMHQLRDRMATFLTDNRLAFDSIDVFSTPRRLAVRVRGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-L 113 + E+ GP G KA +GF+R GL T I+ KG+ Y+ V Sbjct: 63 QQTDLTEDFKGPAKKIALDADGNFTKAAEGFVRGKGLTTAD---IEFREIKGEEYVYVTK 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + + VL +P ++ + +P SM W++ F++IRP+ ++ +L + Sbjct: 120 HEAGQPAKAVLAG-IPEVLKAMTFPVSMNWASNK-----FAYIRPVHTLTVLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + +D+D +I G I+ GHRF ++ S D Y DL V+ DP R+N I+ Sbjct: 169 EALDMDFLDITSGRISRGHRFLGNET-EIASADSYEADLRAQFVITDPAERQNMIVEQIK 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + + + D+DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 AIEDKHNVTVEIDEDLLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI V N +++GN +V+ ARLED FW+ DQ Sbjct: 288 DKAGKLLPNFISVRNG-NDQYLDNVIKGNEKVLVARLEDGEFFWREDQKL---------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVAL 410 + + RL + V FH KIG+ E + R +V+ +K+A L + A Sbjct: 337 ----------KIADLVERLKV--VTFHEKIGSLYEHMERTKVIAEKLADLAGLSAGEKAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA + K DL T +V EF ELQG +G++YA+L E + AI EH P +P Sbjct: 385 VARAADIYKFDLLTGMVGEFDELQGIMGEKYALLAGEKPAVAAAIREHYLPNSAEGELPE 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +K+ ++LADK DTL++F+++ PSGS DPYALRRAT GI+RI+ +IPL Q I Sbjct: 445 SKVGAVLALADKFDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWEIPLDQLIA 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F R++ + D+ I D+ EA+L + + Sbjct: 505 ELYSLNFASLTYDNQPAVMDFIRARVEKMM-DKTIPKDIREAVLASSTFVVRLQLAASSA 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + + A ++ + + R+F + E I + EK L A ++ Sbjct: 564 IFQKAKEADYKEAVENLSRVFNLAEKAE------VTAIDEALFENDQEKALAAAVAGLEL 617 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + D L ++ I FFD +V VDD V+ NRL+LL+ + + V Sbjct: 618 -------TEDMAGNLDKLFALSPVIAAFFDNTMVMVDDAAVKANRLTLLKALADKASAVA 670 Query: 697 NVQKI 701 + Sbjct: 671 VFNLL 675 >gi|227431616|ref|ZP_03913652.1| glycine--tRNA ligase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352608|gb|EEJ42798.1| glycine--tRNA ligase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 685 Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats. Identities = 201/730 (27%), Positives = 335/730 (45%), Gaps = 75/730 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + + Y TP RL + L ++ Sbjct: 1 MSTFLLEIGLEEVPAHLVTSSENQLIERTRNFLAEHRLTVGAINPYSTPRRLAVELTDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G + + G Sbjct: 61 EESESLSEEKRGPSIERAKDANGEWTKAATGFARGQGATPDD-----FETRDG-YVWLTK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +D+L I + ++ + M+W+ +AF ++RP++ ++ + + Sbjct: 115 HTEGVPAKDILVKIGAEVVSEMKFSTYMKWAN-----NAFLYVRPIRWLVALF-----DK 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++D + ++ G +T GHRF + +++ S D Y+ LE A V+++ E R+NAI + Sbjct: 165 EVVDFHVLDVQTGRVTRGHRFLSNEHVEISSADDYVSTLESASVVVNAEVRKNAIRSQLT 224 Query: 234 RLASAVGLELVEDKD----LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A L D D LLEE+ +VE F G+FDKKYL +P+E++ +++ +Q+ Sbjct: 225 AIAKQNNWSLELDTDAAQNLLEEVNNIVELPTAFAGTFDKKYLEIPDEVLITSMREHQRF 284 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +G L F+ V N + ++ GN +V+ ARLEDA F+K DQ Sbjct: 285 FFVTNHDGKLLPHFLSVRNG-NQEHLDNVIAGNEKVLVARLEDAEFFYKEDQT------- 336 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K + M ++ +VFH KIGT E + R VL + +AQ ++ D Sbjct: 337 -------------KTIADYMEKVK--KLVFHEKIGTVYEHMQRTGVLAQALAQSLNFDEQ 381 Query: 410 L---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V RA + K DL T +V EF ELQG +G+ YA L EN + AI+EH P Sbjct: 382 QLSNVSRAAEIYKFDLMTGMVGEFDELQGIMGEHYAKLFGENPAVAAAIKEHYMPTSATG 441 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 + + I +++ADKLD ++ F+A + PSGS DPY LRRA GI+R + E I L Sbjct: 442 KIAESDIGAVLAVADKLDAIVTFFAADLTPSGSNDPYGLRRAATGIVRTLQEKNWHIALK 501 Query: 527 QF-------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIVD 572 + ++ F DR++ D +R DL+ A + R N +++ ++D Sbjct: 502 PVLTQFAQSQGEVAAADITAVLEFILDRVRKLTLDDGVRQDLVSAGVSRSGNTDVVYLID 561 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 I L + S R+ ++ + + + P +AEK LY Sbjct: 562 RINVLAAHSKDNDFRDVIESLTRVDRLAVKQLTND-----SVDPSLFENDAEKELYQATY 616 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + ++ L + PI +F+ +VN ++ V++NR + L I +I Sbjct: 617 AL--NLSHLVKEGA-DEVYTTLAGLQSPISTYFEATMVNTENAAVKNNRYAQLNVIHRLI 673 Query: 693 LIVINVQKIV 702 + ++++IV Sbjct: 674 SELGDLEQIV 683 >gi|187477217|ref|YP_785241.1| glycyl-tRNA synthetase beta chain [Bordetella avium 197N] gi|115421803|emb|CAJ48314.1| glycyl-tRNA synthetase beta chain [Bordetella avium 197N] Length = 711 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 186/727 (25%), Positives = 331/727 (45%), Gaps = 74/727 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKI-EER 70 P + ++ E + + L+ G++ + Y TP RL ++L + +P++ E+ Sbjct: 18 PPKALNRLGESFAEGVRATLQSLGLLADGCQVTAYATPRRLAVHLSAVLAQAPDQAYAEK 77 Query: 71 LGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 L P G A+ L + GL+ + ++++ K D +A P + Sbjct: 78 LMPAKIGLTEDGKATPALAKKLAAKGLEHLDPATLERESDGKQDYLIARGTAPGAQLAAG 137 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + AI +P PK MR+ S ++RP ++ + A+ I+ + + + Sbjct: 138 LQEGLEKAIDGLPIPKVMRYQLADGQTS-VKFVRPAHRLVALHGAD-----IVPVSVLGL 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 G T GHRF + + + D Y L +A V+ E RR I + A + L Sbjct: 192 EAGRATLGHRFMSEGDVLIAQADAYEATLAQAQVVASFEKRRAEIESQLLAEAGKLAGTL 251 Query: 244 VEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE-GVL 299 +D LL+E+ LVE V++G F++++L +P+E + LT++ NQK F ++ G L Sbjct: 252 GDDPAVAALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTMRLNQKYFPLFDQQTGKL 311 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 + F++VSN++ + I++GN RVV RL DA F++ D+ Sbjct: 312 THRFLIVSNMRTA-NPVNIIEGNQRVVRPRLADAQFFFETDR------------------ 352 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 PL R+ L ++V+H K+GTQ ERV R+R + + +AQ + +VA DRA +L+K Sbjct: 353 --KVPLAARVEPLG--NIVYHNKLGTQLERVERVRAIARGVAQALGGNVAASDRAALLAK 408 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G YA E +A+ + R ++T+ L Sbjct: 409 ADLSSNMVGEFPELQGIMGAYYAAGDGEPAEVVEALRSQYRNRYDSPVTADTLTAVTLFL 468 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGII---RIILENKI-------DIPLSQF- 528 A++ +TL WAI P+G +DP+ LRRA LG+I + + L+ Sbjct: 469 AERAETLTGIWAIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKISEDGPLSLNGLL 528 Query: 529 --------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + F ++R + L R + ++A++ + L + + + Sbjct: 529 TLAEASFPAGKVPASTLPEVRAFIYERYRNQLIGEHDR-NAVDAVIALDP-PLHQVAERV 586 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + + F + + KRI +L E + E+ P L AE +L + I Sbjct: 587 RAVTAFGQMPEAASLAAANKRIGNLLKKAEGE----IGEVDPARLTDAAEIKLASAIEQL 642 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 G + + + L EP++ FF V+V +D +R NRL+LL+ + ++ Sbjct: 643 GPQAEAQLAAGDFAANLRTLAQAREPVDAFFADVMVMAEDPALRANRLALLKQLHGLMNQ 702 Query: 695 VINVQKI 701 V ++ ++ Sbjct: 703 VADISRL 709 >gi|262282187|ref|ZP_06059956.1| glycyl-tRNA synthetase subunit beta [Streptococcus sp. 2_1_36FAA] gi|262262641|gb|EEY81338.1| glycyl-tRNA synthetase subunit beta [Streptococcus sp. 2_1_36FAA] Length = 679 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 206/725 (28%), Positives = 339/725 (46%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ + F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 EAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 + + +L +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLG--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADEAAD 384 Query: 414 AIV---LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLVS 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR+I D++ A+L+ + +V+ Sbjct: 505 RLYELEFDSLSYDNQEAVLDFFRARVEKMM-DRNIPKDIVTAVLQSTQFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLATAIEKVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLATNLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLSSLTAKAGQMA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|319778496|ref|YP_004129409.1| Glycyl-tRNA synthetase beta chain [Taylorella equigenitalis MCE9] gi|317108520|gb|ADU91266.1| Glycyl-tRNA synthetase beta chain [Taylorella equigenitalis MCE9] Length = 706 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 217/740 (29%), Positives = 368/740 (49%), Gaps = 75/740 (10%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV------IYQNMRQYWTPHRL 52 M + L+E+++EE+P + +E + ++ L + + ++ + TP RL Sbjct: 1 MSNQSLLIELFTEELPPKALRNLSEVFASEIVKGLVKINLLEGDSESHEKYTVFATPRRL 60 Query: 53 FLYLKGLSPHSPEKI-EERLGPRV------GAGKKAIDGFLRSTGLQ--TISDCQIKKDP 103 + ++ + PE+ E+L P+ G A+ L S G+ +SD Q+K D Sbjct: 61 AVLVRDVLDVGPEQPFTEKLMPKKVGLDSEGNATAALTKKLESKGMGNFAVSDLQVKSD- 119 Query: 104 KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSIL 163 K D R ++ L+ I A+ +P PK MR+ S ++RP+ ++ Sbjct: 120 GKQDYLYLSGINAGRSLKADLQAIFQHAVDSLPIPKVMRYQLADGKTS-VKFVRPVHGLV 178 Query: 164 CILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPE 222 + +E +ID+ I N+T+GHRF + +V S D Y + L+E MV+ Sbjct: 179 AMHGSE-----VIDISAFGINSSNVTHGHRFMGKYSFEVSSADSYEKQLLDEGMVVASYS 233 Query: 223 CRRNAILNDAHRLASAVGLE---LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELI 279 R N I + ++S +GL E +L+EE+ LVE+ ++++G F++K+L +P E + Sbjct: 234 ERMNYISSKLESISSELGLNLGSGDEVNNLIEEVTSLVEYPEIYVGEFEEKFLQVPSECL 293 Query: 280 RLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 LT++ NQK F +G L+N F++VSN++ S + I++GN RVV RL DA F++ Sbjct: 294 ILTMRLNQKYFPLFNPDGSLSNKFLIVSNMKVS-NPSNIIEGNQRVVRPRLADAEFFYET 352 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ +Q + L VV+H KIG+Q ERV RI + K Sbjct: 353 DKKL--------------------SFEQMLEPLKT--VVYHNKIGSQFERVERIEKIAKF 390 Query: 400 IAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 +A + AD +L RA +LSKADL + +V EFPELQG +G Y+ LQ E DAI++ Sbjct: 391 LASKLGADESLASRAALLSKADLSSNMVGEFPELQGIMGSYYSKLQGEPEEIYDAIKDQY 450 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL-- 517 K + E + S+ + LAD+++TLI W I P+G +DPY LRRA LG+I I Sbjct: 451 KLKFDREYSNKSVTSLALYLADRIETLIGIWGIGSAPTGERDPYGLRRAALGLISAIESL 510 Query: 518 ---ENKIDIPLSQFIEDQ-------------NLILFFHDRLKLYLHDRDIRHDLIEAILR 561 EN+ + LS+ + + +F +DRLK L+ L++++L Sbjct: 511 SGSENENSLNLSEILHFAQTLFSDIPKSTAIEVEVFIYDRLKNQLY-NTYSKQLVDSVL- 568 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 ++ +V IK L++F +++ + KRI IL K N ++ I Sbjct: 569 TNKTHINDVVPRIKALSDFSKTSEASSLATANKRISNILK---KINYQLP-AIDKTLFKA 624 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 EAEK LY ++ K Y+++ L ++ + ++ FF+ V+V +D +R+NR Sbjct: 625 EAEKNLYESYVQIKDELKSKFTSKNYNEVFLKLSTLRDSVDKFFEDVMVMDEDIAIRNNR 684 Query: 682 LSLLQYIKNIILIVINVQKI 701 L+LL+ + + +V ++ + Sbjct: 685 LALLKELHEHMNLVADISLL 704 >gi|255541030|ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative [Ricinus communis] gi|223548759|gb|EEF50248.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative [Ricinus communis] Length = 1069 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 175/720 (24%), Positives = 342/720 (47%), Gaps = 67/720 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F+LEI +EE+P + A++ L +++ LL+++ + + ++ + TP RL + ++ LS Sbjct: 388 FVLEIGTEEMPPQDVVHASQQLKDLVVQLLEKQRLRHGEVQAFGTPRRLVVCVESLSAKQ 447 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 PE E GP V G KA +GF R + D +K K + A + + Sbjct: 448 PEIEVEVRGPPVSKAFDEQGNPTKAAEGFCRRYNIPL--DSLFRKADGKTEYIYARVTEA 505 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 RL ++L +PVAI ++ +PK+MRW+ S + RP++ I+ + + ++ Sbjct: 506 ARLALEILSKDLPVAISRISFPKTMRWN------SQVMFSRPIRWIMAL-----HGDLVV 554 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + GNI+YG R ++V++ + Y + A + ++ E R+ +IL ++ LA Sbjct: 555 PFIYAGVLSGNISYGLRNTPSATVEVENAESYASIMRNAGIHIEIEERKRSILEHSNALA 614 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +V ++ ++LL E++ LVE +G F + +L LP++L+ + ++ +QK F Sbjct: 615 KSVNGHIIIQENLLNEVVNLVEAPFPVLGKFKESFLELPKDLLTMVMQKHQKYFAVTDET 674 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+N ++ + +GN V+ AR EDA F++ D Sbjct: 675 GKLLPYFIAVANGAINEM--VVRKGNEAVLRARYEDAKFFYEMDTR-------------- 718 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDR 413 K + ++L ++FH K+GT ++++RI + K++ L+ L V Sbjct: 719 ------KKFSEFRSQLK--GILFHEKLGTMLDKMTRIENMVTKLSALLGIREDLLQTVQD 770 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+ +DL T +V EF L G + + YA+ + +A+ + PR + +P + Sbjct: 771 AASLAMSDLATAVVTEFTSLSGIMARHYALRDGYSEQVAEALLDITLPRFSGDVLPKTDV 830 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------- 526 I +++AD+LD+LI +A +PS + DP+ LRR + G+++I++E + ++ L+ Sbjct: 831 GILLAVADRLDSLIGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKERNLDLAHALRLAA 890 Query: 527 -------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F RL+ YL D++I +++ ++L + Sbjct: 891 DVQPIKVDAHLIDDAYQFVTRRLEQYLVDKEISPEIVRSVLAERATLPCLAARTAYKMET 950 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + + R +I+ K+ +E+ E+ L+++ + I Sbjct: 951 LSRGNLFPEVIEAYSRPTRIVR---GKDVVSDIEVDEAAFETAEERALWSIFLSTKSKIF 1007 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + ++ L P+E FF+ V V V+D +R NRL+LL+ I ++ + ++ Sbjct: 1008 PDIEVDEFVEVSSELLQ---PLEDFFNNVFVMVEDERIRKNRLALLKKIADLPRGIADLS 1064 >gi|304439785|ref|ZP_07399683.1| glycyl-tRNA synthetase beta subunit [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371772|gb|EFM25380.1| glycyl-tRNA synthetase beta subunit [Peptoniphilus duerdenii ATCC BAA-1640] Length = 688 Score = 515 bits (1327), Expect = e-143, Method: Composition-based stats. Identities = 214/728 (29%), Positives = 359/728 (49%), Gaps = 72/728 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 ++LLEI EE+PAR A + L++ + Y+++R Y TP RL L++ G+ Sbjct: 2 NYLLEIGMEELPARYVDLALIQIRDKADKFLRDNLIDYKDIRTYATPRRLTLFIDGIEEF 61 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G K ++GFL+S L+ KD K + + K Sbjct: 62 QRDIDEEVKGPAKKIAFDEDGNPTKPLEGFLKSKNLKLEDIEI--KDLKGTEYVYGQVHK 119 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 E++LK +P I+ + +PK+M+W + RP++ ++ +L +E + Sbjct: 120 KGEKSEEILKVEIPSLIKGITFPKNMKWG-----GKNLKFARPIRWVVSMLDSE-----V 169 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ + IP G++T GHRF I++ +D+Y + LEE V+LD + R I +A + Sbjct: 170 VEFPFEGIPVGSVTRGHRFLGSSHIEIDHVDNYEKLLEENYVILDQKKRLEIIKINAKKE 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A+G E+ EDKDLL+E+ + E+ G+ ++YL LP E+I ++ + + Sbjct: 230 AKALGGEIKEDKDLLDELTYINEYPTPITGNVKEEYLELPAEVITTPMRDHLRYIPVYNE 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + +GN +V+ ARLEDA F+ D Sbjct: 290 DGDLLPYFITVRNG-TDYKKEVVSKGNEKVLGARLEDAKFFYNED--------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVALVD 412 + L+ L ++F K+GT ++ RI L ++I + + D + + Sbjct: 334 -----IKTKLEDLNENLK--GLMFQDKLGTMYDKSLRIDKLSREIGEKLEVADESLVDLK 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSKADL T++V EF ELQG IG Y+ LQ E AI E PR + +P Sbjct: 387 RAAELSKADLTTKMVTEFTELQGTIGSIYSKLQGEKPLVSQAIFEQYLPRFAGDELPETT 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 I ++LADK+DT++ +AI P+GS+DP+ALRR ++G+I I+ + D+ LS ++ Sbjct: 447 IGSILALADKIDTIVGLFAIGLIPTGSQDPFALRRLSIGVINILKDKNWDLSLSDIVDHA 506 Query: 532 ------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ +F R+K L D +IR+D+I+ ++ + + TI Sbjct: 507 LYTYVQENNLTFNYEEVKEKILDYFRARIKNILEDMNIRYDIIQGVIASDGTVIETIDKA 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 IK LNEFF + + R+ + E+ E++ + +EK LY Sbjct: 567 IK-LNEFFK-EDRTELTDALTRVHNLATKYEE------GEVAEERFEDPSEKELYNRFES 618 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ ++ K+Y + L+ + I+ FFD +V VDD VR+NRL+LL I +++ Sbjct: 619 IRPDVETLINDKKYEEALLALNPLVPFIDKFFDSCMVLVDDENVRNNRLALLHLIDSLVE 678 Query: 694 IVINVQKI 701 V+N++ I Sbjct: 679 RVVNIESI 686 >gi|171056906|ref|YP_001789255.1| glycyl-tRNA synthetase subunit beta [Leptothrix cholodnii SP-6] gi|238689122|sp|B1Y7P2|SYGB_LEPCP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|170774351|gb|ACB32490.1| glycyl-tRNA synthetase, beta subunit [Leptothrix cholodnii SP-6] Length = 713 Score = 515 bits (1326), Expect = e-143, Method: Composition-based stats. Identities = 204/740 (27%), Positives = 341/740 (46%), Gaps = 72/740 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 P+ L+E++ EE+P + K E + L LK G+ + + + +P RL +++ G+ Sbjct: 4 PNLLVELFVEELPPKALKKLGESFAGTLAASLKAGGLAGADAVVTPFASPRRLAVHVTGV 63 Query: 60 SPHSPEKIEE-RLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLA 111 + + +K +L P G A+ L + G +K+ P K + Sbjct: 64 AAKAADKSVLHKLMPVAVALDAAGNATPALLKKLAALGADASVVPSLKRQPDGKAEALFL 123 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + L+ + A+ K+P PK M + ++ +++RP ++ + Sbjct: 124 DSQVAGATLAEGLQKALDDALAKLPIPKVMGYQLADG-WTSVNFVRPAHGLVAL-----H 177 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLEEAM-VLLDPECRRNAIL 229 + ++ + + G T+GHRF A P ++++ D Y LE V+ E RR I+ Sbjct: 178 GDDVVPVATLGLVAGRSTHGHRFEAAVPTVELRHADSYAEQLETEGAVIAGFEARRAEIV 237 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A+A GL+ ++D LL+E+ LVE V + F+ ++L +P+E + LT+K NQK Sbjct: 238 RQLDAAAAAQGLKPIDDDALLDEVTALVERPNVLVCQFEPEFLAVPQECLILTMKANQKY 297 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L + F++VSNI+ D +A++ GN RVV RL DA F+ +D+ Sbjct: 298 FPLLDAAGKLTHKFLIVSNIRPDDA-SAVIGGNERVVRPRLADAKFFFDQDR-------- 348 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV- 408 K L+ R+ L VV+H K+GTQGER R+R +G I + Sbjct: 349 ------------KKTLESRVPGL--ARVVYHGKLGTQGERAERVRAIGHAIVNQLRMATI 394 Query: 409 --------------ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 + V +A +L+K DL T++V EFPELQG +G YA + A Sbjct: 395 PYTVDAQDEFAVLDSKVQQAALLAKTDLLTDMVGEFPELQGIMGGYYARHEGLRDGVAIA 454 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 IE+H KPR + +P N ++LADKL+TL+ + I + P+G +DP+ALRR LG+IR Sbjct: 455 IEDHYKPRFAGDALPRNHTGTVLALADKLETLVGLFGIGQLPTGDRDPFALRRHALGVIR 514 Query: 515 IILENKIDIPLSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 I++E + + L L F DRL + L D+ ++A+L Sbjct: 515 ILVEKNLPLDLPALLNGAVPAFGELIEDPRLALFDFMRDRLAVNLRDQGYSAQEVDAVLA 574 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 E L + + + F + + + KRI IL E + I L Sbjct: 575 LEPARLGDVPKRLAAVRAFAALPEAAALAAANKRIGNILKKAE---GTVEARIDAALLAE 631 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 AE++L A ++ Y L ++ P++ FFD V+VN +D +R NR Sbjct: 632 PAEQQLAAALAQVQPGADALFAQGEYAASLQALAALKAPVDAFFDDVMVNAEDPALRANR 691 Query: 682 LSLLQYIKNIILIVINVQKI 701 L LL + + V + ++ Sbjct: 692 LGLLATLHGAMNRVAELARL 711 >gi|94986743|ref|YP_594676.1| glycyl-tRNA synthetase, beta subunit [Lawsonia intracellularis PHE/MN1-00] gi|226737057|sp|Q1MRM1|SYGB_LAWIP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94730992|emb|CAJ54355.1| Glycyl-tRNA synthetase, beta subunit [Lawsonia intracellularis PHE/MN1-00] Length = 695 Score = 514 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 212/727 (29%), Positives = 337/727 (46%), Gaps = 64/727 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI +EE+PAR + +L + + L+ G + Y TP RL + +KGL Sbjct: 1 MATFILEIGTEELPARFLLELQSELGVRFLDSLQSMGYRPTEVSDYSTPRRLVVCIKGLD 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E +GP + G KA +GF ++ G+ S QI +G+ + Sbjct: 61 MIQPHCEEVVIGPPINIAFDKDGNPTKAAEGFAKNLGITIGSLSQI--STDRGEYISGLK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K ++VL + P I +P PK MRW + F++IRP++ I+ +L ++ Sbjct: 119 VKGGIPTKEVLARLCPEIITALPLPKRMRWGN-----NPFTFIRPIRWIMALLDSD---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDA 232 I+ +L I T G R + I+V S Y L+E V+LDP R+++IL Sbjct: 170 -IVPFELAGIHSNRNTVGLRNNNVPFIEVPSSTDYYMLLKEVGNVILDPNSRKDSILQLG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++ A +G + ++ LL E+IGLVE +G+ + +L LP E++ +I+T+QK F Sbjct: 229 NKEAQLIGGVVNWNERLLNEVIGLVEHPYPLLGTINSVFLNLPREVLLTSIETHQKSFGI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V N+ D A + QG RV+ ARLEDA FW D N+ Sbjct: 289 LDSQGNLLPYFLTVLNMTPPD-LALVKQGWERVLQARLEDARFFWNEDINS--------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALV 411 D+ +L ++F +G+ ++ R+ +L + IA+ I ++ Sbjct: 339 -----------SFDEWQEKL--THLIFLDPLGSIAQKEHRVSLLCEWIAKYIPTSNAEEA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +A LSK DL +++V EFPELQG +G YA + E+ S AI E P GP +VP Sbjct: 386 RKAGSLSKVDLVSKMVEEFPELQGVMGGIYARHKGESESIATAIAEQYLPSGPDTDVPVT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 + +S+ADK+DTL+ + P+G+ DPY LRR LGIIRI++E + I L Q Sbjct: 446 DLGAILSIADKIDTLVGCFGCGIIPTGTADPYGLRRCALGIIRILIEKEYPINLHQLYTR 505 Query: 532 QN------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L F RLK Y ++EAI+ + L +I D Sbjct: 506 AQDNFVNVSWKLAPEDVLQKLHEFIIARLKNYFLALGYDTLVVEAIVSTQTSQLWSIKDR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK-NREISLEISPQYLLLEAEKRLYAVIS 632 + + + + KR+ I+ ++K+ ++ +P AEK L + Sbjct: 566 LDSFILLSQHEDFSQLVQTIKRVINIIKKQDKETEIVLTGHWNPSLFKDTAEKVLAEKLM 625 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + LL + I FFDQV++ +D EVR NRL+LL+ + I Sbjct: 626 IAVNKFNQESQTASLPVFMMLL-KLQPAINTFFDQVMIMSNDIEVRRNRLNLLKALLLYI 684 Query: 693 LIVINVQ 699 + + Sbjct: 685 ESLADFS 691 >gi|139439748|ref|ZP_01773139.1| Hypothetical protein COLAER_02170 [Collinsella aerofaciens ATCC 25986] gi|133774898|gb|EBA38718.1| Hypothetical protein COLAER_02170 [Collinsella aerofaciens ATCC 25986] Length = 698 Score = 514 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 211/737 (28%), Positives = 321/737 (43%), Gaps = 79/737 (10%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M D FL EI +EE+P+ + A + L ++ L E G+ + +R +P RL + Sbjct: 1 MADAKDFLFEIGTEEMPSAPLNNAVKQLGTMIAKGLDEAGLAHGEVRVISSPRRLAALVA 60 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 ++ + E E + GP G KA GF R G+ D ++D + Sbjct: 61 NVATATDEVHEVKRGPAANIAFDADGNATKAAQGFARKCGVAA-EDLVRREDTDGREYVF 119 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVA 168 A P +L ++ I + WP +S RW H+ ++RP++ I C+L Sbjct: 120 AEKNIPSAPATPILTSLCEKTIAGLQWPNYRSQRWGHEHAT-----FVRPVRWICCLL-- 172 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E ++ + ++ GN T GHR P V S Y + LE+A V L E RR AI Sbjct: 173 ---GEDVVPVSFADVTSGNTTRGHRVLGPGDHVVASPAVYEQVLEDAGV-LSAERRREAI 228 Query: 229 LNDAHR-LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 L A+ G + K + EE+I L EW V +G+FD+++L +P E+I ++ TNQ Sbjct: 229 LAGIAEVEAARPGCHVDTPKKVFEEVINLCEWPTVLVGTFDEEFLKVPHEIICESMLTNQ 288 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F EG L F++VSN + + ++ GN RVV ARL+DA F++ D Sbjct: 289 RYFPIYDGEGKLTREFVVVSNSKP-ENAERVIDGNERVVRARLDDAKFFYEED------- 340 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG---KKIAQLI 404 L LD+ RL V F K+G+ + RI L + A L Sbjct: 341 -------------LKISLDEFRERL--AKVAFQEKLGSVLAKSERIEQLALAIAREAHLG 385 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 A RA L KADL + V EF QG +G YA+ EN AI +H +PR Sbjct: 386 AHLAADAARAAHLCKADLVSNAVVEFTSQQGVMGGYYAIAMGENDGVAHAIRDHYRPRFA 445 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P V+ ADKLDT+ +AI E P+GS DPYALRRA +GII I+ + + I Sbjct: 446 GDELPEGTAGCIVACADKLDTIAGIFAIGEPPTGSSDPYALRRAAIGIINILRDR-LPID 504 Query: 525 LSQFIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 + I+ Q + FFH RL D + D + A+ Sbjct: 505 PTSLIDFALELYSEQGIEFDAAEVAQQVRDFFHGRLVSMARDEKVPADTVAAVSAVHIIA 564 Query: 567 LLTIVDLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 L+E + + + R I E + S L+ E E Sbjct: 565 PSVFFARCAALDEARKNDAETFDNLATAYARAAHISKPELGVEYDRS-------LMGEVE 617 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L T + ++ + Y L ++ PI+ FFD+V+V D ++RDNRL L Sbjct: 618 LELADASEAAQTAVDAALAAEDYPAAFAALAALRAPIDRFFDEVMVMDKDEQLRDNRLKL 677 Query: 685 LQYIKNIILIVINVQKI 701 L + + + N+ ++ Sbjct: 678 LNRFEAVFSGIANIGEL 694 >gi|296877058|ref|ZP_06901099.1| glycyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 15912] gi|296431919|gb|EFH17725.1| glycyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 15912] Length = 678 Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats. Identities = 201/713 (28%), Positives = 339/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKPAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + VP + + +P SM W+ + F +IRP+ ++ +L + +DLD +I Sbjct: 132 S-VPELLASLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----GNEALDLDFLDIQS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLGHE-VEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGQLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEETAAVSRAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ +A+L N + +++ + L+E + + Sbjct: 517 DNQAEVLNFIKARVDKMMG--RTPKDIKDAVLAGSNFVVADMLEAAEALSEASKTDGYKA 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + + EK L I D S Sbjct: 575 AVESLSRAFNLAEKA-----DASVAVDASLFENDQEKALAKAIEDLELTGSASDK----- 624 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V +D V++NRL+LL + V ++ Sbjct: 625 --LAQLFALSPVIDAFFDNTMVMAEDEAVKNNRLALLAGLVAKANAVAAFNQL 675 >gi|297624434|ref|YP_003705868.1| glycyl-tRNA synthetase subunit beta [Truepera radiovictrix DSM 17093] gi|297165614|gb|ADI15325.1| glycyl-tRNA synthetase, beta subunit [Truepera radiovictrix DSM 17093] Length = 710 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 197/741 (26%), Positives = 331/741 (44%), Gaps = 86/741 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L EI +EE+P+ + E L ++ L+ G+ Y+ ++ + TP RL + + GL+ Sbjct: 1 MATLLFEIGTEELPSWYVTQGREALELLTRERLEAAGLAYEGLKGFATPRRLAVQVAGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 SP + + GP GA KA GF R+ G+ ++ +KG Sbjct: 61 DTSPVRELLQRGPAASAAFDASGAPTKAAVGFARANGVDPSE--LFVQETEKGAYVFFRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R D+L ++ ++ +P P+ MRW +P ++RP+ ++ +L + Sbjct: 119 RVGGEAARDLLPPLLAALVRDLPAPRKMRWGEVETP-----FLRPVAWLVALL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + + G T GHRF P+ ++ + Y LE A V+ DPE RR A L A Sbjct: 169 AVLPVTAAGVTAGRTTRGHRFLREAPVALEHAEAYEGALERAAVIADPEKRRAATLRAAC 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A GLELV D +LL+E+ L+E +GSFD++YL LP+E++ T+ +Q+ F TR Sbjct: 229 EAAQQGGLELVCDPELLDEVANLIEIPVAILGSFDERYLSLPDEVLATTMIHHQRFFPTR 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G LA F+ VSN D A + +G + RL DA FW+ D+ Sbjct: 289 RPGGSLAPSFVGVSNNDVPD-KAVVRRGYEGALNPRLFDASFFWEADR------------ 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL--- 410 S+ L Q L + FH +GT ++V+R V +A+L+ + Sbjct: 336 --------SRSLSQHAWGLS--GIGFHKGLGTVADKVARTHVAATALAKLVGLEEPERAA 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++ A+ + KADL T++V E PEL+G IG+ YA+ + +E ++P +P+ Sbjct: 386 LEGALPVFKADLSTQMVGELPELEGVIGRAYALAEGYPPEVAAVLEHGVRPVKAGGPLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 ++ ++LAD+LD L+ F+A+ ++PSGS DP+ LRR L + RI+ +PL +F+ Sbjct: 446 SRAGAVLALADRLDKLLGFFALKQRPSGSADPFGLRRDALAVARILNAQGWRVPLGEFVR 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + F DR+ L +R L A++ ++T Sbjct: 506 TAAAGLAEAKKPPLTDEVIAEVEAFIWDRVTGLLEAEGVRPALARAVIADGP-PVITAAR 564 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 L + + + L KR + + +I+P+ E LY I Sbjct: 565 RAHLLRALSADPEFAQLLQLYKRAANLAKQGAE-----DADINPKRFSSPYEAPLYDAIP 619 Query: 633 DFGTHIQESMDHKRYHQI-----------------GDLLHSICEPIEIFFDQVLVNVDDR 675 + E + R + ++ +P++ F D VLV V+D Sbjct: 620 PAKAALGELLAAVRSRLAPWDLGEGPAQGVGPLTGLAAVLALKKPLDAFLDNVLVMVEDE 679 Query: 676 EVRDNRLSLLQYIKNIILIVI 696 VR NRL+LL + + + Sbjct: 680 AVRRNRLALLGEVSASLRELG 700 >gi|290581046|ref|YP_003485438.1| putative glycyl-tRNA synthetase subunit beta [Streptococcus mutans NN2025] gi|254997945|dbj|BAH88546.1| putative glycyl-tRNA synthetase beta subunit [Streptococcus mutans NN2025] Length = 679 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 201/725 (27%), Positives = 342/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L+ + ++ + + TP RL + + L+ Sbjct: 3 KNLLVELGLEEMPAYIVKPSIKQLRQKMGQFLETNRLSFEKIEMFSTPRRLAIRVVHLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF+R GL T + I+ KG+ Y+ V + Sbjct: 63 QQSDYSEDFKGPAKKIALDADGHFTKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTK 119 Query: 115 -KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + ++VL ++ +Q + +P +M W+ F +IRP+ +++ +L + Sbjct: 120 NEAGKPAKEVLGGLI-DVLQSLTFPVNMHWANH-----TFEYIRPVHTLVVLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + IDL+ +I G I+ GHRF ++ S Y DL V+ D + R + I+ Sbjct: 169 EAIDLNFLDIKSGRISRGHRFLGQET-QIASAASYETDLRAEFVIADAKEREDMIIEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++ + + D+ LL E++ LVE+ FMGSFD+KYL LPEE++ ++KT+Q+ FV R Sbjct: 228 KIEKTYNVSVEIDEALLSEVLNLVEYPTAFMGSFDEKYLELPEEVLVTSMKTHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI V N +V+GN +V+ ARLED FW+ DQ Sbjct: 288 DQTGKLLPNFISVRNG-NEQFIENVVKGNEKVLLARLEDGEFFWREDQRLQ--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---IDADVAL 410 + + +L + V FH +IG+ E + R + + +A+ D + A Sbjct: 338 -----------IADLVEKLKL--VTFHERIGSLYEHMMRTKQIAAYLAEQADLTDQEKAE 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++RA + K DL T +V EF ELQG +G++YA L E+ + AI EH P +P Sbjct: 385 IERAASIYKFDLLTGMVGEFDELQGIMGEKYATLAGESQAVATAIREHYLPISSDGQLPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 +K+ +++ADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ + +IPL + Sbjct: 445 SKVGAILAVADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDKFGWEIPLDRLVA 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++ F R++ + D+ + D+ EA+L + V+ Sbjct: 505 NLYQFDFDSLTYQNQADVLAFIRGRVEKMI-DKSVPKDIREAVLDSSTHIVRLEVEAAAA 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + E E+ L+ + + Sbjct: 564 LAEKADEDHFKASIESLSRVFNLAEKSNHNEM-----VDTSIFENEYEQELFDAVEELHF 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + D L + I+ FFD +V VDD V+ NRL+LL + + Sbjct: 619 -------TEDMTDNVDRLFVLSPIIDAFFDNTMVMVDDEAVKKNRLNLLARLAQKANTIA 671 Query: 697 NVQKI 701 +I Sbjct: 672 AFNEI 676 >gi|254457801|ref|ZP_05071228.1| glycyl-tRNA synthetase, beta subunit [Campylobacterales bacterium GD 1] gi|207085194|gb|EDZ62479.1| glycyl-tRNA synthetase, beta subunit [Campylobacterales bacterium GD 1] Length = 672 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 183/716 (25%), Positives = 338/716 (47%), Gaps = 68/716 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K ++ + +L++ ++ Y+TP RL ++ + + Sbjct: 5 LLIEIGVEELPAVPLLKELRNIEKKYVDILEKNSLL-GEFEFYYTPRRLVIWHREFNTQQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + +EE G + G A GF + G+ I + K +V Sbjct: 64 ADSVEEFFGAPIAVAYKDGEPTPAALGFAKKCGVS-IDEISAGTKGGK-EVLYYKKDVKG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++L I+ I + + KSMRW + S+ S+IRP++ + +L ++++D Sbjct: 122 KESIELLSDIINTWINSLDFGKSMRWGS-----SSESFIRPVRWVNVLL-----GDELVD 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 ++L + T+ HR + + Y L++ V L E RR IL + L Sbjct: 172 VELFGVTSKKETFVHRISNFDSVSISGAKEYFDVLKKGGVTLFQEQRREDILANFASLEK 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G+++ D DLL+E++ + E +G+FD+++L LP E+I ++K +Q+ F ++G Sbjct: 232 DNGIQIEVDADLLDEVVAITEHPTALLGTFDEEFLRLPPEVIITSMKEHQRYFPVF-KDG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F++VSN +D ++GN RV+ RL D L F+ D N + L+ Sbjct: 291 KLLNKFVVVSNALTNDFSEV-IEGNERVLRPRLADGLFFYDNDLKNGLSTEGLE------ 343 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRAI 415 V F +G+ +++ R + + D +DRAI Sbjct: 344 ------------------KVAFFKGLGSVADKIQREAKIANILFDKYKPDAKKEDLDRAI 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL +E+V EF ELQG +G YA+ Q E+ AI E P G +P+ IS Sbjct: 386 SLAKADLTSEMVYEFTELQGLMGSYYALEQGESQEVATAINEQYLPDGEDSALPSTAISA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------ 529 V+++ KLDTL+ ++IN+ P+GS+DP+ALRRA G++RI E+ ++ + + + Sbjct: 446 IVAMSIKLDTLLALFSINQIPTGSRDPFALRRAVNGLVRITREHNLEFDIVETMTELASG 505 Query: 530 ----EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + Q L FF +R+K Y + ++EA+L ++ + I+ L+ S+ Sbjct: 506 YAEIDMQKLESFFLERVKQYYK---VNPSIVEAVLASGEREIVAMGQKIEALDAIASAEG 562 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 + + KR+ I + + + + ++E+ L+ ++ + + Sbjct: 563 FSESFSTFKRVANITKDI---DLSQDMSVDAKLFEDKSEEALFNAYNNVASK-----SYD 614 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + D L + ++ FF+ V+VN ++ V++NR SL+ I IL + +++++ Sbjct: 615 SYEEELDALLGLKPELDKFFEGVMVNAENEAVKNNRKSLVASIYKSILNIADIKEV 670 >gi|315637198|ref|ZP_07892419.1| glycyl-tRNA synthetase beta subunit [Arcobacter butzleri JV22] gi|315478504|gb|EFU69216.1| glycyl-tRNA synthetase beta subunit [Arcobacter butzleri JV22] Length = 671 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 190/715 (26%), Positives = 346/715 (48%), Gaps = 67/715 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA ++ +L++ ++ + ++TP RL L+ + Sbjct: 5 LLIEIGVEELPAIPFLNELPNIEKKWSDILEKNRLLC-DFDFFYTPRRLVLWHREFQVKQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E+ G + G A F G+ KKD KG+V Sbjct: 64 EDSTIEQFGAPIKIAYKDGVPTGAAISFATKLGVDVS--VLEKKDLGKGEVLYFKQEVIG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L ++ + + + KSMRW++ S+IRP++S+ +L ++I+D Sbjct: 122 SESKTLLNEMINEFVASLNFGKSMRWASRTD-----SFIRPIRSLSVLL-----GDEIVD 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +L + N ++ HR + P Y L+++ V+L P+ RR IL + Sbjct: 172 AELFGVKSSNFSFAHRMVSYEPFTYSFAGDYFCKLDKSGVILYPDERRKIILEQMKNIEQ 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +++ D +LLEE++ + E+ +G FD+++L LPEE+I ++K NQ+ F ++G Sbjct: 232 RHNIKIEIDTELLEEVVAITEYPTALIGKFDEEFLELPEEVIVTSMKENQRYFAVY-KDG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N FI+VSN + +D G I+QGN +V+ RL DA+ F+K D N + LK Sbjct: 291 NLTNNFIVVSNAKTNDFG-YIIQGNEKVLRPRLADAMFFYKNDIKNGLSNEGLK------ 343 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-DVALVDRAIV 416 +VF +G+ ++ R + +A + + L+ RA++ Sbjct: 344 ------------------KLVFVEGLGSMYDKCEREAKIASYLANTFEVKEKELIQRAVM 385 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 LSKADL +E+V EF ELQG +G YA + E+ A++E P G +P+N S Sbjct: 386 LSKADLMSEMVYEFTELQGLMGYYYAKIAKEDNLVSLALKEQYLPTGEDSELPSNVFSSI 445 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--- 533 V+L++KLD L+ +++ + P+GSKDP+ LRRA GI++I +E+K+ I LS+ I++ + Sbjct: 446 VALSNKLDNLMALFSVGKIPTGSKDPFGLRRAAAGIVKIAMEHKLPIDLSKIIDELSTNY 505 Query: 534 -------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 LI FF++RL + +++A+L ++ I + LN S Sbjct: 506 KNLDKKVLIEFFNERLFKIFE---VNPTVLKAVLASGETDIYKISQKLCALNPIVQSDNF 562 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + ++ + KR+ I+ + L I + + EK L+A ++ + +K Sbjct: 563 KDYVATFKRVANIIKD---VDVNSKLLIDEKLFEDKEEKELFAKFNEVQSKT-----YKT 614 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + + L ++ ++ FFD V VN ++ +++ NR +L+ I + ++++I Sbjct: 615 YDEELEALFALKPELDNFFDNVFVNHENEKIKINRKNLVGVIYQGFRKIADIKEI 669 >gi|86607462|ref|YP_476225.1| glycyl-tRNA synthetase subunit beta [Synechococcus sp. JA-3-3Ab] gi|86556004|gb|ABD00962.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. JA-3-3Ab] Length = 730 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 194/750 (25%), Positives = 320/750 (42%), Gaps = 79/750 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLE+ EE+PA A E + L E + + M+ + TP RL + L+GL Sbjct: 1 MVAYLLEVGCEELPASFVDSALEQWRTGIPASLAEAHLQAEQMQLFGTPRRLSVLLQGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP V G A + F + G+ S + KG AV R Sbjct: 61 TQQPDRTLEVKGPPVQVAYQDGRLTPAGEKFAQKQGVDPGSLEI--RQVGKGSFVFAVQR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK-- 172 R VL+ + P I + + MRW + RP++ ++ + + Sbjct: 119 VRGRPTAAVLQELAPTWITSLSGERLMRWGYGD-----LKFPRPIRWLVSLWEDQVLPLL 173 Query: 173 -EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 L + G ++ GHR + ++ + Y++ ++EA V DP R I + Sbjct: 174 WPTSEGNPLPGLVAGRVSRGHRVLGSQQVVLERAESYVQQMQEAGVSPDPTAREAYIQAE 233 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA V E LL E++ LVEW +G F+ ++L LP +I + T+Q+ F Sbjct: 234 VTKLARQVNGEAQIPAPLLREVVHLVEWPTAVLGRFEPEFLRLPPAVIETVMITHQRYFP 293 Query: 292 TRTREG--VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 R L FI +SN I GNSRVV ARL DA F++ D+ Sbjct: 294 VRDGRDPRKLLPYFITISNGDPRQS-ERIGAGNSRVVRARLADARFFYEEDRRI------ 346 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 PL QR+ RL V F +G+ ++V RIR + + IA ++ D Sbjct: 347 --------------PLAQRVERLQ--AVTFAEGLGSMRDKVERIRHISRLIAAALNLDPQ 390 Query: 410 ---LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 LVDR L KADL T++V EFPELQG +G EYA E + + IE+H P G E Sbjct: 391 EQALVDRTAYLCKADLVTQMVYEFPELQGIMGAEYARQDGEPEAVAEGIEQHYWPLGAGE 450 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + V AD+LDTL+ + + + P+GS D +ALRRA ++ I + + Sbjct: 451 ALPASLTGRVVGWADRLDTLVGMFRLGQIPTGSSDRFALRRAANSLVLIAWDAGWTFDFN 510 Query: 527 QFIED-------------QNLILF-FHDRLKLYLHDRDIRHDLIEAIL------------ 560 ++ + L F L ++ I +DL+ A++ Sbjct: 511 SLLQRVVQDYAAGDEKTLKALQEFLLQRLQILLQEEKRIDYDLVRAVVGDPEALQEGEPA 570 Query: 561 -----RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN--REISLE 613 R NL + ++L ++ + + R ++ A + + + + Sbjct: 571 KSDLPRRALANLPLTLLRAEYLQHLRATGELADLYPTLNRCARLAAQGDLDSAVLDPAAA 630 Query: 614 ISPQYLLLEAEKRLYAVISDF-GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNV 672 + L AE+ LY ++ ++ + + + L + ++ FF+ VLV Sbjct: 631 VDADLLQEAAERELYEACQRVYRLGVEPALQ-GDFTPLVEGLQAAAPAVDRFFEAVLVMD 689 Query: 673 DDREVRDNRLSLLQYIKNIILIVINVQKIV 702 D +R NRL+LL ++N ++ ++ +V Sbjct: 690 PDPRLRANRLNLLGVLRNQSRLLGDMGAVV 719 >gi|152990481|ref|YP_001356203.1| glycyl-tRNA synthetase subunit beta [Nitratiruptor sp. SB155-2] gi|151422342|dbj|BAF69846.1| glycyl-tRNA synthetase, beta subunit [Nitratiruptor sp. SB155-2] Length = 678 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 199/725 (27%), Positives = 334/725 (46%), Gaps = 75/725 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L+EI EE+PA K ++ +L+ G++ + ++TP RL L+ + Sbjct: 3 MTEPLLIEIGVEELPAIPFLKELPNIEKKWEKILEANGLLCE-FEFFYTPRRLVLWHRNF 61 Query: 60 SPHSPEKIEERLG-P-----RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 +E G P + G A GF + G+ K+ ++ Sbjct: 62 KTKQDTTYQEYFGAPLHIAFKDGQPTPAATGFAKKCGVSVEELSTTKR--GSTEILYYKK 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++L +V ++ + + KSMRW S+IRP++ + E Sbjct: 120 EISGKPSVEILPEMVYEWLKSLDFGKSMRWGNLKE-----SFIRPIRW-----GIINLGE 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + I +L I N TY HR P++V + Y L+ VLL PE R I + Sbjct: 170 RFIKAELFGITTANYTYLHRSVTTEPVQVANAKEYFEVLKNGGVLLYPEARYEKIDVEFA 229 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + G+ + +D++LL E++ + E+ GSF++K+L LP E+I ++K +Q+ F Sbjct: 230 GIEKE-GIVIEKDEELLAEVVAITEFPTALKGSFEEKFLQLPPEVIVTSMKEHQRYFPVY 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L N F+ VSN D + IV+GN RV+ ARL DAL FW+ D + L+ Sbjct: 289 -KEGKLQNGFVFVSNAYTDDF-SLIVKGNERVLKARLSDALFFWENDLKKGLDFEGLE-- 344 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ-------LIDA 406 +VVF +GT ++ R + + + Sbjct: 345 ----------------------NVVFMDGLGTLFDKEVRELKIANHLLEDYRALFSESGV 382 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A+++RAI+LS ADL TE+V EF ELQG +G YA+ Q E+ + AI+E P G Sbjct: 383 TKAMLERAIMLSYADLLTEMVYEFTELQGIMGYYYALAQGEDEAVALAIKEQYLPSGEES 442 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ++P+ S V+L+ KLDTL+ +++ + P+GSKDP+ LRRA G+IRI+L +D +S Sbjct: 443 DLPSTLFSALVALSKKLDTLMALFSVGKIPTGSKDPFGLRRAANGVIRIVLAYNLDFDIS 502 Query: 527 QFIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ L FF +R+ D+ +I+A++ +L+ I IK Sbjct: 503 KIFDEIRGEYKDFDTNKLENFFIERI---NQFYDVNPSVIKAVIESGERDLVQIDKKIKA 559 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L S+ + + KR+ I+ + + E EKRL+ ++ T Sbjct: 560 LATIVESSDFKDIFTTFKRVANIVKD---VDVSKETPVDENLFESEYEKRLWDRFNEVYT 616 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ Y D L + I++FFD VLVN +D +R NR +L+ I + Sbjct: 617 K-----EYPDYESRLDALFGLKHDIDLFFDNVLVNAEDERLRQNRKNLIASIYKAFKEIA 671 Query: 697 NVQKI 701 ++++I Sbjct: 672 DIKEI 676 >gi|319939735|ref|ZP_08014092.1| glycyl-tRNA synthetase beta subunit [Streptococcus anginosus 1_2_62CV] gi|319811073|gb|EFW07384.1| glycyl-tRNA synthetase beta subunit [Streptococcus anginosus 1_2_62CV] Length = 679 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 198/725 (27%), Positives = 341/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + + + + TP RL + + LS Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKIAAFLTDNRLTFDKIEMFSTPRRLAVRVSNLSE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF+R GL I KG+ Y+ V + Sbjct: 63 KQTDLTEDFKGPSKKIALDADGHFTKAAQGFVRGKGLTVED---ITFREVKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +E+++ V + + +P +M W + F +IRP+ ++ +L + Sbjct: 120 QEIGKPVEELI-DGVADVLTSLSFPVNMHWG-----TNTFEYIRPVHTLTVLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + ++L +I G + GHRF +K+QS D Y DL + V+ P R N IL+ Sbjct: 169 ESFLMNLFDIESGRTSRGHRFLGHE-VKIQSADSYEEDLRKVFVIASPMERENMILDQIK 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + + + D+DLL+E++ L+E+ F+G FD++YL +PEE++ ++K NQ+ FV R Sbjct: 228 EIEKMHNVHVEIDEDLLDEVLNLIEYPTAFIGRFDERYLDVPEEVLVTSMKVNQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L F+ + N A + +V+GN +V+ ARLEDA FW+ DQ + Sbjct: 288 NENGKLLPYFVSIRNGNA-EHLENVVKGNQKVLVARLEDAEFFWREDQRLV--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK---KIAQLIDADVAL 410 + + +L +V FH KIG+ E + R + + AQL ++ Sbjct: 338 -----------ISDLVEKLK--NVTFHEKIGSLAEHMERTAKIAALLAEKAQLSKQEMKD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 VARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENTAVAKAIREHYLPTASDGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 K+ +S+ADK+DT+++F+++ PSGS DPYALRRAT G++RI+ + I L + +E Sbjct: 445 TKVGAILSIADKMDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWHIALDELVE 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + D D+ D++ ++L + +V+ Sbjct: 505 EIYALQFDSLTYSDKEQVLDFFRARIEKMM-DSDVPKDIVSSVLNSSTFVVRYLVEAASL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + E + + EK L+A + + Sbjct: 564 LAEKAQEDSFKSSVESLARVFNLAEKAETASV-----VDESLFENAEEKALHAAVENLTL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + L ++ I+ FFD +V +D +R NRL+L+ + V Sbjct: 619 -------SDDLADNIEQLFALSPVIDAFFDNTMVMAEDEAIRANRLALIAALMTKAKKVA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|166367631|ref|YP_001659904.1| glycyl-tRNA synthetase subunit beta [Microcystis aeruginosa NIES-843] gi|166090004|dbj|BAG04712.1| glycyl-tRNA synthetase beta chain [Microcystis aeruginosa NIES-843] Length = 710 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 188/714 (26%), Positives = 305/714 (42%), Gaps = 71/714 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ +EE+PA A + L+ E + ++ Y TP RL + + GL Sbjct: 2 DFLLEVGTEELPADFVDSAIAQWRERVSKSLETESLDATAIQVYATPRRLAVLITGLPTE 61 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + EE GP V G A +GF R G+ T + + KG+ P Sbjct: 62 QEARSEEIKGPPVSAAYKNGQITPAGEGFARKQGVSTAAFSI--RATDKGEFVYIEKTIP 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++L ++P I ++ + MRW + RP++ +L ++ E ++I Sbjct: 120 GRPTAEILTELIPQWITRLEGRRFMRWGDGD-----LRFPRPIRWLLTLVDGEVLPLELI 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + +T+GHR P + + Y+ L V DP+ R+ I LA Sbjct: 175 NGS-TTLTSDRLTFGHRILHPQSLAISHPQAYLTSLRSIFVEADPQVRQQIITAQITTLA 233 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + DLL E+ LVE+ +G FD ++L LP E+I + T+Q+ F +T + Sbjct: 234 KKLKGVAEIPADLLAEVTNLVEYPTAIVGKFDDEFLELPPEVIITVMVTHQRYFPVKTPQ 293 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L+ FI +SN I GN RV+ ARL DA F+ D + Sbjct: 294 G-LSPYFITISNGDP-QKSEIISAGNERVIRARLADARFFYTADCDE------------- 338 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDR 413 PLD + +L+ V F ++GT ++V RI + + I + ++ D ++ Sbjct: 339 -------PLDSFLPQLET--VTFQEELGTMRDKVDRIMEIAQMIVEQLNLDEQSRSDIES 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 +L KADL T++V EFPELQG + ++YA++ E+ I EH PR + +P Sbjct: 390 TAMLCKADLVTQMVYEFPELQGVMAEKYALISGESAVVARGIFEHYLPRNAGDILPETIT 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 V +AD+LDTL+ + + P+GS DP+ALRRA II II +I L IE Sbjct: 450 GQVVGIADRLDTLVGIFGLGMLPTGSSDPFALRRAANAIISIIWSANFNINLLALIEQIA 509 Query: 534 ----------------LILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLL 568 + FF RL+ L D I +DL+ A+L + +NLL Sbjct: 510 KDFVTCHPDKPNPANLIKDFFLQRLQTLLIDDLRIDYDLVNAVLGENDPEYKSRALENLL 569 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR--EISLEISPQYLLLEAEKR 626 + + L + + + R ++ + E I+ + +E Sbjct: 570 DTRERARFLCQIRQDGQLANIYETVNRSTRLAQKGDLDTTTLEAKGIINTELFEQSSEPA 629 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREV 677 Y + + + + Y ++ L +I + FFD VLV + V Sbjct: 630 FYDALIALIPETISAREQRDYQRLVTALTAISPLVADFFDGENSVLVMAEKESV 683 >gi|306829215|ref|ZP_07462405.1| glycyl-tRNA synthetase beta subunit [Streptococcus mitis ATCC 6249] gi|304428301|gb|EFM31391.1| glycyl-tRNA synthetase beta subunit [Streptococcus mitis ATCC 6249] Length = 678 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 331/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMASFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDGDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGKPVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ + F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF ++QS Y DL V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGQET-EIQSALSYEEDLRAQFVIADPREREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLDVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A G ++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNAEHLGNV-IKGNEKVLVARLEDGEFFWREDQKLI--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--HVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTAAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLASSNFVVADMLEAASALVEASKKEDFKS 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + P E EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGSD-----TVDPALFENEEEKALAEAVESLVLSGTAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V +D+ +R NRL++L + + +I Sbjct: 623 QQLEQLFALSPVIDAFFENTMVMAEDQSIRQNRLAILSQLTKKAAKLARFNQI 675 >gi|256027636|ref|ZP_05441470.1| glycyl-tRNA synthetase beta chain [Fusobacterium sp. D11] gi|289765594|ref|ZP_06524972.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. D11] gi|289717149|gb|EFD81161.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. D11] Length = 686 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 197/728 (27%), Positives = 352/728 (48%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A DL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALADLKTNFERKLKNNRIKFDGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ +K D KG+ Sbjct: 62 QEDLDELSIGPSRERAYKNGALTKAGEGFLKAHRIEEEQIEIVKND--KGEYIAFKRFSK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + +PKSMRWS + + RP++ L + +K++ Sbjct: 120 GKPTETILPKILKALVLEETFPKSMRWSDKN-----IRFARPIEWFLALY-----GDKVV 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S++ Y++ + E V++D RR ++ + + Sbjct: 170 DFEIEGIKSSNKSKGHRFFG-KEFEVSSVEDYLKKIRENNVIIDISERRK-MIEEMINNS 227 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F +++ Sbjct: 228 LLEDEKADVDEALLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRYFPILSKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT ++V R + + + + + + + R Sbjct: 330 ----LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIVR--EFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ EF +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I A+L + DN+ T +++ Sbjct: 504 LDTLEADKVLKADRAKVEADVLDFLKQRIINVFTDMKYRKDVILAVLDKDADNITTALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E S K + L + KR+ I+ + + I + + EK LY Sbjct: 564 VRVITEKLSKDKMQALLQAVKRVANIMKGNK------DVTIKEKLFKTDVEKTLYTDSKR 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 G I++S+ K Y + L ++ I+ +FD V+V +D+ VRDNR++ L YI N+ Sbjct: 618 VGEEIEKSIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRINQLTYIMNLFD 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 RIAYLNKL 685 >gi|228478361|ref|ZP_04062969.1| glycyl-tRNA synthetase, beta subunit [Streptococcus salivarius SK126] gi|228250040|gb|EEK09310.1| glycyl-tRNA synthetase, beta subunit [Streptococcus salivarius SK126] Length = 678 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 203/713 (28%), Positives = 338/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + R ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGRPAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ + F +IRP+ ++ +L E+ +DLD +I Sbjct: 132 G-VPEVLASLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----GEEALDLDFLDIKS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLGHE-VEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGKLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEETAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYALSFDSLSY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ +A+L N + +++ L+E + + Sbjct: 517 DNQAEVLNFIKARVDKMMG--RTPKDIKDAVLAASNFVVADMLEAANALSEAAKADGYKA 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + + EK L I + S Sbjct: 575 AVESLSRAFNLAEKA-----DASVAVDASLFENDQEKALAKAIEELELTGSASDK----- 624 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V +D V++NRL+LL + V ++ Sbjct: 625 --LAQLFALSPVIDAFFDNTMVMAEDEAVKNNRLALLAGLVAKANAVAAFNQL 675 >gi|332524722|ref|ZP_08400920.1| glycyl-tRNA synthetase subunit beta [Rubrivivax benzoatilyticus JA2] gi|332108029|gb|EGJ09253.1| glycyl-tRNA synthetase subunit beta [Rubrivivax benzoatilyticus JA2] Length = 704 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 185/731 (25%), Positives = 339/731 (46%), Gaps = 64/731 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLL--KEEGVIYQNMRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K E + +L L ++ + Y +P RL + + + Sbjct: 5 KNLLVELFVEELPPKALKKLGEAFAAVLADGLRAQQLAAADAAVTAYASPRRLAVQVAAV 64 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLR--STGLQTISDCQIKKDPKKGDVYL 110 + +P++ + +L P G+ A+ L G + ++ + ++ K + Sbjct: 65 AAKAPDQAVSTKLMPVAVALSSDGSASPALLKKLAALGHGAEVVAQLK-RQGEGKNEALY 123 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 +P + + L+ + A+ K+P PK M++ ++ ++RP ++ + Sbjct: 124 LDSVQPGATLAEGLQKALADAVAKLPIPKVMKYQLADG-WTSVDFVRPAHGLIAL----- 177 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLEEAM-VLLDPECRRNAI 228 +++ + + + G T GHRF A P ++++ D Y L + V+ RR I Sbjct: 178 HGSQVVPVGVLGLQAGRTTRGHRFEAAAPTVEIRDADSYAAQLRDEGAVIASFAERRAEI 237 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A+ GL+ ++D LL+E+ LVE V + F+ ++L +P+E + LT+K NQK Sbjct: 238 VRQLNEAAANEGLKPIDDDALLDEVTALVERPNVLLARFEPEFLAVPQECLILTMKANQK 297 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F +G L F++VSNI+ +D + +V GN RVV RL DA F+ +D+ Sbjct: 298 YFPLLDAQGRLTERFLVVSNIRPADA-SRVVGGNERVVRPRLADAKFFFDQDR------- 349 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 K L+ R+ L VV+H K+G+QGERV R+R + + I + + Sbjct: 350 -------------KKTLESRIPAL--AKVVYHGKLGSQGERVERVRTIARHIGEQLGGSA 394 Query: 409 ALVDRAIVLSKADLC--TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A T++V EFPELQG +G YA E + A+E+H +PR + Sbjct: 395 LAAQADRAALLAKADLLTDMVGEFPELQGVMGGYYARHDGETEAVALAVEDHYRPRFAGD 454 Query: 467 NVPTNKIS---ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 +P ITV+LADKL+TL + I + P+G KDP+ALRR LG+IR+++E + + Sbjct: 455 ALPRTDAGLAGITVALADKLETLAGLFGIGQLPTGDKDPFALRRHALGVIRMLVEKALPL 514 Query: 524 PLSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + ++ F +RL +L ++ ++A++ + + Sbjct: 515 SVPELVSAAFRAFPEGHGQAQAEVLRFLDERLVGWLREQGYSAHEVDAVVALRTERWAEL 574 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + + F + + + KR+ IL K + + P L+ AE L+ Sbjct: 575 PQRLAAVRAFAALPEAPALAAANKRVGNILK---KSDEAAGGAVEPARLVEPAEAALFDA 631 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + E+ Y L ++ P++ FFD V+VN DD +R NRL+LL + Sbjct: 632 LGRVAPQADEAFARADYTASLQALAALKAPVDAFFDAVMVNADDPALRRNRLALLGTLHA 691 Query: 691 IILIVINVQKI 701 + V ++ ++ Sbjct: 692 AMNRVADLSRL 702 >gi|260495294|ref|ZP_05815421.1| glycyl-tRNA synthetase beta subunit [Fusobacterium sp. 3_1_33] gi|260197072|gb|EEW94592.1| glycyl-tRNA synthetase beta subunit [Fusobacterium sp. 3_1_33] Length = 686 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 199/728 (27%), Positives = 351/728 (48%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A DL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALADLKTNFERKLKNNRIKFDGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ +K D KG+ Sbjct: 62 QEDLDELSIGPSRERAYKNGALTKAGEGFLKAHRIEEEQIEIVKND--KGEYIAFKRFSK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + +PKSMRWS + + RP++ L + +K++ Sbjct: 120 GKPTETILPEILKALVLEETFPKSMRWSDKN-----IRFARPIEWFLALY-----GDKVV 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S++ Y++ + E V++D RR I + L Sbjct: 170 DFEIEGIKSSNKSKGHRFFG-KEFEVSSVEDYLKKIRENNVIIDISERRKMIEEMINNLL 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F +++ Sbjct: 229 LEDE-KADVDEALLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRYFPILSKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT ++V R + + + + + + + R Sbjct: 330 ----LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ E F +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I A+L + DN+ T +++ Sbjct: 504 LDTLEADKVLKADRAKVEADVLDFLKQRIINVFTDMKYRKDVILAVLDKDADNITTALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E S K + L + KR+ I+ + + I + + EK LY Sbjct: 564 VRVITEKLSKDKMQALLQAVKRVANIMKGNK------DITIKEKLFKTDIEKTLYTDSKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 G I++S+ K Y + L ++ I+ +FD V+V +D+ VRDNR++ L YI N+ Sbjct: 618 VGEEIEKSIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRINQLTYIMNLFD 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 RIAYLNKL 685 >gi|24378935|ref|NP_720890.1| glycyl-tRNA synthetase subunit beta [Streptococcus mutans UA159] gi|81844378|sp|Q8CWY5|SYGB_STRMU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|24376820|gb|AAN58196.1|AE014890_9 putative glycyl-tRNA synthetase (beta subunit) [Streptococcus mutans UA159] Length = 679 Score = 512 bits (1318), Expect = e-142, Method: Composition-based stats. Identities = 200/725 (27%), Positives = 341/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L+ + ++ + + TP RL + + L+ Sbjct: 3 KNLLVELGLEEMPAYVVKPSIKQLRQKMGQFLETNRLSFEKIEMFSTPRRLAIRVVHLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF+R GL T + I+ KG+ Y+ V + Sbjct: 63 QQSDYSEDFKGPAKKIALDADGHFTKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTK 119 Query: 115 -KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + ++VL ++ +Q + +P +M W+ F +IRP+ +++ +L + Sbjct: 120 NEAGKPAKEVLGGLI-DVLQSLTFPVNMHWANH-----TFEYIRPVHTLVVLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + +DL+ +I G I+ GHRF ++ S Y DL V+ D + R + I+ Sbjct: 169 EALDLNFLDIKSGRISRGHRFLGQET-QIASAASYETDLRAEFVIADAKEREDMIIEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + + + D+ LL E++ LVE+ FMGSFD+KYL LPEE++ ++KT+Q+ FV R Sbjct: 228 EIEKTYNVSVEIDEALLSEVLNLVEYPTAFMGSFDEKYLELPEEVLVTSMKTHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI V N +V+GN +V+ ARLED FW+ DQ Sbjct: 288 DQTGKLLPNFISVRNG-NEQFIENVVKGNEKVLLARLEDGEFFWREDQRLQ--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---IDADVAL 410 + + +L + V FH KIG+ E + R + + +A+ D + A Sbjct: 338 -----------IADLVEKLKL--VTFHEKIGSLYEHMMRTKQIAAYLAEQADLTDQEKAE 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++RA + K DL T +V EF ELQG +G++YA L E+ + A+ EH P +P Sbjct: 385 IERAASIYKFDLLTGMVGEFDELQGIMGEKYATLAGESQAVATAVREHYLPISSDGQLPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 +K+ +++ADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ + +IPL + Sbjct: 445 SKVGAILAVADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDKFGWEIPLDRLVA 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++ F R++ + D+ + D+ EA+L + V+ Sbjct: 505 NLYQFDFDSLTYQNQADVLAFIRGRVEKMI-DKSVPKDIREAVLDSSTHIVRLEVEAAAA 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + E E+ L+ + + Sbjct: 564 LAEKADEDHFKASIESLSRVFNLAEKSNHNEM-----VDTSIFENEYEQELFDAVEELHF 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + D L + I+ FFD +V VDD V+ NRL+LL + + Sbjct: 619 -------TEDMTDNVDRLFVLSPIIDAFFDNTMVMVDDEAVKKNRLNLLDRLAQKANTIA 671 Query: 697 NVQKI 701 +I Sbjct: 672 AFNEI 676 >gi|290967923|ref|ZP_06559473.1| glycyl-tRNA synthetase, beta subunit [Megasphaera genomosp. type_1 str. 28L] gi|290782062|gb|EFD94640.1| glycyl-tRNA synthetase, beta subunit [Megasphaera genomosp. type_1 str. 28L] Length = 684 Score = 512 bits (1318), Expect = e-142, Method: Composition-based stats. Identities = 193/728 (26%), Positives = 321/728 (44%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI +EE+PA L L+E + + +R TP RL L + Sbjct: 1 MSKDILLEIGTEEVPAHAMPGILRQLREAAATALQEAHIPFDAVRTVGTPRRLALLVTAA 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + GP G KA GF R GL + +D A Sbjct: 61 AEMQDAVTTVHKGPSARIAYAADGTPTKAALGFARGLGLDVTA--LRVQDG----YVFAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +L +++P IQ + +P SMRW F +IRP++ ++ + Sbjct: 115 VTHTGEATKTLLPSLLPALIQHLSFPNSMRWGR-----ETFRFIRPIRWLVALF-----G 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I L + G + GHRF + S Y + +++DP+ R I ++ Sbjct: 165 EEVIPFTLAGVTTGRRSRGHRFLGDGDFDIPSAQAYEATARDHFLMVDPKERETYIQHEL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R +A G + D LLEE++ LVE+ V GSFD+ YL LPE +I +K +Q+ F Sbjct: 225 CRELAAAGAKQTVDPVLLEEVVYLVEYPTVLCGSFDEAYLQLPEAVIITPMKDHQRYFPM 284 Query: 293 RT-REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L N F+ V N A + GN RV+ ARL+DA F+ D+ Sbjct: 285 YSAATGRLMNRFLTVRNGDARY-LDTVRHGNERVLRARLDDAKFFFTEDR---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK--IAQLIDADVA 409 + L + L +VF +GT ++ R++ L + + + A Sbjct: 334 ----------KQSLWAHVESLR--HIVFQNGLGTLYDKALRLQKLTVYLNHSLQLGLEDA 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 ++RA +L+KADL T++V EF ELQG +GKEYA L E+ + A++E PR +++P Sbjct: 382 QLERACLLAKADLSTQMVMEFTELQGVMGKEYAKLDGESEAVAAALQEQYLPRYAGDDLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ADK+DTL+ + + + P+GS+DPYALRR T+G++ I+L+ + D ++ + Sbjct: 442 QTVMGSVLSVADKIDTLVGMFRLGKLPTGSQDPYALRRQTIGVLHILLQRQWDADMATLL 501 Query: 530 E----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + L F RLK DR LIE + N + Sbjct: 502 DAAAAGYEAADEAAGDVRKQLEAFIALRLKNIFQDRGHEASLIEGAMAGHPLNAMQGQRR 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ L + E L + R+ ++ + ++ AE+ L+AV Sbjct: 562 VEALETARRLKQ-EDLLQAYTRVGNMVR------EDTPTHVTEALFTAAAERDLWAVCRQ 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + +L + + I F D V V ++ +R+NRL LL + +I Sbjct: 615 MEAALPAVYAAYDFEAALRILRTGMDAIRTFLDTVRVLDENIAIRENRLHLLARVYALIR 674 Query: 694 IVINVQKI 701 +++K+ Sbjct: 675 PFGDIRKV 682 >gi|94676541|ref|YP_588622.1| glycyl-tRNA synthetase, beta subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123384150|sp|Q1LTU2|SYGB_BAUCH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94219691|gb|ABF13850.1| glycyl-tRNA synthetase, beta subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 699 Score = 512 bits (1318), Expect = e-142, Method: Composition-based stats. Identities = 189/725 (26%), Positives = 336/725 (46%), Gaps = 68/725 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+PA+ + A+ + I L G+ Y ++ + P RL + + ++ Sbjct: 6 FLVEIGTEELPAKELRRLAQYFTANFINELNANGINYNDINWFAAPRRLAIKVNSINSIP 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E+ GP + G A G+ R+ G+ + KG+ + + Sbjct: 66 TKSYMEKRGPAINKAFDAEGKPTPAAIGWARNCGITVNQAERF--TTDKGEWLIYRMLVE 123 Query: 117 KRLIEDVLKTIVPVAIQKVP-WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L ++V A+ K K MRW + + +IRP+++I +L + + Sbjct: 124 TKPVQKLLCSMVYNALTKFSSLTKIMRWGEKN-----YKFIRPVRTITLLL-----DDLV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I ++ I I GHRF I + D+Y LE V+ D E R++ I + Sbjct: 174 IPGNIFGIDSNRIILGHRFMGESVISLLHADYYPNVLLERGRVIADYELRKDTIRRNIEI 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + +G + LLEE+ LV+W V SF+ +L +P E + T++ NQK F Sbjct: 234 MVKKIGGFTKINDKLLEEVTSLVDWPIVLTASFNANFLRIPAEALIYTMENNQKYFPVYD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI V+NI++++ +V GN +V+ +RL D F+ D+ Sbjct: 294 AKGKLLPYFIFVTNIESTNTNQIVV-GNEKVMRSRLADVEFFFNIDR------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + L + V F ++GT ++ R+ +L IA++I D+ RA Sbjct: 340 -------KQKLEDYL--LLLGQVKFQMELGTLLDKSYRLEILASWIAEIISTDIKQAARA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 ++SK DL T++V E+PE+QG IG YA L E A +E P +N+PT +S Sbjct: 391 ALISKCDLMTQMVFEYPEIQGIIGMHYATLDGETELVALAQKEQYLPLFSGDNLPTTLVS 450 Query: 475 ITVSLADKLDTLINFWAINEKPSG-SKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 VS+ADK+D L + IN++ + + DP ALRRA LGI+RII+E ++ I L I+ Sbjct: 451 CAVSIADKMDNLAGIFGINQQYTKQANDPLALRRAALGILRIIIEKQLPIDLLSLIDKAV 510 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN--DNLLTIVDLIKH 576 + +I F +RL + + D I A++ L+ ++ Sbjct: 511 FLYNKKLTNTIVVEQIIHFMLNRLLSWYKKQGYSIDTINAVMAVYKPTGKLIHFDARLRA 570 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ E KRIF I+A K I+ E++ L E L I+ Sbjct: 571 VHYLRQIPHAENLT---KRIFNIIA---KHKDLINGEVNFTLLKQPEEVILINSITQLHK 624 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + +Y + L ++ E I FF ++++ +++E+ NRL+++ ++ + LI+ Sbjct: 625 KLILFFEKGKYQEALWELINLREIINTFFSKIIIMTENKELCINRLNIINKVRQLFLIIA 684 Query: 697 NVQKI 701 + + Sbjct: 685 DFSLL 689 >gi|159026323|emb|CAO88900.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 710 Score = 512 bits (1318), Expect = e-142, Method: Composition-based stats. Identities = 189/714 (26%), Positives = 310/714 (43%), Gaps = 71/714 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ +EE+PA A L + L+ E + ++ Y TP RL + + GL Sbjct: 2 DFLLEVGTEELPADFVDSAIAQLQERVSKSLETESLDATAIQVYATPRRLAVLITGLPRE 61 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + EE GP V G A +GF R G+ T D + KG+ P Sbjct: 62 QEARSEEIKGPPVSAAYKNGQITAAGEGFARKQGVST--DAFSIRATDKGEFVYIEKTIP 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++L ++P I ++ + MRW + RP++ +L ++ E ++I Sbjct: 120 GRQTAEILTELIPQWITRLEGRRFMRWGDGD-----LRFPRPIRWLLTLVDGEVLPLELI 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + +T+GHR P + + Y+ L V DP+ R+ I + LA Sbjct: 175 NGS-TTLTSDRLTFGHRILHPQSLAISHPQAYLTSLRSIFVEADPQVRQQIITDQITTLA 233 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + DLL E+ LVE+ +G FD ++L LP E+I + T+Q+ F +T++ Sbjct: 234 KKLQGVAEIPADLLAEVTNLVEYPTAIVGKFDDEFLELPPEVIITVMVTHQRYFPVKTKQ 293 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L+ FI +SN I GN RV+ ARL DA F+ D + Sbjct: 294 G-LSPYFITISNGDP-QKSEIISAGNERVIRARLADARFFYTADCDE------------- 338 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDR 413 PLD + +L+ V F ++GT ++V RI + + I + ++ D ++ Sbjct: 339 -------PLDSFLPQLET--VTFQEELGTMRDKVDRIMEIAQMIVEQLNLDEQSRSDIES 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 +L KADL T++V EFPELQG + ++YA++ E+ I EH PR + +P Sbjct: 390 TAMLCKADLVTQMVYEFPELQGVMAEKYALISGESAVVARGIFEHYLPRNAGDLLPETIT 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 V +AD+LDTL+ + + P+GS DP+ALRRA II II +I L IE Sbjct: 450 GQVVGIADRLDTLVGIFGLGILPTGSSDPFALRRAANAIISIIWSADFNINLLALIEQIA 509 Query: 534 ----------------LILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLL 568 + FF RL+ L D I +DL+ A+L + +NLL Sbjct: 510 QDFVTSHPDKPNPANLIKDFFLQRLQTLLIDDLRIDYDLVNAVLGENDPEYKSRALENLL 569 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKR 626 + + L + + + R ++ + + ++ I +E+ Sbjct: 570 DTRERARFLCQIRQDGQLANIYETVNRSTRLAQKGDLDTTTLEMKGIIDRDLFEQSSEQA 629 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREV 677 Y ++ + + + Y ++ L +I + FFD VLV + V Sbjct: 630 FYDALNALIPETISAREQRDYQRLVTALTAISPVVADFFDGENSVLVMAEKESV 683 >gi|307721215|ref|YP_003892355.1| glycyl-tRNA synthetase subunit beta [Sulfurimonas autotrophica DSM 16294] gi|306979308|gb|ADN09343.1| glycyl-tRNA synthetase beta chain [Sulfurimonas autotrophica DSM 16294] Length = 672 Score = 512 bits (1318), Expect = e-142, Method: Composition-based stats. Identities = 190/716 (26%), Positives = 329/716 (45%), Gaps = 68/716 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K +++ +L++ ++ Y+TP RL ++ + Sbjct: 5 LLIEIGVEELPAVPLLKEMKNIERKYADILEKYSLL-SEFEFYYTPRRLVMWHREFKTGQ 63 Query: 64 PEKIEERLG-P-----RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + EE G P + G KA +GF R G+ K +V Sbjct: 64 DDSAEEFFGAPLAVAYKDGTPTKAAEGFARKCGVSLEELSTANK--GGKEVLYYKKDVAG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++L I+ ++ + + KSMRW + H S+IRP++ + L + ++ Sbjct: 122 KPSAELLPEIIYSWLKSLDFGKSMRWGSLHE-----SFIRPIRWVNVQL-----DDTLVP 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + + IT HR +P+++ Y L+ V L + R IL D + Sbjct: 172 MYMYGVDSSKITRVHRIANFNPVEITGAKDYFETLKNGGVTLFQQEREEKILGDIKAIEK 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + D DL E++ + E +GSFD+ +L LP E+I ++K +Q+ F ++G Sbjct: 232 DNSVNVEIDDDLFAEVVAITENPTALLGSFDEAFLRLPPEVIITSMKEHQRYFPVF-KDG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F++VSN + D + GN RV+ RL D L F+ D N + L+ Sbjct: 291 QLVNKFVVVSNALSDDFSEV-IAGNERVLRPRLADGLFFYDNDLKNGLSTKGLE------ 343 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRAI 415 V F +G+ +++ R + + + D ++RAI Sbjct: 344 ------------------KVAFFKGLGSVADKIEREEKIADALYDMYQPDAKKEDLNRAI 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL +E+V EF ELQG +G YA EN + AI+E P G +P+ +S Sbjct: 386 ELAKADLMSEMVYEFTELQGLMGYYYAKEAGENDAVALAIKEQYLPEGEESELPSTPLSA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----LSQFIED 531 V+++ KLDTL+ +++NE P+GS+DP+ALRRA GIIRI+ E + L + ++ Sbjct: 446 IVAMSIKLDTLLGLFSVNEIPTGSRDPFALRRAVNGIIRIVNEYGFEFDIVKTLKELSKN 505 Query: 532 QN------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + L F +R++ Y + +IEA+L + LL + I LN +S Sbjct: 506 YDAIDLEKLENFILERIRRYYK---VNPSIIEAVLASDERELLALGRKIAALNTLVNSEG 562 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 ++ + KR+ I + L + EAEK LY + + ES Sbjct: 563 FDEVSSTFKRVANITKDI---DLNGDLNVDESLFEEEAEKTLYKRYKEVTSKTYES---- 615 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + D L + +++FFD V+VN +D ++++NR +L+ I IL + +++++ Sbjct: 616 -YEEELDALLGLKPELDLFFDSVMVNAEDDKIKNNRKALVASIYKSILNIADIKEV 670 >gi|152993287|ref|YP_001359008.1| glycyl-tRNA synthetase subunit beta [Sulfurovum sp. NBC37-1] gi|151425148|dbj|BAF72651.1| glycyl-tRNA synthetase, beta subunit [Sulfurovum sp. NBC37-1] Length = 682 Score = 511 bits (1317), Expect = e-142, Method: Composition-based stats. Identities = 194/711 (27%), Positives = 321/711 (45%), Gaps = 48/711 (6%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K ++ +LK + +TP RL L + Sbjct: 5 LLIEIGVEELPAIPLLKIVSNIERSWKDILKNYKLD-NEFEFIYTPRRLVLKHAAMPEKQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E +GP + G KA +GF R G+ + D +V + Sbjct: 64 EDQTIELMGPPIAAAIKDGVPTKAAEGFARKCGVPFEELG--RADNNGREVLYYKKEERG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L+ ++ I + + K MRW + +IRP++ + + ++ I Sbjct: 122 AQTAALLQEMLEKWIASMSFGKMMRWGSRSD-----EFIRPIRWLQVRM-----GDESIP 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 ++L + TY HR ++V ++D Y L+E VLL P+ R IL + L + Sbjct: 172 VELFGVQSDTKTYVHRMVNYDALEVPNIDAYEAILKEGAVLLYPKEREAVILAEFDALEA 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G+ + D+ LL E++ + E + +GSFD+ +L LP E+I ++K +Q+ F G Sbjct: 232 EHGILIERDRALLAEVVAITENPKALVGSFDELFLELPPEVIITSMKEHQRYFPVF-ENG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 + N F++VSN D + GN RV+ RL D L F+K D N + L++ Sbjct: 291 KITNKFVVVSNAYTDDYSKV-IAGNERVLKPRLADGLFFYKNDLRNGLSTDGLEKVQF-- 347 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +D L ++ R + V A + E GK A+L L+DRA+ L Sbjct: 348 -IDGLGSLADKIKREKSIAVRLLALYMDRLEAG-----TGKNSAEL----ERLMDRAVEL 397 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL +E+V EF ELQG +G YA E+ +AI+E P G +PT+ S V Sbjct: 398 AKADLMSEMVYEFTELQGLMGYYYAKALGEDPLVYNAIKEQYMPVGEGAELPTSLFSSIV 457 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--DQNLI 535 +++ KLDTL +++ + P+GSKDP+ALRRA GI+RI+ +N I + IE Sbjct: 458 AMSIKLDTLFGLFSVGKIPTGSKDPFALRRAVNGIVRIVTDNDITFNIDDIIELLKAEYA 517 Query: 536 LFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 F D LK ++ +R D +I A+L ++ I + LNE S+ ++ Sbjct: 518 EFNTDELKDFIIERINKSLDANPSVIAAVLASGERDINEIAKKVAALNEIVSADTFKEQF 577 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + KR+ I + + + L I EAE LY Y Sbjct: 578 STFKRVANI---SKDVDLDGDLSIDISLFKEEAEVALYTAYEKVIHQDFP-----DYKTR 629 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L + ++ +FD V+VN +D ++ NRL + I + ++++I Sbjct: 630 LEALFGLKRELDTYFDDVMVNTEDEALKTNRLHTIGSIYKTFRDIADIKEI 680 >gi|313682490|ref|YP_004060228.1| glycyl-tRNA synthetase beta chain [Sulfuricurvum kujiense DSM 16994] gi|313155350|gb|ADR34028.1| glycyl-tRNA synthetase beta chain [Sulfuricurvum kujiense DSM 16994] Length = 678 Score = 511 bits (1317), Expect = e-142, Method: Composition-based stats. Identities = 211/721 (29%), Positives = 354/721 (49%), Gaps = 72/721 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K D+ + +L++ ++ Y+TP RL L+ + Sbjct: 5 LLIEIGVEELPAVPLLKELADIEKKWVAVLEKNALL-GEFEFYYTPRRLVLWHREFKTRQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++IEE G V G A GF + G++ + +K +V P Sbjct: 64 DDRIEEFYGAPVDIAIKDGTPTPAALGFAKKCGVEFNQLSRAEK--GGKEVLYFSQNIPG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R ++L ++ I+ + + KSMRW + H S+IRP++ + L E+++D Sbjct: 122 RSSIEILGEMIDQWIKSLSFGKSMRWGSNHE-----SFIRPIRWVNVTL-----GEELVD 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 ++L + + TY HR KV S+ HY L+E V L P+ RR +IL + +L Sbjct: 172 MELFGVRSASETYVHRISHFEAKKVNSIHHYFDLLKEGSVDLYPQSRRESILANFAQLEK 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G+ + D+DLL E++ + E +GSFD+ +L LP E+I ++K +Q+ F +EG Sbjct: 232 ENGISIEVDEDLLNEVVAITEHPTPLLGSFDESFLELPPEVIITSMKEHQRYFPVF-KEG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F++VSN D ++GN RV+ RL DAL F++ D + + L+ Sbjct: 291 KLINAFVVVSNALTDDFSKV-IEGNERVLRPRLSDALFFYRNDLKKGLSTAGLE------ 343 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI--DADVALVDRAI 415 VVF +GT E++ R +V+ IA LI + + A +DRA+ Sbjct: 344 ------------------KVVFMNGLGTLAEKIKREKVVASTIANLIYDNINPAHLDRAM 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL +E+V EF ELQG +G YA+ EN AI+E P G +P+ +S Sbjct: 386 DLAKADLMSEMVYEFTELQGLMGYYYALALGENADVATAIKEQYLPTGEESALPSTMLSA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V+++ K+DTLI ++I E P+GS+DP+ALRRA GII+I + ++I + S I+ Sbjct: 446 IVAMSMKVDTLIGMFSIGEIPTGSRDPFALRRAVNGIIKIAVTHQIPLNFSTLIDQLVSI 505 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND---NLLTIVDLIKHLNEF 580 +N+ F +RL + +I+A++ + + ++L I I+ +N Sbjct: 506 YPQGKEYKKNVETFVIERLAGAYV--GVNPSIIQAVVAKDANVELDILEIDRKIRAVNTI 563 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 SS + + KR+ IL E +++ +AE+ LY+ + E Sbjct: 564 ASSDSFVEAFSTFKRVSNILKDEAMDKG---FKVNGTLFENDAERNLYSAAVSAISKSYE 620 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 +++ + D L ++ P++ FFD V+VN +D VR NR +L+ I I + +++ Sbjct: 621 TLEER-----LDALFALKAPLDTFFDNVMVNAEDLSVRANRKALVGMIYAEIYSIADIKN 675 Query: 701 I 701 I Sbjct: 676 I 676 >gi|210633032|ref|ZP_03297632.1| hypothetical protein COLSTE_01540 [Collinsella stercoris DSM 13279] gi|210159319|gb|EEA90290.1| hypothetical protein COLSTE_01540 [Collinsella stercoris DSM 13279] Length = 696 Score = 511 bits (1317), Expect = e-142, Method: Composition-based stats. Identities = 185/734 (25%), Positives = 323/734 (44%), Gaps = 76/734 (10%) Query: 1 MP---DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M DFL EI EE+P+ + A + L +++ L E G+ + ++R +P RL + Sbjct: 1 MASTRDFLFEIGVEEMPSAPLNNAVKQLKVLVAKGLDEAGLSHGDVRIVSSPRRLAALVS 60 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 ++ + E GP G KA +GF R GL + ++D + Sbjct: 61 DVAEATEEIHSVLRGPSAKIAFDADGNPTKAAEGFARKNGLTAAELIR-REDTDGTEYVF 119 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVA 168 A P +L + I ++ WP +S RW + ++RP++ I C+ Sbjct: 120 AEQNTPSEPAAPMLARMAEAVIAQIEWPNYRSQRWGAERAT-----FVRPIRWICCLF-- 172 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + ++++ ++ G T GHR +P +V Y + LE A V L E R + I Sbjct: 173 ---GDDVVEVRYADVVSGRTTRGHRVLSPGEHEVACPAVYEQVLESAHV-LSAERRESVI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 ++ + +G+ + + +E++ L EW V +G FD+++L +P E+I ++ +NQ+ Sbjct: 229 REGIAQVEAELGVHVDTPAKVFDEVVNLCEWPTVLVGHFDEEFLAVPSEIICESMLSNQR 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F T +G L F++VSN + ++ GN RVV ARL DA F+ D Sbjct: 289 YFPTYDAQGNLTRAFVVVSNADPAVS-ETVIDGNERVVRARLYDAKFFYDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--IDA 406 L L++ +RL V F K+GT ++ R+ L IA+ I A Sbjct: 340 ------------LKIDLEEFRSRL--AKVGFQKKLGTVLQKSERMEDLALAIAREARIGA 385 Query: 407 DV-ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 D + RA L+KADL + V EF QG +G YA E AI +H +PR Sbjct: 386 DAASDAQRAAHLAKADLVSSAVVEFTSQQGVMGGYYAAAAGEAPEVAAAIRDHYRPRFAG 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII-----------R 514 + +P V++ADKLDT+ +AI E P+GSKDP+ALRR+ +G++ Sbjct: 446 DALPEGTAGCIVAVADKLDTIAGMFAIGEPPTGSKDPFALRRSAIGVLNILRDRLGCGYE 505 Query: 515 IILENKID------IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 +++ +D + + ++ F R++ D I D + A+ Sbjct: 506 ALVDAALDAYAEQGLEFDKAEVAASVCAFIKGRMEQMARDEKIAPDTVAAVSAGSVTTPA 565 Query: 569 TIVDLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 +L L ++ + + + R + + + E+ L +AE+ Sbjct: 566 HYFELAHALEHARANDRAAFDNLATAYARAAHLA------DASVGCEVDEALL-GDAERV 618 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L I + ++ + + + L ++ EPI+ FFD+V+V +D +R NRL+LL Sbjct: 619 LLETIDAAEASVASALSAQDFPGVISALAALREPIDAFFDEVMVMDEDERLRTNRLALLN 678 Query: 687 YIKNIILIVINVQK 700 + + ++ Sbjct: 679 RFAAVFSGIADLGA 692 >gi|322372433|ref|ZP_08046969.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. C150] gi|321277475|gb|EFX54544.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. C150] Length = 678 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 338/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKPAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ + F +IRP+ +++ +L ++ +DLD +I Sbjct: 132 G-VPEVLASLTFPVSMHWAN-----NTFEYIRPVHTLVVLL-----GDEALDLDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLGHE-VEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGKLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAKQAGLTAEETAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L+E + + Sbjct: 517 DNQAEVLNFIKARVDKMMG--RTSKDIKEAVLAGSNFVVADMLEAANALSEAAKTDGYKA 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ ++ + EK L S Sbjct: 575 AVESLSRAFNLAEKA-----DASVVVNAGLFENDQEKALAQAAESLELTGSASDK----- 624 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V +D +++NRL++L + V ++ Sbjct: 625 --LAQLFALSPVIDAFFDNTMVMAEDEALKNNRLAILASLVAKANKVAAFNQL 675 >gi|296532281|ref|ZP_06895021.1| glycyl-tRNA synthetase beta subunit [Roseomonas cervicalis ATCC 49957] gi|296267397|gb|EFH13282.1| glycyl-tRNA synthetase beta subunit [Roseomonas cervicalis ATCC 49957] Length = 747 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 255/760 (33%), Positives = 371/760 (48%), Gaps = 98/760 (12%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +AAEDLS ++ LK G+ Q +R + P RL L + L + +E G Sbjct: 13 IPARMQARAAEDLSRLMGEALKGAGLAPQGVRVFHGPRRLTLLAE-LPAATEAVQDELAG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTI-----------------------SDCQIKKDPKKGDVY 109 P A +A+ GFL GL + + + KKG Sbjct: 72 PAPEAPDRALAGFLGKLGLGESLVPTLREAAAGAGEGETVLHAEGAVTLVLRREKKGGKL 131 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L +P +L I+P +++ PWPKSMRW S F W+RPLK ILC+ Sbjct: 132 LGRSARPAVPTGALLAEIIPGILRRFPWPKSMRWG----GTSNFVWVRPLKRILCLFDGA 187 Query: 170 DAKEKIIDLDLKEI--PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++ + G+ T GHR +P V + Y L V+LDP R Sbjct: 188 VVPFTLVQGEDDGHGLRSGDRTEGHRILSPGDFAVHNFADYAAQLAARHVVLDPVERAKL 247 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 + + LA+A G+E+V D+ L+ E+ GLVEW +G D ++ LP EL+R T++ NQ Sbjct: 248 VRDGVAALAAAEGVEVVPDEGLVAEVAGLVEWPVPLLGRIDDAFMDLPPELMRTTMRVNQ 307 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F R +G A CF LVSNI A+DGG A+ GN RV+ ARL DA FW D+ Sbjct: 308 RYFALRKPDGTAAPCFALVSNIAATDGGKAVAGGNERVLRARLSDARFFWDLDR------ 361 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 + L+ + +LD VVFHAK+GTQG+RV+R+ L +A + AD Sbjct: 362 --------------KQALESFLPKLD--SVVFHAKLGTQGQRVARLERLAAWLAPKLGAD 405 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 AL RA L+KADL T +V EFPELQG IG+ YAV E+ +AI H +P GP + Sbjct: 406 AALAARAAKLAKADLATGLVGEFPELQGIIGRYYAVKDGEDSRVAEAIAAHYRPAGPGDA 465 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 VP+ ++I V+LADKLD L F+A+ EKP+GS DP+ALRRA LGIIRI+ EN + + L+ Sbjct: 466 VPSEPVAIAVALADKLDQLAGFFAVGEKPTGSGDPFALRRAALGIIRILRENGLRLDLAD 525 Query: 528 FIED----------------------------------------------QNLILFFHDR 541 + + L+ F +R Sbjct: 526 ALAEAFFGFPQAVGSTAEPEFGMAVAQEAMKAGFQPDPKSAHPPMVAAFAAGLLDFLAER 585 Query: 542 LKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 L++ L RHD++ A+L +L+ ++ L F G L +++R IL Sbjct: 586 LRVQLRAEGERHDVLAAVLPAGGADLVRLLARAAALRGFLEGEDGANLLAASRRAANILR 645 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 IE+KK+ E L+ E EK L A + + + ++ + L ++ P+ Sbjct: 646 IEDKKDGPHRPETDAALLVAEEEKALSAALDEALPRARAALAAEDDTAAMAALATLRAPV 705 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + FFD+V+VN + ++R NRL LL +++ I V + KI Sbjct: 706 DAFFDKVVVNDPEAKLRRNRLGLLARLRSAIDQVADFSKI 745 >gi|322374599|ref|ZP_08049113.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. C300] gi|321280099|gb|EFX57138.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. C300] Length = 678 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 333/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQPVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ + F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEEEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGQETK-IQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDSKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLM--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + + +L+ V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SELVEKLN--HVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTAAEGELPESKVGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYSLKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLASSNFVVADMLEAASALVEASKKEDFKS 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + P E EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGTD-----TVDPALFENEEEKALAEAVESLVLSGTAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V +D+ VR NRL++L + + +I Sbjct: 623 QQLEQLFALSPVIDAFFENTMVMAEDQTVRQNRLAILSQLTKKAAKLARFNQI 675 >gi|209542755|ref|YP_002274984.1| glycyl-tRNA synthetase subunit beta [Gluconacetobacter diazotrophicus PAl 5] gi|209530432|gb|ACI50369.1| glycyl-tRNA synthetase, beta subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 686 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 231/707 (32%), Positives = 345/707 (48%), Gaps = 53/707 (7%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +AAEDL ++ L + ++ R + P R+ L L L P G Sbjct: 13 IPARMQARAAEDLVRLVTDAL--APLNPRDARGFSGPRRIALTLT-LDGVVPGTTVAERG 69 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 PR GA +KA+ GF R G+ + ++ P + +P + Sbjct: 70 PREGAPEKALAGFTRKHGVTPADLVL------EDGFWVLNRTVPPVEAATRIAEALPPLL 123 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI--PCGNITY 190 ++ PWPKSMRW S F+W+RPL+ ILC+L E + D + +T Sbjct: 124 RRFPWPKSMRWGEG----SGFTWVRPLRRILCLLDGETVAFSLADGEDDGHGLRADRLTE 179 Query: 191 GHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 GHRF AP V + L VL+D RR I RLA+ GL +V D L+ Sbjct: 180 GHRFTAPGAFAVTDAAAWRDGLRARQVLVDAAERRALIEEGTTRLAAEEGLRIVPDPGLV 239 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQ 310 +E+ GL EW F+G D+ ++ LP E+++++++ NQ+ F +G A F V+N+ Sbjct: 240 DEVAGLTEWPVPFLGRIDETFMDLPREVMQVSMRVNQRYFALINDDGSAAPRFAFVANLL 299 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 DGGA + GN RV+ AR DA HFW D+ ++ L R+ Sbjct: 300 PEDGGALTIAGNERVLRARFADARHFWDLDR--------------------ARTLASRVG 339 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 LD + FHA +G+QG RV RI L +A ++ AD A +RA +L+KADL T +V EF Sbjct: 340 ALD--AITFHAALGSQGARVQRIVRLAGLLAPMVGADPAQAERAALLAKADLTTGMVGEF 397 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +G YA E AI EH PRG + VP +SI V+LADK+D+L F+ Sbjct: 398 PELQGVMGAYYARHDGEADPVATAIAEHYMPRGQNDGVPAAPVSIAVALADKIDSLAAFF 457 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------------SQFIEDQNLIL-- 536 A EKP GS DPYALRRA LG+IRII EN + + L + +L L Sbjct: 458 AAGEKPGGSGDPYALRRAALGVIRIIRENALRLDLVKLFVLAAEALPETLRDAPDLALLP 517 Query: 537 -FFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 F +RL++ L RHD++ AI D ++ ++ L ++ G+ L + + Sbjct: 518 GFVAERLRVQLRAEGARHDILAAISSGNEDSDITRLLARTDALAAMLATDDGQNLLAATR 577 Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 R IL IE++K+ P E+ L + D ++ ++ +R+ Sbjct: 578 RAANILRIEDRKDGPHDGAPDPTLYEQPEERELANALLDVIPAVETTIAAERFEDAMRDA 637 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FFD V VN D ++R NRL LL ++ + +++ + +I Sbjct: 638 ARLRPVLDRFFDAVTVNADRADLRANRLRLLAELRRMTVLIADFSQI 684 >gi|162148115|ref|YP_001602576.1| glycyl-tRNA synthetase beta chain (glycine--tRNA ligas beta chain) (glyrs) [Gluconacetobacter diazotrophicus PAl 5] gi|161786692|emb|CAP56275.1| glycyl-trna synthetase beta chain (glycine--trna ligas beta chain) (glyrs) [Gluconacetobacter diazotrophicus PAl 5] Length = 684 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 231/707 (32%), Positives = 345/707 (48%), Gaps = 53/707 (7%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +AAEDL ++ L + ++ R + P R+ L L L P G Sbjct: 13 IPARMQARAAEDLVRLVTDAL--APLNPRDARGFSGPRRIALTLT-LDGVVPGTTVAERG 69 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 PR GA +KA+ GF R G+ + ++ P + +P + Sbjct: 70 PREGAPEKALAGFTRKHGVTPADLVL------EDGFWVLNRTVPPVEAATRIAEALPPLL 123 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI--PCGNITY 190 ++ PWPKSMRW S F+W+RPL+ ILC+L E + D + +T Sbjct: 124 RRFPWPKSMRWGEG----SGFTWVRPLRRILCLLDGETVAFSLADGEDDGHGLRADRLTE 179 Query: 191 GHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 GHRF AP V + L VL+D RR I RLA+ GL +V D L+ Sbjct: 180 GHRFTAPGAFAVTDAAAWRDGLRARQVLVDAAERRALIEEGTTRLAAEEGLRIVPDPGLV 239 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQ 310 +E+ GL EW F+G D+ ++ LP E+++++++ NQ+ F +G A F V+N+ Sbjct: 240 DEVAGLTEWPVPFLGRIDETFMDLPREVMQVSMRVNQRYFALINDDGSAAPRFAFVANLL 299 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 DGGA + GN RV+ AR DA HFW D+ ++ L R+ Sbjct: 300 PEDGGALTIAGNERVLRARFADARHFWDLDR--------------------ARTLASRVG 339 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 LD + FHA +G+QG RV RI L +A ++ AD A +RA +L+KADL T +V EF Sbjct: 340 ALD--AITFHAALGSQGARVQRIVRLAGLLAPMVGADPAQAERAALLAKADLTTGMVGEF 397 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +G YA E AI EH PRG + VP +SI V+LADK+D+L F+ Sbjct: 398 PELQGVMGAYYARHDGEADPVATAIAEHYMPRGQNDGVPAAPVSIAVALADKIDSLAAFF 457 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------------SQFIEDQNLIL-- 536 A EKP GS DPYALRRA LG+IRII EN + + L + +L L Sbjct: 458 AAGEKPGGSGDPYALRRAALGVIRIIRENALRLDLVKLFVLAAEALPETLRDAPDLALLP 517 Query: 537 -FFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 F +RL++ L RHD++ AI D ++ ++ L ++ G+ L + + Sbjct: 518 GFVAERLRVQLRAEGARHDILAAISSGNEDSDITRLLARTDALAAMLATDDGQNLLAATR 577 Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 R IL IE++K+ P E+ L + D ++ ++ +R+ Sbjct: 578 RAANILRIEDRKDGPHDGAPDPTLYEQPEERELANALLDVIPAVETTIAAERFEDAMRDA 637 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FFD V VN D ++R NRL LL ++ + +++ + +I Sbjct: 638 ARLRPVLDRFFDAVTVNADRADLRANRLRLLAELRRMTVLIADFSQI 684 >gi|241895548|ref|ZP_04782844.1| glycine--tRNA ligase [Weissella paramesenteroides ATCC 33313] gi|241871126|gb|EER74877.1| glycine--tRNA ligase [Weissella paramesenteroides ATCC 33313] Length = 700 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 200/734 (27%), Positives = 333/734 (45%), Gaps = 84/734 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI EE+PA + A L +KE + Y +++ + TP RL + + ++ Sbjct: 7 MANFLLEIGLEEMPAHLVTPAINQLVERAATFMKENRLQYGDIKPFSTPRRLAILISEVA 66 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + + +E GP G KA GF R G+ T K+ K + Sbjct: 67 DKADDLTQEVKGPAKKAAFDKEGNYSKAAQGFARGQGVTTDD--ITFKEFKGNEYIYVTK 124 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +VL I + + +M+W+ F ++RP++ I+ +L + Sbjct: 125 FEAGKPAIEVLSG-FKEVIMSMTFTTTMKWARH-----TFEYVRPIRWIVALL-----DD 173 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ ++ ++ G T GHRF I + Y+ DLE+ V D R+ I++ Sbjct: 174 MVVPFNVVDVDSGRETRGHRFLG-QSINIAQASDYVNDLEKVYVQADASVRKANIVSQID 232 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +LA+ + +D DLLEE+ +VE+ F+G FD +YL LPEE++ +++ +Q+ F Sbjct: 233 KLAAENNWHVEKDADLLEEVNNIVEYPTAFVGRFDSEYLDLPEEVLITSMREHQRFFHVI 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L F+ V N S+ ++ GN +V+ ARLEDA F+ DQ N Sbjct: 293 DDSGALLPYFVSVRNG-NSEHLDNVIAGNEKVLIARLEDAKFFYHEDQKND--------- 342 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVAL 410 +D +L + V FHAK+G+ R + L I Q I Sbjct: 343 -----------IDFYNDKLQV--VSFHAKLGSVANHTKRAQALAAIIGQQISLTSDQQMQ 389 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L E+ + AI EH P +P Sbjct: 390 LARAAEIYKFDLMTGMVGEFDELQGIMGEKYALLFGEDPAVAQAIREHYMPISADGALPE 449 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----LS 526 + + ++LADKLD+L++F+A PSGS DPYALRRA G++ I+ N +P LS Sbjct: 450 SVLGKVLALADKLDSLLSFFAGGMMPSGSNDPYALRRAASGVVNILHANDWHLPIDIILS 509 Query: 527 QFIED----------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + +++ ++I F DR+ + IR+D+I A+ + Sbjct: 510 ELVDEVLADDGHFGLPEEAANNLKSVINDVITFLTDRVVKAMQTEKIRYDVINAVTTGKL 569 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 + + L + + + S R+ ++ + ++P +AE Sbjct: 570 TDTTQMFTSANALLAHSNDQTFREGVESLTRVMRLTSK-----NPTEATVNPALFENDAE 624 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K+LY S+ + ES+ + L + I +FDQ +V V+D V+ NRL+ Sbjct: 625 KQLY---SETSLLVNESLTTDD---LVSSLLGLQPAIAAYFDQTMVMVEDEAVKQNRLAT 678 Query: 685 LQYIKNIILIVINV 698 LQ + N V N Sbjct: 679 LQIVSNEAEKVANF 692 >gi|78184814|ref|YP_377249.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9902] gi|78169108|gb|ABB26205.1| Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9902] Length = 720 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 184/750 (24%), Positives = 309/750 (41%), Gaps = 86/750 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FLLEI +EE+PA +A + L + L E + + ++ + TP RL + + L Sbjct: 4 TFLLEIGTEELPADFARQALDQLRERVPHDLAEARLSHGSISIFGTPRRLVVSIPDLDDR 63 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ EER GP V G A GF + G+ Q +D KG A + Sbjct: 64 QPDLREERKGPPVAQAFKDGVPGPAAIGFAKRCGIDASQLEQ--RDTPKGPCVFATVLTA 121 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +L+ ++P I + + MRW T + RP++ ++ + + ++ Sbjct: 122 GRDGVSLLRELIPTWIDALQGRRFMRWGTGTQ-----RFSRPIRWLVALHGDDVINVEM- 175 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + GHR + + + S D Y++ L++A VL+D + R I + A Sbjct: 176 PGADPVVRSDRYSRGHRLYGNQQLCIASADQYVKTLQKAGVLVDRDERSRLIRASIDQGA 235 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT---- 292 A E L EE++ LVE +V G +++L LP E+I ++ +Q+ Sbjct: 236 EAAEGEANCPDRLFEELVDLVEDPRVLQGQIAERFLQLPPEVISTVMQAHQRYVPLEIPG 295 Query: 293 -------RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 T E VL F+LV+N A I +GN RV+ ARL DA F + D+ Sbjct: 296 LDPDPLRLTAEAVLRPEFLLVANGL-EQASALITRGNERVLGARLADAEFFLEVDRRQAS 354 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 R + V F +G+ +R RI L ++ + Sbjct: 355 ATR----------------------REALSRVTFAEGLGSLRDRCDRIERLTNQLLTDLA 392 Query: 406 AD---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 RA L K DL +++V EFPELQG +G +Y + + E+ A+ EH PR Sbjct: 393 LSDSVAMASRRAAHLCKHDLVSQMVGEFPELQGLMGGKYLLEEGESRDVALAVVEHYLPR 452 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 G + +P+ V+LA++ + L++ +A E+P+GS DPYALRRA G++ I+ Sbjct: 453 GAGDELPSTDAGAVVALAERFELLLSIFAKGERPTGSSDPYALRRAGNGVLLILWNQGWK 512 Query: 523 IPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 + L+ F+ +L R+ L D DL++A+ Sbjct: 513 LDLNVFLAKAVEAWRELFPAFAVDTAQLTSDLSALLRQRITSQLEDDGYAADLVQAVAGD 572 Query: 563 EN------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--I 614 + L + I+ L+ + +R ++ + +S + Sbjct: 573 TVSTTRLLHDPLDVRVRIQLLHGLRDQGRLTAVQAVVQRASRLAEKGDLPLDVLSSTEVV 632 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVN 671 P +EK L+ + Y ++ D+L +E FFD V+V Sbjct: 633 DPSRFESASEKGLFDATERL----NPLAERGAYQELCDVLVESTPALEAFFDGDQSVMVM 688 Query: 672 VDDREVRDNRLSLLQYIKNIILIVINVQKI 701 DD +R NRL+LL ++N + + I Sbjct: 689 ADDPALRMNRLNLLGVLRNQAAVFAQFELI 718 >gi|23099403|ref|NP_692869.1| glycine-tRNA ligase beta chain [Oceanobacillus iheyensis HTE831] gi|81846059|sp|Q8EPY2|SYGB_OCEIH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|22777632|dbj|BAC13904.1| glycine-tRNA ligase beta chain [Oceanobacillus iheyensis HTE831] Length = 692 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 200/729 (27%), Positives = 344/729 (47%), Gaps = 71/729 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L+EI EE+PAR A L L+E + +N+ Y TP RL +++K + Sbjct: 1 MARDVLIEIGLEELPARFIDDAELQLYTKTKQWLEENRISSENVISYSTPRRLAVFVKNM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E+ GP + G KA GF + GL T + ++ K Sbjct: 61 AEKQSSIEEDVKGPALKIAKDEDGNWTKAAQGFTKGQGLTTDD--IVVREVKGISYIYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 R I+++L I+ + + K+MRW + + RP++ ++ ++ Sbjct: 119 KHIEGRPIQELLPE-FKSIIESITFGKNMRWGS-----ETIRYARPIRWLVAMM-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I ++ + N+TYGHRF + +Q Y + L++ V++ + R I+ Sbjct: 168 NEVIPFEIAHVATNNVTYGHRFLG-EEVTIQEPAEYEKTLKDNYVIVKAKDRETLIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +L G E+ D++LLEE+ LVE+ F+G F++ YL +P E++ ++K +Q+ F Sbjct: 227 SKLEREHGFEIPVDQELLEEVRNLVEFPTAFVGKFEEAYLEIPPEVLITSMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++GVL F+ V N + + +GN +V+ ARL DA F+ D Sbjct: 287 -HKKGVLQPYFVGVRNGD-NYHIETVAKGNEKVLRARLADAEFFYNED------------ 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-- 410 L + +D +L VVF K+GT ++V R++ + +I++ + + Sbjct: 333 --------LHQSIDFFQEKL--TKVVFQEKLGTYSDKVERMKQIADRISEKLSLESDDRK 382 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 ++RA +SK DL T +V EF ELQG IG++YA EN + AI+EH +P+ +++P Sbjct: 383 IIERAAEISKFDLMTSMVNEFTELQGIIGEKYANHFGENSATSQAIKEHYQPKHAKDDLP 442 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I VS+ADKLDT+ A+ P+GS+DPY LRR I+RI+ K ++ + + I Sbjct: 443 QTVIGSVVSVADKLDTIAGCIAVGLVPTGSQDPYGLRRQASAILRILHNEKWNLTVEELI 502 Query: 530 E-----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ LI FF R + D+ + D+I A+ + N+ + Sbjct: 503 DIALDVFQKSNVTIMEKTNEELIEFFRLRAVYLMKDKGLEVDVIHAVTDQKLGNVFVSFE 562 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K L++ + + + R+ + E I L E+EK LY Sbjct: 563 KAKELSDKRNDETFKPIQEALVRVLNLSNKVETNEL-----IREDKLETESEKILYTRYL 617 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 D ++ + H Q L + PI FFD +V DD E+R+NRL+L+Q + ++I Sbjct: 618 DIKETYEKQLLHNETKQALATLAQLAAPIHAFFDNNMVMADDLEIRNNRLALIQALTSLI 677 Query: 693 LIVINVQKI 701 L +++KI Sbjct: 678 LPYADLRKI 686 >gi|254441837|ref|ZP_05055330.1| glycyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 307] gi|198251915|gb|EDY76230.1| glycyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 307] Length = 752 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 261/787 (33%), Positives = 378/787 (48%), Gaps = 123/787 (15%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAA DL ++ L + G+ Y + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQAKAAADLQKLVTNGLVDAGLTYAGAGAFCTPRRLALSVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P SP+ EER GP+VGA AIDGF R G+ D +D KG+V+ AV++KP R Sbjct: 61 PESPDTREERKGPKVGAPDGAIDGFCRGAGVS--RDTLEVRDTGKGEVHFAVIQKPGRKA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ AI+ PWPKSMRW + W+RPL SI+CIL E ++ + + Sbjct: 119 ADIIADVLEGAIRSFPWPKSMRWG-----TGSLKWVRPLHSIICILTDE-GGANVVAMSV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP I V S + Y L+ A V+L + R + I ++A A A G Sbjct: 173 DGIAAGNTTLGHRFMAPDKIPVTSFNDYEARLKRAKVILRADERADLIWSEASNQAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDK LL E+ GLVEW V MG+ +L LP E++ ++K +QK F R + G + Sbjct: 233 LELVEDKGLLAEVAGLVEWPVVLMGTIANDFLNLPPEVLTASMKEHQKFFSVRDKSGQIV 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +DGG I+ GN +V+ ARL DA FW+ D A Sbjct: 293 -RFVTVANRETADGGKTILAGNQKVLFARLSDAKFFWENDLRIAKTGGLAWLDA------ 345 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+GT E V R+ L ++IA L+ AD + A +KA Sbjct: 346 -------------LGNVTFHNKLGTVAELVDRMAALSREIAPLVGADPDEAEAAARFAKA 392 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFP+LQG +G+ YA + + A +EH P GP ++VPT +SI V+LA Sbjct: 393 DLSSEMVYEFPDLQGLMGRYYAGEAGLSDAVALAAQEHYSPLGPSDDVPTAPVSIAVALA 452 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP--------------LS 526 +K+D L FWAI+EKP+GSKDP+ALRRA LG+IR+ILE K + L+ Sbjct: 453 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRVILETKRSLNLTFLFGLGLEKQHLLA 512 Query: 527 QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK----------- 575 I F L L D R L+ + +L + ++ Sbjct: 513 ALGGAYENIQFEVAALTKKLADPSYRGSLLTSSREDLERDLPVLKLRMETSMSKLEEYKS 572 Query: 576 -----------------------------HLNEFFSSAKGEKFLLSAKR----------- 595 ++ + + + LL R Sbjct: 573 YLIEVPFDLLAFFHDRLKVYLKDEGVSHDVIDASLAMPRNDDLLLLVNRAKALAAFLKTD 632 Query: 596 -----------IFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 IL+ E K+ E S ++ +AEK L+A + I +M Sbjct: 633 DGVNLIQGFKRANNILSQAEDKDGVEYSYGADIKFADGDAEKALFAALDAADAKIAPAMA 692 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV---------RDNRLSLLQYIKNIILI 694 + + + + PI+ FFD V +N D + R I+ I L Sbjct: 693 AEDFASAMSAMADLRGPIDAFFDTVQINADSELLRRNRLNLLHR---------IRTICLS 743 Query: 695 VINVQKI 701 V +++K+ Sbjct: 744 VADLRKL 750 >gi|157737475|ref|YP_001490158.1| glycyl-tRNA synthetase subunit beta [Arcobacter butzleri RM4018] gi|157699329|gb|ABV67489.1| glycyl-tRNA synthetase, beta chain [Arcobacter butzleri RM4018] Length = 671 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 190/715 (26%), Positives = 345/715 (48%), Gaps = 67/715 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA ++ +L+ ++ + ++TP RL L+ + Sbjct: 5 LLIEIGVEELPAIPFLNELPNIEKKWSDILERNRLLC-DFDFFYTPRRLVLWHREFQVKQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E+ G + G A F G+ KKD KG+V Sbjct: 64 EDSTIEQFGAPIKIAYKDGVPTGAAISFAAKLGIDVS--VLEKKDLGKGEVLYFKQEVIG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L ++ + + + KSMRW++ S+IRP++S+ +L E+I+D Sbjct: 122 SESKTLLNEMINEFVASLNFGKSMRWASRTD-----SFIRPIRSLSVLL-----GEEIVD 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +L + N ++ HR + P Y L+++ V+L P+ RR IL + Sbjct: 172 AELFGVESSNFSFAHRMVSYEPFTYSFAGDYFCKLDKSGVILYPDERRKIILEQMKNIEQ 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +++ D +LLEE++ + E+ +G FD+++L LPEE+I ++K NQ+ F ++G Sbjct: 232 RHNIKIEIDTELLEEVVAITEYPTALIGKFDEEFLELPEEVIVTSMKENQRYFAVY-KDG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N FI+VSN + +D G I+QGN +V+ RL DA+ F+K D N + LK Sbjct: 291 NLTNNFIVVSNAKTNDFG-YIIQGNEKVLRPRLADAMFFYKNDIKNGLSNEGLK------ 343 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-DVALVDRAIV 416 +VF +G+ ++ R + +A + + L+ +A++ Sbjct: 344 ------------------KLVFVEGLGSMYDKCEREAKIASYLANTFEVKEKELIQKAVM 385 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 LSKADL +E+V EF ELQG +G YA + E+ A++E P G +P+N S Sbjct: 386 LSKADLMSEMVYEFTELQGLMGYYYAKIAKEDNLVSLALKEQYLPTGEDSELPSNVFSSI 445 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--- 533 V+L++KLD L+ +++ + P+GSKDP+ LRRA GI++I +E+K+ I LS+ I++ + Sbjct: 446 VALSNKLDNLMALFSVGKIPTGSKDPFGLRRAAAGIVKIAMEHKLPIDLSKIIDELSTNY 505 Query: 534 -------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 LI FF++RL + +++A+L ++ I + LN S Sbjct: 506 KNLDKKVLIEFFNERLFKIFE---VNPTVLKAVLASGETDIYKISQKLCALNPIVQSDNF 562 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + ++ + KR+ I+ + L I + + EK L+A ++ + +K Sbjct: 563 KDYVATFKRVANIIKD---VDVNSKLLIDEKLFEDKEEKELFAKFNEVQSKT-----YKT 614 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + + L ++ ++ FFD V VN ++ +++ NR +L+ I + ++++I Sbjct: 615 YDEELEALFALKPELDNFFDNVFVNHENEKIKINRKNLVGVIYQGFRKIADIKEI 669 >gi|268680124|ref|YP_003304555.1| glycyl-tRNA synthetase subunit beta [Sulfurospirillum deleyianum DSM 6946] gi|268618155|gb|ACZ12520.1| glycyl-tRNA synthetase, beta subunit [Sulfurospirillum deleyianum DSM 6946] Length = 683 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 191/714 (26%), Positives = 325/714 (45%), Gaps = 53/714 (7%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K + + +L++ + Y+TP RL L+ + Sbjct: 5 LLIEIGVEELPAIPFLKELPTIEKQWLDILEKNALACA-FEFYYTPRRLVLWHESFPTEQ 63 Query: 64 PEKIEERLG-P-----RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 EK EE G P + GA A GF + G++ KD K +V Sbjct: 64 GEKEEEFFGAPLSVALKDGAPTPAALGFAKKCGVEFSEIATAMKDGK--EVLYYKRTIAP 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + + +LK ++ I+ + + KSMRW S+IRP++ C+L ++ + Sbjct: 122 QSSKPLLKEMIEQFIKGLNFGKSMRWGFLEE-----SFIRPIRWFGCML-----GDEHVP 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 L + +Y HR + P Y L E V+L P R ILN + + Sbjct: 172 FSLFGVESTPFSYPHRTISYEPFAYMFAGDYFERLAERGVVLYPSKREEIILNAFKAIEA 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G+ + D +LL E++ + E+ +GSF++++L LP E+I ++K NQ+ F +EG Sbjct: 232 KEGVSIEIDAELLAEVVAITEYPTALIGSFEERFLRLPPEVIITSMKENQRYFPVF-KEG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N FI+VSN + D IV+GN +V+ ARL DA+ F D LK+ Sbjct: 291 KLTNRFIVVSNAISDDY-DLIVKGNEKVLRARLSDAIFFLDNDLKKGLCYEGLKDITY-- 347 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 LD L + R + + A+ + A L++++++ Sbjct: 348 -LDGLGSLMDKTKREKAIALYLSAQYQERLLAEHSRLNPQSLNA--------LMEKSVLY 398 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K+DL +E+V EF ELQG +G YA E+ A++E P +P+ S V Sbjct: 399 AKSDLLSEMVYEFTELQGLMGYYYAKEAGEDELFALALKEQYLPNSEESALPSTLFSAIV 458 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS----------Q 527 +LA KLD+LI ++IN+ P+G+KDPYALRRA GI++I+LE I +S + Sbjct: 459 ALAYKLDSLIALFSINKIPTGNKDPYALRRAVNGIVKIVLEQGIAFDISKDLKALAQGYK 518 Query: 528 FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + L FF +R+ + D+ +I A++ +++ + I+ L + Sbjct: 519 AFDFALLESFFLERMYQFF---DVNPSIISAVISSGERDIVRLSLKIQALATMVQDDGFK 575 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + + KR+ I+ + +L I+ E L+ S +++ + Sbjct: 576 EMFSTFKRVANIIKN---MDMNQTLSINQALFENAYETALFDAFSAVNAK-----NYESF 627 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D L ++ I+ FFD V+VNV++ E+R NR +L+ I + ++++I Sbjct: 628 EAHLDALFALKPHIDAFFDNVMVNVENPELRANRQNLIGSIYTAFKSIADIKEI 681 >gi|306825538|ref|ZP_07458877.1| glycyl-tRNA synthetase beta subunit [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431899|gb|EFM34876.1| glycyl-tRNA synthetase beta subunit [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 678 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 199/713 (27%), Positives = 334/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E+++ Sbjct: 75 AKKIALDGDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQPVENIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ + F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGQETK-IQSALSYEEDLRAQFVIADPREREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQIAVLLAEKAGLSVDETIDLARAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +KI +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSADGALPESKIGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYTLKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ + L E + Sbjct: 517 GNKAEVMDFIKARVDKMMGS--TPKDIKEAVLASSNFVVADMLEAVSALVEASKEENFKS 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E S + E EK L + S Sbjct: 575 SVESLSRAFNLSEKAEG-----SETVDSALFENEEEKALAEAVESLVLSGTAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V DD+++R NRL++L + + +I Sbjct: 623 QQLEQLFALSPIIDAFFENTMVMTDDQDIRQNRLAILSQLTKKAAKLARFNQI 675 >gi|315612872|ref|ZP_07887783.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis ATCC 49296] gi|315314982|gb|EFU63023.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis ATCC 49296] Length = 678 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 333/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENHLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQPVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ + F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-GVLKSLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 DRVSRGHRFLGQETK-IQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A G ++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNAEHLGNV-IKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSADGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I +++ I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMNELIDSLYNLKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLASSNFVVADMLEAASALVEAGKKEDFKS 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + P E EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGTD-----TVDPALFENEEEKALAEAVESLVLSGTAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V D++++R NRL++L + + +I Sbjct: 623 QQLEQLFALSPVIDAFFENTMVMTDNQDIRQNRLAILAQLTKKAAKLARFNQI 675 >gi|292572510|gb|ADE30425.1| Glycyl-tRNA synthetase beta chain [Rickettsia prowazekii Rp22] Length = 664 Score = 508 bits (1309), Expect = e-141, Method: Composition-based stats. Identities = 228/702 (32%), Positives = 348/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ + K EE G Sbjct: 13 IPAFMQKNAEEGYLKIFTKIFEENEI-FAKVQVFAGPRRITLHATHVPKVILPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + ++ K Y V + +R +++L I+ AI Sbjct: 72 PSIEAPEIAINGFCKAHNVSKLDLSTKLRNNK--LYYFFVKKTKQRETKEILPKIIIDAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ L + NITYGH Sbjct: 130 NKYSWTKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLRFGHLSTNNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R +++ ++Y L E V+L+ R I LA+A L + +D L+EE Sbjct: 180 RLTNNKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDVCLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LPEE+I ++T+QK F + G A F+ V N + Sbjct: 240 VTGLSEFPVVLLGKIPQKFLELPEEVIVSVMRTHQKYFCLFDKNGSFAPYFLFVINGRFV 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + I+QGN +V++ARL DAL+F+K D ++K L+ R+ +L Sbjct: 300 NT-ELIIQGNEKVLSARLADALYFYKND--------------------IAKTLESRLDKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 V+FH K+G+ E+V RI + + IA D + A L K+DL +++V EFP+ Sbjct: 339 K--SVIFHTKLGSLKEKVDRITDICRYIAP----DNIDLIMAAKLCKSDLVSDMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +NVP+ + ++LADKLD+L+ + Sbjct: 393 LQGIMGYYYAKHEELNEEVAKAIRDHYKPQGLNDNVPSGNAT-LLALADKLDSLVGLIIV 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------------EDQNLILFFH 539 E P+GS DPYALRR LGIIRII+ENK++I I ++I FF Sbjct: 452 GETPNGSGDPYALRRQALGIIRIIIENKLEINFINLISFSVSLYKVSSNSHLDSVISFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y D LI A+L NL+ + L EF G++ L + KR+ I Sbjct: 512 ERAKFYFK-NDYDITLINAVLDL---NLVDTKFKLDTLKEFLVQDVGKQLLNAYKRVSNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + N++I+ + + EK L+ VI I + +K Y + +LL S+ + Sbjct: 568 M-----GNQKITGLVDASLFSTQYEKELFEVIQKISQQIIVIIANKDYQKALNLLSSLLK 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ + V ++ Sbjct: 623 PITSFFDNVLVNDSDPKIAQNRLSLLQNTCEVFDKVAKFCRL 664 >gi|293365102|ref|ZP_06611819.1| glycyl--tRNA synthetase [Streptococcus oralis ATCC 35037] gi|307702190|ref|ZP_07639150.1| glycyl-tRNA synthetase, beta subunit [Streptococcus oralis ATCC 35037] gi|291316552|gb|EFE56988.1| glycyl--tRNA synthetase [Streptococcus oralis ATCC 35037] gi|307624203|gb|EFO03180.1| glycyl-tRNA synthetase, beta subunit [Streptococcus oralis ATCC 35037] Length = 678 Score = 508 bits (1309), Expect = e-141, Method: Composition-based stats. Identities = 199/713 (27%), Positives = 334/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMVAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQPVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ +AF +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWAN-----NAFEYIRPVHTLTVLL-----DEEEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGQETK-IQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--HVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTAAEGELPESKVGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLASSNFVVADMLEAASALVEASKKEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + P E EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGTD-----TVDPALFENEEEKALAEAVESLVLSGAAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V +D+ VR NRL++L + + +I Sbjct: 623 QQLEQLFALSPVIDAFFENTMVMAEDQTVRQNRLAILSQLTKKAAKLARFNQI 675 >gi|330718878|ref|ZP_08313478.1| glycyl-tRNA synthetase subunit beta [Leuconostoc fallax KCTC 3537] Length = 683 Score = 508 bits (1309), Expect = e-141, Method: Composition-based stats. Identities = 195/728 (26%), Positives = 338/728 (46%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M FLLEI EE+PA + AAE L L++ + ++ Y TP RL + L + Sbjct: 1 MAHTFLLEIGLEEVPAHLVTGAAEQLVKRTQAFLEQHRLDVAEIKSYSTPRRLAVQLIDV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +S EE GP G KA GF R G + K Sbjct: 61 AENSASIDEEYRGPSLKIAKDDTGNWSKAAQGFARGKGATPDDFVE------KDGYVFVS 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 D+L I ++++ + M+W+ F ++RP++ ++ + ++ Sbjct: 115 KHISGVPAIDILANIGSEVVEQMKFSTYMKWANFD-----FLYVRPIRWLVALFDSD--- 166 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I+D + ++ G T GHRF + I + + Y L A V+ D R+ I Sbjct: 167 --IVDFSVLDVRSGRTTRGHRFLSSDNIDILNAQSYEETLALAHVVADAHQRKQKIRQQL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A+ L D+DLLEE+ +VEW F GSFD+KYL +P+E++ +++ +Q+ F Sbjct: 225 DDIAAQHQWVLHVDEDLLEEVNNIVEWPTTFSGSFDEKYLAVPDEVLITSMREHQRFFFV 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++ L F+ V N A + ++ GN +V+ ARLEDA+ F++ DQ Sbjct: 285 TDQDQHLLPYFVSVRNGDA-NHLQNVIAGNEKVLIARLEDAVFFYQEDQQ---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 K + M ++ +VFH KIG+ E + R++ L ++A+ D Sbjct: 334 ----------KTIADYMEKVK--KLVFHEKIGSVYEHMQRVKQLAAQLAESFDFTTQQQQ 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R+ + K DL T +V EF ELQG +G+ YA E+ + AI+EH P ++P Sbjct: 382 DLLRSADIYKFDLMTGMVGEFDELQGIMGEHYAKRFGESDAVAAAIKEHYLPVSADGDLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + + ++LADKLD +I+F+A PSGS DPY LRRA GI+RI+ + K I L+ Sbjct: 442 VSDVGAVLALADKLDGIISFFAAGLIPSGSNDPYGLRRAATGIVRILKDKKWHIALADVL 501 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIVDLIK 575 + Q ++ F DR++ D+ IR D+I A +++ I + + Sbjct: 502 ATFIPKNSATEGADLQTILNFILDRVRKIESDKGIRSDIIAAGTQMKSISDIVYIDERVH 561 Query: 576 HLNEFFSSA-KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 L + + + + R+ ++ E+ + L +AE+ LY + + Sbjct: 562 VLAQHAQDDANFREVMETLTRVQKLA-----HGYVAQGEVQVELLENDAEQALYRLTHEL 616 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++ + L ++ + I+ +FD +V VDD +++NRL+ L I +I+ Sbjct: 617 NLDV---LVNEGAEVVYTTLANLTQAIQDYFDNTMVMVDDERIKNNRLTQLSQINRLIMQ 673 Query: 695 VINVQKIV 702 + ++ +IV Sbjct: 674 LGDLNQIV 681 >gi|237743228|ref|ZP_04573709.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 7_1] gi|229433524|gb|EEO43736.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 7_1] Length = 686 Score = 508 bits (1308), Expect = e-141, Method: Composition-based stats. Identities = 198/728 (27%), Positives = 352/728 (48%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A DL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALADLKTNFERKLKNNRIKFDGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ IK D KG+ Sbjct: 62 QEDLDELSIGPSRERAYKNGALTKAGEGFLKAHRIEEEQIEIIKND--KGEYIAFKRFSK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + +PKSMRWS + + RP++ L + +K++ Sbjct: 120 GKPTETILPEILKALVLEETFPKSMRWSDKN-----IRFARPIEWFLALY-----GDKVV 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S++ Y++ + E V++D RR ++ + + Sbjct: 170 DFEIEGIKSSNKSKGHRFFG-KEFEVSSVEDYLKKIRENNVIIDISERRK-MIEEMINNS 227 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F +++ Sbjct: 228 LLEDEKADVDEALLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRYFPILSKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT ++V R + + + + + + + R Sbjct: 330 ----LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ E F +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I A+L + DN+ T +++ Sbjct: 504 LDTLEADKVLKADRAKVEADVLDFLKQRIINVFTDMKYRKDVILAVLDKDADNITTALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E S K + L + KR+ I+ + + I + + EK LY Sbjct: 564 VRVITEKLSKDKMQALLQAVKRVANIMKGNK------DITIKEKLFKTDIEKTLYTDSKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 G I++S+ K Y + L ++ I+ +FD V+V +D+ VRDNR++ L YI N+ Sbjct: 618 VGEEIEKSIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRINQLTYIMNLFD 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 RIAYLNKL 685 >gi|296273209|ref|YP_003655840.1| glycyl-tRNA synthetase subunit beta [Arcobacter nitrofigilis DSM 7299] gi|296097383|gb|ADG93333.1| glycyl-tRNA synthetase, beta subunit [Arcobacter nitrofigilis DSM 7299] Length = 671 Score = 508 bits (1308), Expect = e-141, Method: Composition-based stats. Identities = 201/715 (28%), Positives = 353/715 (49%), Gaps = 67/715 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K ++ +L++ + + ++TP RL L+ + + Sbjct: 5 LLIEIGVEELPAIPFLKELPNIEKKWSDILEKFKLST-DFDFFYTPRRLVLWHREFNLTQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E+ G V G A GF + ++ I + K +V + Sbjct: 64 EDTTVEQYGAPVAIAYKDGKPTGAAIGFAKKCAIEVDDIKTI--NNGKDEVLYFKKEEKG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +D+L ++ I + + KSMRW++ S+IRP++S++ +L E+I++ Sbjct: 122 KASKDLLNEMINEFINALDFGKSMRWASRTD-----SFIRPIRSLIMML-----GEEIVE 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +L + N ++ HR + P Y L++ V+L PE R+ IL+ + S Sbjct: 172 GELYGVKSSNKSFAHRMVSYEPFSFDFAGDYFCKLDKNGVILYPEDRKKIILDQMKDIES 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 L++ D +LLEEI+ + E+ +GSFD+++L LPEE+I ++K +Q+ F +EG Sbjct: 232 QNNLKIDIDPELLEEIVAITEYPTALLGSFDEEFLELPEEVIVTSMKEHQRYFAVY-KEG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FI+VSN + D + IV GN +V+ RL DA+ F+K D NN + LK Sbjct: 291 KLSNNFIVVSNSKTEDF-SFIVAGNEKVLRPRLSDAMFFYKNDLNNGLSNEGLK------ 343 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-DVALVDRAIV 416 ++VF +G+ E+ R + +A++ + + L+ +A++ Sbjct: 344 ------------------NLVFVDGLGSMYEKCEREVKIASYLAEVFEIKEKELLTKAVM 385 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 LSKADL +E+V EF ELQG +G YA NE+ A++E P G ++P+NK S Sbjct: 386 LSKADLMSEMVYEFTELQGLMGYYYAKAANEDKLVFTALKEQYLPDGEDSDLPSNKFSAI 445 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 V+L+ KLD L+ +++ + P+GSKDP+ LRRA GI++I +E+K+++ LS I++ Sbjct: 446 VALSYKLDNLMGLFSVGKIPTGSKDPFGLRRAAAGIVKISMEHKLEVNLSNIIDNLLDTY 505 Query: 532 -----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + LI FF++RL D+ +I+A+L ++ I I LN S Sbjct: 506 SGLKKEKLIEFFNERLFKIF---DVNPSVIKAVLGSGEGDIYKISQKICALNPIVLSDDF 562 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 ++ + KR+ I+ + N +L I + EK LY + + Sbjct: 563 KESSTTFKRVANIIKDIDVNN---TLNIDESLFEQDEEKDLYETYTLLINK-----KYNT 614 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + D L S+ ++ FFD V VN +D ++ NR +L+ + + ++++I Sbjct: 615 YEEELDALFSLKPKLDKFFDNVFVNHEDENIKTNRKNLIGLVYQAFRNIADIKEI 669 >gi|270293041|ref|ZP_06199252.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. M143] gi|270279020|gb|EFA24866.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. M143] Length = 678 Score = 508 bits (1308), Expect = e-141, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 332/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMATFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQPVESIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ + F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGQETK-IQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEQGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--HVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYDLKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLASLNFVVADMLEAASALVEASKQEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + P E EK L + Sbjct: 575 SVESLSRAFNLAEKAEGTD-----TVDPALFENEEEKALAEAVESLVLSGTAG------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V +D++VR NRL++L + + +I Sbjct: 623 QQLEQLFALSPIIDAFFENTMVMAEDQDVRQNRLAILSQLTKKAAKLARFNQI 675 >gi|329122051|ref|ZP_08250659.1| glycyl-tRNA synthetase beta subunit [Dialister micraerophilus DSM 19965] gi|327466858|gb|EGF12374.1| glycyl-tRNA synthetase beta subunit [Dialister micraerophilus DSM 19965] Length = 682 Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats. Identities = 190/729 (26%), Positives = 347/729 (47%), Gaps = 74/729 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LLEI +EE+PA++ E L+ + +K + + +++ Y TP RL + ++ Sbjct: 1 MSKNLLLEIGTEEMPAKIMPGLVEQLNQLANIEMKNARLSFDDVKVYATPRRLAVIIEKS 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S ++ + GP + G +A+ GF +S + I+K K+G+ A Sbjct: 61 SEIQSDENLRKRGPSIKAAFDKEGNPTRALQGFAKSQKVD------IEKIEKEGEYTWAN 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + I++VL I I + + +SM W T +IRP++ ++ + Sbjct: 115 ITNKGKKIQEVLPVIFKNLISNLNFSRSMNWGTEKE-----RFIRPIRWLVAMC-----D 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + GNI+ GHRF A +++++ + Y ++++ V++D + RR I+ Sbjct: 165 EEIIPVEFAHVKSGNISRGHRFLASDHVEIKNAESYKETMKKSFVIVDQDERRQMIIEGL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +++ + L E+K LLEEI LVE+ G D+K+L LP + ++ +Q+ + Sbjct: 225 KKVSEKLNGILWENKGLLEEINYLVEYPTALYGKIDEKFLQLPVPAVVTPMRDHQRYYPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R + G L F+ V N + GN RV+ ARLEDA F+ D+ Sbjct: 285 RNKNGKLMPYFLTVRNGGT-QSLENVKVGNERVLRARLEDAQFFFDEDR----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 K L+ L + + +GT ++ +R+ L + A+ D + Sbjct: 333 ---------KKSLENFRENLKR--INYQEGMGTMLDKANRLSALTELFAKEWKLSDEEAK 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA LSK+DL T +V EF ELQG++GKEYA+L NE + +AI E PR + +P Sbjct: 382 DLKRASYLSKSDLATHMVTEFTELQGEMGKEYALLDNEKETVANAIFEQYLPRFSGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I +SLADKLD L + P+GS+DP+ALRR T+GI+ I+ + KI ++ I Sbjct: 442 KSNIGRALSLADKLDNLTATFLRGLIPTGSQDPFALRRQTIGIVNILNDGKIHWDITSGI 501 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F R+K+ + D I +D+++A+ + ++ ++ Sbjct: 502 KKALDLLSDDEKQKNKVLLQILEFIRQRVKVIMSDLKIDYDIVDAV-SDDMTDIYSVFRK 560 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + E + + R+ I + ++I EK LY + Sbjct: 561 ANAVIEMNVKEE-IELRQVVTRLSHITK------DKNPVKIQESLFEANEEKELYKAYIE 613 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ + Y ++ + L ++ + I F D V+V V++ +V++NR+SLL + N+ Sbjct: 614 IADKLKAECEAHEYIKMFEPLKNLVKYINAFLDSVMVMVENEDVKNNRISLLIEVLNLYK 673 Query: 694 IVINVQKIV 702 + + K+V Sbjct: 674 MWGDFSKLV 682 >gi|11467977|sp|Q9ZCB1|SYGB_RICPR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS Length = 665 Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats. Identities = 228/702 (32%), Positives = 348/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ + K EE G Sbjct: 14 IPAFMQKNAEEGYLKIFTKIFEENEI-FAKVQVFAGPRRITLHATHVPKVILPKEEEIKG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + ++ K Y V + +R +++L I+ AI Sbjct: 73 PSIEAPEIAINGFCKAHNVSKLDLSTKLRNNK--LYYFFVKKTKERETKEILPKIIIDAI 130 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ L + NITYGH Sbjct: 131 NKYSWTKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLRFGHLSTNNITYGH 180 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R +++ ++Y L E V+L+ R I LA+A L + +D L+EE Sbjct: 181 RLTNNKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDVCLIEE 240 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LPEE+I ++T+QK F + G A F+ V N + Sbjct: 241 VTGLSEFPIVLLGKIPQKFLELPEEVIVSVMRTHQKYFCLFDKNGSFAPYFLFVINGRFV 300 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + I+QGN +V++ARL DAL+F+K D ++K L+ R+ +L Sbjct: 301 NT-ELIIQGNEKVLSARLADALYFYKND--------------------IAKTLESRLDKL 339 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 V+FH K+G+ E+V RI + + IA D + A L K+DL +++V EFP+ Sbjct: 340 K--SVIFHTKLGSLKEKVDRITDICRYIAP----DNIDLIMAAKLCKSDLVSDMVGEFPD 393 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +NVP+ + ++LADKLD+L+ + Sbjct: 394 LQGIMGYYYAKHEELNEEVAKAIRDHYKPQGLNDNVPSGNAT-LLALADKLDSLVGLIIV 452 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------------EDQNLILFFH 539 E P+GS DPYALRR LGIIRII+ENK++I I ++I FF Sbjct: 453 GETPNGSGDPYALRRQALGIIRIIIENKLEINFINLISFSVSLYKVSSNSHLDSVISFFE 512 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y D LI A+L NL+ + L EF G++ L + KR+ I Sbjct: 513 ERAKFYFK-NDYDITLINAVLDL---NLVDTKFKLDTLKEFLVQDVGKQLLNAYKRVSNI 568 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + N++I+ + + EK L+ VI I + +K Y + +LL S+ + Sbjct: 569 M-----GNQKITGLVDASLFSTQYEKELFEVIQKISQQIIVIIANKDYQKALNLLSSLLK 623 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ + V ++ Sbjct: 624 PITSFFDNVLVNDSDPKIAQNRLSLLQNTCEVFDKVAKFCRL 665 >gi|39934122|ref|NP_946398.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris CGA009] gi|39647970|emb|CAE26490.1| putative glycyl-tRNA synthetase, beta chain [Rhodopseudomonas palustris CGA009] Length = 776 Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats. Identities = 261/578 (45%), Positives = 352/578 (60%), Gaps = 27/578 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQGKAADDLKRLVTDKLVAEGLVYEGAKAFATPRRLTLTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + +I++DPKKGD Y+A++ KP + Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEAKIQRDPKKGDFYVALIEKPGKPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ +PV ++ PWPKSMRW + A W+RPL SI+ E + ++ ++ Sbjct: 121 IDVIAQFLPVIVRTFPWPKSMRWGARSARPGALQWVRPLHSIIATFGMETEEPDVVHFNV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP V+ + Y L A V+LD R++ IL DA LA A Sbjct: 181 DGIEAGQTTRGHRFMAPDEFSVRRFEDYEAKLFAAKVVLDSARRKDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 ELVED+ LL+E+ GLVEW MGSFDK +L +P+E+IR TI+ NQKCFV G L Sbjct: 241 YELVEDQGLLDEVSGLVEWPVALMGSFDKDFLSIPDEVIRATIRANQKCFVVADPATGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL +NI+ASDGGAAI GN RV+ ARL DA F+ D Sbjct: 301 ANKFILTANIEASDGGAAITAGNERVIRARLSDAKFFYDTD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + D +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 342 -LKTKLEDRLPKFDQ--IVFHEKLGTQAERIARIERLAAEIAPLVGADVEKTKRAAKLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPADRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN---LIL 536 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++LE + I L I++ L+ Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLETGVGISLRVLIQEAYFSVLLA 518 Query: 537 FFHDRLKLYLHD-RDIRHDLIEAILRPENDNLLTIVDL 573 F + ++L + R + D +D Sbjct: 519 FQYGSYYVFLRQLEGFSFATVTCHFRDKEDRFYARLDR 556 Score = 172 bits (436), Expect = 2e-40, Method: Composition-based stats. Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 11/212 (5%) Query: 499 SKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----NLILFFHDRLKLYLHDRDIRHD 554 +KD + LE+ ++ L + + +L+ FF DRLK+ L D+ RHD Sbjct: 565 AKDEKERYSESSVTFASHLEHNYNL-LKELVSPDTLAADLLSFFADRLKVQLRDQGARHD 623 Query: 555 LIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISL 612 L++A+ D++L IV ++ L F ++ G+ L KR ILAIEEKK+ R + Sbjct: 624 LVDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLLAGTKRAANILAIEEKKDGRTFAG 683 Query: 613 EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ---VL 669 + EK L+ I + + ++ + + L ++ ++ FF + + Sbjct: 684 SPDEALMTN-IEKHLWRTIQSTVVEANDHVRNEDFESAMETLSTLRSAVDSFFAKESGIK 742 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN DD+ VR+NRL LL I+ V + KI Sbjct: 743 VNADDKAVRENRLKLLNEIRAATRAVADFSKI 774 >gi|161729085|ref|NP_221197.2| glycyl-tRNA synthetase subunit beta [Rickettsia prowazekii str. Madrid E] Length = 664 Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats. Identities = 228/702 (32%), Positives = 348/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ + K EE G Sbjct: 13 IPAFMQKNAEEGYLKIFTKIFEENEI-FAKVQVFAGPRRITLHATHVPKVILPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + ++ K Y V + +R +++L I+ AI Sbjct: 72 PSIEAPEIAINGFCKAHNVSKLDLSTKLRNNK--LYYFFVKKTKERETKEILPKIIIDAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ L + NITYGH Sbjct: 130 NKYSWTKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLRFGHLSTNNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R +++ ++Y L E V+L+ R I LA+A L + +D L+EE Sbjct: 180 RLTNNKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDVCLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LPEE+I ++T+QK F + G A F+ V N + Sbjct: 240 VTGLSEFPIVLLGKIPQKFLELPEEVIVSVMRTHQKYFCLFDKNGSFAPYFLFVINGRFV 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + I+QGN +V++ARL DAL+F+K D ++K L+ R+ +L Sbjct: 300 NT-ELIIQGNEKVLSARLADALYFYKND--------------------IAKTLESRLDKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 V+FH K+G+ E+V RI + + IA D + A L K+DL +++V EFP+ Sbjct: 339 K--SVIFHTKLGSLKEKVDRITDICRYIAP----DNIDLIMAAKLCKSDLVSDMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +NVP+ + ++LADKLD+L+ + Sbjct: 393 LQGIMGYYYAKHEELNEEVAKAIRDHYKPQGLNDNVPSGNAT-LLALADKLDSLVGLIIV 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------------EDQNLILFFH 539 E P+GS DPYALRR LGIIRII+ENK++I I ++I FF Sbjct: 452 GETPNGSGDPYALRRQALGIIRIIIENKLEINFINLISFSVSLYKVSSNSHLDSVISFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y D LI A+L NL+ + L EF G++ L + KR+ I Sbjct: 512 ERAKFYFK-NDYDITLINAVLDL---NLVDTKFKLDTLKEFLVQDVGKQLLNAYKRVSNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + N++I+ + + EK L+ VI I + +K Y + +LL S+ + Sbjct: 568 M-----GNQKITGLVDASLFSTQYEKELFEVIQKISQQIIVIIANKDYQKALNLLSSLLK 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ + V ++ Sbjct: 623 PITSFFDNVLVNDSDPKIAQNRLSLLQNTCEVFDKVAKFCRL 664 >gi|331266701|ref|YP_004326331.1| glycyl-tRNA synthetase beta subunit [Streptococcus oralis Uo5] gi|326683373|emb|CBZ00991.1| glycyl-tRNA synthetase beta subunit [Streptococcus oralis Uo5] Length = 678 Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 332/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKTAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL IK KG+ Y+ V ++ + +E+++ Sbjct: 75 AKKIALDGDGNFTKAAQGFVRGKGLTVED---IKFREIKGEEYVYVTKEEVGQPVENIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ + F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL V++DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGQETK-IQSALSYEEDLRAQFVIVDPREREQMIVDQIKAIEAEHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--HVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEIPAVAAAIREHYMPTAAEGELPESKVGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + ++++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLASSNFVVADMLEVASALVEASKKEDFKS 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + E EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGSD-----AVDSALFENEEEKALAEAVESLVLSGTAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V +D+ VR NRL++L + + +I Sbjct: 623 QQLEQLFALSPVIDAFFENTMVMAEDQTVRQNRLAILSQLTKKAAKLARFNQI 675 >gi|254302499|ref|ZP_04969857.1| glycine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322691|gb|EDK87941.1| glycine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 686 Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats. Identities = 196/728 (26%), Positives = 349/728 (47%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKNNFERKLKNNRIKFSGVRTYGTPRRLVLVADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ IK D KG+ Sbjct: 62 QEDLDELNIGPSRERAYKDGALTKAGEGFLKAHRIEEEQIEIIKND--KGEYIAFKRFSK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + + KSMRWS + RP++ L + K++ Sbjct: 120 GKPTETILPEILKALVLEETFQKSMRWSD-----KTIRFARPIEWFLALYGG-----KVV 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S++ Y++ ++E V+++ RR I + Sbjct: 170 DFEIEGIKSSNKSKGHRFFG-KEFEVSSVEDYLKKIKENNVIINISERRKMIEEMISKSL 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + D+ LL+E+ LVE+ +G+F +++L +P+E++ +++K +Q+ F ++ Sbjct: 229 LEDE-KADVDEGLLDEVTNLVEYPFAIVGNFSEEFLEVPQEVLIISMKVHQRYFPILNKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT ++V R + + + + + + R Sbjct: 330 ----LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVGKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIVR--EFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ EF +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGLIPTGSKDPFALRRTALGIVNIIINANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I A+L + DN+ T +++ Sbjct: 504 LDALEADKVLKTDRVKVEADVLDFLKQRIINVFTDMKYRKDVILAVLDKDADNITTALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E S K + L + KR+F I+ + + I + + EK LY Sbjct: 564 VRVITEKLSKDKMQALLQAVKRVFNIMKGSK------DVTIKEKLFKTDIEKTLYTESKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 G ++++ K Y + L ++ I+ +F+ V+V +D+ VRDNR+ L YI N+ Sbjct: 618 VGEEAEKAIKEKEYADYFEKLFTLVPTIDKYFETVIVMDEDKNVRDNRIGQLTYIMNLFG 677 Query: 694 IVINVQKI 701 + ++ K+ Sbjct: 678 KIASLNKL 685 >gi|86609951|ref|YP_478713.1| glycyl-tRNA synthetase subunit beta [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558493|gb|ABD03450.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. JA-2-3B'a(2-13)] Length = 730 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 189/750 (25%), Positives = 319/750 (42%), Gaps = 79/750 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLE+ EE+PA A E + L E + + M+ + TP RL + L+GL Sbjct: 1 MVAYLLEVGCEELPASFVDSALEQWRTGIPASLAEAHLQAEQMQLFGTPRRLAVLLQGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP V G A + F + G+ S + KG AV R Sbjct: 61 TQQPDRTLEVKGPPVQVAYQDGQLTPAGEKFAQKQGVDPGSLEI--RQVGKGSFVFAVQR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK-- 172 R VL+ + P I + + MRW+ + RP++ ++ + + Sbjct: 119 VRGRPTAAVLQELAPAWITNLSGERLMRWACGD-----LKFPRPIRWLVSLWDDQVLPLL 173 Query: 173 -EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + + G ++ GHR + ++ + Y++ ++EA V DP R I + Sbjct: 174 LPTHEGNTMPGLVAGRVSRGHRVLGSQQVTLERAESYVQQMQEAGVSPDPAVREAYIQAE 233 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA V E LL E++ LVEW +G F+ ++L LP +I + +Q+ F Sbjct: 234 VTKLARQVNGEAQIPAPLLREVVQLVEWPTAVLGRFEPEFLRLPPAVIETVMIIHQRYFP 293 Query: 292 TRTREG--VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 R L FI +SN I GNSRVV ARL DA F++ D+ Sbjct: 294 VRDGRDPQKLLPYFITISNGDPGQS-ERIGAGNSRVVRARLSDARFFYEEDRRI------ 346 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 PL QR+ RL V F +G+ ++V RIR + + IA ++ D Sbjct: 347 --------------PLAQRVERLQ--AVTFAEGLGSMRDKVERIRHISRLIAAALNLDAQ 390 Query: 410 ---LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 LV+R L KADL T++V EFPELQG +G +YA E + + IE+H P G + Sbjct: 391 EQALVERTAYLCKADLVTQMVYEFPELQGIMGADYARQDGEPEAVAEGIEQHYWPLGAGD 450 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +PT V AD+LDTL+ + + P+GS D +ALRRA ++ + + + Sbjct: 451 ALPTALTGRVVGWADRLDTLVGMFRLGRIPTGSSDRFALRRAANSLVLVAWDAGWTFDFN 510 Query: 527 QFIED-------------QNLILFFHDRLK-LYLHDRDIRHDLIEAILRPEND------- 565 ++ + L F R++ L ++ I +DL+ A++ Sbjct: 511 LLLQSVVQDYAFGDVHTLRALQEFLAQRIQTLLQEEKRIDYDLVRAVVGDPESVKTEDPQ 570 Query: 566 ----------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK--KNREISLE 613 NL + ++L ++ + + R ++ A + + + Sbjct: 571 KAELTMRALGNLPLTLLRAEYLQHLRATGELADLYPTLNRCARLAAQGDLDYAVVDPAAA 630 Query: 614 ISPQYLLLEAEKRLYAVISDF-GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNV 672 + P L AE+ LY ++ ++ + + + L + + FF+ VLV Sbjct: 631 VDPDQLQEAAERELYEACQKVYRLGVEPALQ-GDFVPLVEALQAAAPQVAQFFEAVLVMD 689 Query: 673 DDREVRDNRLSLLQYIKNIILIVINVQKIV 702 D R +RL+LL ++N ++ ++ +V Sbjct: 690 PDPGRRASRLNLLGVLRNQSRLLGDMGAVV 719 >gi|312866358|ref|ZP_07726576.1| glycine--tRNA ligase, beta subunit [Streptococcus downei F0415] gi|311098052|gb|EFQ56278.1| glycine--tRNA ligase, beta subunit [Streptococcus downei F0415] Length = 679 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 193/713 (27%), Positives = 334/713 (46%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK+ + + +++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMAAFLKDNRLSFDSIKTFSTPRRLAVRVMGLADKQEDLSEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T I+ KG+ Y+ V ++ + E VL Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGLTTDD---IEFRQVKGEEYVYVTKQEAGQPAEAVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W++ ++F +IRP+ ++ +L ++ +++D +I Sbjct: 132 G-VPEVLNSLTFPVSMHWAS-----NSFEYIRPVHTLTVLL-----DDQALNMDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF ++ + D Y DL + V+ D + R+ I+ + + + + Sbjct: 181 GRVSRGHRFLGQET-QICTGDSYEDDLRKEFVIADSQERQGMIVEQIKAVEAEQNVSVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMG FD+KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DPDLLNEVLNLVEYPTAFMGHFDEKYLEVPEEVLVTSMKNHQRYFVVRDQSGQLLPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW DQ + Sbjct: 300 VRNG-NEHYLENVIKGNEKVLVARLEDGEFFWHEDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDRAIVLSKADL 422 +A+L V FH KIG+ E ++R ++ +A+ + + +DRA + K DL Sbjct: 339 ADLVAKLS--HVTFHEKIGSLSEHMARTSLIADYLAKTVGLTADETKDLDRAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLDGEEAPVATAIREHYLPDSADGVLPQTKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDTL++F+++ PSGS DPYALRRAT GI+RI+ +P+ Q +++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDSFGWAVPMDQLVDNLYDLSFDSLTY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 Q ++ F R+ + + D+ EA+L + ++ + L + + Sbjct: 517 AHKQEVMDFIAARVDKMMGS-GVSKDIREAVLAGSTFVVPQMLAAAQALQAASQADNYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R+F + + ++P + EK L ++D Sbjct: 576 AVESLSRVFNLAEKA-----PADVAVNPSLFENDQEKALAQSLADLQL-------SDDVK 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ I+ FFD +V DD +++NRL+LL + V K+ Sbjct: 624 ENLTQFFALSPVIDAFFDNTMVMSDDETLKNNRLALLSELAKKARTVAAFNKL 676 >gi|296114875|ref|ZP_06833523.1| glycyl-tRNA synthetase, beta subunit [Gluconacetobacter hansenii ATCC 23769] gi|295978581|gb|EFG85311.1| glycyl-tRNA synthetase, beta subunit [Gluconacetobacter hansenii ATCC 23769] Length = 686 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 223/683 (32%), Positives = 343/683 (50%), Gaps = 53/683 (7%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +AAEDL +L L + ++ R + P R+ + L+ + P + G Sbjct: 13 IPARMQQRAAEDLQRLLTEALSP--LDPRDARTFAGPRRIAISLE-VDATVPGSTVDERG 69 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 PR A KA+ GF+R G++ + + G ++ P + +P + Sbjct: 70 PRESAPDKALAGFMRKHGVERDALVL-----ENG-FWVLRRDVPAVQAAAHIAVTIPALL 123 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL--KEIPCGNITY 190 ++ PWPKSMRW S+F+W+RPL+ I C+L + + + D + N+T Sbjct: 124 RRFPWPKSMRWGVG----SSFTWVRPLRRIACVLDGQVVPFTLAEGDDNGHGLVAANLTE 179 Query: 191 GHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 GHRF AP V ++ L V RR I RLA+ GL +V D L+ Sbjct: 180 GHRFTAPGAFAVTGTQDWLSGLRARQVEPCAVARRTTIAEGVARLAAEEGLGVVSDPALI 239 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQ 310 +E+ GL EW F+G D +++ LP E+++++++ NQ+ F R +G A F V+N++ Sbjct: 240 DEVAGLTEWPVPFLGQIDDEFMTLPPEVMQVSMRVNQRYFALRNADGSAAPRFAFVANME 299 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 SDGGA + GN RV+ AR DA HFW D+ LD R+A Sbjct: 300 PSDGGALTIAGNERVLRARFADARHFWDLDRT--------------------HTLDSRVA 339 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 +LD +VFHA +G+QGERV RI L IA ++ AD +RA +L KADL T +V EF Sbjct: 340 QLDR--IVFHASLGSQGERVRRIVRLAGLIAPMVGADTKQAERAALLCKADLTTGMVGEF 397 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +G YA E+ + DAI H PRG + VP +SI V+LADK+D+L+ F+ Sbjct: 398 PELQGTMGAYYARHDGEDSAVADAIGAHYMPRGQHDGVPHAPVSIAVALADKIDSLVAFF 457 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN---------------LI 535 A EKP GS DPYALRRA LG+IRII EN + + L++ L Sbjct: 458 AAGEKPGGSGDPYALRRAALGLIRIIRENHLRLDLAEIFVMAAHGLPENLRLAPDLDLLP 517 Query: 536 LFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 F +RL++ L + RHD++ A+ D ++ ++ L + ++ G L + K Sbjct: 518 QFVAERLRVQLRNEGARHDILAAVSVGNTDTDITRLLARSDALADMLATEDGRNLLAATK 577 Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 R IL IE++K+ P + E+ L ++ ++ ++ +R+ + Sbjct: 578 RAANILRIEDRKDGPHEGAPDPALYAQDEERALADALAHTIPAVESAISEERFADAMRDV 637 Query: 655 HSICEPIEIFFDQVLVNVDDREV 677 + ++ FF+ V VN +D + Sbjct: 638 AHLRPVLDRFFEDVTVNAEDAAI 660 >gi|116491024|ref|YP_810568.1| glycyl-tRNA synthetase, beta subunit [Oenococcus oeni PSU-1] gi|122276794|sp|Q04F69|SYGB_OENOB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116091749|gb|ABJ56903.1| glycyl-tRNA synthetase beta chain [Oenococcus oeni PSU-1] Length = 689 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 209/736 (28%), Positives = 352/736 (47%), Gaps = 83/736 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D+LLEI EEIPA + ++ L + + + Y+ ++ + TP RL + + LS Sbjct: 1 MADYLLEIGLEEIPAHLVTESENQLIERIKNFFSDNLLDYKKIQTFSTPRRLAVLVHDLS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 +S K EE GP + G +A +GF RS G D + G VYL Sbjct: 61 NYSQSKDEELRGPSLKVAKDESGNWSRAAEGFARSQGTSPAE-----FDERDGYVYL-NK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++LK I ++K+ + M+W+ ++RP++ ++ +L + Sbjct: 115 HIEGVSAEEILKKIGIEVVEKMKFSTYMKWADFK-----LEYVRPIRWLVSLLDS----- 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 KI+ + ++ T GHRF + I + Y L A V++D + R+N+I N Sbjct: 165 KIVPFQILDVKADRFTRGHRFLSGGKISISEAGDYEETLNNAYVIVDAKVRKNSIRNQIR 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++A L D DLLEE+ +VE+ F G FD KYL LPE ++ +++ NQ+ F Sbjct: 225 KIADTNDWNLHVDPDLLEEVNNIVEYPTAFAGVFDDKYLNLPEIVLTTSMRDNQRFFYVT 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G + FI V N S+ +V+GN +V+ ARLEDA F++ DQ Sbjct: 285 NKQGKILPHFISVRNGD-SNQIENVVKGNEKVLVARLEDAEFFFEEDQ------------ 331 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 +D M + + +VFH KIGT E + R+ + +A + D + Sbjct: 332 --------KHNIDFFMKKAER--LVFHEKIGTMTEHMKRVEKIAALLANQLAFNDQEKKD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG + YA + EN + C A+ E P ++P Sbjct: 382 LKRAANICKFDLTTAMVGEFAELQGTMAGIYAKIFGENQTVCQALSEQYLPTSSEGDLPK 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +K+ ++LADKLDTL +F+A PSGS DPY LRRA LGI+RII + K + +S+ + Sbjct: 442 SKVGAMLALADKLDTLFSFFAAGIIPSGSNDPYGLRRAALGIVRIIGQQKWNFSVSKLLH 501 Query: 531 -----------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + +I FF DR++ D IR+DL++A N+ + Sbjct: 502 SLKTAVDKHEDGFLIDFADTKEISRKVIEFFLDRIRQQSSD--IRYDLLDASTGKVNEGI 559 Query: 568 LT-IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + I ++ L + + + R+ + + ++EI P+ + +EKR Sbjct: 560 INYIFKRVRILASHVADPDFRDVIEALTRVQNLAEKNKS-----NVEIDPELFVTNSEKR 614 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY + D + + H + L S+ EPI +FD+ ++ + +++NR++ + Sbjct: 615 LYQLTKDKDPIV--LLSKGD-HTVYQFLASLKEPINNYFDENMIMDKNPIIKNNRVAQIN 671 Query: 687 YIKNIILIVINVQKIV 702 + N+I + +++K+V Sbjct: 672 LLNNLISSLGDLRKVV 687 >gi|299139033|ref|ZP_07032210.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX8] gi|298599187|gb|EFI55348.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX8] Length = 698 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 189/718 (26%), Positives = 325/718 (45%), Gaps = 62/718 (8%) Query: 8 IYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKI 67 + E++ K A+ + + L + +R Y TP RL + + G+ + Sbjct: 17 LGREQLIDAALAKEAQSVEP-VTAFLVKH-----VIRSYSTPRRLAVLVCGVREQQADIT 70 Query: 68 EERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 E+ GP V G A + F R +G+ I KG+ A K R Sbjct: 71 EDVTGPAVKIAFKDGVATPAAEAFARKSGVAVAELRTI--TTPKGEYLAATSVKKGRSAA 128 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 +VL + +P I + W K+M W ++RP+ I+C+L + ++ L Sbjct: 129 EVLASELPKEIAGIYWAKNMYWRPGK----PERFVRPVLWIVCLL-----GDAVVPLTFA 179 Query: 182 EIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV- 239 G +YGHR + P ++ + + Y+ LE V+ D E RR I + AV Sbjct: 180 GRMAGRASYGHRVLSSGEPFEIVAPESYLAQLEGEYVIADVEARRQTIRKALDHVTRAVE 239 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G ED++L++ + L EW V +G F+ YL LPEE++ ++ +QK F G L Sbjct: 240 GARWREDEELVDSVTHLTEWPAVLLGGFESAYLELPEEVLVTVMRDHQKYFAVEDAAGKL 299 Query: 300 ANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 A F+ + NI + I++ GN RV+ AR DA FW+ DQ Sbjct: 300 APHFLAILNIALDETNEPIIKQGNERVLRARFNDARFFWEFDQR---------------- 343 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-----DVALVDR 413 PL +R+ L+ +V F +G+ + R+R L ++A++ + D + VD Sbjct: 344 ----TPLAERVKLLE--NVTFQKDLGSYAAKSERVRSLAAQLAKVASSRGATVDASAVDE 397 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+K DL TE+V+EF ELQG IG YA Q + + DAI + P + +P + Sbjct: 398 AAKLAKTDLTTELVKEFTELQGVIGGLYAKAQGVSATVADAIYDQYLPASAKDAIPRSFE 457 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 + LAD++DT+ +A+ +P+GSKDP+ALRRA ++RI+ E+ + + L+ Sbjct: 458 GALLGLADRIDTITGMFALGMEPTGSKDPFALRRAANSVVRILAESGLPLTLADVFGVAQ 517 Query: 534 --------LILFFHDRLKLYLHD-RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 L FF +R++ YL + R +D+++A++ ++L V + + Sbjct: 518 SEAEVAAKLQAFFAERIEFYLREGRGQAYDVVKAVVAAGAEDLRDAVARAEAVTAVRGGE 577 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + KR+ IL + K I + L +EK L + + ++ Sbjct: 578 DFIAVSAAFKRMKNILDQAQAKGESIPASVDTGLLSDASEKALESTGGRVASDVEALRAK 637 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++Y + + S+ + FF++V+V + ++R NRL+LL + + +IV Sbjct: 638 RQYSEALTQVASLRPVVNEFFERVMVMAPEADIRANRLALLARTVADFSRIADFSEIV 695 >gi|313891695|ref|ZP_07825302.1| glycine--tRNA ligase, beta subunit [Dialister microaerophilus UPII 345-E] gi|313119973|gb|EFR43158.1| glycine--tRNA ligase, beta subunit [Dialister microaerophilus UPII 345-E] Length = 682 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 190/729 (26%), Positives = 345/729 (47%), Gaps = 74/729 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LLEI +EE+PA++ E L+ + +K + + +++ Y TP RL + ++ Sbjct: 1 MSKNLLLEIGTEEMPAKIMPGLVEQLNQLANIEMKNARLSFDDVKVYATPRRLAVIIEKS 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S ++ + GP + G +A+ GF +S + I+K K+G+ A Sbjct: 61 SEIQSDENLRKRGPSIKAAFDKEGNPTRALQGFAKSQKVD------IEKIEKEGEYTWAN 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + I++VL I I + + +SM W T +IRP++ ++ + Sbjct: 115 ITNKGKKIQEVLPVIFKNLISNLNFSRSMNWGTEKE-----RFIRPIRWLVAMC-----D 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + GNI+ GHRF A +++++ + Y ++++ V++D + RR I+ Sbjct: 165 EEIIPVEFAHVKSGNISRGHRFLASDHVEIKNAESYKETMKKSFVIVDQDERRQMIIEGL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +++ + L E+K LLEEI LVE+ G D+K+L LP + ++ +Q+ + Sbjct: 225 KKVSEKLNGILWENKGLLEEINYLVEYPTALYGKIDEKFLQLPVPAVVTPMRDHQRYYPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R + G L F+ V N + GN RV+ ARLEDA F+ D+ Sbjct: 285 RNKNGKLMPYFLTVRNGGT-QSLENVKVGNERVLRARLEDAQFFFDEDR----------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 K L+ L + + +GT ++ +R+ L + A+ D + Sbjct: 333 ---------KKSLENFRENLKR--INYQEGMGTMLDKANRLSALTELFAKEWKLSDEEAK 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA LSK+DL T +V EF ELQG++GKEYA+L NE + +AI E PR + +P Sbjct: 382 DLKRASYLSKSDLATHMVTEFTELQGEMGKEYALLDNEKETVANAIFEQYLPRFSGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I +SLADKLD L + P+GS+DP+ALRR T+GI+ I+ + KI ++ I Sbjct: 442 KSNIGRALSLADKLDNLTATFLRGLIPTGSQDPFALRRQTIGIVNILNDGKIHWDITSGI 501 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F R+K+ + D I +D+++A+ + ++ + Sbjct: 502 KKALDLLSDDEKQKNKVLLQILEFIRQRVKVIMSDLKIDYDIVDAV-SDDMTDIYAVFRK 560 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + E + + R+ I + ++I EK LY + Sbjct: 561 ANAVIEMNVKEE-IELRQVVTRLSHITK------DKNPVKIEESLFEANEEKELYKAYIE 613 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ + Y ++ + L ++ + I F D V+V V++ V++NR+SLL + N+ Sbjct: 614 IADKLKAECEAHEYIKMFEPLKNLVKYINAFLDSVMVMVENENVKNNRISLLIEVLNLYK 673 Query: 694 IVINVQKIV 702 + + K+V Sbjct: 674 MWGDFSKLV 682 >gi|298491727|ref|YP_003721904.1| glycyl-tRNA synthetase subunit beta ['Nostoc azollae' 0708] gi|298233645|gb|ADI64781.1| glycyl-tRNA synthetase, beta subunit ['Nostoc azollae' 0708] Length = 733 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 188/737 (25%), Positives = 313/737 (42%), Gaps = 90/737 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L+ + + + Y TP RL + + GL Sbjct: 1 MPAFLLEVGTEELPASFLSSAIVQWRSRIPQTLEANNLKTETVEVYGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+K EE GP + G GF + G++ D + +KGD + Sbjct: 61 SQQPDKEEEIKGPSAQAAFKDGKPTPGAVGFAKKQGVEL--DAFEIRPTEKGDFVFIQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + ++L + P + + + MRW + + RP++ ++ +L + + Sbjct: 119 TPGRPVAEILTELFPQWVWSLEGKRLMRWGSGDG-----RFSRPIRWLVALLDGDVLPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + + D K + I+ HR P P+ + Y+ L V++ PE R N I Sbjct: 174 LKNGD-KTVKSDRISQAHRVLHPEPVSISHATEYVNTLRSGYVIVSPEERENIITEQVKT 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +G DLLEE LVE+ +G F+ ++L LP E+ + +Q+ F Sbjct: 233 AVQKLGGFTPIYPDLLEETTNLVEYPTAVVGKFEDEFLLLPTEVSTTVMVNHQRYFPVFK 292 Query: 295 --REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L FI VSN + I GN +V+ ARL D F+K D Sbjct: 293 TSENHELLPNFITVSNGDPT-KSDIIAVGNEKVIRARLADGRFFYKAD------------ 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 L+KPL+ + +L+ V F +G+ +V R+ + +I+Q + + + Sbjct: 340 --------LAKPLESFLPQLET--VTFQEDLGSVRAKVERVVNIAARISQQLQLGNNERQ 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA +L KADL T++V EFPELQG +G++YA+ E+ AI EH PR +N P Sbjct: 390 KIQRAALLCKADLVTQMVSEFPELQGTMGEKYALASAEDSEVALAIYEHYLPRYASDNFP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN---------- 519 V+LAD+LDTL++ + + KPSGS DP+ALRRA II+II Sbjct: 450 RTITGKVVALADRLDTLVSIFGLGLKPSGSSDPFALRRAANAIIKIICSQSSDSTHQDYK 509 Query: 520 -KIDIPLSQFIEDQN-----------------LILFFHDRLKLYLHD-------RDIRHD 554 + + L+ +E L FF R++ + +I +D Sbjct: 510 DGLTLDLAGLLEQTATEFAAAFNKDRDSLIKVLQDFFIQRIRTLFQEAEVQIFIDEIDYD 569 Query: 555 LIEAILRPEN--------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK 606 L+ A+L + +LL + D +L + ++ +K + R ++ A Sbjct: 570 LVNAVLGENDPEYTERALQDLLDVRDRALYLQQIRNNGTLDKIYETVNRSTRLAAQGNLN 629 Query: 607 --NREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIF 664 E + + P+ +E Y + + Q + + Y + L I + Sbjct: 630 FQQLEPTAVVKPELFQKSSESAFYNALLELVPQTQAAQRTRNYQILIAALEKIAPTVSKL 689 Query: 665 F---DQVLVNVDDREVR 678 F D VLV + E++ Sbjct: 690 FDGEDSVLVMDLNPEIK 706 >gi|91975701|ref|YP_568360.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris BisB5] gi|91682157|gb|ABE38459.1| Glycine--tRNA ligase [Rhodopseudomonas palustris BisB5] Length = 822 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 257/529 (48%), Positives = 339/529 (64%), Gaps = 23/529 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTEKLVAEGLVYEGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEAKIQRDPKKGDFYIALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV ++ PWPKSMRW + A W+RPL SI+ + + +++ D+ Sbjct: 121 IDVLADILPVIVRTFPWPKSMRWGERSAKPGALQWVRPLHSIVATFGIDTEEPEVVAFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP I V+ + Y L A V+LDP+ R++ IL DA LA A Sbjct: 181 SGIKAGQVTRGHRFMAPDEISVRRFEDYEAKLYAAKVVLDPQRRKDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 ELVED+ LL+E+ GLVEW MGSFD +L +P E+IR TI+ NQKCFV L Sbjct: 241 YELVEDQGLLDEVSGLVEWPVALMGSFDADFLSIPGEVIRATIRANQKCFVVADPATAKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL SNI+ASDGGAAI GN RV+ ARL DA F+ D Sbjct: 301 ANKFILTSNIEASDGGAAITAGNERVIRARLSDAKFFYDTD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + D +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 342 -LKTKLEDRLPKFDQ--IVFHEKLGTQAERIARIERLAAEIAPLVGADVEKARRAARLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ E+ S A E+H KP+GP + VPT+ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAAGEDASVAAACEDHYKPQGPNDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRII+ N + + L F Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIIVTNNLKVRLEPF 507 Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 2/171 (1%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ F DRLK+ L D+ RHDL++A+ D++L IV ++ L F ++ G+ L Sbjct: 650 DLLKFLVDRLKVQLRDQGARHDLVDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLLA 709 Query: 592 SAKRIFQILAIEEKKNREISLEI-SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR IL IEEKK+ + + EK L A I E++ + + Sbjct: 710 GTKRAANILRIEEKKDGRAFDGVPDASLYAQDEEKALAAAIDRARAEATEAVAREDFAAA 769 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ FFD+V VN DD+ VR+NRL LL I+ V + KI Sbjct: 770 MTAMAGLRPAVDAFFDKVTVNADDKAVRENRLKLLGEIRAATRAVADFSKI 820 >gi|307702019|ref|ZP_07639027.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis NCTC 12261] gi|307616664|gb|EFN95853.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis NCTC 12261] Length = 678 Score = 505 bits (1301), Expect = e-140, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 330/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQADLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ + F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEEEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 DRVSRGHRFLGQETK-IQSALSYEEDLRKQFVIADPREREQMIVDQIKAIETEHGVHIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A D +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-DHLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALTFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEASKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + + EK L + S Sbjct: 575 SVESLSRAFNLADKAEGV-----VAVDSALFENDQEKALAEAVESLVLSGTAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L ++ + +I Sbjct: 623 QQLKQLFALSPVIDSFFENTMVMAEDQAVRQNRLAILSHLTQKAAKLARFNQI 675 >gi|290890505|ref|ZP_06553580.1| hypothetical protein AWRIB429_0970 [Oenococcus oeni AWRIB429] gi|290479901|gb|EFD88550.1| hypothetical protein AWRIB429_0970 [Oenococcus oeni AWRIB429] Length = 689 Score = 505 bits (1300), Expect = e-140, Method: Composition-based stats. Identities = 209/736 (28%), Positives = 352/736 (47%), Gaps = 83/736 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D+LLEI EEIPA + ++ L + + + Y+ ++ + TP RL + + LS Sbjct: 1 MADYLLEIGLEEIPAHLVTESENQLIERIKNFFSDNLLDYKKIQTFSTPRRLAVLVHDLS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 +S K EE GP + G +A +GF RS G D + G VYL Sbjct: 61 NYSQSKDEELRGPSLKVAKDESGNWSRAAEGFARSQGTSPAE-----FDERDGYVYL-NK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++LK I ++K+ + M+W+ ++RP++ ++ +L + Sbjct: 115 HIEGVSAEEILKKIGIEVVEKMKFSTYMKWADFK-----LEYVRPIRWLVSLLDS----- 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 KI+ + ++ T GHRF + I + Y L A V++D + R+N+I N Sbjct: 165 KIVPFQILDVKADRFTRGHRFLSGGKISISEAGDYEETLNNAYVIVDAKVRKNSIRNQIR 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++A L D DLLEE+ +VE+ F G FD KYL LPE ++ +++ NQ+ F Sbjct: 225 KIADTNDWNLHVDPDLLEEVNNIVEYPTAFAGVFDDKYLNLPEIVLTTSMRDNQRFFYVT 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G + FI V N S+ +V+GN +V+ ARLEDA F++ DQ Sbjct: 285 NKQGKILPHFISVRNGD-SNQIENVVKGNEKVLVARLEDAEFFFEEDQ------------ 331 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 +D M + + +VFH KIGT E + R+ + +A + D + Sbjct: 332 --------KHNIDFFMKKAER--LVFHEKIGTMTEHMKRVEKIAALLANQLAFNDQEKKD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG + YA + EN + C A+ E P ++P Sbjct: 382 LKRAANIYKFDLTTAMVGEFAELQGTMAGIYAKIFGENQTVCQALSEQYLPTSSEGDLPK 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +K+ ++LADKLDTL +F+A PSGS DPY LRRA LGI+RII + K + +S+ + Sbjct: 442 SKVGAMLALADKLDTLFSFFAAGIIPSGSNDPYGLRRAALGIVRIIGQQKWNFSVSKLLH 501 Query: 531 -----------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + +I FF DR++ D IR+DL++A N+ + Sbjct: 502 SLKTAVDKHEDGFLIDFADTKEISRKVIEFFLDRIRQQSSD--IRYDLLDASTGKVNEGI 559 Query: 568 LT-IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + I ++ L + + + R+ + + ++EI P+ + +EKR Sbjct: 560 INYIFKRVRILASHVADPDFRDVIEALTRVQNLAEKNKS-----NVEIDPELFVTNSEKR 614 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY + D + + H + L S+ EPI +FD+ ++ + +++NR++ + Sbjct: 615 LYQLTKDKDPIV--LLSKGD-HTVYQFLASLKEPINNYFDENMIMDKNPIIKNNRVAQIN 671 Query: 687 YIKNIILIVINVQKIV 702 + N+I + +++K+V Sbjct: 672 LLNNLISSLGDLRKVV 687 >gi|319947574|ref|ZP_08021804.1| glycyl-tRNA synthetase beta subunit [Streptococcus australis ATCC 700641] gi|319746262|gb|EFV98525.1| glycyl-tRNA synthetase beta subunit [Streptococcus australis ATCC 700641] Length = 678 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 201/713 (28%), Positives = 341/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQTDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKPAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ ++F +IRP+ +++ +L ++ +DLD +I Sbjct: 132 G-VPEVLASLTFPVSMHWAN-----NSFEYIRPVHTLIVLL-----GDEALDLDFLDIQS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLGHE-VEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGKLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEETAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ +A+L N + +++ + L+E + + Sbjct: 517 DNQAEVLNFIKARVDKMMG--RTAKDIKDAVLAGSNFVVADMLEAAEALSEAAKTDGYKA 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + + EK L I + S Sbjct: 575 AVESLSRAFNLAEKA-----DASVAVDASLFENDQEKALAKAIEELELAGAASDK----- 624 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V +D V++NRL+LL + V ++ Sbjct: 625 --LAQLFALSPVIDAFFDNTMVMAEDEAVKNNRLALLAGLVAKANAVAAFNQL 675 >gi|307705200|ref|ZP_07642070.1| glycyl-tRNA synthetase beta chain [Streptococcus mitis SK597] gi|307621222|gb|EFO00289.1| glycyl-tRNA synthetase beta chain [Streptococcus mitis SK597] Length = 678 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 332/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEEEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGQETK-IQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEHGVHIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ D V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQIAVLLAEKADLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVATAIREHYMPTSAEGELPETKVGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALTFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEASKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E+ + P E EK L + S Sbjct: 575 SVESLSRAFNLAEKAEEV-----ATVDPALFENEEEKTLAEAVESLVLSGTAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V + VR NRL++L ++ + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAESEAVRQNRLAILSHLTQKASKLARFNQI 675 >gi|307709292|ref|ZP_07645750.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis SK564] gi|307619875|gb|EFN98993.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis SK564] Length = 678 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 329/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEEEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGKETK-IQSALSYEEDLRRQFVIADPREREQMIVDQIKEIEAKHGVSIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLDVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDTFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKSEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEASKKEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + E EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENEEEKTLAEAVESLVLSGTAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V ++ VR NRL++L ++ + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAENEAVRQNRLAILSHLTQKAAKLARFNQI 675 >gi|237741059|ref|ZP_04571540.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 4_1_13] gi|229431103|gb|EEO41315.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 4_1_13] Length = 686 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 192/728 (26%), Positives = 350/728 (48%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + ++ Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKSNFERKLKNNRIKFSGVKTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + G KA +GFL++ ++ IK D KG+ Sbjct: 62 QEDLDELNIGPSRERAYKNGVLTKAGEGFLKAHRIEEEQIEIIKND--KGEYIAFKRFSK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + +PKSMRWS + RP++ L + +K++ Sbjct: 120 GKPTETILPEILKALVLEETFPKSMRWSD-----KTIRFARPIEWFLALY-----GDKVV 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S++ Y++ + E V++D RR ++ + + Sbjct: 170 DFEIEGIKSSNKSKGHRFFG-KEFEVSSVEDYLKKIRENNVIIDISERRK-MIEEMINNS 227 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++ D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F +++ Sbjct: 228 LLEDEKVDVDEALLDEVTNLVEHPFAIVGNFSEDFLEVPQEVLIISMKVHQRYFPVLSKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT ++V R + + + + + + + R Sbjct: 330 ----LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ E F +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKGGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II++ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIIKANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I ++L + DN+ +++ Sbjct: 504 LDALEADKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDVILSVLDKDADNITNALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E S K + L + KR+F I+ + + I + + EK LY Sbjct: 564 VRVITEKLSKDKMQALLQTVKRVFNIMKGSK------DVTIKEKLFKNDIEKTLYTESKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +++++ K Y + L ++ I+ +FD V+V +D+ VRDNR+ L I N+ Sbjct: 618 VEEEVEKAIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRIGQLTCIMNLFD 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 RIAYLNKL 685 >gi|296110365|ref|YP_003620746.1| glycyl-tRNA synthetase beta chain [Leuconostoc kimchii IMSNU 11154] gi|295831896|gb|ADG39777.1| glycyl-tRNA synthetase beta chain [Leuconostoc kimchii IMSNU 11154] Length = 686 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 198/731 (27%), Positives = 333/731 (45%), Gaps = 76/731 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + ++ + TP RL L ++ Sbjct: 1 MSTFLLEIGLEEMPAHLVTSSEAQLIERTKAFLAEHRLSVGEIKPFSTPRRLAFQLVDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G + + Sbjct: 61 LESESLSEEKRGPAINRAKDEQGGWSKAAQGFARGQGATPEDFEERE------GYVWLTK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P +L I + ++ + M+W+ ++F ++RP++ ++ +L E Sbjct: 115 HTPGEAAATILAKIGDEVVSQMKFTTYMKWAN-----NSFLYVRPIRWLVALL-----DE 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 I+D + E+ G T GHRF + +++ + Y+ L+ A VL+D E R++ I Sbjct: 165 AIVDFSILEVSTGRFTRGHRFLSHEHVEISHANRYVDTLKAAYVLVDAEGRKSEIRRQLE 224 Query: 234 RLASAVGLELVEDKD----LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A+ L D D LLEE+ +VEW F GSFD+KYL +P+ ++ +++ +Q+ Sbjct: 225 MIATQNHWLLQLDVDAAQNLLEEVNNIVEWPTAFSGSFDQKYLEVPDAVLMTSMREHQRF 284 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L F+ V N A + + ++ GN +V+ ARLEDA F+ DQ Sbjct: 285 FYVTDQSGALLPNFLSVRNGNA-ENLSNVIAGNEKVLVARLEDAEFFYHEDQQ------- 336 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-- 407 K + MA++ +VFH KIGT E + R+ L +A ++ D Sbjct: 337 -------------KTIADSMAKVK--KLVFHEKIGTVYEHMQRVGKLAADLAASLNFDDS 381 Query: 408 -VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A + RA + K DL T +V EF ELQG +G+ YA L EN + AI+EH P Sbjct: 382 KKADLARASEIYKFDLMTGMVGEFDELQGIMGEHYAKLFGENAAVAVAIKEHYMPTSAHG 441 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +V T + +++ADKLD +I F++ N P+GS DPY LRRA GI+R + K + L Sbjct: 442 DVATTDVGAVLAIADKLDAIITFFSANLMPTGSNDPYGLRRAATGIVRTLENKKWHVALK 501 Query: 527 QFIEDQ--------------NLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIV 571 ++ ++ F DR++ DR IR D++ A + +++ I Sbjct: 502 PVLDVFVTNTGEVTQNADLTAVLAFIFDRVRKIALDRGIRQDIVSAGTALVGSTDVVYIA 561 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D + L + + + S R+ ++ + + + +AE +LYA Sbjct: 562 DRTQVLAKHADDVNFREVIESLTRVSRLAVKQISHDL-----VDENLFENDAESKLYAAS 616 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 E + + L ++ PI +FD+ +VNVD++ +++NR + L I + Sbjct: 617 KAIDLQDVEGQGGE---AVYQALAALQMPIANYFDETMVNVDNQTIKNNRYAQLNLIHRL 673 Query: 692 ILIVINVQKIV 702 + + ++ IV Sbjct: 674 AVGLGDLSNIV 684 >gi|296328736|ref|ZP_06871250.1| glycyl-tRNA synthetase beta subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154071|gb|EFG94875.1| glycyl-tRNA synthetase beta subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 686 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 198/728 (27%), Positives = 348/728 (47%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKSNFEKKLKNNRIKFDGVRTYGTPRRLVLVADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ IK D KG+ Sbjct: 62 QEDLDELSIGPSRERAYKDGALTKAGEGFLKAHRIEEEQIEIIKND--KGEYIAFKRFLK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + + KSMRWS + RP++ L + K+I Sbjct: 120 GKPTEAILPEILKALVLEETFQKSMRWS-----TKTIRFARPIEWFLALYGG-----KVI 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S+++Y++ + E V++D RR ++ + + Sbjct: 170 DFEIEGIKSSNKSKGHRFFG-KEFEVSSVENYLKKIRENNVIIDISERRK-MIEEMINNS 227 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + DK LL+E+ LVE +G+F +++L +P+E++ +++K +Q+ F ++ Sbjct: 228 LLEDEKADVDKALLDEVTNLVEHPFAIVGTFSEEFLEVPQEVLIISMKVHQRYFPILNKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT +V R + + + + + + R Sbjct: 330 ----LKIPLDNNVEKLKT--VVFQKDLGTIYNKVKRCEKIAEFLVGKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIVR--EFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ EF +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D I A+L ++DN+ T +++ Sbjct: 504 LDALEEDKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDAILAVLDKDSDNITTALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K + E S K + L KR+ I+ + + I + + EK LYA Sbjct: 564 VKVITEKLSKDKMQALLQVVKRVSNIMKGNK------DVTIKEKLFKTDIEKTLYAESKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + +++++ K Y + L ++ I+ +F+ V+V +D+ VRDNR+ L YI N+ Sbjct: 618 VESEVEQAIKEKEYADYFEKLFTLVPTIDKYFETVIVMDEDKNVRDNRIGQLTYIMNLFE 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 KIAYLNKL 685 >gi|189485253|ref|YP_001956194.1| glysiyl-tRNA synthetase beta subunit [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287212|dbj|BAG13733.1| glysiyl-tRNA synthetase beta subunit [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 704 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 194/727 (26%), Positives = 337/727 (46%), Gaps = 68/727 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLEI +EEIP+ A + + + G+ + ++ Y TP RL L ++ L S Sbjct: 10 LLEIGAEEIPSSYIEPALKQIEDYALKAFNTSGLKHGVLKTYATPRRLVLIVENLEEKSD 69 Query: 65 EKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 +K EE LGP + A +A GF G+ K +KGD V + Sbjct: 70 DKTEEVLGPSLNAAKDAHGKYTRAAVGFALKNGVIPEKLA--VKTTEKGDYLFFVKKIKG 127 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 E +L I P I+ + +PK M W S F + RP+++I+ + +K+I Sbjct: 128 EKTEKLLVAIFPEIIKNISFPKIMIW-----EESGFKFARPVRNIVALY-----GKKVIK 177 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + ++ N T G + IK+ + Y+ ++ V++D RR + + + A+ Sbjct: 178 FKIADVNSSNWTVGLHTYDNSRIKIDLPEKYLLAMKNKSVIVDQNERRE-EIKRSIKYAA 236 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 ++ D++L++++ LVE+ + +F++KYL LP+E++ + ++ +QK F G Sbjct: 237 ENIGSVIPDEELVDKVNYLVEYPSAVLCAFNRKYLDLPQEILTVCMRKSQKSFAINDENG 296 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 +N FI V N + +G +VVAARL DA F+ D Sbjct: 297 KFSNYFISVKNGVSKYQ-ETAKEGYEKVVAARLADAEFFYSND----------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVALVDRAI 415 L K L + +L +VFH +IGT E++ RI+ + + D D + ++RA+ Sbjct: 339 ---LKKGLGINIEKLK--GIVFHKEIGTVYEKIERIKQIATLFNEEFDMRIDGSALERAV 393 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL +E+V E+PELQG +G+ YA+ EN ++E+H P +P + ++ Sbjct: 394 MLSKVDLTSEMVFEYPELQGVMGRIYALKSGENADVASSVEQHYWPLVTSGKLPLHPMAS 453 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------- 528 +SLADK+DTL F++I +PSGS DPY ++RA G +++ + L+ Sbjct: 454 LLSLADKIDTLTAFFSIGLEPSGSADPYGVKRAGTGFVKVAMNELPKCDLTGVVGRVFEF 513 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN----LLTIVD 572 + LI FF R++ D ++A++ N + ++ Sbjct: 514 LPENVKNNPKSKDACERLIKFFWQRIENIFESEGYNSDEVKAVINAVGINKLKYIGSLRT 573 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ L + KRI I++ +K+N IS ++ L AEK LY Sbjct: 574 KLEALRNADREGDFSFVVAIFKRINNIISQAKKQNIGISGVVNEDLLAENAEKALYTAAK 633 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 I+ + Y ++ + I I+ FF++V+V +D ++ NR+SLL YIKN+ Sbjct: 634 KAKAEIENCVSANEYGRVFGKVSEIKPAIDSFFEKVMVMAEDETIKLNRVSLLSYIKNMF 693 Query: 693 LIVINVQ 699 ++ Sbjct: 694 AGFVDFS 700 >gi|294784336|ref|ZP_06749627.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium sp. 3_1_27] gi|294487908|gb|EFG35263.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium sp. 3_1_27] Length = 686 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 193/728 (26%), Positives = 349/728 (47%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKTNFERKLKNNRIKFSGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + G KA +GFL++ ++ IK D KG+ Sbjct: 62 QEDLDELSIGPSRERAYKNGVLTKAGEGFLKAHRIEEEQIEIIKND--KGEYIAFKRFSK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + +PKSMRWS + RP++ L + +K++ Sbjct: 120 GKPTETILPEILKALVLEETFPKSMRWSD-----KTIRFARPIEWFLALY-----GDKVV 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S++ Y++ + E V++D RR ++ + + Sbjct: 170 DFEIEGIKSSNKSKGHRFFG-KEFEVSSVEDYLKKIRENNVIIDISERRK-MIEEMINNS 227 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F +++ Sbjct: 228 LLEDEKADVDEALLDEVTNLVEHPFAIVGNFSEDFLEVPQEVLIISMKVHQRYFPVLSKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT ++V R + + + + + + + R Sbjct: 330 ----LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ E F +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKGGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II++ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIIKANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I ++L + DN+ +++ Sbjct: 504 LDALEADKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDVILSVLDKDADNITNALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E S K + L + KR+F I+ + + I + + EK LY Sbjct: 564 VRVITEKLSKDKMQALLQTVKRVFNIMKGSK------DVTIKEKLFKNDIEKTLYTESKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +++++ K Y + L ++ I+ +FD V+V +D+ VRDNR+ L I N+ Sbjct: 618 VEEEVEKAIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRIGQLTCIMNLFD 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 RIAYLNKL 685 >gi|332638278|ref|ZP_08417141.1| glycyl-tRNA synthetase subunit beta [Weissella cibaria KACC 11862] Length = 694 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 194/737 (26%), Positives = 325/737 (44%), Gaps = 85/737 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI EE+PA + A L + +E + Y ++ + TP RL + + ++ Sbjct: 1 MANFLLEIGLEEVPAHLVTPAINQLVERAENFMADERLAYGAIKPFSTPRRLAVLISDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + + EE GP G KA GF+R GL T K+ + Sbjct: 61 EKAEDFQEEVKGPAKKVALDAEGNYSKAAQGFVRGQGLTTDD--ITFKEFNGNEYIYVTK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +VL I+ + + +M+W F ++RP++ ++ +L + Sbjct: 119 FEAGKPAAEVLTG-FKQVIEAMTFSTTMKWGRH-----TFEYVRPIRWMVALL-----DD 167 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ D+ + G + GHRF +++ S D Y L V D E R+ I Sbjct: 168 EVVPFDILGVATGRSSRGHRFLGHD-VEIASADQYEEALTSVFVQADAEARKQNIRTQVE 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +AS +V D+DLLEE+ +VE+ F G FD+ YL +P+E++ ++K +Q+ F Sbjct: 227 TIASDNNWTVVVDEDLLEEVNNIVEYPTAFAGGFDEGYLEVPDEVLITSMKEHQRFFHVV 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V N A + ++ GN +V+ ARLEDA F+ DQ Sbjct: 287 DANGALLPHFISVRNGNA-EHIDNVIAGNEKVLVARLEDAKFFYHEDQ------------ 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 +D +L++ V FHAK+G+ R + L IA + D A Sbjct: 334 --------KHDIDFYNYKLEV--VSFHAKLGSVAAHTRRAKALAAIIAGRLAFTDDQQAK 383 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA L E+ + AI EH P +P Sbjct: 384 LARAGEIYKFDLMTGMVGEFDELQGIMGEKYANLFGEDAAVAQAIREHYMPISADGELPA 443 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----LS 526 + + ++LADKLD+L++F+A PSGS DPYALRRA G++ I+ +NK D+ LS Sbjct: 444 SDLGKVLALADKLDSLLSFFAGGMVPSGSNDPYALRRAASGVVNILADNKWDLDIDGILS 503 Query: 527 QFIEDQN----------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 I D N ++ F DR+ L D +R D+I A+ + Sbjct: 504 DLIADINADAVKFGLPEEVMAELQNNVAAVVNFLTDRVVKALQDEGVRRDIINAVTKNNF 563 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 + + + + L + A + + + R+ ++ + AE Sbjct: 564 ADTTQMFESAQVLAAHVNDANFREGVEALTRVMRLTTK-----NATDATVDVALFENAAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K L+ + L ++ + +F++ +V V+D V++NRL+ Sbjct: 619 KALFEA-------VAPVATVDGTDAKLAALLNLQPAVAAYFEETMVMVEDEAVKNNRLAT 671 Query: 685 LQYIKNIILIVINVQKI 701 L + + V N ++ Sbjct: 672 LHAVADEATKVANFLEL 688 >gi|297516327|ref|ZP_06934713.1| glycyl-tRNA synthetase subunit beta [Escherichia coli OP50] Length = 579 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 179/614 (29%), Positives = 289/614 (47%), Gaps = 52/614 (8%) Query: 104 KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSIL 163 KG+ L E +L +V ++ K+P PK MRW + ++RP+ ++ Sbjct: 1 DKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVT 55 Query: 164 CILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPE 222 +L +K+I + I + GHRF + + D Y L V+ D E Sbjct: 56 LLL-----GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYE 110 Query: 223 CRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLT 282 R+ I DA A +G + LLEE+ LVEW V F++K+L +P E + T Sbjct: 111 ERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYT 170 Query: 283 IKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 +K +QK F +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 171 MKGDQKYFPVYANDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR- 228 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 K L+ + RL V+F ++GT ++ RI+ L IA+ Sbjct: 229 -------------------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAE 267 Query: 403 LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 I ADV RA +LSK DL T +V EF + QG +G YA E A+ E +PR Sbjct: 268 QIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPR 327 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 +++P+N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E ++ Sbjct: 328 FAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLN 387 Query: 523 IPLSQFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + L E+ ++I F R + + D D I+A+L Sbjct: 388 LDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRP 447 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 +K ++ F + + KR+ ILA K + +S ++ L E +L Sbjct: 448 ADFDARMKAVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKL 504 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ Sbjct: 505 AMQVVVLRDKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEK 564 Query: 688 IKNIILIVINVQKI 701 ++ + L V ++ + Sbjct: 565 LRELFLRVADISLL 578 >gi|313903269|ref|ZP_07836661.1| glycyl-tRNA synthetase, beta subunit [Thermaerobacter subterraneus DSM 13965] gi|313466357|gb|EFR61879.1| glycyl-tRNA synthetase, beta subunit [Thermaerobacter subterraneus DSM 13965] Length = 740 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 207/762 (27%), Positives = 347/762 (45%), Gaps = 104/762 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ EEIPA +A L+ L E G+ Y+ +R TP RL L ++GLSP Sbjct: 16 DLLVEVGCEEIPAGDCGEARRQLAERAGTALAEAGLTYEVVRSLGTPRRLTLVVQGLSPR 75 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP G A GF RS G++ + + +G+ A Sbjct: 76 QEAREEWVRGPSRAAAFGPGGEPAPAALGFARSQGVEVSQ--LVVRQTPQGEYVFARKVH 133 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +VL ++P + + + ++MRW +IRP+ ++ +L E++ Sbjct: 134 QGRPAAEVLAELLPAVLGGLEFRRTMRWGAGEH-----RFIRPVHWLVALL-----GEEV 183 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSL--DHYIRDLEEAMVLLDPECRRNAILNDAH 233 + + + G ++YGHRF P +++ S D Y R L EA V++DPE RR I+ A Sbjct: 184 LPVSFAGVRAGRVSYGHRFLHPEAVELASAAEDEYRRRLAEAYVVVDPEERRQRIVEQAR 243 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A+AVG E D +LL+E++ LVE+ F GSF + L LP +++ T+K +Q+ F R Sbjct: 244 AVAAAVGGEAEIDPELLDEVVDLVEYPTAFTGSFAPEMLELPRDVLVTTMKVHQRYFPVR 303 Query: 294 TR-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 E L FI V N + QGN RV+ ARL DA F+++D+ Sbjct: 304 QPGESRLMPYFIAVRNGDERH-LQTVRQGNERVIRARLADARFFFQQDRQ---------- 352 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 + L R+A L+ V F +GT ++ R+ L +A+ + + Sbjct: 353 ----------RRLADRVADLER--VSFLPGLGTLLDKTRRLERLVGWLAEELGLPAEERQ 400 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE-NV 468 RA L+KADL T +V EF EL G++G+EYA+L E + A+ E PRG + + Sbjct: 401 QAARAARLAKADLVTALVYEFTELAGRMGREYALLDGEPPAVAQALAEQYLPRGGDDGEL 460 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII------------ 516 P+ + +++AD+ DTL +A +P+GS+DPY LRRA +G++R++ Sbjct: 461 PSTWPGLLLAIADRADTLAGCFAAGLEPTGSQDPYGLRRAGVGLLRLLAGPAAQGPAGRA 520 Query: 517 ---------------------LENKIDIPLS-----------QFIEDQN-----LILFFH 539 L+ +D L+ + D + L+ F Sbjct: 521 EGGGAPAGAGAAGSGHPALPPLDALLDQALAGYLPPVASPAVEVRFDPDEVRARLMDFLA 580 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 RL+ L + HD+I+A+L + ++ + + + E +S L +R + Sbjct: 581 ARLRGLLAEAGYAHDVIQAVLAVDARDVPGVWARARAVAELVASPLAADVLTVHRRAANL 640 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 E + + P E+ LYA + +QE++ + Y + + Sbjct: 641 AGRAE------ADAVDPALFREAEEQALYAAVEAAAGVVQEALAVRDYGAYFRAIAGLRP 694 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ F D+VLV +D +R NRL+LL+ + + V + ++ Sbjct: 695 AVDAFLDRVLVMAEDPALRANRLALLKRVAGLAGRVAALGEL 736 >gi|239618467|ref|YP_002941789.1| glycyl-tRNA synthetase, beta subunit [Kosmotoga olearia TBF 19.5.1] gi|239507298|gb|ACR80785.1| glycyl-tRNA synthetase, beta subunit [Kosmotoga olearia TBF 19.5.1] Length = 683 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 180/720 (25%), Positives = 327/720 (45%), Gaps = 70/720 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLEI EEIPA ++ L LL+++ + Y N++ + R + +KGL Sbjct: 7 LLEIGIEEIPASEVKSIVSQINGRLPNLLEQQRINYSNIKTFIASRRFGVLIKGLPEKQE 66 Query: 65 EKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 + +E+ GP + G KA++GFLRS ++ K + + Sbjct: 67 DYYQEKRGPAEKVAFKDGKPTKALEGFLRSNNATVDDVE--VREFKGTSYIFLKKKVEGK 124 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 VL + I + + K MRW ++RP++ ++ + +++++L Sbjct: 125 KTSLVLSEVFKELIHGLQFKKPMRWGNGEH-----KFVRPVRWLVALF-----DDEVLNL 174 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 +L + + +YGHRF + ++Y L+EA+V+ D + R ++N+ R+ Sbjct: 175 ELFDKKASDTSYGHRFFFDKIKV--TSENYFETLKEALVIADFDERAQMVINELERIEKE 232 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 + + D +L++E+ + E +G F KYL LP+E+I +TI+ +Q+ F Sbjct: 233 KNVTIPRDAELIDEVTCITELPTAVLGKFLPKYLYLPDEVIIVTIRHHQRTFPVYEGN-K 291 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F+ + A D + +G V+ ARLEDA +++RD Sbjct: 292 LTNSFVAFQDGPA-DPKGNVRRGYEEVINARLEDAHFYFERD------------------ 332 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDRAI 415 + KPL+ + L ++F +GT E+ R+R L K IA+ ++A + +DR Sbjct: 333 --IQKPLEAYVEYLK--GILFQRGLGTLYEKTQRVRSLSKYIAKQLNAKPVEEEAIDRTA 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL T +V+EFPELQG +G+ YA+ E+ I+EH +P VP Sbjct: 389 LLAKADLTTRVVQEFPELQGIMGRIYALESGESSEVAWGIQEHYEPL---NEVPETLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V +AD++DTL+ + + PSGSKDPY LRR I + ++ L + E Sbjct: 446 VVGVADRIDTLVGNFLLGNIPSGSKDPYGLRRKLSQIFETMYAFGWNMNLIKLFEKAADN 505 Query: 532 ---------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 L F R + +L ++ ++ A+ N + K ++E Sbjct: 506 LGEGYEKISTTLEPFIKSRYEAFLLEKGYSINIARAV-SMWWKNPYLGELVAKAISEIIG 564 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 +K L++ +R+ I + S + L EAE L+ + I++++ Sbjct: 565 RDDFDKLLVAYQRVHNISKKHD------SNKFDGSLFLKEAEVNLFNAYVEALDKIKKAL 618 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + + + L ++ EPI+ +FD+V V ++R NRL L+ + + + ++ ++ Sbjct: 619 EKRDFSVALKTLIALKEPIDEYFDEVFVMDSQVDIRLNRLGFLKALDELFFEIADLSYLI 678 >gi|77408169|ref|ZP_00784914.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae COH1] gi|77173184|gb|EAO76308.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae COH1] Length = 679 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 202/713 (28%), Positives = 341/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + DVL Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLSVDD---IEFREVKGEEYVYVTKHETGKSAIDVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + V + ++ +P +M W+ ++F +IRP+ +++ +L ++ ++LD +I Sbjct: 132 S-VTEVLTELTFPVNMHWAN-----NSFEYIRPVHTLVVLL-----DDQALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G I+ GHRF ++ S Y DL + V+ D + R+ I+N H + + + Sbjct: 181 GRISRGHRFLGSDT-EISSASSYEDDLRQQFVIADAKERQQMIVNQIHAIEEKKNISVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI Sbjct: 240 DEDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQKL--------------------NI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +L V FH KIG+ E + R++V+ + +A + V RA + K DL Sbjct: 339 ADLVEKLKQ--VTFHEKIGSLYEHMDRVKVISQHLADKAGLSDEEKLAVLRAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +I ++LADK Sbjct: 397 LTGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRIGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------- 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + + Sbjct: 457 FDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDY 516 Query: 530 -EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 + ++ F R++ + + + D+ EA+L + + I++ + L + A+ + Sbjct: 517 ANQKEVMAFISARIEKMIGSK-VPKDIREAVLESDTYIVSLILEASQALVQKSKDAQYKV 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + S+ + EK LY I + H Sbjct: 576 SVESLSRAFNLAEK-----VTHSVSVDSSLFENNQEKALYQAILSLEL-------TEDMH 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D L ++ I FFD +V DD +++ NRL+LL + V + Sbjct: 624 DNLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALLNSLVAKARTVAAFNLL 676 >gi|322391031|ref|ZP_08064535.1| glycyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 903] gi|321142261|gb|EFX37735.1| glycyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 903] Length = 704 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 202/713 (28%), Positives = 339/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 41 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 100 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 101 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKPAKEVLA 157 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ + F +IRP+ +++ +L ++ +DLD +I Sbjct: 158 G-VPEVLASLTFPVSMHWAN-----NTFEYIRPVHTLIVLL-----GDEALDLDFLDIHS 206 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 207 GRVSRGHRFLGHE-VEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEADQGVQVQI 265 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 266 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGQLKPNFIS 325 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ + Sbjct: 326 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KI 364 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 365 EDLVAKL--AHVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEEKAAVARAAEIYKFDL 422 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 423 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILALADK 482 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 483 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYALSFDSLSY 542 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ +A+L N + +++ + L+E + + Sbjct: 543 DNQVEVLNFIKARVDKMMG--RTPKDIKDAVLAGSNFVVADMLEAAEALSEAAKTDGYKA 600 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + + EK L I D S Sbjct: 601 AVESLSRAFNLAEKA-----DASVAVDASLFENDQEKALAKAIEDLELTGSASDK----- 650 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V +D V++NRL+LL + V ++ Sbjct: 651 --LAQLFALSPVIDAFFDNTMVMAEDEAVKNNRLALLAGLVAKANAVAAFNQL 701 >gi|256846627|ref|ZP_05552083.1| glycyl-tRNA synthetase beta subunit [Fusobacterium sp. 3_1_36A2] gi|256717847|gb|EEU31404.1| glycyl-tRNA synthetase beta subunit [Fusobacterium sp. 3_1_36A2] Length = 686 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 194/728 (26%), Positives = 350/728 (48%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKTNFERKLKNNRIKFSGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + G KA +GFL++ ++ IK D KG+ Sbjct: 62 QEDLDELSIGPSRERAYKNGVLTKAGEGFLKAHRIEEEQIEIIKND--KGEYIAFKRFSK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + +PKSMRWS + RP++ L + +K++ Sbjct: 120 GKPTETILPEILKALVLEETFPKSMRWSD-----KTIRFARPIEWFLALY-----GDKVV 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S++ Y++ + E V++D RR ++ + + Sbjct: 170 DFEIEGIKSSNKSKGHRFFG-KEFEVSSVEDYLKKIRENNVIIDISERRK-MIEEMINNS 227 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F +++ Sbjct: 228 LLEDEKADVDEALLDEVTNLVEHPFAIVGNFSEDFLEVPQEVLIISMKVHQRYFPVLSKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT ++V R + + + + + + + R Sbjct: 330 ----LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ E F +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKGGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II++ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIIKANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I ++L + DN+ +++ Sbjct: 504 LDALEADKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDVILSVLDKDADNITNALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E S K + L + KR+F I+ + + I + + EK LY Sbjct: 564 VRVITEKLSKDKMQALLQTVKRVFNIMKGSK------DVTIKEKLFKNDIEKTLYTESKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +++++ K Y + L ++ I+ +FD V+V +D+ VRDNR+ L YI N+ Sbjct: 618 VEEEVEKAIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRIGQLTYIMNLFD 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 RIAYLNKL 685 >gi|19703422|ref|NP_602984.1| glycyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|25009299|sp|Q8RH44|SYGB_FUSNN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|19713496|gb|AAL94283.1| Glycyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 686 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 198/728 (27%), Positives = 349/728 (47%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKSNFEKKLKNNRIKFDGVRTYGTPRRLVLVADEVAGM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ IK D KG+ Sbjct: 62 QEDLDELSIGPSRERAYKDGALTKAGEGFLKAHRIEEEQIEIIKND--KGEYIAFKRFLK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + + KSMRWS + RP++ L + K+I Sbjct: 120 GKPTEAILPEILKALVLEETFQKSMRWS-----TKTIRFARPIEWFLALYGG-----KVI 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S+++Y++ + E V++D RR ++ + + Sbjct: 170 DFEIEGIKSSNKSKGHRFFG-KEFEVSSVENYLKKIRENNVIIDISERRK-MIEEMINNS 227 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + DK LL+E+ LVE +G+F +++L +P+E++ +++K +Q+ F ++ Sbjct: 228 LLEDEKADVDKALLDEVTNLVEHPFAIVGTFSEEFLEVPQEVLIISMKVHQRYFPILNKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT +V R + + + + + + R Sbjct: 330 ----LKIPLDNNVEKLKT--VVFQKDLGTIYNKVKRCEKIAEFLVGKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIVR--EFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ EF +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I A+L ++DN+ T +++ Sbjct: 504 LDALEEDKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDVILAVLDKDSDNITTALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K + E S K + L KR+ I+ + + I + + EK LYA Sbjct: 564 VKVITEKLSKDKMQALLQVVKRVSNIMKGNK------DVTIKEKLFKTDIEKTLYAESKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + +++++ K Y + L ++ I+ +F+ V+V +D+ VRDNR+ L YI N+ Sbjct: 618 VESEVEQAIKEKEYADYFEKLFTLVPTIDKYFETVIVMDEDKNVRDNRIGQLTYIMNLFE 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 KIAYLNKL 685 >gi|289168228|ref|YP_003446497.1| glycyl-tRNA synthetase beta subunit [Streptococcus mitis B6] gi|288907795|emb|CBJ22635.1| glycyl-tRNA synthetase beta subunit [Streptococcus mitis B6] Length = 678 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 333/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEEEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGKETK-IQSALSYEEDLRSQFVIADPREREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALTFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKTEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVAEMLEAASALVEASKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L V ++ + + Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSSLFENDQEKALAEV-------VESLVLSGTAN 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V +D VR NRL++L ++ + +I Sbjct: 623 QQLNHLFALSPVIDAFFENTMVMAEDEAVRQNRLAILSHLTQKAAKLARFNQI 675 >gi|326404580|ref|YP_004284662.1| glycyl-tRNA synthetase beta subunit [Acidiphilium multivorum AIU301] gi|325051442|dbj|BAJ81780.1| glycyl-tRNA synthetase beta subunit [Acidiphilium multivorum AIU301] Length = 666 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 232/676 (34%), Positives = 344/676 (50%), Gaps = 45/676 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F LE++SEEIPARMQ AAE L+ ++ L + ++++ + R+ + + Sbjct: 1 MAEFFLELFSEEIPARMQEAAAEQLAKLVGAQL--APLSPRDIKAFGAARRIAVVAT-ID 57 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 PE E GP++ A +A++GFLR G + +++D +L P R Sbjct: 58 AEVPESASEVRGPKLSAPPQALEGFLRKNGAA--REELVEEDG----YFLLRRNLPSRPA 111 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ A+ WPKSMRW AF+W+RPL+ ++C+L +I L Sbjct: 112 GELIAGEFAQALAGFGWPKSMRWG----QSGAFTWVRPLRRVVCLLDG-----AVIPFTL 162 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G+ + GHRF AP +V S + +L V++D + RR I A A G Sbjct: 163 GPVASGDQSEGHRFLAPGAFRVTSAAQWQEELRARRVIVDADERRKTIAEGLRAAAGAKG 222 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L + D LL+E+ GLVEW +G+ D + LP E+ L++K NQ+ F TR G A Sbjct: 223 LSVAGDAGLLDEVAGLVEWPVCLIGAIDPGQMALPPEVRELSMKVNQRYFATRDAAGNPA 282 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F V+NI A+DGGAAI+ GN RV+ ARL DA HFW +D+ Sbjct: 283 PYFAFVANIAANDGGAAIIAGNERVLRARLADAEHFWAQDR------------------- 323 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV---L 417 + LD + +LD V FHAK+GTQ R RI L ++IA + AD A D A L Sbjct: 324 -KQTLDSWLPKLD--AVTFHAKLGTQHARAGRIEALAREIALALGADAAAADAAARAGRL 380 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 KADL + +V EFPELQG +G YA E + AI H +P+GP + VP+ +S V Sbjct: 381 CKADLVSGMVGEFPELQGIMGGYYAEASGEGDAIAGAIRTHYQPKGPSDEVPSGVVSAAV 440 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF 537 +LADK+DTL F+ I E P+GS DP+ALRRA LG+IRI+LEN + + L + + F Sbjct: 441 ALADKIDTLREFFRIGETPTGSGDPFALRRAALGVIRIVLENGLRLNLMPLV-GAEVFDF 499 Query: 538 FHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 +RL++ L R D++ A+L +D+L ++ + L F +S G L + +R Sbjct: 500 LIERLRVKLRGEGKRFDVLNAVLDTARDDDLTRLIARTEALGAFLASEDGANLLAAYRRS 559 Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 IL IE+ K+ I P L AE L + + + + + Sbjct: 560 TNILRIEDAKDGPHEGTIDPGLLAEAAEIALADALEAVDREAVRRLADEDFAGAMRGFAA 619 Query: 657 ICEPIEIFFDQVLVNV 672 + P++ FFD V VN Sbjct: 620 LRAPVDAFFDHVTVNA 635 >gi|307706944|ref|ZP_07643743.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis SK321] gi|307617658|gb|EFN96826.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis SK321] Length = 678 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 193/713 (27%), Positives = 330/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAVQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ + ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYITKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEEEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPREREQMIVDQIKAIETEHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ E++L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKESVLAGSNFVVADMLEAASALVEASKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + E EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENEEEKALAEAVESLVLSGTAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V ++ VR NRL++L ++ + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAENEAVRQNRLAILSHLTQKAAKLARFNQI 675 >gi|67459738|ref|YP_247362.1| glycyl-tRNA synthetase subunit beta [Rickettsia felis URRWXCal2] gi|75535872|sp|Q4UJU2|SYGB_RICFE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|67005271|gb|AAY62197.1| Glycyl-tRNA synthetase beta chain [Rickettsia felis URRWXCal2] Length = 664 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 222/702 (31%), Positives = 345/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ LY L + K E G Sbjct: 13 IPAFMQKNAEEGYLNIFTKIFEENEI-FAKVQAFAGPRRITLYATHLPKVTLPKETEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 72 PSIDAPEAAINGFCKAHNVSKLELST--KLINNQLYYFFVKKTEEREIKEILPEIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E ++ L + NI YGH Sbjct: 130 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----VLPLQFGHLTANNIAYGH 179 Query: 193 RF--HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 R+ ++V + Y L E V+L+ R I LA++ L + ED L+ Sbjct: 180 RYRLTDNKKLEVTDFEDYKNKLSENHVILERTKREEIIKTGLLELANSRNLNIKEDNRLI 239 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQ 310 EE+ GL E+ V +G +K+L LP+E++ +++T+QK F +EG A F+ VSN + Sbjct: 240 EEVAGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKEGNFAQYFLFVSNGR 299 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 ++ +++GN +V++ARL DAL+F+K+D ++K L+ R+ Sbjct: 300 FANA-ELVIKGNEKVLSARLSDALYFYKQD--------------------IAKTLESRLG 338 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 +L+ V FHAK+G E+V R+ + A D + A L K+DL +E+V EF Sbjct: 339 KLE--AVTFHAKLGNLREKVERVAKICSYTA----LDNTDLITAAKLCKSDLVSEMVGEF 392 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 P+LQG +G YA + AI++H KP+G +NVP + ++LADK+D+L+ Sbjct: 393 PDLQGIMGYYYAKHEGLGEEVAAAIKDHYKPQGLSDNVPGGN-AALLALADKVDSLVGLM 451 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-----------EDQNLILFFH 539 E P+GS DPYALRR LGIIRIILENK+++ L+ I + + FF Sbjct: 452 IAGEAPTGSGDPYALRRQALGIIRIILENKLELNLNDLIIFSLKLYGNSADKDLITSFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y D LI A L NL+ + L EF G++ L + KR I Sbjct: 512 ERAKFYFK-NDYDIALINAALDL---NLVDTKFKLDSLKEFLVEDAGKQLLNAYKRASNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + ++I+ + + EK L+ V+ + S+ K Y++ +LL + Sbjct: 568 I-----DGQKITGLVDASLFSTQPEKELFEVMQKISPQVTSSISDKDYNKALNLLSFLLT 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ +NRLSLL I + V ++ Sbjct: 623 PITSFFDNVLVNDPDPKIAENRLSLLHNICELFDKVAKFCRL 664 >gi|157804240|ref|YP_001492789.1| glycyl-tRNA synthetase subunit beta [Rickettsia canadensis str. McKiel] gi|229558574|sp|A8F071|SYGB_RICCK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157785503|gb|ABV74004.1| glycyl-tRNA synthetase subunit beta [Rickettsia canadensis str. McKiel] Length = 667 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 213/702 (30%), Positives = 349/702 (49%), Gaps = 60/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A + + + +E + + ++ + P R+ L+ L + K G Sbjct: 13 IPAFMQKNAEKGYLNVFTKIFEENKI-FAKVKVFVGPRRITLHATHLPKVTLPKDTAIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + K Y + + +R I+++L I+ AI Sbjct: 72 PSLNASEAAINGFCKAHNVS--KLELFTKLINNQLYYFFIKKTEEREIKEILPEIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W + W+RPL++ILCI E I+ + + NITYGH Sbjct: 130 NKYSWTKSMFWGDYN-----IKWVRPLRNILCIFDGE-----ILPMQFGHLTANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R I+V++ + Y L E V+L+ R I LA++ L + ED L+EE Sbjct: 180 RLTDNKKIEVENFEDYKNKLSENHVILERTKREEIIKAGLLELANSHDLTIKEDNRLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G K+L LP+E++ +++ +QK F + G A F+ VSN + Sbjct: 240 VSGLTEFPVVLLGRIPLKFLELPKEVLISSMRRHQKYFCLFDKAGNFAPYFLFVSNGRFV 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + +++GN +V+AARL DAL+F+K+D ++K L+ +++L Sbjct: 300 NA-ELVIKGNEKVLAARLADALYFYKQD--------------------IAKTLESNLSKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 L V FH K+G E+V RI + IA + + A L K+DL +E+V EFP+ Sbjct: 339 --LAVTFHVKLGNLREKVDRITNICNYIAP----NNKDLIMAAKLCKSDLVSEMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + AI++H KP+G +NVP + ++ ADK+D+L+ Sbjct: 393 LQGIMGYYYAKHDGLDEEVATAIKDHYKPQGLSDNVPNGN-AALLATADKIDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-------------LILFFH 539 E P+GS DPYALRR LGIIRII+ENK+++ L+ I +I F Sbjct: 452 GEAPTGSGDPYALRRQALGIIRIIIENKLELNLNDLINFSINLYKDSSDKNKDLIISFLK 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R+K Y + LI A+L ++L+++ + L +F + G++ L + KR I Sbjct: 512 ERIKFYFK-NNYDISLINAVLDLSAEDLVSVSLKLNTLQKFLAEDAGKQLLNAYKRASNI 570 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + ++EK L+AV+ I +S+ K Y ++ +LL S+ Sbjct: 571 I-----GDQKITGLVDGNLFTTQSEKELFAVMQKILPQIIDSITDKDYERVLNLLSSLLA 625 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FF VLVN D ++ NRLSLLQ + + ++ Sbjct: 626 PITSFFGNVLVNDPDPKIVQNRLSLLQNTCELFHKIAKFNRL 667 >gi|182679089|ref|YP_001833235.1| glycyl-tRNA synthetase, beta subunit [Beijerinckia indica subsp. indica ATCC 9039] gi|182634972|gb|ACB95746.1| glycyl-tRNA synthetase, beta subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 821 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 254/527 (48%), Positives = 346/527 (65%), Gaps = 23/527 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL ++ G L E+G+ ++ + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQAQAAEDLKRLVTGALSEQGLSFEGAASFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE+ GP+VGA + A+ GFL+S GL ++ ++KD KKGD Y+AV+ + R Sbjct: 61 IRQADVREEKKGPKVGAPEAALQGFLKSAGLASLDQAIVQKDAKKGDFYVAVIERAGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + A W+RPL +IL E + ++ + Sbjct: 121 LDVLADILPAVIKSFPWPKSMRWGRASARSDALRWVRPLHAILATFGPETEEPDVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G T+GHRF AP PIK++ D Y+ LE+A V+LD E RR+ IL+DA L+ A G Sbjct: 181 EGIEAGQTTFGHRFLAPEPIKIRRFDDYLPALEKAKVVLDAERRRDIILHDARDLSFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 L+L+EDK LLEE+ GLVEW V + FD ++L +P E+IR TI+ NQKCFV R G L Sbjct: 241 LDLIEDKALLEEVAGLVEWPVVLLAEFDPQFLEIPPEVIRATIRANQKCFVLRDPVSGRL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A+ F+LV+NI+ASDGG AIV GN+RVV ARL DA FW+ D Sbjct: 301 AHKFLLVANIEASDGGKAIVAGNARVVRARLSDAKFFWETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ +L+ +VFH K+GTQGERV R+ + + ++ ++ AD A RA L+K Sbjct: 342 -LQTRLEARLPKLET--IVFHEKLGTQGERVQRLVLNARDLSPIVGADQAEAARAAELAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL +E+V EFPELQG +G+ YA Q E+ + AIEEH KP+GP + VP +SI V+L Sbjct: 399 TDLVSEMVGEFPELQGLMGRYYAQKQGESSNVAAAIEEHYKPQGPNDLVPNAPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ADKLD+L+ F+AI+E+PSGSKDPYALRRA LG+I +ILENK+ +PL Sbjct: 459 ADKLDSLVGFFAIDERPSGSKDPYALRRAALGVIALILENKLRLPLR 505 Score = 174 bits (440), Expect = 6e-41, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 87/185 (47%), Gaps = 16/185 (8%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 LI FF DRLK+YL +R R+DLI+A+ P D+LL IV ++ L F + +G+ L Sbjct: 635 QLIAFFGDRLKVYLRERGARYDLIDAVFALPGQDDLLLIVARVEALASFLDTEEGKNLLA 694 Query: 592 SAKRIFQILAIEEKKNR--EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR--- 646 +R IL EEKK+ + P L E+ L+ I + + Sbjct: 695 GYRRAANILKAEEKKDGVGAFNAPADPGLLREGQERALWERIRLMREEAETHLYKAEEEI 754 Query: 647 ----------YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + L S+ P++ FFD V VN + E+R NRL LL ++ + + Sbjct: 755 GRKTFEGPTPFEKAMENLASLRAPVDAFFDHVTVNASEPELRVNRLQLLNELRQAVHRIA 814 Query: 697 NVQKI 701 + KI Sbjct: 815 DFSKI 819 >gi|225860757|ref|YP_002742266.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae Taiwan19F-14] gi|298254994|ref|ZP_06978580.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502571|ref|YP_003724511.1| glycyl-tRNA synthetase, subunit beta [Streptococcus pneumoniae TCH8431/19A] gi|254781868|sp|C1CQP4|SYGB_STRZT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225728048|gb|ACO23899.1| glycyl-tRNA synthetase beta chain (Glycine--tRNA ligasebeta chain) (GlyRS) [Streptococcus pneumoniae Taiwan19F-14] gi|298238166|gb|ADI69297.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae TCH8431/19A] gi|327389660|gb|EGE88005.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA04375] Length = 678 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVHIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|148239654|ref|YP_001225041.1| glycyl-tRNA synthetase beta subunit [Synechococcus sp. WH 7803] gi|147848193|emb|CAK23744.1| Glycyl-tRNA synthetase beta subunit [Synechococcus sp. WH 7803] Length = 719 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 181/753 (24%), Positives = 304/753 (40%), Gaps = 88/753 (11%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + FLLEI +EE+PA A L + LK+ + + + TP RL + ++ L Sbjct: 1 MANTFLLEIGTEELPADFVPSALRQLEQRIRSDLKDLRLAHGELSVTGTPRRLLVVVREL 60 Query: 60 SPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+ E+R GP V G A GF + G+ KD KG A + Sbjct: 61 IDSQPDLEEDRKGPPVSQALVDGRPGPAAIGFAKRCGVDPEDLQP--KDTPKGPCLFARV 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + P + +L VP I + + MRW + RP++ ++ +L + Sbjct: 119 KTPGQPSSALLGECVPRWIDALQGRRFMRWGCGEQ-----RFSRPVRWLVVML-GDAVIP 172 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +D + G + GHR H +V S + +R L +A V+++ E R I Sbjct: 173 VTLDTADPVVTSGRTSRGHRLH-EQLQEVNSAEDLLRQLNDAGVMVNREQRAETIRAAIV 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + + + L +E++ LVE V G ++L LP E+I ++ +Q+ R Sbjct: 232 SESERCDGQADCPESLFQELVDLVESPSVLKGRIADRFLELPPEVIVTVMQAHQRYVPLR 291 Query: 294 TRE-----------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 + VL F+LVSN S IV GN RV+ ARL DA F D+ Sbjct: 292 IPQAVSDPLQLQARNVLKPEFLLVSNGVES-ASDTIVSGNQRVLGARLADAEFFLNVDRR 350 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 + +QR L+ V F +G+ +R RI + ++ Sbjct: 351 --------------------QSSEQRRQSLER--VTFAEGLGSLLDRSERISWVMDQLLL 388 Query: 403 LIDAD---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 + + + RA L K DL ++V EFPELQG +G +Y + + E A+ EH Sbjct: 389 ALQLEGTVASHARRAAHLCKHDLVCQMVGEFPELQGLMGGKYLLEEGEPRGVALAVAEHY 448 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P G + +P + ++LA++++ L++ +A ++P+GS DPYALRRA GI++I+ Sbjct: 449 LPAGSGDALPASDAGALLALAERIELLLSIFAKGQRPTGSSDPYALRRAGNGIVQILWNR 508 Query: 520 KIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAI 559 +PL +L R+ D DL++A+ Sbjct: 509 GWQLPLQSLFTTASTHWAERFPAFNVEAEALANDLGQLLCQRMVSQFEDDGFAIDLVQAV 568 Query: 560 LRPEND------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE 613 + + D + L S + + +R ++ + ++S+E Sbjct: 569 CGEGVSTERLLEDPVDARDRLLLLKTLRESGRLQDLQAVVQRASRLAEKGDLPPSKLSVE 628 Query: 614 --ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQV 668 + +E L + K Y ++ L +E FF D V Sbjct: 629 GIVDAFLFDSPSEAALLVELEALSP----LAQAKDYERLAQRLQGAARALEAFFDGSDSV 684 Query: 669 LVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +V +D VR NRL+LL ++N ++ I Sbjct: 685 MVMAEDPSVRRNRLNLLGVLRNQASVLARFDHI 717 >gi|217969300|ref|YP_002354534.1| glycyl-tRNA synthetase subunit beta [Thauera sp. MZ1T] gi|217506627|gb|ACK53638.1| glycyl-tRNA synthetase, beta subunit [Thauera sp. MZ1T] Length = 695 Score = 502 bits (1292), Expect = e-139, Method: Composition-based stats. Identities = 199/715 (27%), Positives = 335/715 (46%), Gaps = 64/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + E + + LK +G+ R + +P RL + + ++ + K Sbjct: 16 PPKALPRLGETFATRIAEGLKAKGLAPVDAAFRSFASPRRLAVTVAQVAAEAAAKEVTEK 75 Query: 72 -GP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 P G A+ + + G+ + + ++ K + P + DV Sbjct: 76 LMPVSVALDAEGKPTPALLKKMEAKGIAAEAVARFERRLDGKAEALFHTAMVPGAKLADV 135 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L +V AI+ +P PK MRW + ++RP+ + + AE ++ + ++ Sbjct: 136 LSGVVQDAIKALPIPKVMRWGDGDAT-----FVRPVHKLTLLHGAE-----VVPGRVLDL 185 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G + GHRF + + + + D Y L E V+ + RR I A+ G Sbjct: 186 DSGRTSRGHRFMSRGDLSIATADAYEPTLLAEGKVIPNFAERRADIERQLLAEAAKQGAL 245 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 L E DLL+E+ LVE V++G F+ ++L +P+E + LT++ NQK F G L N Sbjct: 246 LNEYADLLDEVAALVEHPTVYVGEFEAEFLAVPQECLILTMRANQKYFPLFDGAGKLLNR 305 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSN+Q +D IV GN+RVV RL DA F+++D+ Sbjct: 306 FLIVSNMQVAD-PINIVAGNARVVRPRLSDARFFFEQDK--------------------K 344 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 + L+ R+ RL VV+H K+G+Q ERV R+ L IA + DVA RA L+KADL Sbjct: 345 QKLEARLPRL--APVVYHNKLGSQLERVERLEALAGAIAAQLHGDVAAAKRAARLAKADL 402 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G+ YA+ E DAI+ H +PR + +P ++ V+LADK Sbjct: 403 VTDMVGEFPELQGIMGRYYALADGEGEVVADAIQAHYQPRFAGDALPAGNVAAAVALADK 462 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LD L+ F+ I P+G KDP+ALRRA LG++RI++E + + L + I+ Sbjct: 463 LDALVGFFGIGMVPTGDKDPFALRRAALGVLRILMEAPLPLELPRLIDTAAAGFKPGLLT 522 Query: 532 -----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 L F ++RLK L + +I+A+L + + + + F + + Sbjct: 523 AEGFAAQLQDFMYERLKNLLRETGRDGAVIDAVLALRPARIDLVPAKLAAVEAFRALPEA 582 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 E + KRI IL E E L AEK L+ + + ++ + ++ Sbjct: 583 EALAAANKRIVNILKKAE----GAPGEPDLALLQEAAEKALFRQVVEVAPLVRSHVANED 638 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y L + ++ FF+ V+V ++ R NR++LL + ++ V ++ ++ Sbjct: 639 YTDALRALAGLRAAVDQFFEDVMVMAEEPLTRANRIALLAQLAGLMNQVADISRL 693 >gi|309388941|gb|ADO76821.1| glycyl-tRNA synthetase, beta subunit [Halanaerobium praevalens DSM 2228] Length = 687 Score = 502 bits (1292), Expect = e-139, Method: Composition-based stats. Identities = 208/730 (28%), Positives = 337/730 (46%), Gaps = 75/730 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + + E+ +EE+PA + ED + + + Y+ + Y TP RL L ++ L Sbjct: 1 MAKNLIFEVGTEEMPAASMQRFREDYLQTAATIFENNNLEYEEINVYSTPRRLVLAIEAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP V G +A +GF + GL+ KK A Sbjct: 61 AEKQTDNKEIVRGPAVNIAFDADGNPTRAGEGFAKGQGLEVSDL------TKKDGYLYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++L I+ I+ VP PK+MRW + +IRP+K +L + +E Sbjct: 115 KITKGQNTANILAGILTQLIKNVPLPKAMRWGSVK-----MEFIRPIKWLLALFGSE--- 166 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I+L+L I N + GHRF + ++++ D Y LE A V++ + R I Sbjct: 167 --KIELELAGIKSSNYSIGHRFLSEGHLEIKEADAYFSTLENASVIVKQKQREEKIRKQI 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +L + + LL E+I L+E+ F GSFD YL LP E++ ++ +Q+ F Sbjct: 225 EKL--DLSASALIKDSLLTEVIDLIEFPTAFKGSFDSSYLKLPAEVLITAMEKHQRYFPV 282 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +++G L + FI V + + + GN V+ RL+DA F+ DQ + Sbjct: 283 VSQKGELKSEFIGVRDGGSDFIKEV-ISGNEMVLKGRLDDAQFFFAEDQKYGFLNRTEN- 340 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 + D+VF IG+ E+V ++ + +A + Sbjct: 341 ---------------------IKDIVFQKDIGSVYEKVQKLEKITANLADTLAYTAETKK 379 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + +A L+K DL TE+V EF LQG +GKEYA+L E AI EH PR + +P Sbjct: 380 MAKKAAKLAKNDLATEMVNEFSNLQGLMGKEYALLAGEAAETATAIFEHYLPRFAGDKLP 439 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 K +++A+KL L + + +N PSGS+DP+ALRR G++RIILENK++I + Q I Sbjct: 440 ETKSGTILAMAEKLFNLSSHFLLNNIPSGSQDPFALRRQATGLVRIILENKLEINIEQLI 499 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L F RL+ L + +IR+D+I A+++ N NL + Sbjct: 500 HSSMKIVAINLEQIDSTAAKLKEFILQRLENLLAEENIRYDIINAVIKVNNHNLFDLYQR 559 Query: 574 IKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L EF + + R+ I E K LE L+ EK+LY + Sbjct: 560 AHKLMEFRNEDSKLFVDLVRGLVRVKNISEKAENK-----LEFDAGLLVENEEKKLYKDL 614 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 T I+E +Y + LL + I+ F D V+V VDD+++++NRL+LL I + Sbjct: 615 KTRKTKIKELFSSAKYKKGLYLLVELKPAIDQFLDNVMVMVDDQKIKNNRLALLGSITPL 674 Query: 692 ILIVINVQKI 701 + VI++++I Sbjct: 675 VAKVIDIEEI 684 >gi|168486171|ref|ZP_02710679.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1087-00] gi|183570718|gb|EDT91246.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1087-00] Length = 678 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 330/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMVAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y +L + V+ DP R I++ ++ + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEENLRKQFVIADPCEREQMIVDQIKKIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|15903371|ref|NP_358921.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae R6] gi|116516232|ref|YP_816770.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae D39] gi|148984818|ref|ZP_01818071.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP3-BS71] gi|73919753|sp|Q8DP66|SYGB_STRR6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|122278344|sp|Q04JM8|SYGB_STRP2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|15458973|gb|AAL00132.1| Glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae R6] gi|116076808|gb|ABJ54528.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae D39] gi|147922840|gb|EDK73956.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP3-BS71] gi|301800324|emb|CBW32950.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae OXC141] Length = 678 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 196/713 (27%), Positives = 330/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL + V+ DP R I++ ++ + G+ + Sbjct: 181 GRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKKIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|168492544|ref|ZP_02716687.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC0288-04] gi|183573302|gb|EDT93830.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC0288-04] Length = 678 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 194/713 (27%), Positives = 327/713 (45%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF + S Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IHSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLILSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|149007254|ref|ZP_01830912.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP18-BS74] gi|307126956|ref|YP_003878987.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae 670-6B] gi|147761058|gb|EDK68026.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP18-BS74] gi|306484018|gb|ADM90887.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae 670-6B] gi|332074227|gb|EGI84704.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA17545] Length = 678 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|148992641|ref|ZP_01822309.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP9-BS68] gi|168489636|ref|ZP_02713835.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP195] gi|147928658|gb|EDK79672.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP9-BS68] gi|183571932|gb|EDT92460.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP195] gi|332072269|gb|EGI82752.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA17570] Length = 678 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 329/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSELFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|169832877|ref|YP_001694890.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae Hungary19A-6] gi|238688367|sp|B1ICQ5|SYGB_STRPI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|168995379|gb|ACA35991.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae Hungary19A-6] Length = 678 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLILSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|55736573|gb|AAV60215.1| glycyl-tRNA synthetase beta subunit [Streptococcus thermophilus LMG 18311] Length = 714 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 199/713 (27%), Positives = 336/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 51 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 110 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 111 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKSAKEVLA 167 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P SM W+ ++F +IRP+ +++ +L ++ ++LD I Sbjct: 168 G-IPEVLASLTFPVSMHWAN-----NSFEYIRPVHTLIVLL-----GDEALELDFLGIKS 216 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +++ + D Y DL V+ + + R N I + + G+++ Sbjct: 217 GRVSRGHRFLGHE-VEITNADSYEEDLRTVYVIANSKERENMIREQIKAIEAEQGVQVQI 275 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI Sbjct: 276 EEGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFIS 335 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ + Sbjct: 336 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KI 374 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 375 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDL 432 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 433 LTGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADK 492 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 493 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 552 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +I F R+ + D+ EA+L N + +++ + L+E + + Sbjct: 553 DNQAEVIRFIKARVDKMMGS--TPKDIKEAVLSGSNFVVADMLEAAEALSEAAKTDGYKA 610 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + + EK L S Sbjct: 611 AVESLSRAFNLAEKA-----DTSVAVDASLFENDQEKALAQAAESLELTGSASDK----- 660 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + I+ FFD +V DD V++NRL+LL + V ++ Sbjct: 661 --LAQLFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSALVAKAKTVAAFNQL 711 >gi|149002871|ref|ZP_01827797.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS69] gi|237649565|ref|ZP_04523817.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae CCRI 1974] gi|237821555|ref|ZP_04597400.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae CCRI 1974M2] gi|147759165|gb|EDK66159.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS69] Length = 678 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 196/713 (27%), Positives = 330/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL + V+ DP R I++ ++ + G+ + Sbjct: 181 GRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKKIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVKTLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|114331843|ref|YP_748065.1| glycine--tRNA ligase [Nitrosomonas eutropha C91] gi|122313421|sp|Q0AEY2|SYGB_NITEC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|114308857|gb|ABI60100.1| glycyl-tRNA synthetase beta chain [Nitrosomonas eutropha C91] Length = 715 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 207/730 (28%), Positives = 343/730 (46%), Gaps = 74/730 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + K + ++ LK++ + + + +P RL ++L +S +P++I Sbjct: 16 PPKSLVKLGNAFATLIADSLKQQYLTTPDTVSTVFASPRRLAVHLTAISVQAPDQIVTLK 75 Query: 72 -GP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 P G A+ L + G++ ++ +K+ K ++ L+ Sbjct: 76 LMPVAVGLDAQGQPTPALHKKLAALGVENVAVSALKRVQEGKAEMLFLEQSVTGILLAAG 135 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ V AI+++P K M + +IRP ++ + ++I+ + Sbjct: 136 LQKAVDEAIRQLPVAKMMTYQ-LDDGWENVHFIRPAHGLIAL-----HGQQIVPISALGF 189 Query: 184 PCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGL 241 GN T GHRF A + + DHY LE V+ + RR+ I A L Sbjct: 190 AAGNTTRGHRFEAKQAELVIDHADHYEYILETEGTVIPGFDRRRSRIREGLETATRAAQL 249 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 + +ED LL+E+ LVE V MG+F +L +P+E + T+K NQK F +G L N Sbjct: 250 QCIEDAALLDEVTALVERPNVLMGTFSADFLEVPQECLISTMKINQKYFPLLDADGKLTN 309 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++VSNI +D G I+ GN RV+ +RL DA F+ D+ Sbjct: 310 RFLIVSNITPADPGQ-IIAGNERVIRSRLADAKFFFDHDR-------------------- 348 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI--DADVALVDRAIVLSK 419 + L R+ LD V++H ++G+QGER +R L + I QL+ A ++A +L+K Sbjct: 349 KRTLASRLPDLD--KVIYHHQLGSQGERTRYVRALAQIIGQLLDNGDLPAQANQAAMLAK 406 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL T++V EFPELQG +G+ YA + + + AIE+H KPR + +P + I V+L Sbjct: 407 ADLLTDMVGEFPELQGIMGRYYAQREGVDETIAFAIEDHYKPRFAGDALPRSMTGICVAL 466 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADKL+TLI+ ++I + P+G KDPYALRR LG+IRI++E + I L I Sbjct: 467 ADKLETLISLFSIGQFPTGDKDPYALRRHALGVIRILIEKDLPIGLDVLISRAAGVLRDE 526 Query: 532 --------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + L FF+DRL L D+ +E++L L I Sbjct: 527 ISGEQGPESSHARPVTPQLTEQLQDFFYDRLASSLRDQGYTVQEVESVLNLRPSLLCEIP 586 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + + F + + + KR+ IL K + ++ I L AE LY + Sbjct: 587 RRLAAVRAFTALPEAASLAAANKRVSNILK---KSEFDATVSIDKACLQAPAEIALYRAL 643 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 S+ + + + Y +L ++ PI+ FFDQV+VN ++ +R NRL+LL ++ Sbjct: 644 SEIESDARHAFQKGDYVTALQMLAALKAPIDAFFDQVMVNDENEVLRRNRLALLAALQAT 703 Query: 692 ILIVINVQKI 701 + V ++ ++ Sbjct: 704 MNRVADISRL 713 >gi|76787186|ref|YP_328994.1| glycyl-tRNA synthetase subunit beta [Streptococcus agalactiae A909] gi|77404951|ref|ZP_00782052.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae H36B] gi|77410621|ref|ZP_00786981.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae CJB111] gi|123758113|sp|Q3K3A9|SYGB_STRA1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|76562243|gb|ABA44827.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae A909] gi|77163336|gb|EAO74287.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae CJB111] gi|77176390|gb|EAO79158.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae H36B] Length = 679 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 203/713 (28%), Positives = 342/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + DVL Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLSVDD---IEFREVKGEEYVYVTKHETGKSAIDVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + V + ++ +P +M W+ ++F +IRP+ +++ +L ++ ++LD +I Sbjct: 132 S-VTEVLTELTFPVNMHWAN-----NSFEYIRPVHTLVVLL-----DDQALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G I+ GHRF ++ S Y DL + V+ D + R+ I+N H + + + Sbjct: 181 GRISRGHRFLGSDT-EISSASSYEDDLRQQFVIADAKERQQMIVNQIHAIEEKKNISVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI Sbjct: 240 DEDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQKL--------------------NI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLG---KKIAQLIDADVALVDRAIVLSKADL 422 + +L V FH KIG+ E + R++V+ + A L D + V RA + K DL Sbjct: 339 ADLVEKLKQ--VTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 397 LTGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------- 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + + Sbjct: 457 FDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDY 516 Query: 530 -EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 + ++ F R++ + + + D+ EA+L + + I++ + L + A+ + Sbjct: 517 ANQKEVMAFISARIEKMIGSK-VPKDIREAVLESDTYIVSLILEASQALVQKSKDAQYKV 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + S+ + EK LY I + H Sbjct: 576 SVESLSRAFNLAEK-----VTHSVLVDSSLFENNQEKALYQAILSLEL-------TEDMH 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D L ++ I FFD +V DD +++ NRL+LL + V + Sbjct: 624 DNLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALLNSLVAKARTVAAFNLL 676 >gi|182684433|ref|YP_001836180.1| glycyl-tRNA synthetase beta subunit [Streptococcus pneumoniae CGSP14] gi|238691171|sp|B2IQU1|SYGB_STRPS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|182629767|gb|ACB90715.1| glycyl-tRNA synthetase beta subunit [Streptococcus pneumoniae CGSP14] Length = 678 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 196/713 (27%), Positives = 329/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEEEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGQETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKTIEAERGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|168575932|ref|ZP_02721847.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae MLV-016] gi|194398749|ref|YP_002038109.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae G54] gi|238690835|sp|B5E642|SYGB_STRP4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|183578380|gb|EDT98908.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae MLV-016] gi|194358416|gb|ACF56864.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae G54] gi|332199520|gb|EGJ13595.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA41317] Length = 678 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|332073812|gb|EGI84290.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA41301] Length = 678 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 329/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ ++ + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKKIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLIY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|3861374|emb|CAA15273.1| GLYCYL-TRNA SYNTHETASE BETA CHAIN (glyS) [Rickettsia prowazekii] Length = 648 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 225/698 (32%), Positives = 345/698 (49%), Gaps = 63/698 (9%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVG 76 MQ A E I + +E + + ++ + P R+ L+ + K EE GP + Sbjct: 1 MQKNAEEGYLKIFTKIFEENEI-FAKVQVFAGPRRITLHATHVPKVILPKEEEIKGPSIE 59 Query: 77 AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVP 136 A + AI+GF ++ + + ++ K Y V + +R +++L I+ AI K Sbjct: 60 APEIAINGFCKAHNVSKLDLSTKLRNNK--LYYFFVKKTKERETKEILPKIIIDAINKYS 117 Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 W KSM W WIRPL++ILCI E I+ L + NITYGHR Sbjct: 118 WTKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLRFGHLSTNNITYGHRLTN 167 Query: 197 PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGL 256 +++ ++Y L E V+L+ R I LA+A L + +D L+EE+ GL Sbjct: 168 NKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDVCLIEEVTGL 227 Query: 257 VEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGA 316 E+ V +G +K+L LPEE+I ++T+QK F + G A F+ V N + + Sbjct: 228 SEFPIVLLGKIPQKFLELPEEVIVSVMRTHQKYFCLFDKNGSFAPYFLFVINGRFVNT-E 286 Query: 317 AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLD 376 I+QGN +V++ARL DAL+F+K D ++K L+ R+ +L Sbjct: 287 LIIQGNEKVLSARLADALYFYKND--------------------IAKTLESRLDKLK--S 324 Query: 377 VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGK 436 V+FH K+G+ E+V RI + + IA D + A L K+DL +++V EFP+LQG Sbjct: 325 VIFHTKLGSLKEKVDRITDICRYIAP----DNIDLIMAAKLCKSDLVSDMVGEFPDLQGI 380 Query: 437 IGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKP 496 +G YA + N AI +H KP+G +NVP+ + ++LADKLD+L+ + E P Sbjct: 381 MGYYYAKHEELNEEVAKAIRDHYKPQGLNDNVPSGNAT-LLALADKLDSLVGLIIVGETP 439 Query: 497 SGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------------EDQNLILFFHDRLK 543 +GS DPYALRR LGIIRII+ENK++I I ++I FF +R K Sbjct: 440 NGSGDPYALRRQALGIIRIIIENKLEINFINLISFSVSLYKVSSNSHLDSVISFFEERAK 499 Query: 544 LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 Y D LI A+L NL+ + L EF G++ L + KR+ I+ Sbjct: 500 FYFK-NDYDITLINAVLDL---NLVDTKFKLDTLKEFLVQDVGKQLLNAYKRVSNIM--- 552 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 N++I+ + + EK L+ VI I + +K Y + +LL S+ +PI Sbjct: 553 --GNQKITGLVDASLFSTQYEKELFEVIQKISQQIIVIIANKDYQKALNLLSSLLKPITS 610 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD VLVN D ++ NRLSLLQ + V ++ Sbjct: 611 FFDNVLVNDSDPKIAQNRLSLLQNTCEVFDKVAKFCRL 648 >gi|301794498|emb|CBW36937.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae INV104] Length = 678 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 329/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSELFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|149011706|ref|ZP_01832902.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP19-BS75] gi|147764137|gb|EDK71069.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP19-BS75] Length = 678 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLILSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|319744263|gb|EFV96628.1| glycyl-tRNA synthetase beta subunit [Streptococcus agalactiae ATCC 13813] Length = 679 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 198/712 (27%), Positives = 337/712 (47%), Gaps = 74/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL ++ K + + + DVL + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLSVDDIEF--REVKGEEYVYITKHETGKSAIDVLAS 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V + ++ +P +M W+ ++F +IRP+ +++ +L ++ ++LD +I G Sbjct: 133 -VTEVLAELTFPVNMHWAN-----NSFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I++ H + + + D Sbjct: 182 RISRGHRFLGSDT-EISSASSYEDDLRQQFVIADAKERQQMIVDQIHAIEEKKNISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNGNAGH-IENVIKGNEKVLVARLEDGEFFWQEDQKL--------------------NIA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLG---KKIAQLIDADVALVDRAIVLSKADLC 423 + +L V FH KIG+ E + R++V+ + A L D + V RA + K DL Sbjct: 340 DLVEKLKQ--VTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 398 TGMVDEFDELQGIMGEKYALLAGEKPAVAAAIREHYMPTSADGELPETRVGAILALADKF 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------------- 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + + Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDYA 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ F R++ + + + D+ EA+L + + I++ + L + A+ + Sbjct: 518 NQKEVMAFISARIEKMIGSK-VPKDIREAVLESDTYIVSLILEASQALVQKSKDAQYKVS 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + S+ + EK LY I + H Sbjct: 577 VESLSRAFNLAEK-----VTHSVSVDSSLFENNQEKALYQAILSLEL-------TEDMHD 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D L ++ I FFD +V DD +++ NRL+LL + V + Sbjct: 625 NLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALLNSLVAKARTVAAFNLL 676 >gi|94994891|ref|YP_602989.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS10750] gi|229558580|sp|Q1J5E1|SYGB_STRPF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94548399|gb|ABF38445.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS10750] Length = 679 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 199/713 (27%), Positives = 342/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ + +A G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L F+ Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NDQAIENVIKGNEKVLVARLEDGEFFWREDQKLQ--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV---DRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A+ + V DRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYARLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + + D+ EA+L + ++ + L + + + Sbjct: 517 ANKADVMNFIRARVDKMM-GKAVPKDIREAVLESSTFVVPEMLAAAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAA------- 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + + ++ I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 624 QQLEQVFALSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKAIAAFNQL 676 >gi|312867828|ref|ZP_07728033.1| glycine--tRNA ligase, beta subunit [Streptococcus parasanguinis F0405] gi|311096583|gb|EFQ54822.1| glycine--tRNA ligase, beta subunit [Streptococcus parasanguinis F0405] Length = 678 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 200/713 (28%), Positives = 336/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSNLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKPAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P SM W+ + F +IRP+ ++ +L ++ +DLD +I Sbjct: 132 G-IPEVLASMTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----GDEALDLDFLDIKS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLGHE-VEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGQLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEETAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L EN + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGENAAVATAIREHYLPDSADGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ + L+E + + Sbjct: 517 DNQAEVLNFIKARVDKMMG--RTPKDIKEAVLAGSNFVVADMLEAAEALSEAAKTDGYKA 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + + EK L S Sbjct: 575 AVESLSRAFNLAEKA-----DASVAVDANLFENDQEKALAQAAESLELTGSASDK----- 624 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V +D V++NRL+LL + V ++ Sbjct: 625 --LAQLFALSPVIDAFFDNTMVMAEDEAVKNNRLALLAGLVAKANNVAAFNQL 675 >gi|15620457|gb|AAL03854.1| glycyl-tRNA synthetase beta chain [Rickettsia conorii str. Malish 7] Length = 674 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 228/702 (32%), Positives = 348/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ L + K EE G Sbjct: 23 IPAFMQKNAEEGYLNIFTKIFEENEI-FAKVQVFVGPRRITLHATHLPKITLPKEEEIKG 81 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 82 PSIEAPEAAINGFCKAHNVSKLELPT--KLISNQLYYFFVKKTEEREIKEILPEIIIEAI 139 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ + + NITYGH Sbjct: 140 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYGH 189 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I LAS+ L + ED L+EE Sbjct: 190 RLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELASSHELIIKEDNRLVEE 249 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 ++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + + Sbjct: 250 VVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFT 309 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F K+D ++K L+ R+ +L Sbjct: 310 NA-ELVIQGNEKVLSARLSDALYFCKQD--------------------IAKTLESRLGQL 348 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHAK+G E++ RI + IA + + A L K+DL +E+V EFP+ Sbjct: 349 E--AVTFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVGEFPD 402 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +N+P+ ++ +LADKLD+L+ Sbjct: 403 LQGIMGYYYAKHEGLNAEIAAAIRDHYKPQGLSDNLPSGNAALL-ALADKLDSLVGLMIA 461 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-------------LILFFH 539 E P+GS DPYALRR LGIIRIILENK+++ + I +I FF Sbjct: 462 GETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFE 521 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y D LI A+L NL+ + L EF G++ L + KR I Sbjct: 522 ERAKFYFK-NDYDIALINAVLDL---NLVDTNFKLDALKEFLIEDAGKQLLNAYKRASNI 577 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 578 I-----GDQKITGLVDASLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSLLT 632 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ I + V ++ Sbjct: 633 PITSFFDNVLVNDSDPKIAQNRLSLLQNICELFDKVAKFNRL 674 >gi|55738463|gb|AAV62104.1| glycyl-tRNA synthetase beta subunit [Streptococcus thermophilus CNRZ1066] Length = 714 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 200/713 (28%), Positives = 336/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 51 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 110 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 111 SKKIALDADGNFSKAAQGFVRGKGLTIDD---IEFREVKGEEYVYVTKHEAGKSAKEVLA 167 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P SM W+ ++F +IRP+ +++ +L ++ ++LD I Sbjct: 168 G-IPEVLASLTFPVSMHWAN-----NSFEYIRPVHTLIVLL-----GDEALELDFLGIKS 216 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 217 GRVSRGHRFLGHE-VEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 275 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI Sbjct: 276 EEGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFIS 335 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ + Sbjct: 336 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KI 374 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 375 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDL 432 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 433 LTGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADK 492 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 493 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 552 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +I F R+ + D+ EA+L N + +++ + L+E + + Sbjct: 553 DNQAEVIRFIKARVDKMMGS--TPKDIKEAVLSGSNFVVADMLEAAEALSEAAKTDGYKA 610 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + + EK L S Sbjct: 611 AVESLSRAFNLAEKA-----DTSVAVDASLFENDQEKALAQAAESLELTGSASDK----- 660 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + I+ FFD +V DD V++NRL+LL + V ++ Sbjct: 661 --LAQLFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSALVAKAKTVAAFNQL 711 >gi|195977628|ref|YP_002122872.1| glycyl-tRNA synthetase subunit beta [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974333|gb|ACG61859.1| glycyl-tRNA synthetase beta chain GlyS [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 680 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 325/713 (45%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + Y + + TP RL + + GL+ + E+ GP Sbjct: 16 PAYVVTPSEKQLVQRMTDFLKANRLSYNAIEGFSTPRRLAVRVLGLADQQTDLTEDFKGP 75 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + +DVL Sbjct: 76 SKKIALDADGQFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKQAKDVLA 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ ++F +IRP+ S++ +L ++ ++LD +I Sbjct: 133 A-VPEVLASLTFPVSMHWAN-----NSFDYIRPVHSLIVLL-----DDEPLELDFLDIHS 181 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G I+ GHRF + S D Y DL V+ + R+ I+ + + +++ Sbjct: 182 GRISRGHRFLGEET-SITSADSYEADLRSQFVIASAKERQEMIIAQIRAIEAEQKVQVDI 240 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D++LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 241 DENLLNEVLNLVEYPTAFMGSFDPKYLEIPEEVLVTSMKNHQRYFVVRDQAGKLMPNFIS 300 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A +++GN +V+ ARLED FW+ DQ + Sbjct: 301 VRNGNAKH-LQNVIKGNEKVLVARLEDGEFFWREDQKL--------------------SI 339 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L V FH KIG+ E + R +V+ +A A+ + V RA + K DL Sbjct: 340 EDLVAKL--AHVTFHEKIGSLAEHMDRTKVIAAFLADQAGLSEAEKSAVARAAQIYKFDL 397 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P K+ ++LADK Sbjct: 398 LTGMVGEFDELQGIMGEKYALLAGEAAAVATAIREHYLPDSAEGELPETKVGAVLALADK 457 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + Sbjct: 458 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEHFGWSIPMDKLIDSLYELSFDSLTY 517 Query: 529 IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + I D+ EA+L + + ++ K L + Sbjct: 518 QHKAEVLDFICARVDKMMGS-AIPKDIREAVLASSSFVVPEMLARAKALVAASQLDTYKP 576 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R+F + I + E+ L + + Sbjct: 577 AVESLSRVFNLAKKAVDAVL-----IDASLFENDYERALAQAVDSL-------VLSGSAK 624 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I+ FFD +V +D +R NRL+LL + + + ++ Sbjct: 625 EQLAQVFALSPVIDDFFDHTMVMTEDEAIRRNRLALLAELVTKVQTIAAFDRL 677 >gi|85714237|ref|ZP_01045225.1| glycyl-tRNA synthetase beta subunit [Nitrobacter sp. Nb-311A] gi|85698684|gb|EAQ36553.1| glycyl-tRNA synthetase beta subunit [Nitrobacter sp. Nb-311A] Length = 884 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 252/572 (44%), Positives = 348/572 (60%), Gaps = 59/572 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFVTPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP++GA A+ GFL++ GL+++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 ARQPDLKDERKGPKLGAPDAAVQGFLKAAGLKSLEEAKIQRDPKKGDFYVALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL +PV ++ PWPK MRW + A +W+RPL SI+ E + ++ ++ Sbjct: 121 IEVLAEFLPVIVRTFPWPKQMRWGERSAKPGALTWVRPLHSIIATFGMETEEPDVVPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP V+ + Y L+ A V+LD R++ IL DA LA A G Sbjct: 181 AGITAGQVTRGHRFMAPDEFSVRRFEDYEAKLQAAKVVLDSARRKDIILADAKELAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE---- 296 EL+ED+ LL+E+ GLVEW V MGSFD+++L +P E+IR TI+ NQKCFV R Sbjct: 241 FELIEDQVLLDEVAGLVEWPVVLMGSFDEEFLSIPGEVIRATIRNNQKCFVVRRSHPLLE 300 Query: 297 ---------------------------------GVLANCFILVSNIQASDGGAAIVQGNS 323 LAN FILV+NI+ASDGG AIV GN Sbjct: 301 GEGRSRSERGEVSITPSRSSPSAQIDLPPQGGGEKLANKFILVANIEASDGGNAIVAGNE 360 Query: 324 RVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKI 383 RV+ ARL DA F++ D L L+ R+ + + +VFH K+ Sbjct: 361 RVIRARLSDAKFFYETD--------------------LKTKLEDRLPKFEQ--IVFHEKL 398 Query: 384 GTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAV 443 GTQ ER++RI L +IA L+ ADV RA L KADL TE+V EFPELQG +GK YA+ Sbjct: 399 GTQAERIARIERLAAEIAPLVGADVEKAKRAARLCKADLLTEVVGEFPELQGLMGKYYAL 458 Query: 444 LQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPY 503 Q E+ S A EEH KP+GP + VP++ +SI V+LADK+DTL+ FWAI+EKP+GSKDPY Sbjct: 459 AQGEDASVAAACEEHYKPQGPTDRVPSDPVSIAVALADKIDTLVGFWAIDEKPTGSKDPY 518 Query: 504 ALRRATLGIIRIILENKIDIPLSQFIEDQNLI 535 ALRRA LG+IR++LEN+I L+ I+ ++ Sbjct: 519 ALRRAALGVIRLVLENEIRSNLTSIIDMATVL 550 Score = 176 bits (447), Expect = 8e-42, Method: Composition-based stats. Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 1/139 (0%) Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLE 622 D+LL IV ++ L +F + G+ L KR ILAIEEKK++ L+ Sbjct: 744 QDDLLMIVRRVEALGKFLDTDDGKNLLAGTKRASNILAIEEKKDKRSFDGAPDASLYSLD 803 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 EK L A I + ++ ++ + + + ++ FFD+V VN DD ++R+NRL Sbjct: 804 EEKALAAAIDEAKREASVAVANEDFAAAMSAMAKLRPAVDAFFDKVKVNDDDAKIRENRL 863 Query: 683 SLLQYIKNIILIVINVQKI 701 LL I+ V + +I Sbjct: 864 RLLNEIRAATRTVADFSRI 882 Score = 38.9 bits (89), Expect = 3.5, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 24/37 (64%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 +L+ FF DRLK+ L ++ RHDL++A+ + + L Sbjct: 647 DLLAFFADRLKVQLREQGARHDLVDAVFALSSTSPLR 683 >gi|322376926|ref|ZP_08051419.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. M334] gi|321282733|gb|EFX59740.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. M334] Length = 678 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 194/713 (27%), Positives = 327/713 (45%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + L+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMTAFLKENRLSFEAIQTFSTPRRLAVRVTDLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEEEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGKETK-IQSALSYEEDLRAQFVIADPREREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A ++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNAEHLKNV-IKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFNSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLVGSNFVVADMLEAASALVEASKEENFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDHEKSLAEAVDTLVLSGTAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L ++ + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSHLTQKAAKLARFNQI 675 >gi|226939677|ref|YP_002794750.1| glycyl-tRNA synthetase subunit beta [Laribacter hongkongensis HLHK9] gi|226714603|gb|ACO73741.1| GlyS [Laribacter hongkongensis HLHK9] Length = 692 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 207/726 (28%), Positives = 350/726 (48%), Gaps = 61/726 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKG 58 M L+E+++EE+P + + E + ++ L G++ N + +P RL + + Sbjct: 1 MTTLLVELFTEELPPKALKRLGESFADVIRAELARAGLLEDNAVATAWASPRRLAVSIDH 60 Query: 59 LSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYL 110 + +P++ + E++ P G A+ L + G+ + Q ++ P K + + Sbjct: 61 VRATAPDRDVTEKIMPVAVALAADGQPSPALRKKLEARGIALDAVAQFERRPDGKHETFF 120 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 + D L V +++K+P PK M W + +++RP+ ++ + +E Sbjct: 121 YTYTAAGARLADELPRAVQESVRKLPIPKVMHWGDSD-----VTFVRPVHKLVALYGSE- 174 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAIL 229 IID ++ + IT GHRF + I + + Y R LE+ V+ + RR I Sbjct: 175 ----IIDCEVLGLFSDRITGGHRFLSEGDISLPDAESYARVLEQEGRVVAGFDDRRERIR 230 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A + + D LL+E+ LVEW V F+ ++L +P+E + LT++ NQK Sbjct: 231 AGLDAAARRLNATIAADDALLDEVTALVEWPVVLEAGFEAEFLKVPQECLILTMQQNQKY 290 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L N F+LVSN++ +D + I++GN RV+ ARL DA F+++DQ Sbjct: 291 FPLLDANGRLMNRFLLVSNLETAD-PSHIIKGNERVLRARLSDAKFFFEQDQ-------- 341 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 + L+ R+ RL DVV+H ++G+Q ER R+ VL IA+ + AD A Sbjct: 342 ------------KQKLEARIPRL--ADVVYHNQLGSQLERTERLAVLAGDIARALGADAA 387 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + +RA L+KADL T++V EFPELQG +G+ YA++ E DAIE H PR +++P Sbjct: 388 IAERAARLAKADLLTDMVGEFPELQGVMGRYYALIDGELPIVADAIEGHYHPRFAGDSLP 447 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL---- 525 I+ V+LADKL+ L W I P+G KDP+ LRR LG++R+++ ++D+ Sbjct: 448 DGDIATAVALADKLEMLTGIWGIGLVPTGDKDPFGLRRQALGVMRMLMNARLDLKALLER 507 Query: 526 ---------SQFIEDQNLILFFHDRLKLYLH-DRDIRHDLIEAILRPENDNLLTIVDLIK 575 L +F +RLK L D R D ++A+L E + + ++ Sbjct: 508 AVATFPAGKLAADTAPALYVFMLERLKNLLTADAATRADEVDAVLALEPGHFDEVPAVLA 567 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KR+ IL K E+ + L AE L+ I Sbjct: 568 AVAAFRALPEAAALAAANKRVKNILK---KVEGELPTGVDAALLTEAAETELWQSIDAVL 624 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + + Y L + P++ FFD V+V DD VR NRL+LL + + V Sbjct: 625 PTVEAAFAARDYATALSRLAVLKVPVDAFFDGVMVMADDAAVRANRLALLARLAGLFNRV 684 Query: 696 INVQKI 701 ++ + Sbjct: 685 ADISLL 690 >gi|161723838|ref|NP_360953.2| glycyl-tRNA synthetase subunit beta [Rickettsia conorii str. Malish 7] gi|125987862|sp|Q92G11|SYGB_RICCN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS Length = 664 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 228/702 (32%), Positives = 348/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ L + K EE G Sbjct: 13 IPAFMQKNAEEGYLNIFTKIFEENEI-FAKVQVFVGPRRITLHATHLPKITLPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 72 PSIEAPEAAINGFCKAHNVSKLELPT--KLISNQLYYFFVKKTEEREIKEILPEIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ + + NITYGH Sbjct: 130 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I LAS+ L + ED L+EE Sbjct: 180 RLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELASSHELIIKEDNRLVEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 ++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + + Sbjct: 240 VVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFT 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F K+D ++K L+ R+ +L Sbjct: 300 NA-ELVIQGNEKVLSARLSDALYFCKQD--------------------IAKTLESRLGQL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHAK+G E++ RI + IA + + A L K+DL +E+V EFP+ Sbjct: 339 E--AVTFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +N+P+ ++ +LADKLD+L+ Sbjct: 393 LQGIMGYYYAKHEGLNAEIAAAIRDHYKPQGLSDNLPSGNAALL-ALADKLDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-------------LILFFH 539 E P+GS DPYALRR LGIIRIILENK+++ + I +I FF Sbjct: 452 GETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y D LI A+L NL+ + L EF G++ L + KR I Sbjct: 512 ERAKFYFK-NDYDIALINAVLDL---NLVDTNFKLDALKEFLIEDAGKQLLNAYKRASNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 568 I-----GDQKITGLVDASLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSLLT 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ I + V ++ Sbjct: 623 PITSFFDNVLVNDSDPKIAQNRLSLLQNICELFDKVAKFNRL 664 >gi|76798315|ref|ZP_00780561.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 18RS21] gi|76586345|gb|EAO62857.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 18RS21] Length = 679 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 203/713 (28%), Positives = 342/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQIFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + DVL Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLSVDD---IEFREVKGEEYVYVTKHETGKSAIDVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + V + ++ +P +M W+ ++F +IRP+ +++ +L ++ ++LD +I Sbjct: 132 S-VTEVLTELTFPVNMHWAN-----NSFEYIRPVHTLVVLL-----DDQALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G I+ GHRF ++ S Y DL + V+ D + R+ I+N H + + + Sbjct: 181 GRISRGHRFLGSDT-EISSASSYEDDLRQQFVIADAKERQQMIVNQIHAIEEKKNISVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI Sbjct: 240 DEDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQKL--------------------NI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLG---KKIAQLIDADVALVDRAIVLSKADL 422 + +L V FH KIG+ E + R++V+ + A L D + V RA + K DL Sbjct: 339 ADLVEKLKQ--VTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 397 LTGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------- 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + + Sbjct: 457 FDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDY 516 Query: 530 -EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 + ++ F R++ + + + D+ EA+L + + I++ + L + A+ + Sbjct: 517 ANQKEVMAFISARIEKMIGSK-VPKDIREAVLESDTYIVSLILEASQALVQKSKDAQYKV 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + S+ + EK LY I + H Sbjct: 576 SVESLSRAFNLAEK-----VTHSVLVDSSLFENNQEKALYQAILSLEL-------TEDMH 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D L ++ I FFD +V DD +++ NRL+LL + V + Sbjct: 624 DNLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALLNSLVAKARTVAAFNLL 676 >gi|332200920|gb|EGJ14991.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA47901] Length = 678 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPVVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSELFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|319943023|ref|ZP_08017306.1| glycyl-tRNA synthetase beta subunit [Lautropia mirabilis ATCC 51599] gi|319743565|gb|EFV95969.1| glycyl-tRNA synthetase beta subunit [Lautropia mirabilis ATCC 51599] Length = 737 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 206/749 (27%), Positives = 338/749 (45%), Gaps = 92/749 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIY---QNMRQYWTPHRLFLYLKGLSPHSPEKIEER 70 P + A+ + + L ++ + Y TP RL + L G+ + + + Sbjct: 20 PPHALTRLADSFAQGIRTRLATRQLLTNEDAHPDIYATPRRLAVRLPGVRAQADAREIQI 79 Query: 71 LGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 GP V G A+ + G + + + K DV+ +P ++ DV Sbjct: 80 KGPSVAVGLDAQGQPTMALIKWAEKQGAEVSA--LTRGHDGKQDVFYWSSTQPGAVLADV 137 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 + I+ + ++P PK M + ++ S++RP ++ + + ++ + + Sbjct: 138 IGEIIVETLAQLPIPKFMTYQLADG-LTTVSFVRPAHRLVVL-----HGDTVLPCTILGL 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 IT GHRF + PI +++ D Y R L + V + + RR I N+ + G Sbjct: 192 AADRITDGHRFLSSGPITLENADSYARQLREQGHVEPEYQARRVMIANELAHSSQQNGGI 251 Query: 243 LVEDKD-------LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 L + + LL+E+ LVEW V+ G FD +L +P+E + L+++TNQ+ F Sbjct: 252 LAVNDEEQQQVTALLDEVAALVEWPAVYTGQFDPAFLAVPQECLILSMRTNQRYFPLFET 311 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N F++VSN++ D + I+ GN RVV RL DA F+ +D+ Sbjct: 312 NGKLKNQFLIVSNMRIDD-PSGIIDGNERVVRPRLADAQFFFDQDRRE------------ 358 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L R+ +L VV+HA++GTQ ER RIR L +A A VA +RA Sbjct: 359 --------TLASRLPQL--AQVVYHARLGTQAERSERIRRLAAALAPATGASVADAERAA 408 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+K DL T +V EFPELQG +G+ YA E+ + DAI EH +PR + +P + + Sbjct: 409 QLAKTDLLTGMVGEFPELQGTMGRYYARHDGESEAVADAIAEHYQPRFAGDALPASPTGL 468 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 ++LADKL+TL W I ++P+G KDP+ALRR LG++RI++E K+ + L +E Sbjct: 469 ALALADKLETLAGIWGIGQRPTGDKDPFALRRHALGVVRILIEGKLTLSLPALLEQAFSV 528 Query: 532 --------------------------------------QNLILFFHDRLKLYLHDRDIRH 553 L F DRL+ YL DR Sbjct: 529 FDKLPAPAAADTEPSDKAAATGKKGRKEAVPQPFTADVPGLSAFVADRLRSYLRDRGFAG 588 Query: 554 DLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI-EEKKNREISL 612 IEA+L D L + + L F E + KRI IL + + Sbjct: 589 TDIEAVLATGLDRLDLLEARLAALAAFRRLPAFESLTAANKRIGNILRKSAGEGAADDKA 648 Query: 613 EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNV 672 + P L AE+ L + +Q + + + L ++ P++ FF+QV+VN Sbjct: 649 SVDPALLKEAAERDLNDALVKLQPQVQAHLQQQDFTAALQALAALQAPVDAFFEQVMVNA 708 Query: 673 DDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D +R NRL+LL + ++ V ++ ++ Sbjct: 709 EDPALRRNRLALLGGLHALMNRVADLSQL 737 >gi|225620191|ref|YP_002721448.1| glycyl-tRNA synthetase subunit beta [Brachyspira hyodysenteriae WA1] gi|225215010|gb|ACN83744.1| glycyl-tRNA synthetase, beta subunit [Brachyspira hyodysenteriae WA1] Length = 697 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 190/740 (25%), Positives = 336/740 (45%), Gaps = 82/740 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+EI EEIPA + A+ I+ LK G+ + + Y TP RL + + + Sbjct: 1 MKDLLIEILVEEIPADFAYPASVSFKKIIENTLKNNGINFSTVNSYTTPRRLAVLAENIE 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTIS----------DCQIKKDPK 104 S +++ E GP + GA KA +GFL+S + S D K+ Sbjct: 61 EKSKDEVIEFRGPLFESAFKDGAPTKAGEGFLKSHNIDANSIKNIDENESFDKPYIKEVN 120 Query: 105 KGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILC 164 K + + + + + + + K MRW F+++RP++++L Sbjct: 121 GKKYIFVKKEKKGIETKKLFEEKLESIVSSIDFKKKMRWGNKD-----FAFVRPIRNVLA 175 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECR 224 + +II + I N GHR +P ++ + Y + L E V++ E R Sbjct: 176 LF-----GNEIIKTSVAGIETNNKVTGHRLLSPEFKEINNPKDYEKTLAEKHVVVSREKR 230 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 I+N + G E V K + E ++ LVE + FD K+L +P+E++ + Sbjct: 231 LENIINQLENIEKEHGYEAVSKKKVSEIVVDLVEEPYLLTAEFDSKFLEVPKEVLTSEMI 290 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 +QK F ++G L N F++ +N + I+ GN RV+ ARL D ++ D Sbjct: 291 EHQKYFPLCKKDGTLTNLFVITANQPKTPQ---IIAGNIRVLTARLSDGRFLYQED---- 343 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 + K +D+ RL+M ++F ++G+ ++V R+ + + +L+ Sbjct: 344 ----------------IRKGMDEMNERLEM--LMFRKELGSVADKVKRLEKNSELLIKLL 385 Query: 405 D--ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 D + +AI K+DL + +V FPELQG +G +A N N AI E +P Sbjct: 386 GYEKDKENILKAIKYMKSDLVSNMVYNFPELQGIMGGYFAKSMNLNDDVALAINEQYRPL 445 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 + +P+N +++ DK+D + + + + P+GS+DP ALRR LGII I+ ++K Sbjct: 446 FAADEIPSNDTGKAIAILDKMDNIAAGFYVGDIPTGSQDPNALRRQALGIINILTKSKKH 505 Query: 523 IPLSQFIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 I L + IED +++ FF R + D D D + +L Sbjct: 506 INLKKLIEDAINSMPKDARNNKSEDLVKDIFEFFKSRFEN---DIDFAKDSVAGVLSTGI 562 Query: 565 DNLLTIVDLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 D++ I+ ++ F + LL KRI ++ + + + L E Sbjct: 563 DDMYDAYLKIEAIDAFRKKNEELFSNLLLVFKRIKNMIKSAK------DVNLDESLLKEE 616 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 AEK LY + + + M+++ Y + LL S+ EP++ FF ++VNVDD ++++NR+ Sbjct: 617 AEKSLYNTYKEKLNEVNKLMENREYEKTFALLASLYEPLDKFFKDIMVNVDDEKIKNNRI 676 Query: 683 SLLQYIKNIILIVINVQKIV 702 +LL + I +++ +V Sbjct: 677 ALLSSVDKIFKNMLDFSSLV 696 >gi|28895307|ref|NP_801657.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes SSI-1] gi|161485738|ref|NP_665275.2| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS315] gi|73919751|sp|Q8K663|SYGB_STRP3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28810553|dbj|BAC63490.1| putative glycyl-tRNA synthetase, beta subunit [Streptococcus pyogenes SSI-1] Length = 679 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 199/713 (27%), Positives = 340/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLAAQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ + +A G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L F+ Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NDQAIENVIKGNEKVLVARLEDGEFFWREDQKLQ--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV---DRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A+ + V DRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYARLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + + D+ EA+L + ++ + L + + + Sbjct: 517 ANKADVMNFIRARVDKMM-GKAVPKDIREAVLESSTFVVPEMLAAAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVHVDPSLFENEQENTLFAAIQGLTLAGSAA------- 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + + + I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 624 QQLEQVFVLSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|168493376|ref|ZP_02717519.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC3059-06] gi|183576507|gb|EDT97035.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC3059-06] Length = 678 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKASLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|218960932|ref|YP_001740707.1| putative glycine tRNA synthetase, beta subunit [Candidatus Cloacamonas acidaminovorans] gi|167729589|emb|CAO80501.1| putative glycine tRNA synthetase, beta subunit [Candidatus Cloacamonas acidaminovorans] Length = 698 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 215/729 (29%), Positives = 336/729 (46%), Gaps = 71/729 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ EE+P R A +S LK + + + TP R++L L H Sbjct: 6 FLLELGCEELPERQIEIACNGVSSSFGTFLKSNKLYCGSYKVSGTPRRIYLDALELDTHQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFL-RSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ + GP V G A GFL RS ++ +KG K Sbjct: 66 EDEEILKTGPLVSVAYDEEGNLTPAGKGFLNRSQ---AKEAAIFIQETEKGKFLAVKYIK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++LK+ +P I ++P+ K M WS + RPL+ L + + Sbjct: 123 KGLATVELLKSWIPEMIVQIPFEKKMAWSQL-----GLIFSRPLRWFLILW-----NNRP 172 Query: 176 IDLDLKEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++LD IPCGNITYG+RF I + + Y+ L E V++D E RR I+ Sbjct: 173 LELDFGGIPCGNITYGNRFLGLEKSITINKAEDYLPKLLEQKVIVDIEERRKEIITQLAA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + +++ED++L+E ++ LVE+ +G F++KYL LP+++I TI QK F + Sbjct: 233 IFPEDNFKVIEDRELVETVVNLVEYPTAVVGEFEEKYLSLPDKIIISTISQAQKYFAVQD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N F+ +SN S I +GN +VV ARL DAL +W D Sbjct: 293 NQGKLSNKFVFISNGNPS-ASMIIRKGNEKVVKARLADALWYWNEDT------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVALV 411 PL+ LD V+F AK+GT ++ RI L +A + + Sbjct: 339 -------KYPLEHWTRHLD--KVIFQAKLGTMADKTKRIMQLVSALADELKITEEQKKKA 389 Query: 412 DRAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 R L KADL T ++ +EF +LQG IGK+YA+ E+ + I EH PRG + +P Sbjct: 390 IRCAELCKADLVTNMLGEKEFTKLQGYIGKQYAIASGEDREIAEGIFEHYLPRGSGDELP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + V++ADK+DT+ I P+GS DP+ALRRA G+++II K D+ L F Sbjct: 450 STLCGAIVAIADKMDTVAGIIGIGMMPTGSGDPFALRRAANGVVQIISSRKWDLDLFSFA 509 Query: 530 ED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +NL F R+ L I +D+IE+++ + +L + + Sbjct: 510 DRALELIGKQTELDKKAKKNLHSFLEQRITGLLKTNGIAYDVIESVMHIDKSHLHDLENR 569 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + LN ++ KR+ I+A + + + L+ E LY + Sbjct: 570 AQALNALKGKEDFIHLVIGFKRVANIIA-----ETQDFVPFNKDKLVEPEEINLYEALQT 624 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 I ++ +K Y L + I+ FFD VLVN +D E+R+NR SLL+ +K L Sbjct: 625 LHQDIDSALQNKDYPLALQYLIKFGKVIDAFFDAVLVNCEDDELRNNRHSLLKEVKKEFL 684 Query: 694 IVINVQKIV 702 V ++ IV Sbjct: 685 RVADLSLIV 693 >gi|87302811|ref|ZP_01085622.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 5701] gi|87282694|gb|EAQ74652.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 5701] Length = 722 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 183/752 (24%), Positives = 313/752 (41%), Gaps = 83/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+PA A L + L + + + + TP RL + + L Sbjct: 1 MATFLLEIGTEELPADFARLALPQLEQQVRHDLAAQRLPHGLVEATSTPRRLVVRVADLP 60 Query: 61 PHSPEKIEERLGPR------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + EER GP G A GF G+ S +D KG A L Sbjct: 61 LSQDDLAEERKGPPGGQAFVDGQPGPAAIGFANRCGVDPASLEL--RDTPKGPFVFARLL 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P R ++VL +P I + + MRW + RP++ ++ +L + Sbjct: 119 QPGRPSKEVLAECIPAWIAGLQGRRFMRWGEGE-----LRFSRPVRWLVALLDQQVI-PV 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ I G I+ GHR + + + + L EA VL++ + R + I Sbjct: 173 VLEGSDPLISSGRISRGHR-LSEQTLTIPDAGLHSELLAEAGVLVERQQRADWIRQQVLA 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 ASA ++L EE++ LVE + GS + ++L LP E++ ++++Q+ R Sbjct: 232 AASAAQARPDLPEELFEELVDLVESPSLIEGSVEPRFLNLPPEVLSTVMRSHQRYVPLRR 291 Query: 295 -----------REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 + L F+ + N + A + +GN RV+ ARL DA F + D+ Sbjct: 292 LDAAEDPLALSAQASLLPRFLCIGNGLPA-AAATVRRGNERVLKARLADAEFFLQADRAI 350 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 +QR RL V F +G+ +R R+ L + + Q Sbjct: 351 SC--------------------EQRRERL--ASVTFAEGLGSLLDRSDRLLWLSELLLQH 388 Query: 404 IDADVALVD---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 + + RA L K DL +++V EFPELQG +G +YA+ + E+ + A+ EH Sbjct: 389 LSLTRDHQEAALRAAHLCKHDLVSQMVGEFPELQGVMGAKYALAEGESRAVALAVLEHYL 448 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PRG + P++ V+LA++L+ L++ +A E+PSGS DPYALRRA G+++I+ E Sbjct: 449 PRGAGDLPPSSDAGAVVALAERLELLLSIYAKGERPSGSSDPYALRRAGNGVLQILWERG 508 Query: 521 IDIPLSQFIEDQ--------------------NLILFFHDRLKLYLHDRDIRHDLIEAIL 560 + L ++ L+ R+ L + DL++A+ Sbjct: 509 WSLNLINLLKQASAHWAQLLPDLQLDAPSLAGELVEALRLRMVSLLDEEGFDADLVQAVA 568 Query: 561 RPEN------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE- 613 + + + L + + +R ++ + +S Sbjct: 569 GDGVPAERLLGDPIDGRKRVALLAQLRVDGQLAPVQAVVQRAARLAVKGDLPVDVLSPTA 628 Query: 614 -ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVL 669 + P +E + V+ + + RY Q+ L E + FFD V+ Sbjct: 629 VVDPALFSSPSEAGMLQVLQELDPILSLPDGEIRYRQLASKLAEGAEALSAFFDGASSVM 688 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V DD VR NRL+LL ++N ++ + K+ Sbjct: 689 VMCDDPAVRRNRLNLLAVLRNQASVLADFSKL 720 >gi|25010334|ref|NP_734729.1| glycyl-tRNA synthetase subunit beta [Streptococcus agalactiae NEM316] gi|81446313|sp|Q8CX30|SYGB_STRA3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|23094686|emb|CAD45905.1| glycyl-tRNA synthetase (beta subunit) [Streptococcus agalactiae NEM316] Length = 679 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 202/713 (28%), Positives = 342/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + DVL Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLSVDD---IEFREVKGEEYVYVTKHETGKSAIDVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + V + ++ +P +M W+ ++F +IRP+ +++ +L ++ ++LD +I Sbjct: 132 S-VTEVLTELTFPVNMHWAN-----NSFEYIRPVHTLVVLL-----DDQALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G I+ GHRF ++ S Y DL + V+ D + R+ I++ H + + + Sbjct: 181 GRISRGHRFLGSDT-EILSASSYEDDLRQQFVIADAKERQQMIVDQIHAIEEKENISVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI Sbjct: 240 DEDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQKL--------------------NI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLG---KKIAQLIDADVALVDRAIVLSKADL 422 + +L V FH KIG+ E + R++V+ + A L D + V RA + K DL Sbjct: 339 ADLVEKLKQ--VTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 397 LTGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------- 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + + Sbjct: 457 FDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDY 516 Query: 530 -EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 + ++ F R++ + + + D+ EA+L + + I++ + L + A+ + Sbjct: 517 ANQKEVMAFISARIEKMIGSK-VPKDIREAVLESDTYIVSLILEASQALVQKSKDAQYKV 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + S+ + EK LY I + H Sbjct: 576 SIESLSRAFNLAEK-----VTHSVSVDYSLFENNQEKALYQAILSLEL-------TEDMH 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D L ++ I FFD +V DD +++ NRL+LL + V + Sbjct: 624 DNLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALLNSLVAKARTVAAFNLL 676 >gi|161611293|ref|YP_139030.2| glycyl-tRNA synthetase subunit beta [Streptococcus thermophilus LMG 18311] Length = 678 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 199/713 (27%), Positives = 336/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKSAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P SM W+ ++F +IRP+ +++ +L ++ ++LD I Sbjct: 132 G-IPEVLASLTFPVSMHWAN-----NSFEYIRPVHTLIVLL-----GDEALELDFLGIKS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +++ + D Y DL V+ + + R N I + + G+++ Sbjct: 181 GRVSRGHRFLGHE-VEITNADSYEEDLRTVYVIANSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +I F R+ + D+ EA+L N + +++ + L+E + + Sbjct: 517 DNQAEVIRFIKARVDKMMGS--TPKDIKEAVLSGSNFVVADMLEAAEALSEAAKTDGYKA 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + + EK L S Sbjct: 575 AVESLSRAFNLAEKA-----DTSVAVDASLFENDQEKALAQAAESLELTGSASDK----- 624 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + I+ FFD +V DD V++NRL+LL + V ++ Sbjct: 625 --LAQLFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSALVAKAKTVAAFNQL 675 >gi|77414048|ref|ZP_00790218.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 515] gi|77159890|gb|EAO71031.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 515] Length = 679 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 202/713 (28%), Positives = 342/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + DVL Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLSVDD---IEFREVKGEEYVYVTKHETGKSAIDVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + V + ++ +P +M W+ ++F +IRP+ +++ +L ++ ++LD +I Sbjct: 132 S-VTEVLTELTFPVNMHWAN-----NSFEYIRPVHTLVVLL-----DDQALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G I+ GHRF ++ S Y DL + V+ D + R+ I++ H + + + Sbjct: 181 GRISRGHRFLGSDT-EILSASSYEDDLRQQFVIADAKERQQMIVDQIHAIEEKENISVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI Sbjct: 240 DEDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQKL--------------------NI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLG---KKIAQLIDADVALVDRAIVLSKADL 422 + +L V FH KIG+ E + R++V+ + A L D + V RA + K DL Sbjct: 339 ADLVEKLKQ--VTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 397 LTGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------- 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + + Sbjct: 457 FDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDY 516 Query: 530 -EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 + ++ F R++ + + + D+ EA+L + + I++ + L + A+ + Sbjct: 517 ANQKEVMAFISARIEKMIGSK-VPKDIREAVLESDTYIVSLILEASQALVQKSKDAQYKV 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + S+ + EK LY I + H Sbjct: 576 SVESLSRAFNLAEK-----VTHSVSVDYSLFENNQEKALYQAILSLEL-------TEDMH 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D L ++ I FFD +V DD +++ NRL+LL + V + Sbjct: 624 DNLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALLNSLVAKARTVAAFNLL 676 >gi|148997465|ref|ZP_01825070.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP11-BS70] gi|307068124|ref|YP_003877090.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae AP200] gi|147756520|gb|EDK63561.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP11-BS70] gi|306409661|gb|ADM85088.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae AP200] Length = 678 Score = 498 bits (1283), Expect = e-138, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKASLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|225857101|ref|YP_002738612.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae P1031] gi|254781867|sp|C1CLH4|SYGB_STRZP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225724579|gb|ACO20431.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae P1031] Length = 678 Score = 498 bits (1283), Expect = e-138, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEYFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|157829149|ref|YP_001495391.1| glycyl-tRNA synthetase subunit beta [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801630|gb|ABV76883.1| glycyl-tRNA synthetase subunit beta [Rickettsia rickettsii str. 'Sheila Smith'] Length = 670 Score = 498 bits (1283), Expect = e-138, Method: Composition-based stats. Identities = 229/702 (32%), Positives = 350/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ L + K EE G Sbjct: 19 IPAFMQKNAEEGYLNIFTKIFEENEI-FAKVQVFAGPRRITLHATHLPKITLPKEEEIKG 77 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 78 PSIEAPEAAINGFCKAHNVSKLELPT--KLISNQLYYFFVKKTEEREIKEILPEIIIEAI 135 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ + + NITYGH Sbjct: 136 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYGH 185 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I LA++ L + ED L+EE Sbjct: 186 RLTDNKKLEVTDFEDYRNKLLENHVILERAKREEIIKTGLLELANSHELIIKEDNRLVEE 245 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 ++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + + Sbjct: 246 VVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFT 305 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F K+D ++K L+ R+ +L Sbjct: 306 NA-ELVIQGNEKVLSARLSDALYFCKQD--------------------IAKTLESRLGQL 344 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHAK+G E++ RI + IA + + A L K+DL +E+VREFP+ Sbjct: 345 E--AVTFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVREFPD 398 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI++H KP+G +NVP+ ++ +LADKLD+L+ Sbjct: 399 LQGIMGYYYAKHEGLNAEIAAAIKDHYKPQGLSDNVPSGNAALL-ALADKLDSLVGLMIA 457 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-------------LILFFH 539 E P+GS DPYALRR LGIIRIILENK+++ + I +I FF Sbjct: 458 GETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFE 517 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y D LI A+L NL+ + L EF G++ L + KR I Sbjct: 518 ERAKFYFK-NDYDIALINAVLDL---NLVDTNFKLDELKEFLIEDAGKQLLNAYKRASNI 573 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 574 I-----GDQKITGLVDVSLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSLLT 628 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ I + V ++ Sbjct: 629 PITSFFDNVLVNDSDPKIAQNRLSLLQNICELFDKVAKFNRL 670 >gi|303255015|ref|ZP_07341092.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS455] gi|303259074|ref|ZP_07345053.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP-BS293] gi|303261754|ref|ZP_07347701.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS292] gi|303264427|ref|ZP_07350347.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS397] gi|303266741|ref|ZP_07352623.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS457] gi|303269166|ref|ZP_07354944.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS458] gi|301802205|emb|CBW34951.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae INV200] gi|302598022|gb|EFL65091.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS455] gi|302637334|gb|EFL67822.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS292] gi|302640017|gb|EFL70473.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP-BS293] gi|302641290|gb|EFL71659.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS458] gi|302643730|gb|EFL73995.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS457] gi|302646239|gb|EFL76466.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS397] Length = 678 Score = 498 bits (1283), Expect = e-138, Method: Composition-based stats. Identities = 196/713 (27%), Positives = 329/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEEEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEIPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMNFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|149019423|ref|ZP_01834785.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP23-BS72] gi|147931293|gb|EDK82272.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP23-BS72] Length = 678 Score = 498 bits (1283), Expect = e-138, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 329/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEEEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEIPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+A+ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFAVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMNFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|300871578|ref|YP_003786451.1| glycyl tRNA synthetase subunit beta [Brachyspira pilosicoli 95/1000] gi|300689279|gb|ADK31950.1| glycyl tRNA synthetase beta subunit [Brachyspira pilosicoli 95/1000] Length = 695 Score = 498 bits (1283), Expect = e-138, Method: Composition-based stats. Identities = 189/738 (25%), Positives = 345/738 (46%), Gaps = 80/738 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+EI EEIPA + A+ I+ LK G+ ++++ Y TP RL + ++ + Sbjct: 1 MKDLLIEILVEEIPADFAYPASMSFKKIMEDTLKNNGISFKSIIAYTTPRRLSVLVEEVE 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGD------- 107 S ++I E GP + G+ KA +GFL+S + I + K+D K Sbjct: 61 EKSKDEIVESRGPLLESAIKDGSLTKAGEGFLKSHNIDNIKNIDEKEDFNKAYIKEVGGK 120 Query: 108 -VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 K + + + ++ + K+ + K MRW F+++RP++++L + Sbjct: 121 KYLFVKKEKKGVDTKKLFEEVLEDIVSKIDFKKKMRWGNKD-----FAFVRPIRNVLALF 175 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++I + I N GHR +P ++ + Y + L E V++ E R Sbjct: 176 -----GNEVIKTTVAGIETNNKVTGHRLLSPEFKEINNPKDYEKTLAEKHVIVSREKRLE 230 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 I+ ++ +G E V K + E ++ LVE + FD K+L +P+E++ + + Sbjct: 231 NIVAQLEKIEKELGFEAVSKKKVSEIVVDLVEEPYLLTAEFDSKFLEVPKEVLTSEMIEH 290 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F ++G L N F++ +N + I+ GN RV+ ARL D ++ D Sbjct: 291 QKYFPLCKKDGSLTNIFVITANQPKTPQ---IIAGNIRVLTARLSDGRFLYQED------ 341 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 + K +D+ RL M ++F ++G+ ++V R+ + + +L+ Sbjct: 342 --------------IRKGMDEMNERLQM--LMFRKELGSVADKVKRLEKNSELLIKLLGY 385 Query: 407 DVAL--VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D + +AI K+DL + +V FPELQG +G +A N N AI E +P Sbjct: 386 DKDKENILKAIKYMKSDLVSNMVYNFPELQGIMGGYFAKSMNLNDDVALAINEQYRPLFA 445 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 +N+P+N +++ DK+D ++ + + + P+GS+DP ALRR LGI+ I++++K + Sbjct: 446 TDNIPSNDTGKAIAILDKMDNIVAGFYVADIPTGSQDPNALRRQALGIVNILIKSKKHVN 505 Query: 525 LSQFIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 L + IED ++ FF R + D D D + +L D+ Sbjct: 506 LKKLIEDSINSMPKDARVNKSNDLLNDIFEFFKSRFEN---DIDFAKDSVAGVLSTGIDD 562 Query: 567 LLTIVDLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 + I+ ++ F + LL KR+ ++ ++ N L EAE Sbjct: 563 MYDAYLKIEAIDAFRKKNEELFSNLLLVFKRVKNMIKSAKEVNL------DESLLKEEAE 616 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY + + + + M+ + Y + LL S+ EP++ FF ++VNVDD ++++NR++L Sbjct: 617 KSLYNIYKEKLNEVNKLMEKREYEKTFALLASLYEPLDKFFKDIMVNVDDEKIKNNRIAL 676 Query: 685 LQYIKNIILIVINVQKIV 702 L + I +++ +V Sbjct: 677 LSSVDKIFKNMLDFSSLV 694 >gi|148990283|ref|ZP_01821494.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP6-BS73] gi|147924422|gb|EDK75512.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP6-BS73] Length = 678 Score = 498 bits (1283), Expect = e-138, Method: Composition-based stats. Identities = 193/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFRGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|224372774|ref|YP_002607146.1| glycyl-tRNA synthetase subunit beta [Nautilia profundicola AmH] gi|223588758|gb|ACM92494.1| glycyl-tRNA synthetase, beta subunit [Nautilia profundicola AmH] Length = 657 Score = 498 bits (1282), Expect = e-138, Method: Composition-based stats. Identities = 193/713 (27%), Positives = 335/713 (46%), Gaps = 77/713 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K ++ + +L++ + Y+TP RL L+ + Sbjct: 5 LLIEIGVEELPAIPLLKELPNIEKKWLDVLEKYDLK-ATFSFYYTPRRLTLWHREFPVKQ 63 Query: 64 PEKIEERLGPRV----GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 +K EE G KA++GF + G+ + + K K + + Sbjct: 64 EDKTEEIWGAPKEIIEKNP-KALEGFAKKCGIS-VDEVTFKAKGNK-EFAYFQKEVKGKE 120 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 +++L ++ + + + K+M+W + +IRP++ ILC+L ++++I+ D Sbjct: 121 AKELLPQMINEWLNSLSFGKTMKWGECEA-----EFIRPVRWILCML-----EDEVIEFD 170 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + NIT HR I++ + Y L++ V+L + R+ IL + +L Sbjct: 171 AYCVKSSNITKPHRIFKDD-IEIGYVGDYFCRLDKHGVILYQDERKAKILREIEKLEKEN 229 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G+++ D+DLL EI+ + E+ +G FD+++L LP E+I ++K +Q+ F ++G L Sbjct: 230 GIKVEIDEDLLAEIVAITEYPTPLLGKFDEEFLVLPPEVIITSMKEHQRYFPVY-KDGKL 288 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 N F++VSN +D I+ GN +V+ ARL DAL FW+ D N ++ LK Sbjct: 289 TNAFVVVSNA-YTDNFDKIIAGNEKVLRARLSDALFFWENDLKNGLSIEGLK-------- 339 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 D+V+ +G+ ++V R + + +A AD + +A+ L+K Sbjct: 340 ----------------DIVYMDGLGSVYDKVKREEKIAEILADKFSADKDKLLKAVNLAK 383 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EF ELQG +G YA AI+E + +NK S +++ Sbjct: 384 ADLLTEMVYEFTELQGVMGYYYAKAAGIEDEIAVAIKEQY------TDEASNKTSALLNI 437 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE-----------NKIDIPLSQF 528 A LDTL+ ++I + P G+KDP+ LRRA II+I E N++ F Sbjct: 438 ARNLDTLMALFSIGKIPKGNKDPFGLRRAANYIIKIANENDIDLDIKDIINELKDNYKDF 497 Query: 529 IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 + +L+ F +RL ++ +I ++L NL I +K +NE +S ++ Sbjct: 498 -DTNSLVDFIFERL---YKFYNVNPSVIRSVLATGESNLREIDKKVKLINEMVNSEGFKE 553 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + KR+ I+ + S+ + E EK L+ + K Sbjct: 554 LSSTFKRVANIVKDFDLN----SINVDESLFEKEEEKALWDEFKKVK-------EIKNLE 602 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + D L S+ I+ FFD V+VNVDD +VR NR SL+ I L + ++++I Sbjct: 603 EKLDFLVSLKPLIDKFFDNVMVNVDDEKVRHNRKSLIASIYKEFLDIADIKEI 655 >gi|34581093|ref|ZP_00142573.1| glycyl-tRNA synthetase beta chain [Rickettsia sibirica 246] gi|28262478|gb|EAA25982.1| glycyl-tRNA synthetase beta chain [Rickettsia sibirica 246] Length = 664 Score = 498 bits (1282), Expect = e-138, Method: Composition-based stats. Identities = 227/702 (32%), Positives = 347/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ L + K EE G Sbjct: 13 IPAFMQKNAEEGYLNIFTKIFEENEI-FAKVQVFAGPRRITLHATHLPKITLPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 72 PSIEAPEAAINGFCKAHNVSKLELPT--KLISNQLYYFFVKKTEEREIKEILPEIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ + + NITYGH Sbjct: 130 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I LA++ L + ED L+EE Sbjct: 180 RLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELANSHELIIKEDNRLVEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 ++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + + Sbjct: 240 VVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFT 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F K+D ++K L+ R+ +L Sbjct: 300 NA-ELVIQGNEKVLSARLSDALYFCKQD--------------------IAKTLESRLGQL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHAK+G E++ RI + IA + + A L K+DL +E+V EFP+ Sbjct: 339 E--AVTFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +N+P+ ++ +LADKLD+L+ Sbjct: 393 LQGIMGYYYAKHEGLNAEIATAIRDHYKPQGLSDNLPSGNAALL-ALADKLDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-------------LILFFH 539 E P+GS DPYALRR LGIIRIILENK+++ I +I FF Sbjct: 452 GETPTGSGDPYALRRQALGIIRIILENKLELNFDDLINFSINLYKDSSDENKNLIISFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y D LI A+L NL+ + L EF G++ L + KR I Sbjct: 512 ERAKFYFK-NDYDIVLINAVLDL---NLVDTNFKLDALKEFLIEDAGKQLLNAYKRASNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 568 I-----GDQKITGLVDASLFSTQPEKELFEVIQKISPRIIDSIADKDYKKALNLLSSLLT 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ I + V ++ Sbjct: 623 PITSFFDNVLVNDSDPKIAQNRLSLLQNICELFDKVTKFNRL 664 >gi|161936376|ref|YP_140919.2| glycyl-tRNA synthetase subunit beta [Streptococcus thermophilus CNRZ1066] Length = 678 Score = 498 bits (1282), Expect = e-138, Method: Composition-based stats. Identities = 200/713 (28%), Positives = 336/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTIDD---IEFREVKGEEYVYVTKHEAGKSAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P SM W+ ++F +IRP+ +++ +L ++ ++LD I Sbjct: 132 G-IPEVLASLTFPVSMHWAN-----NSFEYIRPVHTLIVLL-----GDEALELDFLGIKS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLGHE-VEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +I F R+ + D+ EA+L N + +++ + L+E + + Sbjct: 517 DNQAEVIRFIKARVDKMMGS--TPKDIKEAVLSGSNFVVADMLEAAEALSEAAKTDGYKA 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + + EK L S Sbjct: 575 AVESLSRAFNLAEKA-----DTSVAVDASLFENDQEKALAQAAESLELTGSASDK----- 624 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + I+ FFD +V DD V++NRL+LL + V ++ Sbjct: 625 --LAQLFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSALVAKAKTVAAFNQL 675 >gi|293603528|ref|ZP_06685949.1| glycyl-tRNA synthetase beta subunit [Achromobacter piechaudii ATCC 43553] gi|292817964|gb|EFF77024.1| glycyl-tRNA synthetase beta subunit [Achromobacter piechaudii ATCC 43553] Length = 712 Score = 498 bits (1282), Expect = e-138, Method: Composition-based stats. Identities = 185/728 (25%), Positives = 323/728 (44%), Gaps = 75/728 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + K + + + L+ G++ + + Y TP RL ++L + +P++ E+ Sbjct: 18 PPKALQKLGQAFAEGVRATLERHGLLAEGCAVTAYSTPRRLAVHLSAVLAQAPDQPYAEK 77 Query: 71 LGPRV------GAGKKAIDGFLRSTGLQTISDCQI-KKDPKKGDVYLAVLRKPKRLIEDV 123 L P G A+ L + GL+ I + ++ K D +A + Sbjct: 78 LMPAKIGLTEDGKATPALQKKLAAKGLENIDLATLDRESDGKQDYLIARGTAAGSSLATG 137 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + A+ +P PK MR+ ++ ++RP ++ + A+ ++ + + Sbjct: 138 LQEGIDNALNGLPIPKVMRYQLADG-VTTVKFVRPAHGLVALFGAD-----VVPVSALGM 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G T GHRF P+ D Y L E V+ E RR+ I A + Sbjct: 192 QAGRDTLGHRFMCEGPVSFADADSYAATLAEKGRVVASFEGRRDDIQRQLLEHAGRLSAT 251 Query: 243 LVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGV 298 L +D + LL+E+ LVE V++G F++++L +P+E + LT++ NQK F G Sbjct: 252 LGDDPEVAALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTMRLNQKYFPLFDPATGR 311 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L + F++VSN+ D IV+GN RVV RL DA F++ D+ Sbjct: 312 LTHRFLIVSNMHT-DNPVNIVEGNQRVVRPRLADAQFFFETDR----------------- 353 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 PL R+ +L +V+H K+GTQ ERV R+R + + +A+ + DV DRA +L+ Sbjct: 354 ---KTPLAARVEQLG--SIVYHNKLGTQLERVERVRAIARGVAEQLGGDVTAADRAAMLA 408 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA E S +A+ + R + T+ Sbjct: 409 KADLGSNMVGEFPELQGIMGAYYAAGDGEPASVVEALRTQYRNRYDAPVTEDTLTAATLF 468 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGII---RIILENKI-------DIPLSQF 528 +A++++TL+ WAI P+G +DP+ LRRA LG+I + + L Sbjct: 469 IAERVETLVGIWAIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKVSQDGPLSLDGL 528 Query: 529 ---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + F ++R + L + R + +EA++ L + + Sbjct: 529 LTLAAGTFPAGKIPADTLAEVRTFIYERYRNQLINDFDR-NAVEAVIALTP-PLHQVAER 586 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ F + + KRI +L KK ++ L+ AE+ L A ++ Sbjct: 587 VRAAAAFAQLPEAASLAAANKRIGNLL----KKTEGEIGAVNDAALVEPAERALAATVAA 642 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + + L EP++ FF V+V +D VR NRL+LL + ++ Sbjct: 643 LRPQAEAQLAAGDFAGSLSTLAQAREPVDAFFVDVMVMAEDPAVRANRLALLSQLHGLMN 702 Query: 694 IVINVQKI 701 V ++ ++ Sbjct: 703 QVADISRL 710 >gi|19746599|ref|NP_607735.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS8232] gi|25009327|sp|Q8NZW7|SYGB_STRP8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|19748816|gb|AAL98234.1| putative glycyl-tRNA synthetase (beta subunit) [Streptococcus pyogenes MGAS8232] Length = 679 Score = 498 bits (1282), Expect = e-138, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 340/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NDQAIENVIKGNEKVLVARLEDGEFFWREDQKLQ--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV---DRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A+ + V DRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EA+L + ++ + L + + + Sbjct: 517 ANKADVMNFIRARVDKMM-GKAAPKDIREAVLESSTFVVPEMLAAAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAA------- 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + + ++ I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 624 QQLEQVFALSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|257452608|ref|ZP_05617907.1| glycyl-tRNA synthetase beta chain [Fusobacterium sp. 3_1_5R] gi|317059148|ref|ZP_07923633.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 3_1_5R] gi|313684824|gb|EFS21659.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 3_1_5R] Length = 687 Score = 498 bits (1282), Expect = e-138, Method: Composition-based stats. Identities = 180/725 (24%), Positives = 336/725 (46%), Gaps = 74/725 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EE PAR A +L + K E + + ++ Y TP RL L + ++ Sbjct: 3 LLFEIGMEENPARFLEPALAELKKNFMNKCKAERIAHGEVKMYGTPRRLILCAEEVAEQQ 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E +GP G +A GF +S G+ + I+ D KG+ A Sbjct: 63 EDLNELNIGPAKSIAFLNGEITRAGIGFAKSQGIDPVDLEIIQTD--KGEYIAARKSLQG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + + +L ++ + ++ +PKSM+WS + RP++ L + A ++++ Sbjct: 121 QATKTLLPELLKSLVLELSFPKSMKWSDLK-----IRFARPIEWFLAM-----ADSEVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ + N + GHRF V S++ Y + E V++D + R+ I D + Sbjct: 171 FEIEGMKSSNHSKGHRFFG-KEFTVNSVEDYFVKIRENNVIIDIQERKKMIREDILSKIA 229 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 ++V ++ LL E+ LVE+ +G+F+ +L +P+E++ ++++ +Q+ F + G Sbjct: 230 EDE-QVVIEEGLLSEVTNLVEYPYPIVGTFNSDFLEVPQEVLIISMEVHQRYFPILDKNG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L F+++ N + + GN +V++ARL DA F+K D N Sbjct: 289 KLLPKFVVIRNGI--EDSDNVRIGNEKVLSARLADARFFYKEDLRNH------------- 333 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--ALVDRAI 415 L+ + +L VVF +GT ++++R + + + + + + V R Sbjct: 334 -------LENNVEKLK--HVVFQKDLGTIYQKITRTQEICEILLAKLHLEEKRETVLRTA 384 Query: 416 VLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L+KADL + ++ +EF +LQG +G +YA+ E I EH PR + +P Sbjct: 385 YLAKADLVSNMIGEKEFTKLQGFMGADYALKFGEKEEVSKGIREHYYPRFQGDELPQVVE 444 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 I V +AD+LDTL+ + + PSGSKDP+ALRRA LGI+ IIL +K+D+ L + + Sbjct: 445 GILVGIADRLDTLVGCFGVGVIPSGSKDPFALRRAALGIVNIILNSKLDLSLRELVNASL 504 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++ ++ FF RL ++ + D++ A+L ++++ + + Sbjct: 505 DTLAKDGVLKRDRAEVEKEVMEFFKQRLINVFSEK-MDRDIVAAVLEVQSEDAMDAFTRM 563 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L F + + L AKR+ I + S E++ E EK LY Sbjct: 564 QALKAFLTEEGAKDLLDLAKRVGNISKEAK------SREVNVTLFQQEEEKELYHYTEKT 617 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I+ + K Y + + E + +F+ V V ++ EV++NR+S L + ++ Sbjct: 618 KMEIESLVSDKNYAGYLAAVLASKEIVTKYFNAVKVMDENVEVQNNRISQLGLLSSLYQK 677 Query: 695 VINVQ 699 + ++ Sbjct: 678 LADLS 682 >gi|94991012|ref|YP_599112.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS10270] gi|229558579|sp|Q1JFJ1|SYGB_STRPD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94544520|gb|ABF34568.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS10270] Length = 679 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 342/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V++D + R+ I+ L G+++ Sbjct: 181 GCVSRGHRFLGTET-TITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D++LL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DENLLNEVLNLVEFPTAFMGSFEAKYLDIPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NDQAIENVIKGNEKVLVARLEDGEFFWREDQKLQ--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV---DRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A+ + V DRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EAIL + ++ + + L + + + Sbjct: 517 TNKADVMNFIRARVDKMM-GKAAPKDIREAILASSTFVVPEMLAVAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAA------- 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + + ++ I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 624 QQLEQVFALSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|168483914|ref|ZP_02708866.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1873-00] gi|172042754|gb|EDT50800.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1873-00] gi|332200037|gb|EGJ14110.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA47368] Length = 678 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 196/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEEEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +QS Y DL + V+ DP R I++ + G+ + Sbjct: 181 GRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEVKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEIPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMNFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|22536454|ref|NP_687305.1| glycyl-tRNA synthetase subunit beta [Streptococcus agalactiae 2603V/R] gi|81845501|sp|Q8E1T3|SYGB_STRA5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|22533283|gb|AAM99177.1|AE014203_24 glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 2603V/R] Length = 679 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 202/713 (28%), Positives = 342/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQIFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + DVL Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLSVDD---IEFREVKGEEYVYVTKHETGKSAIDVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + V + ++ +P +M W+ ++F +IRP+ +++ +L ++ ++LD +I Sbjct: 132 S-VTEVLTELTFPVNMHWAN-----NSFEYIRPVHTLVVLL-----DDQALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G I+ GHRF ++ S Y DL + V+ D + R+ I+N H + + + Sbjct: 181 GRISRGHRFLGSDT-EISSASSYEDDLRQQFVIADAKERQQMIVNQIHAIEEKKNISVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI Sbjct: 240 DEDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQKL--------------------NI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLG---KKIAQLIDADVALVDRAIVLSKADL 422 + +L V FH KIG+ E + R++V+ + A L D + V RA + K DL Sbjct: 339 ADLVEKLKQ--VTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 397 LTGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------- 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + + Sbjct: 457 FDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDY 516 Query: 530 -EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 + ++ F R++ + + + D+ EA+L + + I++ + L + A+ + Sbjct: 517 ANQKEVMAFISARIEKMIGSK-VPKDIREAVLESDTYIVSLILEASQALVQKSKDAQYKV 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + S+ + EK LY I + H Sbjct: 576 SVESLSRAFNLAEK-----VTHSVLVDSSLFENNQEKALYQAILSLEL-------TEDMH 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D L ++ I FFD +V DD +++ NRL++L + V + Sbjct: 624 DNLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLAILNSLVAKARTVAAFNLL 676 >gi|163783650|ref|ZP_02178638.1| phosphoenolpyruvate synthase [Hydrogenivirga sp. 128-5-R1-1] gi|159881055|gb|EDP74571.1| phosphoenolpyruvate synthase [Hydrogenivirga sp. 128-5-R1-1] Length = 666 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 201/720 (27%), Positives = 341/720 (47%), Gaps = 76/720 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+EI +EE+P+ + L L +L +++ Y TP RL Y+K Sbjct: 1 MSDLLIEIGTEELPSSVIEPTLAFLKGRLSEVLGR-----EDIETYGTPRRLAFYVKEFV 55 Query: 61 PHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 ++ E GP G ++++GFL+ G + K KG+ + Sbjct: 56 DERVKREETVFGPPWHVAFDEEGKPTRSLEGFLKRYGARPGD--VFKGSKGKGEYVALKV 113 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ + LK + VP PK MRW + ++ RP++ IL + + Sbjct: 114 VHEEKSRLEALKESFEDMLLSVPLPKRMRW----TSSKRITFSRPVRWILAL-----HGD 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++DL E+ T GHRF + I++ + Y+ +E+A V+ E RR +++ Sbjct: 165 RVVDLRFGELQSDRRTKGHRFLSGDWIELSKAEDYLSVMEKASVIPSIEERRGLVVDAVE 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A + + L++E+ LVE+ V +GSF++K+L LP EL+ +T+ + + F Sbjct: 225 EEARKLSAVPRYPEGLVDEVTNLVEYPFVVVGSFEEKFLELP-ELVIITVSAHHQRFFCL 283 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +R+G L N FI VSN I +G +V+ ARLEDAL F++ D Sbjct: 284 SRDGKLINKFIGVSNNLPKT--DLIRRGYEKVLRARLEDALFFYRED------------- 328 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 L + L++ + +L V+ H KIGT ++V R++ + +++ + D Sbjct: 329 -------LKRRLEELVPKLS--GVLIHPKIGTVLDKVERLKSISQRLCDELSCDEETRRK 379 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V+RA+ LSKADL TE+V+E ELQG +G YA+ Q E AI E KP+G ++ P Sbjct: 380 VERAVYLSKADLLTEMVKELDELQGYMGYIYALKQGEEEDVAKAIYEQYKPKGLEDDTPE 439 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +SL+DK+D L++F++ E P GS DP+ LRRA+ G+ RI+ E DI +S+ E Sbjct: 440 TLVGAVLSLSDKIDDLVSFFSAGEIPKGSSDPFGLRRASFGVFRILEERNWDIDISRLFE 499 Query: 531 DQN-------LILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFS 582 + L F RL+ YL +DL+ A+L+ E ++ +K L+ + Sbjct: 500 LYDRVDNVEELEKFLAQRLESYLERYG--YDLVRAVLKVESPFRPYRVIKKVKELSAVRN 557 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 +R+ +IL E + + E+ + L E L+ + + Sbjct: 558 DKAFTDIYEGYRRVVKILPKEWENS-----EVKEELLREPQEINLWREVREL-------- 604 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + + + L + + I+ FD VL+ D EV+ NRLSLL +K + + ++V Sbjct: 605 ESREFP--LSELAKLRKAIDDLFDNVLIMDKDEEVKRNRLSLLNRVKKLFNRYADFSEVV 662 >gi|15901324|ref|NP_345928.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae TIGR4] gi|111658115|ref|ZP_01408814.1| hypothetical protein SpneT_02000723 [Streptococcus pneumoniae TIGR4] gi|221232199|ref|YP_002511352.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae ATCC 700669] gi|225854916|ref|YP_002736428.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae JJA] gi|25009336|sp|Q97PW6|SYGB_STRPN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781864|sp|B8ZL20|SYGB_STRPJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781866|sp|C1CF57|SYGB_STRZJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|14972964|gb|AAK75568.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae TIGR4] gi|220674660|emb|CAR69229.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae ATCC 700669] gi|225723313|gb|ACO19166.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae JJA] Length = 678 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 194/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGQETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKASLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLILSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|229587216|ref|YP_002845717.1| glycyl-tRNA synthetase subunit beta [Rickettsia africae ESF-5] gi|259511930|sp|C3PLY4|SYGB_RICAE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|228022266|gb|ACP53974.1| Glycyl-tRNA synthetase beta chain [Rickettsia africae ESF-5] Length = 664 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 225/702 (32%), Positives = 347/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 +PA MQ A E I + +E + + ++ + P R+ L+ L + K EE G Sbjct: 13 MPAFMQKNAEEGYLNIFTKIFEENEI-FAKVQVFVGPRRITLHATHLPKITLPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 72 PSIEAPEAAINGFCKAHNVSKLELPT--KLISNQLYYFFVKKTEEREIKEILPEIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ + + NITYGH Sbjct: 130 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I LA++ L + ED L+EE Sbjct: 180 RLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELANSHELIIKEDNRLVEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 ++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + + Sbjct: 240 VVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFT 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F K+D ++K L+ R+ +L Sbjct: 300 NA-ELVIQGNEKVLSARLSDALYFCKQD--------------------IAKTLESRLGQL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + FHAK+G E++ RI + IA + + A L K+DL +E+V EFP+ Sbjct: 339 EAA--TFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +N+P+ ++ +LADKLD+L+ Sbjct: 393 LQGIMGYYYAKHEGLNAEIAAAIRDHYKPQGLSDNLPSGNAALL-ALADKLDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-------------LILFFH 539 E P+GS DPYALRR LGIIRIILENK+++ + I +I FF Sbjct: 452 GETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFK 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y D LI A+L NL+ + L EF G++ L + KR I Sbjct: 512 ERAKFYFK-NDYDIALINAVLDL---NLVDTNFKLDALKEFLIEDAGKQLLNAYKRASNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 568 I-----GDQKITGLVDASLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSLLT 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ I + V ++ Sbjct: 623 PITSFFDNVLVNDSDPKIAQNRLSLLQNICELFDKVAKFNRL 664 >gi|313890643|ref|ZP_07824270.1| glycine--tRNA ligase, beta subunit [Streptococcus pseudoporcinus SPIN 20026] gi|313120954|gb|EFR44066.1| glycine--tRNA ligase, beta subunit [Streptococcus pseudoporcinus SPIN 20026] Length = 679 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 204/713 (28%), Positives = 343/713 (48%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L+ + Y+ ++ + TP RL + + GL+ + +E+ GP Sbjct: 15 PAYVVTASEKQLGQKMATFLEANRLSYERIQTFSTPRRLAVRVHGLTDQQEDLVEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T I+ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDAQGNFTKAAQGFVRGKGLTTDD---IEFRKIKGEEYVYVTKNEKGKAAQEVLM 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P SM W++ ++F +IRP+ ++ +L + ++++ +I Sbjct: 132 G-IPDLLASLTFPVSMHWAS-----NSFEYIRPVHTLTVLL-----DDHLLEMPFLDISS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 + GHRF I +Q+ Y DL V++DP R+ ILN L +++ Sbjct: 181 ARYSRGHRFLG-KEIAIQNALSYEADLRTQSVIVDPLERQQMILNQIKELEKEHHIQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFLGTFDTKYLSVPEEVLVTSMKNHQRYFVVRDQSGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-QYIENVIKGNEKVLIARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDRAIVLSKADL 422 + +A+L+ DV FH KIG+ + + R V+ +A+ + V+RA + K DL Sbjct: 339 EDLVAKLE--DVTFHEKIGSLAQHMERTGVIANYLAEKANLSAEESKAVERASQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ S AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGVMGEKYALLAGEDPSVATAIREHYLPSSADGTLPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 LDTL++F+++ PSGS DPYALRRAT GI+RI DIP+ Q Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRIFEAFGWDIPMDQLIANCYQLSFADFSY 516 Query: 529 IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 + ++ F R++ + I D+ EA+L + + ++ + L ++ + Sbjct: 517 THQEEVMTFIAARIEKMMGS-SIPKDIREAVLASTHYQVPEMLATAQALVAASKTSHYKV 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + R+F + A + + I+P + EK LY I D + Sbjct: 576 AVENLSRVFNLAAK-----VDTEVTINPNIFENQEEKELYQAIVDLQLEGHAAHK----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ + I FFD +V +DRE+R+NRL+LL + V + Sbjct: 626 --LEQLFALTDKIAAFFDHTMVMAEDREIRNNRLALLTELVEKAETVAQFNLL 676 >gi|116627393|ref|YP_820012.1| glycyl-tRNA synthetase subunit beta [Streptococcus thermophilus LMD-9] gi|122268006|sp|Q03LV6|SYGB_STRTD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116100670|gb|ABJ65816.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus thermophilus LMD-9] gi|312277908|gb|ADQ62565.1| Glycyl-tRNA synthetase beta subunit [Streptococcus thermophilus ND03] Length = 678 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 201/713 (28%), Positives = 337/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKSAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P SM W+ ++F +IRP+ +++ +L ++ ++LD I Sbjct: 132 G-IPEVLASLTFPVSMHWAN-----NSFEYIRPVHTLIVLL-----GDEALELDFLGIKS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLGHE-VEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +I F R+ + D+ EA+L N + +++ + L+E + + Sbjct: 517 DNQAEVIRFIKARVDKMMGS--TPKDIKEAVLSGSNFVVADMLEAAEALSEAAKTDGYKA 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + + EK L V S Sbjct: 575 AVESLSRAFNLAEKA-----DTSVAVDASLFENDQEKALAQVAESLELTGSASDK----- 624 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + I+ FFD +V DD V++NRL+LL + V ++ Sbjct: 625 --LAQLFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSALVAKAKTVAAFNQL 675 >gi|257466465|ref|ZP_05630776.1| glycyl-tRNA synthetase beta chain [Fusobacterium gonidiaformans ATCC 25563] gi|315917622|ref|ZP_07913862.1| glycyl-tRNA synthetase subunit beta [Fusobacterium gonidiaformans ATCC 25563] gi|313691497|gb|EFS28332.1| glycyl-tRNA synthetase subunit beta [Fusobacterium gonidiaformans ATCC 25563] Length = 687 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 179/725 (24%), Positives = 335/725 (46%), Gaps = 74/725 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EE PAR A +L + K E + + ++ Y TP RL L + ++ Sbjct: 3 LLFEIGMEENPARFLEPALAELKKNFMNKCKAERIAHGEVKMYGTPRRLILCAEEVAEQQ 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E +GP G +A GF +S G+ + I+ D KG+ A Sbjct: 63 EDLNELNIGPTKSIAFLNGEITRAGIGFAKSQGIDPVDLEIIQTD--KGEYIAARKSLQG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + + +L ++ + ++ +PKSM+WS + RP++ L + A ++++ Sbjct: 121 QATKTLLPELLKSLVLELSFPKSMKWSDLK-----IRFARPIEWFLAM-----ADSEVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ + N + GHRF V S++ Y + E V++D + R+ I D + Sbjct: 171 FEIEGMKSSNHSKGHRFFG-KEFTVNSVEDYFVKIRENNVIIDIQERKKMIREDILSKIA 229 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 ++V ++ LL E+ LVE+ +G+F+ +L +P+E++ ++++ +Q+ F + G Sbjct: 230 EDE-QVVIEEGLLSEVTNLVEYPYPIVGTFNSDFLEVPQEVLIISMEVHQRYFPILDKNG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L F+++ N + + GN +V++ARL DA F+K D N Sbjct: 289 KLLPKFVVIRNGI--EDSDNVRIGNEKVLSARLADARFFYKEDLRNH------------- 333 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--ALVDRAI 415 L+ + +L VVF +GT +++ R + + + + + + V R Sbjct: 334 -------LENNVEKLK--HVVFQKDLGTIYQKIKRTQEICEILLAKLHLEEKRETVLRTA 384 Query: 416 VLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L+KADL + ++ +EF +LQG +G +YA+ E I EH PR + +P Sbjct: 385 YLAKADLVSNMIGEKEFTKLQGFMGADYALKFGEKEEVSKGIREHYYPRFQGDELPQVVE 444 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 I V +AD+LDTL+ + + PSGSKDP+ALRRA LGI+ IIL +K+D+ L + + Sbjct: 445 GILVGIADRLDTLVGCFGVGVIPSGSKDPFALRRAALGIVNIILNSKLDLSLRELVNASL 504 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++ ++ FF RL ++ + D++ A+L ++++ + + Sbjct: 505 DTLAKDGVLKRDRAEVEKEVMEFFKQRLINVFSEK-MDRDIVAAVLEVQSEDAMDAFTRM 563 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L F + + L AKR+ I + S E++ E EK LY Sbjct: 564 QALKAFLTQEGAKDLLDLAKRVGNISKEAK------SREVNVTLFQQEEEKELYHYTEKT 617 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I+ + K Y + + E + +F+ V V ++ E+++NR+S L + ++ Sbjct: 618 KMEIESLVSDKNYAGYLAAVLASKEIVTKYFNAVKVMDENVEIQNNRISQLGLLSSLYQK 677 Query: 695 VINVQ 699 + ++ Sbjct: 678 LADLS 682 >gi|227485433|ref|ZP_03915749.1| glycine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227236563|gb|EEI86578.1| glycine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 687 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 203/731 (27%), Positives = 342/731 (46%), Gaps = 74/731 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIP+ L LL E + Y+++ TP R + LK ++ Sbjct: 1 MHNYLLEIGVEEIPSDYVKNTKIQLKEKFEKLLSENKLSYEDVEIESTPRRFMVLLKNVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +++ GP +A+ GFL+ + I K+ K D Sbjct: 61 ETAQQEVISVRGPSAKIAYDEDNNPSRALLGFLKGQKAELSD--VIIKEQKGEDYVFVEK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ + +E++LK V ++ + +P+SMRW + W RP++ + +L + Sbjct: 119 KEKSKSLEEILKENVYEIVKSISFPRSMRWG-----GKSIRWARPIRWFVSLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K++D D + I GNIT GHR I ++++ Y L+E V+L + RR+ IL + Sbjct: 169 KVLDFDAEGIEVGNITKGHRTLGSDKIVIENISEYEAKLKENYVILRGKDRRDIILKGLN 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++S VG E ++D+DLL+E++ +VE+ V +G D YL LP E+I +K +Q+ F Sbjct: 229 SVSSQVGGEYMKDEDLLDEVVNIVEYPTVLVGEIDHSYLELPREVITTPMKDHQRYFPIL 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + L F LV N +++GN +V+ ARLEDA F+ D N Sbjct: 289 DDKKKLLPYFCLVRNGD-DYESQNVIEGNKKVLVARLEDAKFFYDLDAAN---------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 L+ + LD ++VF +G G++ R+ L + + D Sbjct: 338 ----------TLESYVKDLD--NLVFFEGLGNMGQKTKRLVELATSYQKELSLGDDIAED 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL T +V EF ELQG +G YA+ EN AI+E P+ P Sbjct: 386 AKRAAYLSKADLVTRMVVEFTELQGTMGAIYALNSGENQRVATAIKEQYLPKNQNSETPK 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + I +++ADK+D+++ +AI +GS+DP+ LRRA LGII IILEN ID+ + + I Sbjct: 446 SVVGILLAIADKMDSIVGLYAIENYVTGSRDPFGLRRAALGIINIILENGIDVDIKKLIA 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F DRLK L D R+D++ +++ N+L + Sbjct: 506 EALLVYTEINALAFDYDKTMDETLTFIKDRLKNKLLDDGYRYDIVNSVINTNFTNILKMS 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + +K +++F L RI + E EI L + E++ Y I Sbjct: 566 EKVKAVSDFIGEND--DSLSYLIRINNLTKESE------DREIREDLLETDLERKFYEEI 617 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + Y + + + + + D ++NVD+ EV++NRL++L +K Sbjct: 618 TKLENF--GLVSSADYKKELENIQATSLVGNDYLDNTMINVDNEEVKNNRLAMLNLLKRR 675 Query: 692 ILIVINVQKIV 702 + + ++ +IV Sbjct: 676 MAKIFDISEIV 686 >gi|79436767|ref|NP_190394.3| EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1); glycine-tRNA ligase [Arabidopsis thaliana] gi|75154114|sp|Q8L785|SYGM2_ARATH RecName: Full=Glycyl-tRNA synthetase 2, chloroplastic/mitochondrial; AltName: Full=Glycine--tRNA ligase 2; Short=GlyRS 2; Flags: Precursor gi|22531150|gb|AAM97079.1| glycine--tRNA ligase precursor, chloroplast (edd1) [Arabidopsis thaliana] gi|45773748|gb|AAS76678.1| At3g48110 [Arabidopsis thaliana] gi|332644848|gb|AEE78369.1| glycyl-tRNA synthetase 2 [Arabidopsis thaliana] Length = 1067 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 176/720 (24%), Positives = 336/720 (46%), Gaps = 67/720 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F++EI +EE+P + A+E L ++++ LL+ + + + ++ + TP RL + + +S Sbjct: 386 FIIEIGTEEMPPQDVINASEQLRVLVLELLENQRLRHGAVKAFGTPRRLVVLVDAMSSKQ 445 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E GP G KA +GF R G+ +K K + A + +P Sbjct: 446 LEEEVEVRGPPASKAFDDEGNPTKAAEGFSRRYGVPLEK--LYRKVSGKTEYVHARVTEP 503 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 RL +VL +P + K+ +PKSMRW+ S+ + RP++ ++ + + ++ Sbjct: 504 ARLALEVLSEDLPGILAKISFPKSMRWN------SSVMFSRPIRWVMAL-----HGDLVV 552 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GN++ G R A + VQ+ + Y + + + ++ E R+ IL ++ LA Sbjct: 553 PFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEERKKIILEKSNALA 612 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +V LV ++LL E+ LVE +G F + +L LPEEL+ + ++ +QK F Sbjct: 613 KSVSGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVMQKHQKYFSIIDES 672 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+N ++ + +GN V+ AR EDA F++ D Sbjct: 673 GQLLPYFIAVANGAINE--DVVKKGNEAVLRARYEDAKFFYEVDTR-------------- 716 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDR 413 K + +L ++FH K+GT ++++R++ + K+ + D L V+ Sbjct: 717 ------KRFSEFRDQLQ--GILFHEKLGTMLDKMNRLKKMVSKLCLALKIDEDLLPVVED 768 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+ +DL T +V EF L G + + YA+ + +A+ E PR + +P Sbjct: 769 AASLAMSDLATAVVTEFTALSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPKTDA 828 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------- 526 + +++ D+LD+L+ +A +PS + DP+ LRR + G+++I++E ++ Sbjct: 829 GMVLAIGDRLDSLVGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKRVLELAA 888 Query: 527 -------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + +++ F RL+ L D + +++ ++L +N + Sbjct: 889 SVQPTKVEANTVEDVYQFVTRRLEQLLVDNGVSPEVVRSVLAERGNNPCLAARTAYKTEK 948 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 K + + R +I+ K+ + +E+ E+ L++ + I Sbjct: 949 LSKGEMFPKIVEAYSRPTRIVR---GKDVGVGVEVDENAFETPQERTLWSTYTSIKDRIH 1005 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + +I + EP+E FF+ V V V++ VR NRL+LL I N+ VI++ Sbjct: 1006 TGIEIEDFTEISM---QLVEPLEDFFNNVFVMVEEERVRKNRLALLNNIANLPKGVIDLS 1062 >gi|322387698|ref|ZP_08061307.1| glycyl-tRNA synthetase beta subunit [Streptococcus infantis ATCC 700779] gi|321141565|gb|EFX37061.1| glycyl-tRNA synthetase beta subunit [Streptococcus infantis ATCC 700779] Length = 703 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 201/713 (28%), Positives = 338/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y+ ++ + TP RL + + GL+ + E+ GP Sbjct: 40 PAYVVTPSEKQLGEKMAAFLDDNRLSYEGIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 99 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + E+VL Sbjct: 100 SKKIALDAEGNFSKAAQGFVRGKGLTVDD---IEFREIKGEEYVYVTKHEAGKPAEEVLN 156 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P SMRW+ + F +IRP+ ++ +L ++ ++LD +I Sbjct: 157 G-IPEVLASLSFPVSMRWAN-----NTFEYIRPVHTLTVLL-----DDEALELDFLDIHS 205 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF ++++ D Y DL + V+ D R N I + + G+++ Sbjct: 206 GRVSRGHRFLGHE-VEIRHADSYEEDLRKVYVIADSIERENMIREQIKEIEAEHGVQVQI 264 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+ LL E++ LVE+ FMG+FD KYL +PEE++ +++T+Q+ FV R EG L FI Sbjct: 265 DEGLLNEVLNLVEYPTAFMGNFDPKYLEVPEEVLVTSMETHQRYFVVRDLEGNLKPNFIS 324 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 325 VRNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQKL--------------------KI 363 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDRAIVLSKADL 422 + +A+L V FH KIG+ E + R + +A+ + + RA + K DL Sbjct: 364 EDLVAKLS--HVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDESIDLARAAAIYKFDL 421 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L EN + AI EH P +P +K+ ++LADK Sbjct: 422 LTGMVSEFDELQGIMGEKYALLAGENAAVAQAIREHYLPDSADGALPESKVGAILALADK 481 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ + +IP+ + I Sbjct: 482 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEDFGWNIPMDELIASLYALSFDSLTY 541 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 + ++ F R+ + D+ EA+L N + +++ + L+E + + Sbjct: 542 DNQEEVLNFIKARVDKMMGS--TAKDIKEAVLASSNFVVSDMIEAAEALSEAAKTEDYKS 599 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E S+++ E EK L + S Sbjct: 600 SVESLSRAFTLAEKAEG-----SVKVDTSLFENEQEKELAQAVESLELKGSASDK----- 649 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + I+ FFD +V +D +V++NRL++L + N V + Sbjct: 650 --LTQLFVLSPVIDAFFDNTMVMAEDIDVKNNRLAILAELVNKAKTVAAFNLL 700 >gi|116074692|ref|ZP_01471953.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. RS9916] gi|116067914|gb|EAU73667.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. RS9916] Length = 719 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 188/751 (25%), Positives = 311/751 (41%), Gaps = 87/751 (11%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLEI +EE+PA A L + L + + + ++R TP RL + +K L+ Sbjct: 3 STFLLEIGTEELPADFARLALPQLQERVQRDLADLRLAHGDVRVSSTPRRLAVQVKALAE 62 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EER GP V G A GF + G+ + + KGD A ++ Sbjct: 63 GQEDLCEERKGPPVAQAFKDGQPGPAAIGFAKRCGVDPAALE--VRSTPKGDCVFATVQV 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L+ +P I + + MRW + RP++ ++ +L E Sbjct: 121 KGQPALSLLQDCIPAWIDALQGRRFMRWGNGDQ-----RFSRPVRWLVALLGTEIV-PVT 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHR H P ++V S D Y L V D + R I + Sbjct: 175 LPASEPVVHSGRCSRGHRLH-PGGVEVASADDYDTALAAVGVHADRQQRAALIQSSLQER 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT--- 292 AS+ L L EE++ LVE ++ G +YL LP E+I ++++Q+ Sbjct: 234 ASSFDGALDCPSGLFEELVDLVEDPRIIQGEIADRYLDLPPEVIVTVMQSHQRYVPLTRS 293 Query: 293 --------RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 VL F+LV N AS A I +GN RV++ARL DA F D+ Sbjct: 294 GVQPDPLRLASRDVLRPEFLLVGNGLAS-ADAQIRRGNERVLSARLADAEFFLNVDR--- 349 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 +P R L V F + +G+ +R RI +L + + Sbjct: 350 -----------------KQPSADRREALSR--VTFASGLGSLLDRTERIELLAASLVTAL 390 Query: 405 DA---DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 RA K DL +++V EFPELQG +G +Y + + E A+ EH P Sbjct: 391 QLPAATADAAKRAAHFCKNDLVSQMVGEFPELQGLMGGKYLLEEGETREVAQAVVEHYYP 450 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 RG +++P + V+LA++L+ L++ +A E+P+GS DPYALRRA GI++I+ + Sbjct: 451 RGAGDHLPQSDAGAVVALAERLELLLSIYAKGERPTGSSDPYALRRAGNGILQILWDRGW 510 Query: 522 DIPLSQFIEDQ--------------------NLILFFHDRLKLYLHDRDIRHDLIEAILR 561 + L + +L+L R++ L D DL++A+ Sbjct: 511 RLDLFALLRQFAEVWQQQFPDFKVEAHSLAADLVLLLRQRIQSQLEDDGYEADLVQAVAG 570 Query: 562 PEND------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR--EISLE 613 + L ++D I+ L + +R ++ + + + Sbjct: 571 ETLSDQRLLADPLDVLDRIRLLGSLREGQRLGALQAVVQRAARLAEKGDLEATVLQADAV 630 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLV 670 + P +E ++A + + Y Q+ D L +E FF D V+V Sbjct: 631 VDPGKFASPSETAMHAAVLQLEP----LAAARSYQQLADALVEATPALEAFFDGPDSVMV 686 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 DD ++R NRL+LL ++N ++ I Sbjct: 687 MADDLDLRRNRLNLLGVLRNQASVLARFDLI 717 >gi|318041339|ref|ZP_07973295.1| glycyl-tRNA synthetase beta subunit [Synechococcus sp. CB0101] Length = 721 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 179/749 (23%), Positives = 305/749 (40%), Gaps = 78/749 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+PA A L ++ L E + + +R TP R+ L + L Sbjct: 1 MSTFLLEIGTEELPADFARLALPQLEQMVRRDLSEARLGHGAIRCTSTPRRIALQVHDLQ 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +P+ EER GP G A +GF + G+ + ++ KG A + Sbjct: 61 SAAPDLEEERKGPPAAQAFKDGVPTPAAEGFAKRCGIAAEALE--VRETPKGPFVFATVL 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L + +P I + + MRW + S + RP++ ++ +L E Sbjct: 119 ERGRPAPELLSSWIPQWISSLQGRRFMRWGSGES-----RFSRPVRWLVALLDREVV-PV 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ E+ GN + HR H + + S Y L A V +D R I + + Sbjct: 173 RLEGSDPEVVSGNSSRSHRLHG-GAVAINSASAYDEALAAAGVQVDRSQRAAWIRDTVAK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A ++ DL EE+ LVE + GS D+ YL LP E++ ++ +Q+ Sbjct: 232 AAESLEATADLPNDLFEELTDLVEAPLLIEGSVDEHYLALPAEVLSTVMRAHQRYVPLYR 291 Query: 295 -----------REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L F+ + N + + +GN RV+ ARL DA F D+ Sbjct: 292 RGADQDPLALDARTSLLPRFLCIGNGLP-EALDTVRRGNERVLKARLADAEFFVNADRAV 350 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 + + + F L L R+ RL+ + V ++ L Sbjct: 351 PSIDRRDQLARVTFAAGLG-SLLDRVERLEWITDVLLEQLA------------------L 391 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 +A A A L K DL +++V EFPELQG +G +Y + + E A+ EH PRG Sbjct: 392 PEATAAHARHAAHLCKHDLVSQMVGEFPELQGVMGGKYLLAEGEPREVALAVLEHYLPRG 451 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI-- 521 +++P + V+LA++L+ L++ +A E+PSGS DPYALRRA G+++I+ Sbjct: 452 AGDDLPASDAGAVVALAERLELLLSIYAKGERPSGSSDPYALRRAGNGVLQILWAKGWRL 511 Query: 522 ------------------DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAI---- 559 D + +L R++ L + DL++A+ Sbjct: 512 DLLQLLQRACAHWAVLLPDFKVEAGALAADLGDLLRQRVQSLLEEVGTDADLVQAVAGDS 571 Query: 560 --LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--IS 615 L + + L + +S R ++ + +S ++ Sbjct: 572 VPLERLLRDPADARERADLLMQLRASGDLAAVQAVVTRAARLAEKGDLSATVLSAAGVVN 631 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNV 672 +E + VI + + RY Q+ L + + FFD V+V Sbjct: 632 AALFEKSSEAGMLQVIDQLEP-VATATGADRYSQLAQGLIAGTAALAAFFDGDQSVMVMA 690 Query: 673 DDREVRDNRLSLLQYIKNIILIVINVQKI 701 DD +R NRL+LL ++N ++ + +I Sbjct: 691 DDPAIRTNRLNLLGVLRNQASVLADFSRI 719 >gi|306826894|ref|ZP_07460194.1| glycyl-tRNA synthetase beta subunit [Streptococcus pyogenes ATCC 10782] gi|304430912|gb|EFM33921.1| glycyl-tRNA synthetase beta subunit [Streptococcus pyogenes ATCC 10782] Length = 679 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 340/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ E E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTELTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD I Sbjct: 132 G-VTEVLSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLNIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V++D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D++LL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DENLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NDQAIENVIKGNEKVLVARLEDGEFFWREDQKLQ--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV---DRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A+ + V DRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVARAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EA+L + ++ + L + + + Sbjct: 517 ANKADVMNFIRARVDKMM-GKAAPKDIREAVLESSTFVVPEMLAAAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAA------- 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + + ++ I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 624 QQLEQVFALSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|94989012|ref|YP_597113.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS9429] gi|229558578|sp|Q1JKK0|SYGB_STRPC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94542520|gb|ABF32569.1| glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS9429] Length = 679 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 196/713 (27%), Positives = 343/713 (48%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V++D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMG+F+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGNFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NDQAIENVIKGNEKVLVARLEDGEFFWREDQKLQ--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV---DRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A+ + V DRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ + ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGVVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EAIL + ++ + + L + + + Sbjct: 517 TNKADVMNFIRARVDKMM-GKAAPKDIREAILASSTFVVPEMLAVAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAA------- 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + + ++ I FFD +V +D+ +++NR+++L + + + ++ Sbjct: 624 QQLEQVFALSPVINDFFDNTMVMAEDQALKNNRVAILSDLVSKAKTIAAFNQL 676 >gi|170017337|ref|YP_001728256.1| glycyl-tRNA synthetase, beta subunit [Leuconostoc citreum KM20] gi|238688968|sp|B1MZ60|SYGB_LEUCK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169804194|gb|ACA82812.1| Glycyl-tRNA synthetase, beta subunit [Leuconostoc citreum KM20] Length = 686 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 205/731 (28%), Positives = 335/731 (45%), Gaps = 76/731 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L + +++ + TP RL L L ++ Sbjct: 1 MSTFLLEIGLEEVPAHLVTSSESQLVARTKEFLAAHRLTVGDIKPFSTPRRLALQLCDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP V G KA GF R G + ++ Sbjct: 61 EESEALSEEKRGPSVERAKDENGEWSKAAQGFARGQGATPEA---FEERDG---YVWLTK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +L I + ++ + M+W+ +F ++RP++ ++ +L E Sbjct: 115 HTTGVPANQILSQIGEEVVSQMKFTTYMKWANH-----SFLYVRPIRWLVALL-----DE 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I+ ++ +I G +T GHRF + + + Y L+ A VL D E R+ I + Sbjct: 165 QVINFNVLDIATGRVTRGHRFLSTEHVTISDAQAYEETLQSAYVLADAENRKAQIKSQLE 224 Query: 234 RLASAVGLELVED----KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A+ L D +DLLEE+ +VEW F GSFD+KYL +P+E++ +++ +Q+ Sbjct: 225 TIANRNHWVLSLDNAPAQDLLEEVNNIVEWPTAFSGSFDQKYLEVPDEVLITSMREHQRF 284 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F R G L F+ V N + + GN +V+ ARLEDA F++ DQ Sbjct: 285 FYVRDTTGKLLPHFLSVRNGDTAHLDNV-IAGNEKVLVARLEDAEFFYREDQQ------- 336 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV- 408 K + MA++ +VFH KIGT E + R+ +L +K+A +D D Sbjct: 337 -------------KKIADYMAKVKT--LVFHEKIGTVYEHMQRVGLLAEKLADALDFDDD 381 Query: 409 --ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + RA + K DL T +V EF ELQG +G+ YA L EN AI EH P Sbjct: 382 KKTDLARAAEIYKFDLMTGMVGEFDELQGVMGEHYARLFGENERVATAIREHYMPTSANG 441 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 N+ + + +++ADKLD ++ F+A N PSGS DPY LRRA G++R + I L Sbjct: 442 NIAKSDVGAVLAIADKLDAIVTFFAANLIPSGSNDPYGLRRAATGVVRTLTTKHWHIALQ 501 Query: 527 QF--------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIV 571 + ++ F DR++ D DIR D++ A +++ + Sbjct: 502 PVLAEFMAATGTVTASADLMAVLSFVVDRVRKLALDDDIRQDIVSAGTDNFATADIVYLT 561 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D I+ L + + + R+ ++ +SL ++PQ E EK LYA Sbjct: 562 DRIQVLANHAHDNNFREVISALTRVARLAEK-----TPVSLNVNPQLFENETEKALYAAT 616 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 S+ E+ + + L ++ PI +FD +VNVD+ ++++NR + L I + Sbjct: 617 SELQLVALEANGAE---ALYQALAALQMPISAYFDATMVNVDNEQIKNNRYAQLNIINQL 673 Query: 692 ILIVINVQKIV 702 I + N++ IV Sbjct: 674 IAGLGNLEDIV 684 >gi|225859236|ref|YP_002740746.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae 70585] gi|254781863|sp|C1C870|SYGB_STRP7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225720159|gb|ACO16013.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae 70585] Length = 678 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIV-DVLKSLTFPVSMHWA-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF +QS Y DL + V+ DP R I++ + + + + Sbjct: 181 SRVSRGHRFLGKETK-IQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHDVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ D V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKADLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + S Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETLVLSGPAS------- 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|2654226|emb|CAA05843.1| aminoacyl-t-RNA synthetase [Arabidopsis thaliana] Length = 1067 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 176/720 (24%), Positives = 336/720 (46%), Gaps = 67/720 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F++EI +EE+P + A+E L ++++ LL+ + + + ++ + TP RL + + +S Sbjct: 386 FIIEIGTEEMPPQDVINASEQLRVLVLELLENQRLRHGAVKAFGTPRRLVVLVDAMSSKQ 445 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E GP G KA +GF R G+ +K K + A + +P Sbjct: 446 LEEEVEVRGPPASKAFDDEGNPTKAAEGFSRRYGVPLEK--LYRKVSGKTEYVHARVTEP 503 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 RL +VL +P + K+ +PKSMRW+ S+ + RP++ ++ + + ++ Sbjct: 504 ARLALEVLSEDLPGILAKISFPKSMRWN------SSVIFSRPIRWVMAL-----HGDLVV 552 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GN++ G R A + VQ+ + Y + + + ++ E R+ IL ++ LA Sbjct: 553 PFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEERKKIILEKSNALA 612 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +V LV ++LL E+ LVE +G F + +L LPEEL+ + ++ +QK F Sbjct: 613 KSVNGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVMQKHQKYFSIIDES 672 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+N ++ + +GN V+ AR EDA F++ D Sbjct: 673 GQLLPYFIAVANGAINE--DVVKKGNEAVLRARYEDAKFFYEVDTR-------------- 716 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDR 413 K + +L ++FH K+GT ++++R++ + K+ + D L V+ Sbjct: 717 ------KRFSEFRDQLQ--GILFHEKLGTMLDKMNRLKKMVSKLCLALKIDEDLLPVVED 768 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+ +DL T +V EF L G + + YA+ + +A+ E PR + +P Sbjct: 769 AASLAMSDLATAVVTEFTALSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPKTDA 828 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------- 526 + +++ D+LD+L+ +A +PS + DP+ LRR + G+++I++E ++ Sbjct: 829 GMVLAIGDRLDSLVGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKRVLELAA 888 Query: 527 -------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + +++ F RL+ L D + +++ ++L +N + Sbjct: 889 SVQPRKVEANTVEDVYQFVTRRLEQLLVDNGVSPEVVRSVLAERGNNPCLAARTAYKTEK 948 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 K + + R +I+ K+ + +E+ E+ L++ + I Sbjct: 949 LSKGEMFPKIVEAYSRPTRIVR---GKDVGVGVEVDENAFETPQERTLWSTYTSIKDRIH 1005 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + +I + EP+E FF+ V V V++ VR NRL+LL I N+ VI++ Sbjct: 1006 TGIEIEEFTEISM---QLVEPLEDFFNNVFVMVEEERVRKNRLALLNNIANLPKGVIDLS 1062 >gi|294783854|ref|ZP_06749176.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium sp. 1_1_41FAA] gi|294479666|gb|EFG27445.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium sp. 1_1_41FAA] Length = 687 Score = 495 bits (1275), Expect = e-137, Method: Composition-based stats. Identities = 197/727 (27%), Positives = 345/727 (47%), Gaps = 72/727 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EEIPAR +A DL LK + Y+ ++ Y TP RL L + ++ Sbjct: 3 LLFEIGMEEIPARFLSQALTDLKSNFEKKLKNNRIKYEGIKTYGTPRRLVLVVDEVADMQ 62 Query: 64 PEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E +GP + G KA +GFL + + +K D KG+ Sbjct: 63 EDLDELNIGPSKDRAYKDGELSKAGEGFLNAYKIDESQIEIVKND--KGEYIAFKRFAKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 E +L I+ + + +PKSM+WS + RP++ L + +++ Sbjct: 121 EATEKLLPEILKELVLEETFPKSMKWSD-----KTLRFARPIEWFLALY-----GNNVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ I N + GHRF +V S++ Y + E V++D RR ++ + A Sbjct: 171 FEIEGIKSSNKSKGHRFFG-KEFEVISVEDYFNKIRENNVIIDISERRK-MIEEMINKAL 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F ++G Sbjct: 229 LEDEKADIDEGLLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRYFPILDKKG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI++ N D + +GN +V++ARL DA F++ D Sbjct: 289 KLLPKFIVIRNGI--DFSQNVKEGNEKVLSARLADARFFYQED----------------- 329 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD--RAI 415 L PLDQ + +L VVF +GT +V R + + + + + D R + Sbjct: 330 ---LKIPLDQNVEKLKT--VVFQKDLGTMFSKVKRTEKIAEFLIGKLKYNYMKADILRTV 384 Query: 416 VLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L+KADL + ++ +EF +LQG +G +YA+ + E I I+EH PR + +P+ Sbjct: 385 KLAKADLVSNMIGEKEFTKLQGLMGSKYAMERGEEIGVAIGIKEHYYPRFQGDLLPSGIE 444 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 I L+D+ DTL+ + + P+GSKDP+ALRR LGI+ II+ I+I L + ++ Sbjct: 445 GIITGLSDRTDTLVGCFGVGLIPTGSKDPFALRRTALGIVNIIINANINISLKELVKVSL 504 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + +++ F R+ D D R D++ A+L + DN+ ++++ Sbjct: 505 DALEADKVLKVDRAKVEADVLEFLKQRMINVFTDMDYRKDIVLAVLDRDADNITNALEIV 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K ++E + K E L AKR+ I+ ++ + + E EK LYA Sbjct: 565 KVISEKLALNKLEDLLQVAKRVTNIITK-----GNNNVTVKEKLFKEEIEKTLYAETKKV 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 G ++S+ Y + + S+ I+ +F+ V+V +D+ VR+NR++ L YIKN+ Sbjct: 620 GEEAEKSVKENEYADYFEKMVSLAPTIDKYFETVIVMDEDKNVRENRINQLTYIKNLFDR 679 Query: 695 VINVQKI 701 + + KI Sbjct: 680 IAYLNKI 686 >gi|71904089|ref|YP_280892.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS6180] gi|123747755|sp|Q48RX3|SYGB_STRPM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71803184|gb|AAX72537.1| glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS6180] Length = 679 Score = 495 bits (1275), Expect = e-137, Method: Composition-based stats. Identities = 196/713 (27%), Positives = 342/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V++D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMG+F+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGNFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NDQAIENVIKGNEKVLVARLEDGEFFWREDQKLQ--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV---DRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A+ + V DRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EAIL + ++ + + L + + + Sbjct: 517 TNKADVMNFIRARVDKMM-GKAAPKDIREAILASSTFVVPEMLAVAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAA------- 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + + ++ I FFD +V +D+ +++NR+++L + + + ++ Sbjct: 624 QQLEQVFALSPVINDFFDNTMVMAEDQALKNNRVAILSDLVSKAKTIAAFNQL 676 >gi|225869964|ref|YP_002745911.1| glycyl-tRNA synthetase beta chain [Streptococcus equi subsp. equi 4047] gi|254781862|sp|C0M9J7|SYGB_STRE4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225699368|emb|CAW92792.1| glycyl-tRNA synthetase beta chain [Streptococcus equi subsp. equi 4047] Length = 679 Score = 495 bits (1275), Expect = e-137, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 325/713 (45%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + Y + + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLVERMADFLKANRLSYDAIEGFSTPRRLAVRVLGLADQQTDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + +DVL Sbjct: 75 SKKIALDADGQFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKQAKDVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ ++F +IRP+ S++ +L ++ ++LD +I Sbjct: 132 A-VPEVLASLTFPVSMHWAN-----NSFDYIRPVHSLIVLL-----DDEPLELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G I+ GHRF + S D Y DL V+ + R+ I+ + + +++ Sbjct: 181 GRISRGHRFLGEET-SITSADSYEADLRSQFVIASAKERQEMIIAQIRAIEAEQKVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DEDLLNEVLNLVEYPTAFMGSFDPKYLEIPEEVLVTSMKNHQRYFVVRDQAGKLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNAKH-LQNVIKGNEKVLVARLEDGEFFWREDQKL--------------------SI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L V FH KIG+ E + R +V+ +A A+ + V RA + K DL Sbjct: 339 EDLVAKL--AHVTFHEKIGSVAEHMERTKVIAAFLADQAGLSEAEKSAVARAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLTGEAAAVATAIREHYLPNSAEGELPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEHFGWSIPMDKLIDSLYELSFDSLTY 516 Query: 529 IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + I D+ EA+L + + ++ + L + Sbjct: 517 QHKAEVLDFICARVDKMMGS-AIPKDIREAVLASSSFVVPELLARAEALAAASQLDTYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R+F + I + E+ L + + Sbjct: 576 AVESLSRVFNLAKKAVDAVL-----IDASLFENDYERALAQAVDSL-------VLSGSAK 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I+ FFD +V +D +R NRL+LL + + + ++ Sbjct: 624 EQLAQVFALSPVIDDFFDHTMVMTEDEAIRRNRLALLAELVKKVETIAAFDRL 676 >gi|87124315|ref|ZP_01080164.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. RS9917] gi|86167887|gb|EAQ69145.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. RS9917] Length = 719 Score = 495 bits (1275), Expect = e-137, Method: Composition-based stats. Identities = 189/755 (25%), Positives = 319/755 (42%), Gaps = 95/755 (12%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLEI +EE+PA A L + G LKE + + ++ TP RL + ++ L Sbjct: 3 STFLLEIGTEELPADFARLALPQLKATVTGDLKEWRLNHGAIQVTSTPRRLAVIVENLVE 62 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+R GP V G A GF R G+ + + KGD A + Sbjct: 63 RQEDLREDRKGPPVAQAYVDGQPGPAALGFARRCGVDPSALE--VRATPKGDCVFATVLV 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L+ +P + + + MRW + + RP++ ++ + E Sbjct: 121 EGQSTLSLLQERIPGWVDALQGRRFMRWGSGDQ-----RFSRPVRWLVALF-----GEVC 170 Query: 176 IDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + + L + G + HR + + + Y L A V++D R I Sbjct: 171 VPVTLAASDPVVHSGRSSRAHRLF-DRTVDLADAEAYGAALAAAGVVVDRNKRAEIIRTA 229 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + L EE++ LVE +V GS +YL LP E+I ++++Q+ Sbjct: 230 LKERAEVLQGVADCPPALFEELVDLVEAPRVLTGSIADRYLALPPEVIITVMQSHQRYVP 289 Query: 292 TRTR-----------EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 R VL F+LVSN AS I +GN RV++ARL DA F D Sbjct: 290 LRRPGVCMDPLGLSAREVLCPDFLLVSNGLAS-ADDRIREGNQRVLSARLADAEFFLSVD 348 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + +P R L V F +G+ +R RI L ++ Sbjct: 349 RR--------------------QPSSARREALQ--AVTFAEGLGSLRDRSDRIEHLAGQL 386 Query: 401 AQLID---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 + ++ A RA L K DL +++V EFPELQG IG +Y + + E+ + A+ E Sbjct: 387 LERLECPQATQEAARRAAHLCKHDLVSQMVGEFPELQGLIGGKYLLEEGESRAVALAVVE 446 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H +PRG + +P++ V+LA++L+ L++ +A E+PSGS DPYALRRA GI++I+ Sbjct: 447 HYQPRGAGDALPSSDAGAVVALAERLELLLSIFAKGERPSGSSDPYALRRAGNGILQILW 506 Query: 518 ENKIDIPLSQFIED-----QNLILFF---------------HDRLKLYLHDRDIRHDLIE 557 E + L + ++ Q L+ F R+ L D DL++ Sbjct: 507 ERGWRLDLLELLKGAAGRWQELLPAFAVDTDVLVRDLVLLLRQRIHSQLEDDGHAPDLVQ 566 Query: 558 AILRPEND------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR--E 609 A+ + + ++D I+ L++ + +R ++ + + Sbjct: 567 AVAGDAVSDERLLCDPIDVLDRIRLLSQLRQQNRLVAVQAVVQRAARLAEKGDLARGVLD 626 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD--- 666 + + P+ +E+ +Y V+ + Y + L +E FFD Sbjct: 627 AADTVDPKRFASPSEQAMYGVVQRLKP----LAQARNYQALAHALVEATPTLEAFFDGDQ 682 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+V DD E+R NRL+LL ++N ++ ++I Sbjct: 683 SVMVMADDPELRRNRLNLLSVLRNQAGVLAQFERI 717 >gi|237739148|ref|ZP_04569629.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 2_1_31] gi|229423748|gb|EEO38795.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 2_1_31] Length = 687 Score = 495 bits (1274), Expect = e-137, Method: Composition-based stats. Identities = 195/727 (26%), Positives = 346/727 (47%), Gaps = 72/727 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EEIPAR +A DL LK + Y+ ++ Y TP RL L + ++ Sbjct: 3 LLFEIGMEEIPARFLSQALTDLKSNFEKKLKNNRIKYEGIKTYGTPRRLVLVVDEVAEMQ 62 Query: 64 PEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E +GP + G KA +GFL + + +K D KG+ Sbjct: 63 EDLNELNIGPSKERAYKDGELSKAGEGFLNAYKIDESQIEIVKND--KGEYIAFKRFAKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 E +L I+ + + +PKSM+WS + RP++ L + +++ Sbjct: 121 EATEKLLPEILKELVLEETFPKSMKWSD-----KTIRFARPIEWFLALY-----GNNVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ I N + GHRF +V S++ Y++ + E V++D RR ++ + A Sbjct: 171 FEIEGIKSSNKSKGHRFFG-KEFEVSSVEDYLKKIRENNVIIDISERRK-MIEEMINKAL 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F ++G Sbjct: 229 LEDEKADIDEGLLDEVTNLVEHPYAIVGNFSEDFLEVPQEVLIISMKVHQRYFPILDKKG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI++ N D + +GN +V++ARL DA F++ D Sbjct: 289 KLLPKFIVIRNGI--DFSQNVKEGNEKVLSARLADARFFYQED----------------- 329 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD--RAI 415 L PLDQ + +L VVF +GT +V R + + + + + D R + Sbjct: 330 ---LKIPLDQNVEKLKT--VVFQKDLGTMFNKVKRTEKIAEFLIGKLKYNYMKADILRTV 384 Query: 416 VLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L+KADL + ++ +EF +LQG +G +YA+ + E I I+EH PR + +P+ Sbjct: 385 KLAKADLVSNMIGEKEFTKLQGLMGSKYAMERGEEIGVAIGIKEHYYPRFQGDLLPSGIE 444 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 I L+D++DTL+ + + P+GSKDP+ALRR LGI+ II+ I+I L + + Sbjct: 445 GIITGLSDRIDTLVGCFGVGLIPTGSKDPFALRRTALGIVNIIINANINISLKELVNVSL 504 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + +++ F R+ D R D++ A+L + DN+ ++++ Sbjct: 505 DALQADQVLKADRAKVEADVLDFLKQRMINVFTDMKYRKDIVLAVLDRDADNITNALEIV 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K ++E + K E L AKR+ I+ ++ + + E EK LYA Sbjct: 565 KVISEKLALNKLEALLQVAKRVTNIITK-----GNNNVTVKEKLFKEEIEKTLYAEAKRI 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 G ++S+ Y + + S+ I+ +F+ V+V +D+ +R+NR++ L YIKN+ Sbjct: 620 GEEAEKSIKENEYADYFEKMISLVPTIDKYFEAVIVMDEDKNIRENRINQLTYIKNLFDR 679 Query: 695 VINVQKI 701 + + KI Sbjct: 680 IAYLNKI 686 >gi|157964999|ref|YP_001499823.1| glycyl-tRNA synthetase subunit beta [Rickettsia massiliae MTU5] gi|157844775|gb|ABV85276.1| Glycyl-tRNA synthetase beta chain [Rickettsia massiliae MTU5] Length = 675 Score = 495 bits (1274), Expect = e-137, Method: Composition-based stats. Identities = 226/702 (32%), Positives = 345/702 (49%), Gaps = 62/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA M A E I + +E + + ++ + P R+ L+ L + K EE G Sbjct: 23 IPAFMHKNAEEGYLNIFTKIFEENEI-FAKVQVFVGPRRITLHATHLPKITLPKEEEIKG 81 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y + + +R I+++L I+ AI Sbjct: 82 PNIEAPEAAINGFCKAHNVSKLELST--KLISNQLYYFFIKKTEEREIKEILPEIIIEAI 139 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ + + NITYGH Sbjct: 140 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPVQFGHLTANNITYGH 189 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I LAS+ L + ED L+EE Sbjct: 190 RLTDNKKLEVTDFEDYRNKLLENHVILERTKRETIIKTGLLELASSHDLIIKEDNRLVEE 249 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + + Sbjct: 250 VAGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFT 309 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F K+D ++K L+ R+ +L Sbjct: 310 NA-ELVIQGNEKVLSARLSDALYFCKQD--------------------IAKTLESRLGQL 348 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHAK+G E++ RI + IA + + A L K+DL +E+V EFP+ Sbjct: 349 E--AVTFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVGEFPD 402 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N I +H KP+G +NVP+ ++ +LADKLD+L+ Sbjct: 403 LQGIMGYYYAKHEGLNAEIAAVIRDHYKPQGLSDNVPSGNAALL-ALADKLDSLVGLMIA 461 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-------------LILFFH 539 E P+GS DPYALRR LGIIRIILENK+++ + I +I FF Sbjct: 462 GEAPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFE 521 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y D LI A+L NL+ + L EF G++ L + KR I Sbjct: 522 ERAKFYFK-NDYDIALINAVLDL---NLVDTNFKLDALKEFLIEDAGKQLLNAYKRASNI 577 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 578 II----GDQKITGLVDASLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSLLT 633 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ I + V ++ Sbjct: 634 PITSFFDNVLVNDSDPKIAQNRLSLLQNICELFDKVAKFNRL 675 >gi|322412455|gb|EFY03363.1| glycyl-tRNA synthetase subunit beta [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 679 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 203/713 (28%), Positives = 338/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAARVIGLANQQTDLTEDFKGP 74 Query: 74 R-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDAAGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + ++ +P SM W+ ++F +IRP+ + +L ++ +DL+ +I Sbjct: 132 G-VAEVLAEMTFPVSMHWA-----KNSFEYIRPVHTFTVLL-----DDEALDLEFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I++ + +A G+++ Sbjct: 181 GRVSRGHRFLG-KETTITSADSYEDDLRSQFVIADAKERQEMIVDQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L FI Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ Sbjct: 300 VRNG-NDQAIDNVIKGNEKVLVARLEDGEFFWREDQKLQV-------------------- 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A+ + VDRA + K DL Sbjct: 339 ADLVAKL--ANVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L EN + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGENPAVATAIREHYLPDAAEGVLPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEHFGWRIPMDKLVDSLYDLSFDSLNY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + I D+ EA+L + I+ + L + + Sbjct: 517 ANKVDVMNFIRARVDKMM-GKAIPKDIREAVLESSTFVVPEILAAAEVLVNASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + P + E+ L+A I Sbjct: 576 AVESLSRAFNLAEKA-----DASVRVDPSLFENDHEQALFAAIQSLSLEGSA-------E 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V DD+ +++NRL+LL + + ++ Sbjct: 624 NQVEQVFALSPVINDFFDNTMVMADDQAIKNNRLALLAVLVGKAKSIAAFNQL 676 >gi|257065851|ref|YP_003152107.1| glycyl-tRNA synthetase, beta subunit [Anaerococcus prevotii DSM 20548] gi|256797731|gb|ACV28386.1| glycyl-tRNA synthetase, beta subunit [Anaerococcus prevotii DSM 20548] Length = 687 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 203/731 (27%), Positives = 348/731 (47%), Gaps = 74/731 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIP+ + L L++E + +++ TP R + L + Sbjct: 1 MSNYLLEIGVEEIPSDYVKNTKKQLEDKFKKLIEENKLTCESISVESTPRRFAILLNNVE 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 EK GP V G KK + GFLR G + ++ K D Sbjct: 61 ADLTEKTVSVKGPSVKIAYDEGGEPKKPLLGFLRGQGADLSD--VVIREFKGEDYIYVEK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ + + +VL+ V ++ + +P+SMRW+ + W RP++ + IL + Sbjct: 119 KEKSKSVAEVLRENVYELVKSISFPRSMRWA-----GKSIRWARPIRWFVSIL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++D D + I G +T GHR + I++ + +Y + L+E V+L + R++ IL + Sbjct: 169 EVLDFDAEGISVGRVTKGHRSLGSNHIEIDEIQNYEKLLKENYVILKYKDRKDIILRGLN 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 RL+S VG E ++D+ LL+E+I +VE+ V +G DK YL +P+E+I +K +Q+ F Sbjct: 229 RLSSEVGGEYMKDEALLDEVINIVEYPTVLIGGIDKDYLEIPKEVITTPMKDHQRYFPVL 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L F++V N + +V+GN +V+ ARLEDA F++ D Sbjct: 289 DENKNLLPYFLVVRNGD-EEFKENVVEGNKKVLVARLEDAKFFYEID------------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD- 412 + KPL+ + L+ ++ F +G + R+ L ++ Q + + Sbjct: 335 -------MKKPLEAYVDELE--NLAFFEGLGNMKLKTERLMDLTERYRQALAIGEDMAHP 385 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL T++V EF ELQG +G+ YA E AIEE PR +P Sbjct: 386 IGRAAYLSKADLVTKMVVEFTELQGTMGRIYASKSGEEERVATAIEESYMPRSSGSALPK 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 I +S+ADK+DT++ +AI + +GS+DP+ LRRA LGII I LEN IDI L + Sbjct: 446 TITGIILSIADKMDTIVGLYAIEKYVTGSQDPFGLRRACLGIINIFLENSIDIDLRKLVN 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++ FF DRLK L D + +D + +++ + N++ IV Sbjct: 506 DALLVYTEKNELAFDYDTAMDKVLDFFRDRLKNKLIDDGVSYDTVNSVINTDELNIIKIV 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K ++ F E + RI + + + E+ + E+ Y I Sbjct: 566 KKAKSIDSFL--EDNEDQVSYFTRIVNL------SDYRVDAEVREDLFENDLERSFYEKI 617 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ S + + + + + E + D ++NVDD EV++NR+++L + Sbjct: 618 TELE-DFSPSAEA-NFLEELNRIKETSEIGNTYLDNTMINVDDEEVKNNRIAMLNKLARR 675 Query: 692 ILIVINVQKIV 702 I ++++++IV Sbjct: 676 IEQILDIKEIV 686 >gi|56807942|ref|ZP_00365761.1| COG0751: Glycyl-tRNA synthetase, beta subunit [Streptococcus pyogenes M49 591] Length = 679 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 194/712 (27%), Positives = 335/712 (47%), Gaps = 74/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLAEQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T D ++ K + + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTT--DAIEFREVKGVEYVYVTKHEAGKPAKEVLLG 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD +I G Sbjct: 133 -VTEVLSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ D Sbjct: 182 RVSRGHRFLGTET-TITSADSYEADLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L F+ V Sbjct: 241 EDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVSV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNG-NDQAIENVIKGNEKVLVARLEDGEFFWREDQKLQ--------------------IA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV---DRAIVLSKADLC 423 +A+L +V FH KIG+ E + R RV+ +A+ + V DRA + K DL Sbjct: 340 DLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEDAAVARAIREHYLPDAAGGALPETKVGAVLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTYA 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 +++ F R+ + + D+ EA+L + ++ + L + + + Sbjct: 518 NKADVMNFIRARVDKMM-GKAAPKDIREAVLESSTFVVPEMLAAAEALVKASHTENYKPA 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + + S+++ P E E L A I + Q Sbjct: 577 VESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLSAAIQGLTLAGSAA-------Q 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 625 QLEQVFALSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|330881826|gb|EGH15975.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. glycinea str. race 4] Length = 560 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 180/594 (30%), Positives = 287/594 (48%), Gaps = 51/594 (8%) Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 +L TIV ++ +P K MRW ++RP + ++ + ++++D + Sbjct: 2 LLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVDCTILA 51 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G + GHRFH P +++ S Y+ DL A VL D RR I LA+ Sbjct: 52 QSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELATQQEGT 111 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F EG L Sbjct: 112 AIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDAEGKLLPR 171 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 172 FITVANIESKD-PAQIVTGNEKVVRPRLTDAEFFFKQDK--------------------K 210 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 + L+ RL +VVF A++G+ ++ R+ L IA I D RA +LSK DL Sbjct: 211 QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLLSKCDL 268 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 +E+V EFPE+QG G YA E A+ E PRG +PT V++ADK Sbjct: 269 SSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAVAIADK 328 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 329 LDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQFGAKIKP 388 Query: 532 ----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + ++ F DRL+ D + + ++ + + L ++ + F + Sbjct: 389 AGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAFRKLPQAA 448 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 KR+ +L+ E I+ + P+Y E LY+ I +Q ++Y Sbjct: 449 ALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADHAVQPMAAERQY 505 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ + Sbjct: 506 SESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADISLL 559 >gi|209559814|ref|YP_002286286.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes NZ131] gi|238064855|sp|B5XMM9|SYGB_STRPZ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|209541015|gb|ACI61591.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes NZ131] Length = 679 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 194/712 (27%), Positives = 335/712 (47%), Gaps = 74/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T D ++ K + + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTT--DAIEFREVKGVEYVYVTKHEAGKPAKEVLLG 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD +I G Sbjct: 133 -VTEVLSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ D Sbjct: 182 RVSRGHRFLGTET-TITSADSYEADLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L F+ V Sbjct: 241 EDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVSV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNG-NDQAIENVIKGNEKVLVARLEDGEFFWREDQKLQ--------------------IA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV---DRAIVLSKADLC 423 +A+L +V FH KIG+ E + R RV+ +A+ + V DRA + K DL Sbjct: 340 DLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEDAAVARAIREHYLPDAAGGALPETKVGAVLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTYA 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 +++ F R+ + + D+ EA+L + ++ + L + + + Sbjct: 518 NKADVMNFIRARVDKMM-GKAAPKDIREAVLESSTFVVPEMLAAAEALVKASHTENYKPA 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + + S+++ P E E L A I + Q Sbjct: 577 VESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLSAAIQGLTLAGSAA-------Q 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 625 QLEQVFALSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|326803489|ref|YP_004321307.1| glycine--tRNA ligase, beta subunit [Aerococcus urinae ACS-120-V-Col10a] gi|326651577|gb|AEA01760.1| glycine--tRNA ligase, beta subunit [Aerococcus urinae ACS-120-V-Col10a] Length = 697 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 194/720 (26%), Positives = 332/720 (46%), Gaps = 59/720 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + +L+EI EE+PA+ +E + L E + Y ++ + TP R + +K Sbjct: 1 MNNHSYLIEIGLEEMPAQYVRSISEQFQERVENFLDENRLSYGSIETFATPRRFAVLVKE 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ EE GP G KA GF R GL K+ K D Sbjct: 61 LADRQSTFEEEAKGPAKRIAQDEAGNWTKAAMGFARGKGLTIDD--IYFKELKGEDYAYL 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 +R + +VL + + ++ +P SM W + F +IRP+ I+ +L Sbjct: 119 TVRSEGLNVVEVLAD-IKNCVSEMNFPVSMHWDSHE-----FRYIRPVHWIVSLL----- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++I ++ + GN++ GHRF +++ Y LE+A V++D + R+ I Sbjct: 168 DKEVIPFNVLAVEAGNLSRGHRFLHNESVEISHASLYEESLEKAAVIVDQDKRKQMIKEQ 227 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA ++ D+DLLEE+ +VE+ F+G FD+KYL LP ++ +++ +Q+ F Sbjct: 228 IEALAKENNYQVPLDQDLLEEVTQIVEYPTAFVGDFDEKYLSLPAPVLITSMREHQRYFA 287 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +EG L FI + N D + GN +V+ ARLEDA+ F + DQ + + + K Sbjct: 288 VEDQEGKLLPHFIALRNG-NHDHIETVKNGNEKVLVARLEDAMFFLEEDQKHTIDDFAQK 346 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + + F+ ++ +++ + H L Q ID Sbjct: 347 LTDVTFHAEIG----SMKQKMERTGKIAHYLYENWAMHEVFAGQLATDFTQEID------ 396 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 R + K DL T+IV EF ELQG IG+ YA E+ AI EH P G +P + Sbjct: 397 -RTSAIYKFDLVTQIVDEFSELQGIIGEIYAKKAGEDPQVATAIREHYLPSGNASELPQS 455 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI----PLSQ 527 + + +++DKL+++I+F+AI + PSGS DP+ALRR +GI+ I+ + + L Sbjct: 456 PLGLLFAISDKLESIISFFAIGKIPSGSNDPFALRRQMIGILAILEAEHLPLEWHQALKD 515 Query: 528 FIED-------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + Q +I F DRLK L D++IR D+ +A + ++LTI+ Sbjct: 516 IFDQVYDFDQNKQVELSQAIIQFLSDRLKNNLADKEIRFDISQAAREAKYIDVLTIIQSA 575 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + LN + + + +RI I+ ++ E+ L ++ +E LY +SD Sbjct: 576 ELLNAHKEDEDYKDNVEAWQRINNIILKVSQEEVELPL-VNEDLFESNSESDLYQAVSDL 634 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + + + ++ I FF+ +V D++++R+NRL+LL I I Sbjct: 635 RL-------DEGVEEAYEEITALTPIITQFFEDNMVFTDNQDIRNNRLALLSLIDQAITK 687 >gi|300173190|ref|YP_003772356.1| glycyl-tRNA synthetase subunit beta [Leuconostoc gasicomitatum LMG 18811] gi|299887569|emb|CBL91537.1| glycyl-tRNA synthetase, beta subunit [Leuconostoc gasicomitatum LMG 18811] Length = 687 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 193/731 (26%), Positives = 327/731 (44%), Gaps = 76/731 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + +++ Y TP RL + L +S Sbjct: 2 MSTFLLEIGLEEMPAHLVTSSEAQLIARTTEFLSEHRLSVGHIQPYSTPRRLAVELIDIS 61 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G+ + ++ Sbjct: 62 SESEALSEEKRGPSIERAKDDNGNWSKAAQGFARGQGMTP------ENFEERDGYVWLTK 115 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P D+L +I I ++ + M+W+ +AF ++RP++ I+ +L E Sbjct: 116 HTPGVSAADILASIGEEVIAQMKFTTYMKWAN-----NAFLYVRPIRWIVALL-----DE 165 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K+ID ++ ++ G +T GHRF + I + + Y+ L+ A V++D R+ I + Sbjct: 166 KVIDFNILDVKTGRMTRGHRFLSNEHITIANAGVYVATLKAAYVIVDAATRKGIIQSQLE 225 Query: 234 RLASAVGL----ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A+ ++LLEE+ +VEW F G F+ KYL LP+E++ +++ +Q+ Sbjct: 226 DIANQNNWLLDLSSDAAQNLLEEVNNIVEWPTAFSGGFENKYLELPDEVLMTSMREHQRF 285 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + L F+ V N S+ ++ GN +V+ ARLEDA F++ D+ Sbjct: 286 FYVTNQANDLLPHFLSVRNG-NSEHLDNVIAGNEKVLVARLEDAEFFYQEDKQ------- 337 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-- 407 K +D M ++ +VFH KIGT E + R+ L +A + D Sbjct: 338 -------------KTIDDNMTKVK--KLVFHEKIGTVYEHMQRVGRLAASLADELQFDET 382 Query: 408 -VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A + RA + K DL T +V EF ELQG +G+ YA L E+ + AI EH P Sbjct: 383 QKADLARASEIYKFDLMTGMVGEFDELQGIMGEHYAQLFGESAAVASAIREHYMPVSANG 442 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 N+ + +++ADKLDT++ F++ + PSGS DPY LRRA G++R + + L Sbjct: 443 NIAETAVGAVLAIADKLDTIVTFFSADLIPSGSNDPYGLRRAANGVVRTLQNKHWHVALR 502 Query: 527 QF--------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIV 571 + ++ F DR++ D D+R D++ A D +++ IV Sbjct: 503 SLLSDFVKSNGEVTENADLTAIMTFILDRVRKLALDGDVRPDIVAAGTALTPDVDVVYIV 562 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D + L + + R+ ++ + + + E+ L+ Sbjct: 563 DRTQTLANHADDDNFRDIIEALTRVSRLAMK-----QPAEGLVDESLFENQTEQALFIAT 617 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ES + L + +PI +FD +VN D+ V++NR L I + Sbjct: 618 QKINLAALESQGG---DAVYSALAELQKPIADYFDMTMVNADNELVKNNRYLQLHMIDKL 674 Query: 692 ILIVINVQKIV 702 I + ++++IV Sbjct: 675 ISALGDLEQIV 685 >gi|290953410|ref|ZP_06558031.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica URFT1] gi|295313371|ref|ZP_06803980.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica URFT1] Length = 620 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 188/653 (28%), Positives = 330/653 (50%), Gaps = 65/653 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVA--TPKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P K MRW + S+ ++RP+ +L + + + Sbjct: 124 SGQATVNLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLALYGND-----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSK-KPELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRL 627 +F++S K + + S KR+ I++ K + + + E E L Sbjct: 571 TKFYNSDKAQSLIASNKRVANIIS---KNATDKDYYYNIELAKAAANEYELAL 620 >gi|212696011|ref|ZP_03304139.1| hypothetical protein ANHYDRO_00547 [Anaerococcus hydrogenalis DSM 7454] gi|212676998|gb|EEB36605.1| hypothetical protein ANHYDRO_00547 [Anaerococcus hydrogenalis DSM 7454] Length = 689 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 214/731 (29%), Positives = 362/731 (49%), Gaps = 72/731 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI EE P+ + + L L++E + + ++ TP R + L GL Sbjct: 1 MSKYLLEIGVEEFPSAYINSTKKQLEEKFKKLIEENKLSLEEIKVESTPRRFAILLDGLE 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E++ GP G KA+ GFLR I KD K + Sbjct: 61 ENKSEELVSVKGPSKKIAYDNEGNPSKALLGFLRGQKADISD--VIIKDFKGEEYVYVEK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ I++VL+ + ++ + +P+SMRW + + RP++ L +L + Sbjct: 119 KEESPSIKEVLQKNIYELVKSLNFPRSMRWG-----GRSIRFARPIRYFLSLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I+D D + I N T GHR I V +D Y+ L+E V+L + RR IL + Sbjct: 169 EILDFDAEGIKVSNTTKGHRVLGKSEIVVDKIDSYLDLLKENFVILSYKERREIILRGLN 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 R A +G + ++D+DLLEE+I +VE+ V MG D +YL LP+E+I +K +Q+ F Sbjct: 229 RYAKEIGGKFLKDEDLLEEVINIVEYPTVLMGELDHEYLKLPKEVIITPMKDHQRYFPIV 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L F+LV N ++ GN +V+ ARLEDA F+ D N Sbjct: 289 DDNENLMPYFLLVRNGD-DYAKENVISGNKKVLTARLEDAKFFYDIDNN----------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVAL- 410 K L++ + +LD + F +G+ ++ R+ L K + + DV+ Sbjct: 337 ---------KKLEEYVDQLDR--LTFFEGLGSMKQKTERLISLSKNYLEEFKLGEDVSDN 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA LSKADL T++V EF ELQG +G+ YA ENI +AIEE KPR +++P Sbjct: 386 LLRAAYLSKADLVTKMVIEFTELQGTMGRIYATNSGENIQVANAIEEAYKPRSSEDSLPK 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + I +S+ADK+DT+ + I + +GS+DP+ LRR+ +G+I II + KID+ + ++ Sbjct: 446 SVAGIVLSIADKIDTITGHYIIEDYVTGSQDPFGLRRSAIGVINIIADKKIDVDIKDLVK 505 Query: 531 D-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 D + + FF DRLK ++D+ R+DL+ A+L N+L+++ Sbjct: 506 DSLFVYTEKNELSFDYNQTLEKITEFFIDRLKNMMNDKGYRYDLVNAVLNTGESNVLSVI 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + +K L EF E+ L RI K+ ++ ++++ + L E++ Y I Sbjct: 566 EKVKALEEFVKRDDSEEILNYFTRINN-----FTKDFDL-IDVNVEKLDEGLERQYYDCI 619 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + ++ + K Y + + + S + + D ++ VDD E+++NRL+LL + Sbjct: 620 NNLES--EKYLSQKLYQKALEEIASTRQIGNDYLDNTMIMVDDEEIKNNRLALLNKLAKD 677 Query: 692 ILIVINVQKIV 702 I V N++ +V Sbjct: 678 ISRVFNIKDLV 688 >gi|312143994|ref|YP_003995440.1| glycyl-tRNA synthetase, beta subunit [Halanaerobium sp. 'sapolanicus'] gi|311904645|gb|ADQ15086.1| glycyl-tRNA synthetase, beta subunit [Halanaerobium sp. 'sapolanicus'] Length = 689 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 206/730 (28%), Positives = 344/730 (47%), Gaps = 76/730 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + + EI +EE+PA K D + + Y+ + Y TP RL L +K L Sbjct: 4 MAKNLIFEIGTEEMPAESMKKFRIDYLECAKEIFANNNLEYEAINVYSTPRRLVLSIKNL 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K E GP V G KA GF R G++ + K A Sbjct: 64 AEKQKDKRESVRGPAVNIAYDENGEATKAGQGFARGQGVEVADLVE------KDGYLYAE 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +D+L I+ ++KVP PK+MRW + +IRP+K +L + Sbjct: 118 KVEKGKASKDILADILKSIVKKVPLPKAMRWGSVK-----MEFIRPIKWLLALF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+ IDL++ ++ + GHRF + +K++ D Y L++ +++ RR I + Sbjct: 168 EEKIDLEIADVNSEVFSLGHRFLSEGKVKIKHADTYFNILQDNYIIVKEGTRRKIIKDQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +L + + V + LL+E++ LVE+ F G F ++YL LP+E++ ++ +Q+ F Sbjct: 228 EKL--NLSGKAVIKESLLDEVVDLVEYPTAFKGQFSEEYLELPDEVLITAMEKHQRYFPV 285 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + G L FI V + + D A ++ GN V+ RL+DA F+ DQ S Sbjct: 286 K-ANGELKAEFIGVRDGGS-DYLAEVIAGNEMVLKGRLDDAQFFFAEDQKYGFINRSE-- 341 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 D+ D+VF +G+ ++V ++ + ++A ++ Sbjct: 342 --------------------DIKDIVFQQDLGSVNDKVQKLEEITSELADKLNYRADKKE 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA LSK DL TE+V EF LQG +G+EYA+L E +AI EH PR +++P Sbjct: 382 KAVRAAELSKNDLATEMVNEFANLQGIMGREYALLAGEAEETAEAIYEHYLPRYAGDSLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +++A+KL L + + + PSGS+DP+ALRR G++RIIL ++ I + + I Sbjct: 442 KTDSGKLLAMAEKLFNLSSHFLLGNIPSGSQDPFALRRQATGLLRIILAEELSINILEII 501 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + L F RL+ L D +IR+D+I A++ +++ + I Sbjct: 502 KMSMKIVDINKSTVNEVSLKLKEFIKQRLENLLSDLEIRYDIINAVIDVNDNDFVDIYQR 561 Query: 574 IKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L EF S + R I +N + EI+ L + EK+LY V Sbjct: 562 AEKLMEFRSQNPQLFVDLVRGLVRAKNI-----SENLDSKSEINAGLLTKDEEKQLYEVY 616 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 I++ K Y + LL + E I+ F D V+V V+D E++ NRLS+L I ++ Sbjct: 617 QKNQPLIKDHFAKKEYKKGFYLLVELKEDIDKFLDNVMVMVEDEELKKNRLSILSEISDL 676 Query: 692 ILIVINVQKI 701 + VIN+++I Sbjct: 677 MREVINIEEI 686 >gi|162456312|ref|YP_001618679.1| glycyl-tRNA synthetase beta chain [Sorangium cellulosum 'So ce 56'] gi|161166894|emb|CAN98199.1| glycyl-tRNA synthetase beta chain [Sorangium cellulosum 'So ce 56'] Length = 699 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 184/728 (25%), Positives = 315/728 (43%), Gaps = 70/728 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D LLEI EE+P+ A L + L E + + +R TP RL L + G++ Sbjct: 6 SDLLLEIGVEELPSSFVEAALRALPDLATKRLAELRLRHGAVRALGTPRRLALLVSGVAA 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ EE GP V GA KA + F + G +++ KG+ R+ Sbjct: 66 RQPDLEEEVTGPPVKAAFKDGAPTKAAEAFAQKLGCTVADLRRVE--GPKGEYLAGTRRE 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R ++L ++ + +P+ KSMRW F++ RP++ ++ + + ++ Sbjct: 124 AGRPAAELLPEVLASLVAAIPFRKSMRWGQGD-----FAFGRPIQWLVAL-----SGGEV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I +++ I G + GHRF AP I + + Y+ + A VL+DPE R + Sbjct: 174 IPVEIAGIRSGRTSRGHRFLAPGEIAIGAAKDYVEAMRAAHVLVDPEARAQLMRERLLAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A G L+ED L+ E + LVE V +GSF++++L LPE +I + +Q+ F R Sbjct: 234 ARDAGGALIEDDFLIGENLSLVEEPHVIVGSFEERFLELPERVILEVARGHQRYFGVRDA 293 Query: 296 -EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L ++ V + ++ I +GN + +RL DA F++ D Sbjct: 294 RTGALLPRYLAV--VNTAEAPEKIKRGNDNTMRSRLSDAQFFYRED-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + PL R +L +VF ++G+ + R+ L +++ L+ + A Sbjct: 338 ------VKIPLANRREKLG--GIVFQKRLGSVLAKAERVERLARELGLLLMLPEQTLVAA 389 Query: 415 I---VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 L+K DL +V EFPELQG++G+ YA+ Q + D + +H P+G + Sbjct: 390 ASGAHLAKCDLVALMVGEFPELQGEMGRAYALAQGVSPEVADVVRDHYLPKGAADATAPT 449 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE------------- 518 V++AD+LDTL+ +AI P+ + DPY LRRA LG++R +L+ Sbjct: 450 NAGALVAMADRLDTLVGCFAIGLVPTSTADPYGLRRACLGVLRTLLDRDLDLRLGAAFGA 509 Query: 519 -----NKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 +++ +++ L FF +RL+ L DR + D + A LR D L + Sbjct: 510 AYDGYAGVELNVAREELATRLGEFFSERLRGLLSDR-LPQDAVLACLRVAADRPLDLRAR 568 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ ++ S + KR I + +E L+A Sbjct: 569 VRAIDA-LSPEVRARVGEVFKRATNIADKAPAGEPVAPFGQD----VHPSETALFAGYLT 623 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 I + Y + + +F V V DD VRDNRL L++ + Sbjct: 624 LREQIASDVRSGSYDTAFRAVADFAPLLHQYFIDVFVMTDDAAVRDNRLRLMRALSETCG 683 Query: 694 IVINVQKI 701 + ++ + Sbjct: 684 SLARLELL 691 >gi|262065838|ref|ZP_06025450.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium periodonticum ATCC 33693] gi|291380421|gb|EFE87939.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium periodonticum ATCC 33693] Length = 687 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 191/727 (26%), Positives = 344/727 (47%), Gaps = 72/727 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EEIPAR +A +L LK + Y+ ++ Y TP RL L + ++ Sbjct: 3 LLFEIGMEEIPARFLSQALTELKSNFEKKLKNNRIKYEGIKTYGTPRRLVLVVDEVADMQ 62 Query: 64 PEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E +GP + G KA +GFL + + +K D KG+ Sbjct: 63 EDLDELNIGPSRERAYKDGELSKAGEGFLNAYKIDESQIEIVKND--KGEYIAFKRFAKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 E +L I+ + + +PKSM+WS + RP++ +L + +++ Sbjct: 121 EATEKLLPEILKELVLEETFPKSMKWSD-----KTIRFARPIEWLLALY-----GNNVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ I N + GHRF +V S++ Y+ + E V++D RR I ++ Sbjct: 171 FEIEGIKSSNKSKGHRFFG-KEFEVSSVEDYLNKIRENNVIIDISERRKMIEEMIDKVLL 229 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F ++G Sbjct: 230 EDE-KADIDEGLLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRYFPILDKKG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI++ N D + +GN +V++ARL DA F++ D Sbjct: 289 KLLPKFIVIRNGI--DFSQNVKEGNEKVLSARLADARFFYQED----------------- 329 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD--RAI 415 L PLDQ + +L VVF +GT +V R + + + + + D R + Sbjct: 330 ---LKIPLDQNVEKLKT--VVFQKDLGTMFNKVKRTEKIAEFLIGKLKYNYMKADILRTV 384 Query: 416 VLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L+KADL + ++ +EF +LQG +G +YA+ + E I I+EH PR + +P+ Sbjct: 385 KLAKADLVSNMIGEKEFTKLQGLMGSKYAMERGEEIGVAIGIKEHYYPRFQGDLLPSGIE 444 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 I L+D++DTL+ + + P+GSKDP+ALRR LGI+ II+ I+I L + + Sbjct: 445 GIITGLSDRIDTLVGCFGVGLIPTGSKDPFALRRTALGIVNIIINANINISLKELVNVSL 504 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + +++ F R+ D R D++ A+L + DN+ ++++ Sbjct: 505 DALQADQVLKGDRAKVEADVLDFLKQRMINVFTDMKYRKDIVLAVLDRDADNITNALEIV 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K ++E + K E L AKR+ I+ ++ + + E EK L+A Sbjct: 565 KVISEKLALNKLEALLQVAKRVTNIITK-----GNNNVTVKEKLFKEEIEKTLFAEAKKI 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++S+ Y + + S+ I+ +F+ V+V +D+ +R+NR++ L +IKN+ Sbjct: 620 AEEAEKSIKENEYADYFEKMISLVPTIDKYFETVIVMDEDKNIRENRINQLTFIKNLFDR 679 Query: 695 VINVQKI 701 + + KI Sbjct: 680 IAYLNKI 686 >gi|332522303|ref|ZP_08398555.1| glycine--tRNA ligase, beta subunit [Streptococcus porcinus str. Jelinkova 176] gi|332313567|gb|EGJ26552.1| glycine--tRNA ligase, beta subunit [Streptococcus porcinus str. Jelinkova 176] Length = 679 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 202/713 (28%), Positives = 342/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L+ + Y+ ++ + TP RL + + GL+ + +E+ GP Sbjct: 15 PAYVVTASEKQLGQKMAAFLESNRLSYERIQTFSTPRRLAVRVLGLADKQEDLVEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T I+ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDDQGNFSKAAQGFVRGKGLTTDD---IEFREIKGEEYVYVTKNEKGKSTQEVLM 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P SM W++ ++F +IRP+ ++ +L ++++++ +I Sbjct: 132 G-IPDLLASLTFPVSMHWAS-----NSFEYIRPVHTLTVLL-----DDQLLEMPFLDISS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 + GHRF I +Q+ Y DL V+ DP R+ IL+ L + + Sbjct: 181 ARYSRGHRFLG-KEIAIQNALSYEADLRSQSVIADPLERQQMILDQIKGLEKEHHIYVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ F+GSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DDDLLNEVLNLVEYPTAFLGSFDAKYLSVPEEVLVTSMKNHQRYFVVRDQSGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NDQYIENVIKGNEKVLIARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDRAIVLSKADL 422 + +A+L+ V FH KIG+ + + R V+ K +A+ + V V+RA + K DL Sbjct: 339 EDLVAKLE--HVTFHEKIGSLAQHMERTGVIAKYLAEKANLSVEETKAVERASQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGLMGEKYALLAGEDSLVATAIREHYLPSSADGVLPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ Q Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWAIPMDQLIANCYQLSFASLSY 516 Query: 529 IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 + ++ F R++ + I D+ EA+L N + ++ + L E + + + Sbjct: 517 SHQEEVMAFIAARIEKMM-GNGIPKDIREAVLASTNYQVPEMLATAQALLEASKTDQYKM 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + R+F + + + K + ++P + EK+LY ISD Sbjct: 576 AVENLSRVFNLASKVDAK-----VNVNPSLFENQEEKQLYQAISDLQLE-------GNAT 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ + I +FF +V +D VR+NRL+LL + V + Sbjct: 624 HKLEQLFALTDKIAVFFAHTMVMAEDIMVRNNRLALLTELMQKAGTVAQFNLL 676 >gi|4678317|emb|CAB41128.1| aminoacyl-t-RNA synthetase [Arabidopsis thaliana] Length = 1067 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 176/720 (24%), Positives = 336/720 (46%), Gaps = 67/720 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F++EI +EE+P + A+E L ++++ LL+ + + + ++ + TP RL + + +S Sbjct: 386 FIIEIGTEEMPPQDVINASEQLRVLVLELLENQRLRHGAVKAFGTPRRLVVLVDAMSSKQ 445 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E GP G KA +GF R G+ +K K + A + +P Sbjct: 446 LEEEVEVRGPPASKAFDDEGNPTKAAEGFSRRYGVPLEK--LYRKVSGKTEYVHARVTEP 503 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 RL +VL +P + K+ +PKSMRW+ S+ + RP++ ++ + + ++ Sbjct: 504 ARLALEVLSEDLPGILAKISFPKSMRWN------SSVMFSRPIRWVMAL-----HGDLVV 552 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GN++ G R A + VQ+ + Y + + + ++ E R+ IL ++ LA Sbjct: 553 PFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEERKKIILEKSNALA 612 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +V LV ++LL E+ LVE +G F + +L LPEEL+ + ++ +QK F Sbjct: 613 KSVSGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVMQKHQKYFSIIDES 672 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+N ++ + +GN V+ AR EDA F++ D Sbjct: 673 GQLLPYFIAVANGAINE--DVVKKGNEAVLRARYEDAKFFYEVDTR-------------- 716 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDR 413 K + +L ++FH K+GT ++++R++ + K+ + D L V+ Sbjct: 717 ------KRFSEFRDQLQ--GILFHEKLGTMLDKMNRLKKMVSKLCLALKIDEDLLPVVED 768 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+ +DL T +V EF L G + + YA+ + +A+ E PR + +P Sbjct: 769 AASLAMSDLATAVVTEFTALSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPKTDA 828 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------- 526 + +++ D+LD+L+ +A +PS + DP+ LRR + G+++I++E ++ Sbjct: 829 GMVLAIGDRLDSLVGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKRVLELAA 888 Query: 527 -------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + +++ F RL+ L D + +++ ++L +N + Sbjct: 889 SVQPTKVEANTVEDVYQFVTRRLEQLLVDNGVSPEVVRSVLAERGNNPCLAARTAYKTEK 948 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 K + + R +I+ K+ + +E+ E+ L++ + I Sbjct: 949 LSKGEMFPKIVEAYSRPTRIVR---GKDVGVGVEVLENAFETPQERTLWSTYTSIKDRIH 1005 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + +I + EP+E FF+ V V V++ VR NRL+LL I N+ VI++ Sbjct: 1006 TGIEIEDFTEISM---QLVEPLEDFFNNVFVMVEEERVRKNRLALLNNIANLPKGVIDLS 1062 >gi|119897077|ref|YP_932290.1| glycyl-tRNA synthetase subunit beta [Azoarcus sp. BH72] gi|229470694|sp|A1K3J8|SYGB_AZOSB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|119669490|emb|CAL93403.1| Glycyl-tRNA synthetase, beta chain [Azoarcus sp. BH72] Length = 695 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 201/715 (28%), Positives = 336/715 (46%), Gaps = 64/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFL-YLKGLSPHSPEKIEER 70 P + + E + + LK G+ R + +P R+ + + + +++ E+ Sbjct: 16 PPKALPRLGETFATKIAEGLKARGLAAADGAFRWFASPRRIAITMAGVAAEAAAKEVTEK 75 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 L P G A+ + + G+ + ++ K + P + +V Sbjct: 76 LMPVAVALDADGKPTPALLKKMEAKGIPASAVPAFERRMDGKAEALFHTAVVPGARLAEV 135 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L IV A++ +P PK MRW + ++RP+ ++ + AE +++DLD Sbjct: 136 LAAIVHDAVKALPIPKVMRWGDGDAT-----FVRPVHKLVMLHGAEVVPGRVLDLDAG-- 188 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 T GHRF + I + + D Y L E V+ D RR I A+ +G + Sbjct: 189 ---RSTRGHRFMSRGEIDIATADAYEPTLLAEGKVVPDFAERRADIERQLLAEAARLGAQ 245 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 L + DLL+E+ LVE V++G F+ ++L +P+E + LT++ NQK F G L N Sbjct: 246 LDDYTDLLDEVTALVEHPTVYVGEFEAEFLAVPQECLILTMRANQKYFPLFDAAGKLQNR 305 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSN++ D IV GN+RVV RL DA F++ D+ Sbjct: 306 FLIVSNMRMED-PVNIVTGNARVVRPRLSDARFFFETDK--------------------K 344 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 LD R+ RL +VV+H K+G+ ERV R+ L KIA + +D A RA L+KADL Sbjct: 345 HKLDSRLPRL--ANVVYHNKLGSVLERVERLEALAGKIAARLGSDEAAARRAARLAKADL 402 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 +E+V EFPELQG +G+ YA+ E DA++ H +PR + +P ++ V+LADK Sbjct: 403 VSEMVGEFPELQGIMGRYYALHDGEGAVVADAVQAHYQPRFAGDALPAGNVAAAVALADK 462 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----------------LS 526 LD L+ F+ I P+G KDP+ALRRA LG++RI++E + + L+ Sbjct: 463 LDALVGFFGIGMVPTGDKDPFALRRAALGVLRILMEAPLPLDLAALVADAAAGFKPGLLT 522 Query: 527 QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 L+ F +RLK L + I+A+L + + + + F + + Sbjct: 523 ADGFQAQLLDFMRERLKNLLRESGGEVAAIDAVLALAPTRIDLVPAKLAAVEAFRALPEA 582 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 E + KRI IL E E L +AEK L+ + + ++ + ++ Sbjct: 583 EALAAANKRIVNILKKAE----GAPGEPDVALLQEDAEKALFHRVIEIAPLVKSHVANED 638 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y +L + ++ FFD V+V ++ R NRL+LL + ++ V ++ ++ Sbjct: 639 YTDALCVLAGLRAEVDAFFDGVMVMAEEPLTRQNRLALLAQLAGLMNQVADISRL 693 >gi|329117146|ref|ZP_08245863.1| glycine--tRNA ligase, beta subunit [Streptococcus parauberis NCFD 2020] gi|326907551|gb|EGE54465.1| glycine--tRNA ligase, beta subunit [Streptococcus parauberis NCFD 2020] Length = 679 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 201/713 (28%), Positives = 339/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + + L E + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVSSSEKQFGEKMAAFLTENRLTFETIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T I+ KG+ Y+ V + + E+VL+ Sbjct: 75 SKKIALDAEGDYSKAAQGFVRGKGLTTDD---IEFCEIKGEEYVYVTKHEEGKATEEVLQ 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P SM W++ ++F +IRP+ ++ +L ++ +D++ +I Sbjct: 132 G-IPQVLASLSFPVSMHWAS-----NSFEYIRPVHTLTVLL-----DDQALDMNFLDISS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S + Y +DL V+ D R+ I++ H L +++ Sbjct: 181 GRVSRGHRFLGEET-TIASANSYEQDLARVYVIADARERQEMIVHQIHELEIKFNVKVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DEDLLNEVLNLVEFPTAFMGSFDSKYLEVPEEVLVTSMKNHQRYFVVRDQFGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NDQHIENVIKGNEKVLVARLEDGEFFWREDQKLQ--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---RAIVLSKADL 422 + + +LD V FH KIG+ + + R V+ +AQ +D RA + K DL Sbjct: 339 EDLVNKLDQ--VTFHEKIGSLRDHMKRTGVIADSLAQELDLSSQDSQVLARASQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L EN AI EH P +P +K ++LADK Sbjct: 397 LTGMVGEFDELQGLMGEKYALLAGENPEVAQAIREHYLPNSAEGELPESKAGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ +IPL Q I Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFHWNIPLDQLIANCYNLPFDSLSY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R++ + I D+ EA+L + +++ + L E + + Sbjct: 517 DNQSQVMDFISARIEKMMGA-AIPKDIKEAVLASTIFQVPQMLETAQALVEASKGSTYKS 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + R F + E++ + + + EK LY ++ H Sbjct: 576 AVENLSRAFNLAEKAEEQ-----VVVDSSLFENDQEKALYQAVNSLDL-------HGNAS 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ + I FFD +V D+ +++ NRL+LL + V + K+ Sbjct: 624 EKINQLFALNDYIVNFFDSTMVMSDNAQLKANRLALLVSLVEKAKSVASFNKL 676 >gi|209886065|ref|YP_002289922.1| glycyl-tRNA synthetase, beta subunit [Oligotropha carboxidovorans OM5] gi|209874261|gb|ACI94057.1| glycyl-tRNA synthetase, beta subunit [Oligotropha carboxidovorans OM5] Length = 805 Score = 492 bits (1266), Expect = e-136, Method: Composition-based stats. Identities = 250/542 (46%), Positives = 344/542 (63%), Gaps = 37/542 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L E++SEEIPARMQ KAA+DL ++ L EG++Y + + TP RL L + GL Sbjct: 1 MPDLLFELFSEEIPARMQAKAADDLRKMVTDKLVAEGLVYDGAKAFATPRRLALTVHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EER GP+VGA AI GFL++TGL ++ + +I+KDPKKGD Y+A++ K R Sbjct: 61 GRQPDLKEERKGPKVGAPDAAIQGFLKATGLASLDEAKIQKDPKKGDFYIALIEKTGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ I+PV ++ PWPK MRW + A +W+RPL SI+ E ++ D+ Sbjct: 121 IDVIAEILPVVVRTFPWPKQMRWGERSAKSGALTWVRPLHSIVATFGLETEDPDVVTFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP V+ + Y+ L+ A V+LDP+ RR+ IL DA +LA A G Sbjct: 181 GGIKAGQVTRGHRFMAPAEFSVRRFEDYVAKLDAAKVMLDPQRRRDTILADAKQLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE---- 296 ELVED LLEE GLVEW MGSFD +L +P+E+IR TI+ NQKCFV R + Sbjct: 241 YELVEDDALLEEAAGLVEWPVALMGSFDPAFLAIPDEVIRATIRNNQKCFVVRDPKSGAA 300 Query: 297 -----------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 G LA FIL++NI+ASDGG+AI+ GN RV+ ARL DA F++ D Sbjct: 301 SRTALGDAAPTGKLAPKFILIANIEASDGGSAIIAGNERVIRARLSDAKFFYETD----- 355 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 L L++R+ + D ++VFH K+G+Q ER++RI L ++A L+ Sbjct: 356 ---------------LKTRLEERLNKFD--NIVFHEKLGSQAERIARIERLAAELAPLVG 398 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 ADV RA L+KADL TE+V EFPE+QG +GK YA+ Q E+ S AIE+H KP+GP Sbjct: 399 ADVEKAKRAARLAKADLLTEVVGEFPEVQGLMGKYYALAQGEDASVAQAIEDHYKPQGPS 458 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + VP++ ++I V+LADK+D L FWAI+EKP+GSKDP+ALRRA LG+IR+I +N + + + Sbjct: 459 DRVPSDPVAIAVALADKIDILTGFWAIDEKPTGSKDPFALRRAALGVIRLISDNSLRLKI 518 Query: 526 SQ 527 + Sbjct: 519 IE 520 Score = 189 bits (481), Expect = 1e-45, Method: Composition-based stats. Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 2/173 (1%) Query: 531 DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKF 589 +++ FF DRLK+ L ++ RHDL++A+ D+LL +V ++ L +F + G+ Sbjct: 631 PSDVLSFFADRLKVQLREQGARHDLVDAVFALEGQDDLLMVVRRVEALGKFLDTDDGKNL 690 Query: 590 LLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L KR ILAIEEKK++ + L+ EK L I + ++ + + Sbjct: 691 LAGTKRAANILAIEEKKDKRSFTGAPDAALYKLDEEKALARAIDEVKAEAAAAVAREDFA 750 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +L + ++ FFD+V VN DD+ VR+NRL LL I+ V + +I Sbjct: 751 GAMSVLAKLRPAVDAFFDKVKVNDDDKAVRENRLKLLNEIREATRAVADFSRI 803 >gi|91206174|ref|YP_538529.1| glycyl-tRNA synthetase subunit beta [Rickettsia bellii RML369-C] gi|157826524|ref|YP_001495588.1| glycyl-tRNA synthetase subunit beta [Rickettsia bellii OSU 85-389] gi|122425155|sp|Q1RGS4|SYGB_RICBR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229558573|sp|A8GUQ4|SYGB_RICB8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|91069718|gb|ABE05440.1| Glycyl-tRNA synthetase beta chain [Rickettsia bellii RML369-C] gi|157801828|gb|ABV78551.1| glycyl-tRNA synthetase subunit beta [Rickettsia bellii OSU 85-389] Length = 658 Score = 492 bits (1266), Expect = e-136, Method: Composition-based stats. Identities = 224/700 (32%), Positives = 342/700 (48%), Gaps = 65/700 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA +Q A E I + +E + + ++ + P R+ LY L + K E G Sbjct: 13 IPAFIQKDAEEGYLSIFTKIFEENEI-FAKIQVFSGPRRITLYATHLPKVTLPKEIEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P A + AI+GF ++ + + K Y + + +R I+++L I+ AI Sbjct: 72 PSTEAPEAAINGFCKAHNVSKLELST--KLINNQLYYFYIKKVEERQIKEILPEIIVEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W + WIRPL++ILCI +E I+ L + N+T+GH Sbjct: 130 NKYSWAKSMFWGNYN-----IKWIRPLRNILCIFDSE-----ILPLQFGHLAANNVTFGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I A++ L + ED L+EE Sbjct: 180 RLTDNKKLEVTDFEDYKTKLTENYVILERLKREEIIKTSLLEQANSHNLTIKEDLRLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V G+ +K+L LP+E++ +++T+QK F R A F+ VSN Q + Sbjct: 240 VAGLSEFPVVLCGAIPQKFLELPKEVLISSMRTHQKYFCLFDRSENFAPYFLFVSNGQFA 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + +VQGN +V++ARL DAL+F+K+D +SK L+ + +L Sbjct: 300 NS-KLVVQGNEKVLSARLSDALYFYKQD--------------------ISKTLEANLEKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 V FH K+G+ E+V RI I + ID D + A L K+DL +E+V EFPE Sbjct: 339 --AAVTFHTKLGSLKEKVERI----TNICKYIDPDNKDLITAAKLCKSDLVSEMVGEFPE 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA +N N AI +H KP+G ++VP + +++ADKLD+L+ Sbjct: 393 LQGIMGYYYAKHENLNEEIAVAIRDHYKPQGLSDSVPVGN-AALLAIADKLDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-----------QNLILFFHDR 541 E P+GS DPYALRR LGIIRII+ENK+++ L+ I+ +I FF +R Sbjct: 452 GEAPTGSGDPYALRRQVLGIIRIIIENKLELNLNSLIDFSLKLYSSDKDKDLIISFFEER 511 Query: 542 LKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 K Y + LI A+L NL I + L EF G++ L + KR IL Sbjct: 512 AKFYFKNE-YDISLINAVLDL---NLANIKFKLDALKEFLEKEDGKQLLNAYKRASNIL- 566 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 ++ I + P + EK L+ V I K Y + +LL ++ PI Sbjct: 567 ----GSQNIDGAVEPSLFNTQPEKELFEVTQKLSLQIV----DKDYDKALNLLQTLLTPI 618 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD VLVN D ++ NRL +LQ + + + ++ Sbjct: 619 TSFFDNVLVNDSDPKIAKNRLLILQDVCKLFHKIAKFNRL 658 >gi|315222123|ref|ZP_07864032.1| glycyl-tRNA synthetase, beta subunit [Streptococcus anginosus F0211] gi|315188749|gb|EFU22455.1| glycyl-tRNA synthetase, beta subunit [Streptococcus anginosus F0211] Length = 679 Score = 492 bits (1266), Expect = e-136, Method: Composition-based stats. Identities = 193/701 (27%), Positives = 332/701 (47%), Gaps = 76/701 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + + + + TP RL + + LS Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMAAFLTDNRLTFDKIEMFSTPRRLAVRVSNLSE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF+R GL I KG+ Y+ V + Sbjct: 63 KQTDLTEDFKGPSKKIALDAEGNFTKAAQGFVRGKGLTVED---ITFRDIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +E+++ +V + + +P +M W + + F +IRP+ ++ +L + Sbjct: 120 QEIGKPVEELIDGVV-DVLTSLSFPVNMHWGS-----NTFEYIRPVHTLTVLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + ++L +I G + GHRF +K+QS D Y DL + V+ P R N IL+ Sbjct: 169 ESFLMNLFDIESGRTSRGHRFLGHE-VKIQSADSYEEDLRKVFVIASPMERENMILDQIK 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + + + D+DLL+E++ L+E+ F+G FD++YL +PEE++ ++K NQ+ FV R Sbjct: 228 EIEKMHNVHVEIDEDLLDEVLNLIEYPTAFIGRFDERYLDVPEEVLVTSMKVNQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L F+ V N A + +V+GN +V+ ARLEDA FW+ DQ + Sbjct: 288 NENGKLLPYFVSVRNGNA-EHLENVVKGNQKVLVARLEDAEFFWREDQRLV--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK---KIAQLIDADVAL 410 + + +L +V FH KIG+ E + R + + AQL ++ Sbjct: 338 -----------ISDLVEKLK--NVTFHEKIGSLAEHMERTAKIAALLAEKAQLSKQEMKD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 VARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENTAVAKAIREHYLPTASDGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 KI +++ADK+DT+++F+++ PSGS DPYALRRAT G++RI+ + I L + IE Sbjct: 445 TKIGAILAIADKMDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWHIALDELIE 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + D D+ D++ ++L + +V+ Sbjct: 505 EIYALQFDSLTYSNKEQVLDFFRARIEKMM-DSDVPKDIVSSVLNSSTFVVRDLVEAASL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + E + + EK L+A + + Sbjct: 564 LAEKAQEDSFKSSVESLARVFNLAEKA-----ETAGVVDESLFENAEEKALHAAVENLTL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 + L ++ I+ FFD +V +D + Sbjct: 619 -------SDDLADNIEQLFALSPVIDAFFDNTMVMAEDEAI 652 >gi|238651094|ref|YP_002916952.1| glycyl-tRNA synthetase subunit beta [Rickettsia peacockii str. Rustic] gi|259511931|sp|C4K2V3|SYGB_RICPU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238625192|gb|ACR47898.1| glycyl-tRNA synthetase subunit beta [Rickettsia peacockii str. Rustic] Length = 664 Score = 491 bits (1265), Expect = e-136, Method: Composition-based stats. Identities = 227/702 (32%), Positives = 349/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ L + K EE G Sbjct: 13 IPAFMQKNAEEGYLNIFTKIFEENEI-FAKVQVFAGPRRITLHATHLPKITLPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 72 PSIEAPETAINGFCKAHNVSKLELPT--KLISNQLYYFFVKKTEEREIKEILPEIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ + + NITYGH Sbjct: 130 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFNGE-----ILPMQFGHLTANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I LA++ L + ED L+EE Sbjct: 180 RLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELANSHELIIKEDNRLVEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 ++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + + Sbjct: 240 VVGLSEFPIVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFT 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F K+D ++K L+ R+ +L Sbjct: 300 NA-ELVIQGNEKVLSARLSDALYFCKQD--------------------IAKTLESRLGQL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHAK+G E++ RI + IA + + A L K+DL +E+V EFP+ Sbjct: 339 E--AVTFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVWEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI++H KP+G +NVP+ ++ +LADKLD+L+ Sbjct: 393 LQGIMGYYYAKHEGLNAEIAAAIKDHYKPQGLSDNVPSGNAALL-ALADKLDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-------------LILFFH 539 E P+GS DPYALRR LGIIRIILENK+++ + I +I FF Sbjct: 452 GETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y D LI A+L NL+ + L EF G++ L + KR I Sbjct: 512 ERAKFYFK-NDYDIALINAVLDL---NLIDTNFKLDELKEFLIEDAGKQLLNAYKRASNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 568 I-----GDQKITGLVDASLFSTQPEKELFEVIQKISPEIIDSIADKDYKKALNLLSSLLT 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD +LVN D ++ NRLSLLQ I + V ++ Sbjct: 623 PITSFFDNILVNDSDPKIAQNRLSLLQNICELFDKVAKFNRL 664 >gi|255322368|ref|ZP_05363514.1| glycyl-tRNA synthetase, beta subunit [Campylobacter showae RM3277] gi|255300741|gb|EET80012.1| glycyl-tRNA synthetase, beta subunit [Campylobacter showae RM3277] Length = 677 Score = 491 bits (1265), Expect = e-136, Method: Composition-based stats. Identities = 187/721 (25%), Positives = 331/721 (45%), Gaps = 66/721 (9%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M + ++EI EE+PA K +++ L + G+ Y+TP R+ Y Sbjct: 1 MSETKELIVEIGVEELPAIPFLKECGNVAAKWRETLAQNGLD-SECEFYYTPRRIAFYHP 59 Query: 58 GLSPHSPEKIEERLG-P-----RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + E +G P + GA A F + G+ + +V Sbjct: 60 KFAVRQEDGYSEFIGAPRQVAQKDGAWTPAALSFAKKCGIAESELKF--ETVGGKEVLYY 117 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + ++L ++ + + + KSMRW F +IRP++S LC+L Sbjct: 118 KKPVAGKPSAELLGDMIEKFLLGLNFGKSMRWGEGK-----FEFIRPVRSFLCLL----- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ + ++ G+ + HR + V++ Y + + V+LD RR IL++ Sbjct: 168 GDEVVKFNKFDVESGDSIFMHRSVSYDKFTVKNAKDYFAAMPKIGVILDQNARREKILSE 227 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 ++ + G+ + D+ LL+E++ + E+ +G F++++L +P E+I ++K NQ+ F Sbjct: 228 FKQIEAKNGVTVEADEALLDEVVAITEYPTALLGGFEREFLEVPSEVIITSMKENQRYFP 287 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G LAN F++VSN + + A IV+GN +V+ ARL DA+ FW+ D + LK Sbjct: 288 VF-EGGKLANRFVVVSNAISPE-PALIVKGNEKVLRARLSDAMFFWRSDLAHEFGPEKLK 345 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG-KKIAQLIDADVAL 410 + L L + + G ++ + A + AL Sbjct: 346 N----------------ITYLKELGSTYDKSVRELGVAKRLAKICADRLKACAGEGYEAL 389 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++RA++LSKADL T++V EF ELQG +G YA + EN + AI+E P G +P+ Sbjct: 390 LERAVMLSKADLTTQMVYEFTELQGVMGGYYAAAKGENENVVTAIKEQYLPSGEASALPS 449 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 S V+LA KL+TLI ++ + PSG+KDPYALRRA G+I+II +++ ++ F Sbjct: 450 TIFSSVVALAIKLETLIGLFSAGKIPSGNKDPYALRRAANGVIKIIQNENLNLDIAAFLR 509 Query: 529 --------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + + LI F DRL + D+ +++A L + ++L + I L Sbjct: 510 ETAEGYAKFDVEALIGFIFDRLYTFF---DVNPSVVKACLASKKGDVLAQCEAIDALGAI 566 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 ++ + + KR+ I+ E + E+EK+L Sbjct: 567 CAADDFRQNFSTFKRLANIIKDENF------GSVDEAKFENESEKKLNDAFKAAVK---- 616 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 Y + L + I+ FFD V++N +D VR NRL+L+ I L + ++++ Sbjct: 617 --AGGSYSERLKNLFGLKVAIDEFFDNVMINAEDELVRKNRLALVGQIYTEFLKIADIKE 674 Query: 701 I 701 I Sbjct: 675 I 675 >gi|165933877|ref|YP_001650666.1| glycyl-tRNA synthetase subunit beta [Rickettsia rickettsii str. Iowa] gi|165908964|gb|ABY73260.1| glycyl-tRNA synthetase beta chain [Rickettsia rickettsii str. Iowa] Length = 648 Score = 491 bits (1265), Expect = e-136, Method: Composition-based stats. Identities = 226/698 (32%), Positives = 347/698 (49%), Gaps = 63/698 (9%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVG 76 MQ A E I + +E + + ++ + P R+ L+ L + K EE GP + Sbjct: 1 MQKNAEEGYLNIFTKIFEENEI-FAKVQVFAGPRRITLHATHLPKITLPKEEEIKGPSIE 59 Query: 77 AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVP 136 A + AI+GF ++ + + K Y V + +R I+++L I+ AI K Sbjct: 60 APEAAINGFCKAHNVSKLELPT--KLISNQLYYFFVKKTEEREIKEILPEIIIEAINKYS 117 Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 W KSM W WIRPL++ILCI E I+ + + NITYGHR Sbjct: 118 WAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYGHRLTD 167 Query: 197 PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGL 256 ++V + Y L E V+L+ R I LA++ L + ED L+EE++GL Sbjct: 168 NKKLEVTDFEDYRNKLLENHVILERAKREEIIKTGLLELANSHELIIKEDNRLVEEVVGL 227 Query: 257 VEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGA 316 E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + ++ Sbjct: 228 SEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFTNA-E 286 Query: 317 AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLD 376 ++QGN +V++ARL DAL+F K+D ++K L+ R+ +L+ Sbjct: 287 LVIQGNEKVLSARLSDALYFCKQD--------------------IAKTLESRLGQLE--A 324 Query: 377 VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGK 436 V FHAK+G E++ RI + IA + + A L K+DL +E+VREFP+LQG Sbjct: 325 VTFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVREFPDLQGI 380 Query: 437 IGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKP 496 +G YA + N AI++H KP+G +NVP+ ++ +LADKLD+L+ E P Sbjct: 381 MGYYYAKHEGLNAEIAAAIKDHYKPQGLSDNVPSGNAALL-ALADKLDSLVGLMIAGETP 439 Query: 497 SGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-------------LILFFHDRLK 543 +GS DPYALRR LGIIRIILENK+++ + I +I FF +R K Sbjct: 440 TGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFEERAK 499 Query: 544 LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 Y D LI A+L NL+ + L EF G++ L + KR I+ Sbjct: 500 FYFK-NDYDIALINAVLDL---NLVDTNFKLDELKEFLIEDAGKQLLNAYKRASNII--- 552 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 +++I+ + + EK L+ VI I +S+ K Y + +LL S+ PI Sbjct: 553 --GDQKITGLVDVSLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSLLTPITS 610 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD VLVN D ++ NRLSLLQ I + V ++ Sbjct: 611 FFDNVLVNDSDPKIAQNRLSLLQNICELFDKVAKFNRL 648 >gi|113955371|ref|YP_730489.1| glycyl-tRNA synthetase subunit beta [Synechococcus sp. CC9311] gi|113882722|gb|ABI47680.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9311] Length = 719 Score = 491 bits (1265), Expect = e-136, Method: Composition-based stats. Identities = 180/751 (23%), Positives = 314/751 (41%), Gaps = 87/751 (11%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLEI +EE+PA H A + L +++ LK + + +R TP RL + ++ L Sbjct: 3 STFLLEIGTEELPAEFVHSALKQLQQMVVSDLKHLRLSHGQVRVSGTPRRLAVVVESLID 62 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ EER GP V G A GF + G+ +D KG A + Sbjct: 63 RQPDLEEERKGPPVKQALVDGIPGPAALGFAKRCGVDPAELQS--RDTSKGPCLFARVCT 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L +P I + + MRW + RP++ ++ + +E Sbjct: 121 PGDATTTLLIDRIPAWINGLQGRRFMRWGDGDQ-----RFSRPVRWLVSLYGSELI-PVT 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G ++ HR +++Q D Y L +A V++D R + I + Sbjct: 175 LSAATPPVQSGRLSRSHR-LRDSTVEIQHADGYCDALAKAGVMVDRSQREHLIRSALETE 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A + + L EE++ LVE +V G YL LP E+I ++++Q+ + Sbjct: 234 AQACSASVDCPESLFEELVDLVEAPRVLSGEIADCYLDLPPEVIVTVMQSHQRYVPLKRE 293 Query: 296 E-----------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L + F+LVSN A IV+GN RV+ ARL DA F D+ + Sbjct: 294 NAHHDPLALQARDALLSRFLLVSNGL-DSADATIVRGNERVLGARLADAEFFLNVDRKSA 352 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 + R LD V F +G+ +R R+ + +++ + Sbjct: 353 S--------------------EARRDALDR--VTFAKGLGSLRDRCDRMSWMTERLIDSL 390 Query: 405 DAD---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 RA K DL +++V EFPELQG IG +Y + + E+ A+ EH +P Sbjct: 391 SITSEIAIHAKRAAHFCKHDLVSQMVGEFPELQGLIGGKYLLEEGEDRQVALAVAEHYQP 450 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 RG + +P++ ++L+++L+ L++ +A ++PSGS DPYALRRA GI++I+ + Sbjct: 451 RGAGDALPSSDAGALLALSERLELLLSIYAKGDRPSGSSDPYALRRAGNGIVQILWDRGW 510 Query: 522 DIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL- 560 + L + + +L L R+ + DL++A+ Sbjct: 511 RLSLQSLLSNAARYWAELFPSFAVQPEVLVADLSLLLRQRMVSQFEEDGFPADLVQAVAG 570 Query: 561 -----RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLE 613 + + + + L++ + + +R ++ + + ++ S Sbjct: 571 EAVGDARLLSDPVDARERLALLHQLRRDERLQAVQAVVQRAAKLAEKGDLGSDQLTPSGV 630 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLV 670 + P +E L + D Y Q+ + L + +E FFD V+V Sbjct: 631 VQPDLFESASEASLLQSLDDLSP----LAQSGNYIQLAEGLQDAAKALEAFFDGPNSVMV 686 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D+ +VR NRL+LL +KN ++ I Sbjct: 687 MTDNLDVRRNRLNLLGVLKNQASVLAQFDCI 717 >gi|311104091|ref|YP_003976944.1| glycyl-tRNA synthetase subunit beta [Achromobacter xylosoxidans A8] gi|310758780|gb|ADP14229.1| glycyl-tRNA synthetase, beta subunit [Achromobacter xylosoxidans A8] Length = 712 Score = 491 bits (1265), Expect = e-136, Method: Composition-based stats. Identities = 189/728 (25%), Positives = 326/728 (44%), Gaps = 75/728 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + K + + + L+ G++ M Y TP RL ++L + +P++ E+ Sbjct: 18 PPKALQKLGQAFAEGVRATLERHGLLAAGCAMTAYSTPRRLAVHLSAVLAQAPDQPYAEK 77 Query: 71 LGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 L P G A+ L + GL+ I ++++ K D +A + Sbjct: 78 LMPVKIGLTDDGKATPALQKKLAAKGLENIDLATLERESDGKQDYLVARGTAAGAQLAAG 137 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + AI +P PK MR+ S ++RP ++ + A+ ++ + + Sbjct: 138 LQEGIDAAINGLPIPKVMRYQLADGVTS-VKFVRPAHGLVALFGAD-----VVPVSALGL 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G T GHRF + P+ D Y L E V+ E RR+ I A + Sbjct: 192 AAGRDTLGHRFMSAGPVSFADADAYAATLAEKGRVMASFEGRRDEIQRQLLDHAGRLNAT 251 Query: 243 LVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGV 298 L +D + LL+E+ LVE V++G F++++L +P+E + LT++ NQK F G Sbjct: 252 LGDDPEVAALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTMRLNQKYFPLFDPASGR 311 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L + F++VSN+ D IV+GN RVV RL DA F++ D+ Sbjct: 312 LTHRFLIVSNMHT-DNPVNIVEGNQRVVRPRLADAQFFFETDR----------------- 353 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 PL R+ +L +V+H K+GTQ ERV R+R + + +A+L+ DV+ DRA +L+ Sbjct: 354 ---KTPLAARVEQLG--SIVYHNKLGTQLERVERVRAIARGVAELLGGDVSAADRAAMLA 408 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA E S A+ + R + + Sbjct: 409 KADLGSNMVGEFPELQGVMGAYYAAGDGEPDSVVQALRTQYRNRYDAPVTADTLTAAVLF 468 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGII---RIILENKI-------DIPLSQF 528 +A++++T++ WAI P+G +DP+ LRRA LG+I + + L Sbjct: 469 VAERVETMVGIWAIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKISEAGPLSLDGL 528 Query: 529 IED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 +E + F ++R + L + R + +EA++ L + + Sbjct: 529 LELAAGTFPAGKIPADTLPEVRAFIYERYRNQLINEFDR-NAVEAVVALTP-PLHQVAER 586 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ F + + KRI +L E + ++ L+ AEK L A +S Sbjct: 587 VRAAAAFAQLPEAASLAAANKRIGNLLKKAEGE----IGAVNDAALVEPAEKALAAAVSA 642 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + + L + EP++ FF V+V +D VR NRL+LL + ++ Sbjct: 643 LRPKAEAQLAAGDFAGSLSTLAQVREPVDAFFADVMVMAEDPAVRANRLALLSQLHGLMN 702 Query: 694 IVINVQKI 701 V ++ ++ Sbjct: 703 QVADISRL 710 >gi|306830602|ref|ZP_07463768.1| glycyl-tRNA synthetase beta subunit [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304427249|gb|EFM30355.1| glycyl-tRNA synthetase beta subunit [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 679 Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 338/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLNEKRLAFEGIQTFSTPRRLAVRVTGLADAQTDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGLTTDD---IEFREVKGEEYVYVTKHEAGKAAKEVLV 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P +M W+ + F +IRP+ ++ +L E +I Sbjct: 132 D-IPEILSAMTFPVNMHWAN-----NTFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF ++ S D Y DL V+ D + R++ I+N + A +++ Sbjct: 181 GRVSRGHRFLGHET-EIASADSYEEDLRRVFVIADAKERQDMIVNQIKDIEKAQNVQVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DDELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDQAGKLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---RAIVLSKADL 422 +A+LD +V FH KIG+ E + R +V+ +A+ A RA + K DL Sbjct: 339 ADLVAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEESKALARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + I++ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELIDNLYALSFDSLTY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R++ + + + D+ EA+L N + +++ L E +A + Sbjct: 517 EHKAEVMDFIRARVEKMM-SKSVSKDIKEAVLAGSNFVVAEMLEAADALVEASKAADYKA 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R+F + + + + EK L ++ S Sbjct: 576 AVESLSRVFNLAEKA-----PADVTVDASLFENDEEKALAQAAAELNLSGSASDK----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V VD+ V++NRL++L + V K+ Sbjct: 626 --LAQLFALSPVIDKFFDNTMVMVDNEAVKNNRLAILAELTAKASSVAAFNKL 676 >gi|222099442|ref|YP_002534010.1| Glycyl-tRNA synthetase beta subunit [Thermotoga neapolitana DSM 4359] gi|254781869|sp|B9K6R1|SYGB_THENN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|221571832|gb|ACM22644.1| Glycyl-tRNA synthetase beta subunit [Thermotoga neapolitana DSM 4359] Length = 670 Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats. Identities = 174/723 (24%), Positives = 324/723 (44%), Gaps = 77/723 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA + E L LLK + ++ + R + L+GL Sbjct: 1 MRTALLEVGLEELPASEFYNILEQLETRTRELLKANRIQCDSIEVFVGSRRFGVLLRGLP 60 Query: 61 PHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 +EE+ GP GA +A++GFLR + K Sbjct: 61 EKQEGFVEEKKGPPLNVAYDSKGAPTRALEGFLRKNNATFEDIIE------KDGYVYISR 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +E+VL + + + + K MRW T + ++RP+ I+ +L + Sbjct: 115 KIEGKAVEEVLPEVFEDLVMGMSFKKPMRWGTGE-----YEYVRPVHWIVAML-----DD 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++++L L + +++YG R+H+ +K+ + + Y L+ V+ E R+ ++L Sbjct: 165 RVLNLTLFGLRASHVSYGKRYHS-GALKINTPEEYYEVLKSGYVMASHEERKKSVLKQLE 223 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 G+++ D+ L+ EI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ F Sbjct: 224 DFERTYGMKVERDEALIAEIVAMTEYPRILVGQFDQKYLELPEEIIVTAVKHHQRAF-VA 282 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L N F+ + +V+G RV+ ARLEDA +++ +D Sbjct: 283 HKDG-LTNFFVAFQDGP--QSSENVVKGYERVINARLEDARYYFHKD------------- 326 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L L + RL +VF ++GT ++V RI + +KI + ++ Sbjct: 327 -------LEMSLGEMNERLK--GIVFQERLGTLYDKVERIVKISRKICGELKFPEDFTEK 377 Query: 414 A---IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 L KAD+ +++V EFPELQG +G+ YA+ + + AIE+H P Sbjct: 378 VLKVASLCKADIASKVVYEFPELQGVMGRIYALKEGMDEELAFAIEDHY------SENPE 431 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I + +AD+LDT++ +AI P+ SKDPY L+ + RI+ +N+ D+ L + + Sbjct: 432 TVIGSVLGMADRLDTIVGNFAIGNIPTSSKDPYGLKGKADTVFRIVRKNEWDVSLEELLN 491 Query: 531 D----------QNLILFFHDRLKLY-LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +L FF R + +++ + +D+ A+ L + L Sbjct: 492 FAASLVGFHLSNDLEEFFSSRFYQFLINEIGVSYDVARAVNHLW-KKPLRGTLAAEALQN 550 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + + +R+ I + S E E EKRL + + Sbjct: 551 ISERPEFQDLFVGFERVHNITKKHD------SREFDGALFEKEEEKRLMNKFFEVKEKVL 604 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++++ Y + L + I+ +FD V V V+ ++R NRL L+ I ++ +++ ++ Sbjct: 605 KALERLNYEEALQYLIELKPYIDEYFDNVFVMVNRDDLRMNRLGFLKNIDDLFMMIGDMS 664 Query: 700 KIV 702 +V Sbjct: 665 HLV 667 >gi|118594506|ref|ZP_01551853.1| glycyl-tRNA synthetase, beta subunit [Methylophilales bacterium HTCC2181] gi|118440284|gb|EAV46911.1| glycyl-tRNA synthetase, beta subunit [Methylophilales bacterium HTCC2181] Length = 697 Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats. Identities = 194/723 (26%), Positives = 341/723 (47%), Gaps = 56/723 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ-NMRQYWTPHRLFLYLKGLSP 61 + L+EI +EE+P Q E + + + E +I + +P R+ + +K + Sbjct: 5 NLLIEIVTEELPPLSQKDLGEAFAKNIAQSILELKLIESLEYETFSSPRRIGVLVKQVLL 64 Query: 62 HSP-EKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV-YLAVL 113 EK + +L P A+ L S G + ++ +KG Sbjct: 65 SGDNEKRKIKLMPAKVGFREENKPSDALIKKLDSMGEGLSAIKNLELVEEKGQFNIYLEK 124 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + + L I+ ++ +P K M + + +++RP+K+IL + + Sbjct: 125 SFDGKSLYEELPQIINNSLAHLPIKKLMSYQLNDG-WTTVNFVRPIKNILAVY-----GD 178 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPI-KVQSLDHY-IRDLEEAMVLLDPECRRNAILND 231 K++DL+ + TYGHRF + H + + Y L E V+ R+ I D Sbjct: 179 KLVDLECMGLKSVMHTYGHRFESKHDVLAIHDASLYEKVLLTEGRVIASFSKRKEKIKTD 238 Query: 232 AHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + + + D LLEE+ LVE + +G F+ +YL +P+E + LT+++NQK Sbjct: 239 LNEAVKKINNKFRAITDDKLLEEVTSLVEMPNILIGEFENQYLEVPQECLILTMQSNQKY 298 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + L N F++VSNI + I++GN +V+ RL DA F+K+D Sbjct: 299 FPILNDQDELTNYFVIVSNINPKNSTN-IIEGNEKVIRPRLADAEFFYKKD--------- 348 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-DV 408 ++ L + L + +H K+GTQ +R R+ + K I++ ++ +V Sbjct: 349 -----------MAYTLKKYSENLR--SITYHNKLGTQHDRALRVASIMKFISKKLNVKNV 395 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + + +KADL +V EFPELQG IG+ YA+ + DAIE+H P+ + Sbjct: 396 TNFENLALHAKADLLCLMVGEFPELQGVIGRYYALNEGHANDFADAIEDHYNPKFSGGKL 455 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P ++ +++ADK++TL++ ++I EKP+G KDP+ALRR +G+IRI+ E I + L + Sbjct: 456 PREQMGDMLAIADKIETLMSLFSIGEKPTGVKDPFALRRNAIGLIRILAEKNIPLELDEL 515 Query: 529 IED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++ L F DRL YL D+ +EA+ L I++ + Sbjct: 516 LKTFYPNSDLKSLNELTAFIQDRLINYLKDKGFTPQQVEAVAGEMPKTLDNILERANAVK 575 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ IL N E I P L+ EK L+ +++ I Sbjct: 576 LFSQLNQSEDLASANKRVVNILKKYNSNNME---TIDPSLLIENEEKFLFKSLNETSKKI 632 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +E + K Y + +L ++ EPI++FF++++VN DD ++ NR +LL + + V N+ Sbjct: 633 REFVKAKDYDRALSILINLKEPIDLFFEKIMVNADDDAIKKNRHNLLIQLYKEMNCVANI 692 Query: 699 QKI 701 K+ Sbjct: 693 SKL 695 >gi|325977583|ref|YP_004287299.1| glycyl-tRNA synthetase subunit beta [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177511|emb|CBZ47555.1| glycyl-tRNA synthetase subunit beta [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 679 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 337/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLNEKRLAFEGIQTFSTPRRLAVRVTGLADAQTDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGLTTDD---IEFREVKGEEYVYVTKHEAGKAAKEVLV 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P +M W+ + F +IRP+ ++ +L E +I Sbjct: 132 D-IPEILSAMTFPVNMHWAN-----NTFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF ++ S D Y DL V+ D + R++ I+N + A +++ Sbjct: 181 GRVSRGHRFLGHET-EIVSADSYEEDLRRVFVIADAKERQDMIVNQIKDIEKAQNVQVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DDELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDQAGKLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---RAIVLSKADL 422 +A+LD +V FH KIG+ E + R +V+ +A+ A RA + K DL Sbjct: 339 ADLVAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEESKALARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + I++ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELIDNLYALSFDSLTY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R++ + + + D+ EA+L N + +++ L E +A + Sbjct: 517 EHKAEVMDFIRARVEKMM-SKSVSKDIKEAVLAGSNFVVAEMLEAADALVEASKAADYKA 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R+F + + + EK L ++ S Sbjct: 576 AVESLSRVFNLAEKA-----PADVTVDASLFENNEEKALAQAAAELNLSGSASDK----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V VD+ V++NRL++L + V K+ Sbjct: 626 --LAQLFALSPVIDKFFDNTMVMVDNEAVKNNRLAILAELTAKASSVAAFNKL 676 >gi|238028590|ref|YP_002912821.1| glycyl-tRNA synthetase subunit beta [Burkholderia glumae BGR1] gi|237877784|gb|ACR30117.1| Glycyl-tRNA synthetase beta subunit [Burkholderia glumae BGR1] Length = 699 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 199/714 (27%), Positives = 328/714 (45%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + L L + +Y TP RL + + + +P++ E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLTDGAPVFERYATPRRLAVVITNVRAVAPQRQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G ++ +++ K + + P + D Sbjct: 79 VLPVSVALDAAGQPTAPLAKKLAALGHPNLTVADLERAQDGKAEAFFVNYSAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+K + + ++ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVKRLTVL-----HGTHVVPVSAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + + S Y L E V+ RR +I A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIGSASRYADTLREKGRVIAHFADRRESIRTALAEHAG--GDA 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEWLLDEVNALVEWPVVYACKFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ + A I+ GN RVV RL DA F++ D+ Sbjct: 310 FLIVSNIETA-TPAEIIDGNERVVRPRLADAKFFFETDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 PL R+ RL +VV+H K+G+Q RV RI L ++IA + AD AL RA L+KADL Sbjct: 349 TPLVDRVPRL--ANVVYHNKLGSQLARVERIESLAEQIAPAVGADAALARRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +P +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADEVAVACTEHYQPRFSGDALPAAPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+T++ W I P+G KDP+ALRR LG++R+++E ++ + L Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLVEKQLPLDLRGLLRTTYASFAGIAGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L E + ++ + + EF A+ Sbjct: 527 AESTDAIYAFFLDRLRGLLRERGYSTGEIDAVLGLEPSRVDDLIARLDAVREFTRLAEAG 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K E+ L AE+ L A ++ +Q + + Y Sbjct: 587 ALAAANKRISNILK---KSEGGAPGEVDAALLAEAAEQALAAELAQVAPRVQAQLAARDY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLGALHQQMNCVADISKL 697 >gi|269215556|ref|ZP_06159410.1| glycyl-tRNA synthetase, beta subunit [Slackia exigua ATCC 700122] gi|269131043|gb|EEZ62118.1| glycyl-tRNA synthetase, beta subunit [Slackia exigua ATCC 700122] Length = 695 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 194/734 (26%), Positives = 310/734 (42%), Gaps = 76/734 (10%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + EI +EE+PA H A E L ++ L+ + + + Y TP RL + Sbjct: 1 MANKTLAFEIGTEELPAFALHAATEKLPELVASLMDAAKIPHAGIEAYSTPRRLIAIVHD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + E GP G KA GF R G+ + ++D + A Sbjct: 61 VPEKTEASEETFRGPAAEIAFDAEGKPTKAALGFARGKGVDASALE--RRDENGVEYVYA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V P + +L ++ I + WPKS RW+ + RP++ I+ +L Sbjct: 119 VKTTPSLDVAGLLSDVLHEVITGIAWPKSQRWAAYRE-----QFSRPVRWIVALL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + ++ L G TYGHRF AP I+ D + L A V+ R +I + Sbjct: 169 GDAVVPLSFAGAESGRTTYGHRFLAPAGIEFACADDLVETLCGAFVVPSEAEREASIRSQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A GL + E++ L E+ V +G FD+ +L +P+E+I + +Q+ F Sbjct: 229 VQAVEEATGLTADLPARTMAEVVNLTEYPTVMVGGFDELFLKVPKEIIVDAMLVHQRYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G LAN F++ SN A IV GN RVVAARL DA F+ D Sbjct: 289 LFNADGTLANKFLITSNGNPKFE-ANIVDGNERVVAARLYDAKFFYDED----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ----LIDAD 407 L +PL+ + L VVF K+G+ + RI L + D + Sbjct: 337 ---------LKRPLEAYVPDLK--HVVFQEKLGSTFAKTVRIERLASFVCDSSSTATDQE 385 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A RA L KADL T V EF +QG +G YA E AI +H +PR + Sbjct: 386 KADARRAAFLCKADLVTGAVVEFTSVQGIMGSYYAKAAGETDEVARAIADHYRPRFSGDG 445 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-- 525 +P V+ ADKLDT+ +AI++ P+GS DP+ALRR+ +GI+ +L + +++ L Sbjct: 446 LPQGFAGRAVAFADKLDTICGLFAIDQAPTGSSDPFALRRSAIGIVG-LLNDGLEVSLGA 504 Query: 526 ----------------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ FF R K+ L D + D I+A+L T Sbjct: 505 AVDAALASYETDGLVFDRIEVAEAVVDFFVTRTKVILRDEGVSADAIDAVLAARVVEPAT 564 Query: 570 IVDLIKHL--NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 I + L E ++ R + ++ + +AE+ L Sbjct: 565 IAKRARALDMQRAAEPEAFEDLAIAFARANNL------RDAAAGDVCDEEAF-NDAERTL 617 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 +A + + ++D + Q L ++ PI+ FF V+V +D +VR NR+ LL Sbjct: 618 FAATARARADVAAALDDDDFAQALTSLAALRRPIDAFFTDVMVMDEDPDVRRNRIRLLNR 677 Query: 688 IKNIILIVINVQKI 701 + V + + Sbjct: 678 FVGVFSDVADFGLL 691 >gi|15675548|ref|NP_269722.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes M1 GAS] gi|71911197|ref|YP_282747.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS5005] gi|25009338|sp|Q99YI4|SYGB_STRP1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|13622750|gb|AAK34443.1| putative glycyl-tRNA synthetase (beta subunit) [Streptococcus pyogenes M1 GAS] gi|71853979|gb|AAZ52002.1| glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS5005] Length = 679 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 339/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NDQAIENVIKGNEKVLVARLEDGEFFWREDQKLQ--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV---DRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A+ + V DRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LA K Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALAAK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EAIL + ++ + L + + + Sbjct: 517 ANKADVMNFIRARVDKMM-GKAAPKDIREAILASSTFVVPEMLAAAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAA------- 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + + ++ I FFD +V D+ +++NRL++L + + ++ ++ Sbjct: 624 QQLEQVFALSPVINDFFDNTMVMAGDQALKNNRLAILSDLVSKAKTIVAFNQL 676 >gi|126643134|ref|YP_001086118.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii ATCC 17978] Length = 595 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 180/630 (28%), Positives = 316/630 (50%), Gaps = 55/630 (8%) Query: 86 LRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWST 145 +R G+ + K + + + ++ +L I+ A+ +P K MR + Sbjct: 1 MRGQGITVDQLSTFQ--AGKVEKVCYLKDVKGQSLDALLPQILQTALDNLPIAKRMRSAA 58 Query: 146 THSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSL 205 + + ++RP+K ++ + +++I+ +++ GN+TYGHRFHAP + + Sbjct: 59 SRT-----EFVRPVKWVVLL-----KDDQVIEATIQDHKAGNVTYGHRFHAPEAVTLAHA 108 Query: 206 DHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMG 265 + Y+ LE+A V+ + E R+ I +LA V + DLL+E+ LVEW Sbjct: 109 NDYLAALEKAYVVANFEKRQATIQEQVKKLADEVNATAIVPADLLDEVTSLVEWPVALRA 168 Query: 266 SFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRV 325 +F+++YL +P+E + T++ NQK F EG L FI VSNI++ D I++GN +V Sbjct: 169 TFEERYLAVPQEALITTMQDNQKYFCLINAEGKLQPYFITVSNIESKDSTQ-IIEGNEKV 227 Query: 326 VAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGT 385 V RL DA F+ +DQ +PL R +L ++VF A++GT Sbjct: 228 VRPRLSDAEFFFLQDQ--------------------KQPLASRKEKL--ANMVFQAQLGT 265 Query: 386 QGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQ 445 ++ +RI L ++ + A+ A ++A +L+K DL +E+V EFPELQG G YA ++ Sbjct: 266 LWDKSTRIAKLAVALSSITGANPADAEKAALLAKCDLTSELVGEFPELQGIAGTYYARIE 325 Query: 446 NENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYAL 505 EN +A+ E P+ + +P K T++LAD+LDTL+ + I + P+GSKDP+AL Sbjct: 326 GENTEVSEALGEQYLPKFAGDVLPKTKTGTTIALADRLDTLVGIFGIGQAPTGSKDPFAL 385 Query: 506 RRATLGIIRIILENKIDIPLSQF----------------IEDQNLILFFHDRLKLYLHDR 549 RR+ +GI+R+I+EN++D+ + + + + F R + D+ Sbjct: 386 RRSAIGILRLIIENELDVTIEELVNLALQGYGDIVKDHDKTRADAVAFLEGRYRAKYEDQ 445 Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 + D+++A+ + L + +N F + + + KR+ ILA E Sbjct: 446 GVAVDVLQAVQALAPKSPLDFDKRVNAVNHFRTLPEAAALAAANKRVANILAKEAAPE-- 503 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 + L+ +AEK L+A + ++ + K Y L ++ PI+ FFD V+ Sbjct: 504 --GSVIEANLVEDAEKALFAELQAVTPVVEPLLAAKDYTAALSKLAALRAPIDAFFDGVM 561 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 V DD +++ NRL LL ++N+ V +V Sbjct: 562 VMADDADLKANRLRLLAQLRNLFTAVADVS 591 >gi|288904608|ref|YP_003429829.1| glycyl-tRNA synthetase (beta subunit) [Streptococcus gallolyticus UCN34] gi|288731333|emb|CBI12884.1| glycyl-tRNA synthetase (beta subunit) [Streptococcus gallolyticus UCN34] Length = 679 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 338/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLNEKRLAFEGIQTFSTPRRLAVRVTGLADAQTDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGLTTDD---IEFREVKGEEYVYVTKHEAGKAAKEVLV 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P +M W+ + F +IRP+ ++ +L E +I Sbjct: 132 D-IPEILSAMTFPVNMHWAN-----NTFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF ++ S D Y DL + V+ D + R++ I+N + A +++ Sbjct: 181 GRVSRGHRFLGHET-EIASADSYEEDLRKVFVIADAKERQDMIVNQIKDIEKAQNVQVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DDELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDQAGKLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---RAIVLSKADL 422 +A+LD +V FH KIG+ E + R +V+ +A+ A RA + K DL Sbjct: 339 ADLVAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEESKALARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + I++ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELIDNLYALSFDSLTY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R++ + + + D+ EA+L N + +++ L E +A + Sbjct: 517 EHKAEVMDFIRARVEKMM-SKSVSKDIKEAVLAGSNFVVAEMLEAADALVEASKAADYKA 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R+F + + + EK L ++ S Sbjct: 576 AVESLSRVFNLAEKA-----PADVTVDASLFENNEEKALAQAAAELNLSGSASDK----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V VD+ V++NRL++L + V K+ Sbjct: 626 --LAQLFALSPVIDKFFDNTMVMVDNEAVKNNRLAILAELTAKASSVAAFNKL 676 >gi|51474017|ref|YP_067774.1| glycyl-tRNA synthetase subunit beta [Rickettsia typhi str. Wilmington] gi|81826275|sp|Q68VR4|SYGB_RICTY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|51460329|gb|AAU04292.1| Glycyl translase [Rickettsia typhi str. Wilmington] Length = 664 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 229/702 (32%), Positives = 344/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + KE + + ++ + P R+ L+ L K EE G Sbjct: 13 IPAFMQKNAEEAYLNIFTKIFKENEI-FAQVQVFVGPRRITLHATNLPKVILPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF + + K K Y V + R ++++L I+ AI Sbjct: 72 PSIEAPEIAINGFCKVHNVNKFDLST--KLINKKLYYFFVKKTQAREMKEILPKIIIDAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ L + NITYGH Sbjct: 130 NKYSWIKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLQFGHLSANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R +++ ++Y L E V+L+ R I LA+A L + +D L+EE Sbjct: 180 RLTNNKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDARLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LPEE+I ++ +QK F + G A F+ V N + Sbjct: 240 VTGLNEFPVVLLGKIPQKFLELPEEVIISVMRKHQKYFCLFDKTGNFAPYFLFVINGRF- 298 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 I+QGN +V++ARL DAL+F+K D ++K L+ R ++L Sbjct: 299 VNIELILQGNEKVLSARLADALYFYKHD--------------------IAKTLESRFSKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V+FHAK+G+ E+V RI + + IA D + A L K+DL +++V EFP+ Sbjct: 339 E--SVIFHAKLGSLKEKVDRITDICRYIAP----DNIDLIMAARLCKSDLVSDMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +NVP+ + ++LADKLD+L+ + Sbjct: 393 LQGIMGYYYAKHEGLNEEVAKAIRDHYKPQGLNDNVPSGNAT-LLALADKLDSLVGLIIV 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------IEDQNLILFFH 539 E P+GS DPYALRR LGIIRII+ENK++I ++I FF Sbjct: 452 GETPNGSGDPYALRRQALGIIRIIIENKLEINFINLINFAVSLYKVPTNTHLDSVISFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y D LI A+L NL+ + L EF G++ L + KR+ I Sbjct: 512 ERAKFYFK-NDYDIALINAVLDL---NLVDTKFKLDTLKEFLVQDVGKQLLNAYKRVSNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + N++I+ + + EK L+ VI I + +K Y + +LL S+ + Sbjct: 568 I-----GNQKITGLVDVSLFSTQYEKELFEVIQIISQQIIAIIANKDYKKALNLLSSLLK 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLL + V+ ++ Sbjct: 623 PITSFFDNVLVNDSDPKIAQNRLSLLHNTCEVFDKVVKFCRL 664 >gi|148269843|ref|YP_001244303.1| glycine--tRNA ligase [Thermotoga petrophila RKU-1] gi|166227930|sp|A5IKK4|SYGB_THEP1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|147735387|gb|ABQ46727.1| Glycine--tRNA ligase [Thermotoga petrophila RKU-1] Length = 672 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 178/723 (24%), Positives = 325/723 (44%), Gaps = 77/723 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA H + L LLK + + + R + LK L Sbjct: 1 MRTALLEVGLEELPASEFHSILKQLEERSTELLKAYRISSGSAEVFVGSRRFGVILKNLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EE+ GP + G KA++GFLR+ ++ + Sbjct: 61 ERQEDFTEEKKGPPLNVAYDENGKPTKALEGFLRNNNAS------LENVVHREGYIYLSR 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +E+VL + + + + K MRW + +IRP+ I+ + Sbjct: 115 VVEGKPVEEVLPDLFRDLVLGLNFRKPMRWGSGEH-----EYIRPVHWIVAM-----VDG 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++DL++ + I+YG R+HA IK+ + Y L++ V+ R+ +L Sbjct: 165 RVLDLEIFGLRSSRISYGKRYHA-GSIKIPDPERYYESLKKGFVISSHLERKKFVLEQID 223 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 G+++ D++L+EEI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ F+ Sbjct: 224 EFEKRSGMKIERDEELIEEIVAITEYPRIVVGQFDRKYLELPEEIIVTAVKHHQRSFIAH 283 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L N F+ + +V+G RV+ ARLEDA +++++D Sbjct: 284 KET--LTNTFVAFQDGP--QPPENVVKGYERVINARLEDARYYFQKD------------- 326 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L PL++ +L ++VF K+GT ++V RI+ + +++ + + + + Sbjct: 327 -------LETPLEKMNEKLK--EIVFQEKLGTLYDKVERIKKISERLCEDLKLPESFTQK 377 Query: 414 ---AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 A + KAD+ +++V EFPELQG +G+ YA+ + N AIE+H P Sbjct: 378 VLEAASICKADIASKVVYEFPELQGVMGRIYALREGINEEIATAIEDHY------SEEPQ 431 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I + +AD++DT++ +AI P+ SKDPY L+ I RII +N+ DI L + + Sbjct: 432 TVIGSILGIADRIDTIVGNFAIGNVPTSSKDPYGLKNKADAIFRIIRKNEWDISLEELLT 491 Query: 531 D----------QNLILFFHDRLKLY-LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + L FF R + +++ I D+ A+ L I+ + L E Sbjct: 492 FASSLVGYRLSEELETFFAGRFYQFLVNELGISFDVARAVNHLWKRPLRGILS-AEALQE 550 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + + +R+ I + S+ E EK+L + + Sbjct: 551 ISEKPEFQDLFVGFERVHNITKNHD------SVRFDGALFEKEEEKKLMNKFYEVKEKVL 604 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++++ Y + L + I+ +FD V V V ++R NRL L+ I + ++V ++ Sbjct: 605 KALERLNYREALQYLIELKPYIDEYFDNVFVMVKRDDLRVNRLGFLKNIDELFMMVGDMT 664 Query: 700 KIV 702 +V Sbjct: 665 YLV 667 >gi|281412274|ref|YP_003346353.1| glycyl-tRNA synthetase, beta subunit [Thermotoga naphthophila RKU-10] gi|281373377|gb|ADA66939.1| glycyl-tRNA synthetase, beta subunit [Thermotoga naphthophila RKU-10] Length = 672 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 177/723 (24%), Positives = 325/723 (44%), Gaps = 77/723 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA H + L LLK + + + R + LK L Sbjct: 1 MRTALLEVGLEELPASEFHSILKQLEERSTELLKAYRISSGSAEVFVGSRRFGVILKNLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EE+ GP + G KA++GFLR+ ++ + Sbjct: 61 ERQEDFTEEKKGPPLNVAYDENGKPTKALEGFLRNNNAS------LENVVHREGYIYLSR 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +E+VL + + + + K MRW + +IRP+ I+ + Sbjct: 115 VVEGKPVEEVLPDLFRDLVLGLNFRKPMRWGSGEH-----EYIRPVHWIVAM-----VDG 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++DL++ + I+YG R+HA I++ + Y L++ V+ R+ +L Sbjct: 165 RVLDLEIFGLRSSRISYGKRYHA-GSIEIPDPERYYESLKKGFVISSHLERKKFVLEQID 223 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 G+++ D++L+EEI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ F+ Sbjct: 224 EFEKRSGMKIERDEELIEEIVAITEYPRIVVGQFDRKYLELPEEIIVTAVKHHQRSFIAH 283 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L N F+ + +V+G RV+ ARLEDA +++++D Sbjct: 284 KET--LTNTFVAFQDGP--QPPENVVKGYERVINARLEDARYYFQKD------------- 326 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L PL++ +L ++VF K+GT ++V RI+ + +++ + + + + Sbjct: 327 -------LETPLEKMNEKLK--EIVFQEKLGTLYDKVERIKKISERLCEDLKLPESFTQK 377 Query: 414 ---AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 A + KAD+ +++V EFPELQG +G+ YA+ + N AIE+H P Sbjct: 378 VLEAASICKADIASKVVYEFPELQGVMGRIYALREGINEEIATAIEDHY------SEEPQ 431 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I + +AD++DT++ +AI P+ SKDPY L+ I RII +N+ DI L + + Sbjct: 432 TVIGSILGIADRIDTIVGNFAIGNVPTSSKDPYGLKNKADAIFRIIRKNEWDISLEELLT 491 Query: 531 D----------QNLILFFHDRLKLY-LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + L FF R + +++ I D+ A+ L I+ + L E Sbjct: 492 FASSLVGYRLSEELETFFAGRFYQFLVNELGISFDVARAVNHLWKRPLRGILS-AEALQE 550 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + + +R+ I + S+ E EK+L + + Sbjct: 551 ISEKPEFQDLFVGFERVHNITKNHD------SVRFDGALFEKEEEKKLMNKFYEVKEKVL 604 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++++ Y + L + I+ +FD V V V ++R NRL L+ I + ++V ++ Sbjct: 605 KALERLNYREALQYLIELKPYIDEYFDNVFVMVKRDDLRVNRLGFLKNIDELFMMVGDMT 664 Query: 700 KIV 702 +V Sbjct: 665 YLV 667 >gi|313679910|ref|YP_004057649.1| glycyl-tRNA synthetase, beta subunit [Oceanithermus profundus DSM 14977] gi|313152625|gb|ADR36476.1| glycyl-tRNA synthetase, beta subunit [Oceanithermus profundus DSM 14977] Length = 697 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 185/730 (25%), Positives = 312/730 (42%), Gaps = 89/730 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI +EE+PA +A DL + L + ++ + Y TP RL L ++GL Sbjct: 2 NLLFEIGTEELPAAYVPRALADLERLAAERLSAARLDFEAIETYATPRRLALVVRGLPEA 61 Query: 63 SPEKIEERLGPR------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 S E R GP G A GF R G++ K A + Sbjct: 62 SARVEEARRGPPEKAAFKDGKPTPAAAGFARKAGVEVADL------TVKDGYVWARVVHE 115 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 +L ++ ++ +P PK M W P ++RP++ ++ L E ++ Sbjct: 116 GEPTARILPELLAGLVRDLPAPKKMIWGAGDGP-----FVRPVRWLVARLDGE-----VL 165 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 +++ + G + GHRF P ++V + Y L +A V+ D RR ++ + LA Sbjct: 166 PVEVFNVSAGRTSRGHRFLGPDVVEV-DAETYRDALYDAHVVADVAQRRERVVLETATLA 224 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + G E V +DL+EE+ LVEW MGSF ++YL LP+E++ + +Q+ F R Sbjct: 225 LSEGYEAVLPEDLVEEVTHLVEWPVAVMGSFSQRYLELPDEVLATVMIQHQRFFPVRVPG 284 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L N FI VS Q D + + G +V+ R+ DA FW D Sbjct: 285 ERLTNRFIGVSGHQPPD-LSVVRAGYEQVLEGRIYDAYFFWTED---------------- 327 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 L PL + +L + F +GT ++ R+R +K+ + D ++ A Sbjct: 328 ----LKTPLTEHHKKL--AGINFQRGLGTMADKAERVRQAAEKLGGRLGLDEEVLREAAA 381 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L KADL T++V EFPEL+G + + Y Q + A+E+ ++P GP ++P Sbjct: 382 LYKADLPTQMVYEFPELEGVMARAYGEKQGLDPRVARALEDAVRPTGPEASLPETPEGAL 441 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------- 528 ++ D+ DTL+ F+ + +KPSGS DPY LRRA G++RI+ +PL Sbjct: 442 LAALDRADTLVGFFHLGKKPSGSADPYGLRRAAAGLVRILGRTGWALPLEDVLEAAAEAY 501 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 Q F +RL+ L + + + A + ++ + + + E Sbjct: 502 RARGLEVSPEAVQAARAFAEERLESLLTEAGLPTLAVRA--AQKAPSVYGKMLRARLVYE 559 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + KR + + E + E P+ E E RL ++ + Sbjct: 560 LMQRPEFAELTRLYKRAANLASQSES-----TREPDPELFETEEEARLLESLAPTRRAVG 614 Query: 640 ESMDHKR-------------------YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 E ++ + + ++ ++ F D VLV VDD VR+N Sbjct: 615 ELLERGAELLPPWDPAAPLPNVDLAPLTEPLAQILALAGALDPFMDHVLVMVDDAAVREN 674 Query: 681 RLSLLQYIKN 690 RL+LL+ +++ Sbjct: 675 RLALLRGVRD 684 >gi|33240281|ref|NP_875223.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237808|gb|AAP99875.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 721 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 185/752 (24%), Positives = 329/752 (43%), Gaps = 84/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI +EE+PA A L ++ LK+ + Y+ +R TP R+F+ + L+ Sbjct: 1 MSNFLLEIGTEELPADFARLAISQLEELVQNDLKQNRIQYELIRCSSTPRRIFVIVNNLA 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 S + +EER GP G A +GF + GL + D +I+ + KG + Sbjct: 61 SSSDDFVEERKGPPATKAFKNGCPTPAAEGFAKRYGL-LVEDLEIR-ETVKGPFVFGKVV 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +D+L ++P I + + MRW + S + RP++ ++ +L + K K Sbjct: 119 EKGGPSKDLLVDLIPNWINSIQGKRFMRWGSGDS-----RFSRPVRWLVALLDDNEIKVK 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + EI G ++ GHR + I ++S Y L A V++D E R + I + + Sbjct: 174 -LPDTDPEILSGRLSRGHRLVSNE-ILIESSGEYFEILRGAGVIVDREERLDLIKSLVEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + V LL E+ LVE + G F++ +L LP E++ ++ +Q+ Sbjct: 232 SSLEVNATADLTSKLLNELTDLVELPYLIRGEFNESFLELPAEVLSTVMQVHQRYIPLYK 291 Query: 295 RE-----------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 + G+L F+ + N I +GN RV+ AR DA F D+ Sbjct: 292 NDDEVDPLALEAKGILTPFFLCICNGLP-QSKDLIKEGNERVLKARFADAKFFINADRGL 350 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 R +L +V F +G+ +RV RI L + + Sbjct: 351 SST--------------------SRTDQLK--NVTFADGLGSLYDRVKRIEWLAELFIKT 388 Query: 404 ID---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ + + +A L K DL + +V EFPELQG IG +Y + + E+ A+ E Sbjct: 389 VNFPEGNSNFLRKASSLCKHDLVSHMVGEFPELQGIIGAKYLLAEGESREVALAVLEQYL 448 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PRG + +P + + ++L ++++ L++ ++ E+PSGS DPYALRRA G+++II + Sbjct: 449 PRGYADKLPESFVGSALALIERIELLLSIYSKGERPSGSSDPYALRRAGNGVLQIIWNKE 508 Query: 521 IDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL 560 I L + + +L+ FFH R+ L + I D+I+A+ Sbjct: 509 WKINLLELLTISSSYWLKLFPSFKVDEENLLSDLLDFFHQRIVSLLEESSIDVDIIQAVA 568 Query: 561 RPEN------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE- 613 + + + + L + +S K R ++ +S Sbjct: 569 GETIPHERLLADPTDVFERVTLLQQMRTSKKLSAVQSVVNRASKLAEKGTLNTDVLSASN 628 Query: 614 -ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVL 669 + P ++E + VI+ I S RY ++ + L + + FFD V+ Sbjct: 629 VVDPSLFESQSENSMLEVINSLEP-IAISNSPDRYMKLAEGLAFGSKALAEFFDGEQSVM 687 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V ++ +R+NRL+LL ++N ++ + I Sbjct: 688 VMTTNKSIRENRLNLLSVLRNQAQLIADFNLI 719 >gi|317969808|ref|ZP_07971198.1| glycyl-tRNA synthetase beta subunit [Synechococcus sp. CB0205] Length = 721 Score = 489 bits (1258), Expect = e-135, Method: Composition-based stats. Identities = 179/752 (23%), Positives = 311/752 (41%), Gaps = 84/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+PA A L + L + Y + TP RL + + LS Sbjct: 1 MSTFLLEIGTEELPADFARLALPQLEQAVKRDLSAARLSYGQVETTSTPRRLVVQVSDLS 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +P+ +ER GP G +A GF + G+ + +D KG A + Sbjct: 61 ESAPDLRDERKGPPAAQAFKDGVPTQAAIGFAKRCGIDPAALE--VRDTPKGPFVFAEVL 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L +P I + + MRW S + RP++ ++ +L +E Sbjct: 119 EAGRPARELLAETIPQWIAALQGRRFMRWGVGES-----RFSRPVRWLVALLGSELI-PV 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + + G + GHR ++ + + S D Y L +A V+++ R + I R Sbjct: 173 TLSGSDPVVQSGQTSRGHRLYS-DAVAIPSADAYAAALADAGVVVNRSDRASFIRMSVER 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+ DL EE+ LVE + GS YL LP E++ ++ +Q+ Sbjct: 232 SAAALDAVPDLPSDLFEELTDLVETPLLIEGSVADHYLALPAEVLSTVMRAHQRYVPLYR 291 Query: 295 RE-----------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 ++ L F+ + N A + ++ +GN RV+ ARL DA F + D+ Sbjct: 292 KDADSDPLALDARKSLLARFLCIGNGLA-EASDSVRRGNERVLKARLADAEFFVQADRAV 350 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 +R L V F +G+ +RV R+ L +A+ Sbjct: 351 AS--------------------AERRELLKR--VTFAEGLGSLLDRVERLEWLTALLAEQ 388 Query: 404 I---DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 + + RA + K DL +++V EFPELQG +G +Y + + E A+ EH + Sbjct: 389 LELPNQVADHATRAAHMCKHDLVSQMVGEFPELQGVMGGKYLLAEGEPREVALAVLEHYQ 448 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P+G + +P++ V+LA++ + L++ +A E+P+GS DPYALRRA GI++I+ + Sbjct: 449 PKGAGDALPSSVAGAVVALAERFELLLSIYAKGERPTGSSDPYALRRAGNGILQILWDQG 508 Query: 521 IDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAI- 559 + + +E Q L RL+ L + I DL++A+ Sbjct: 509 WSLNIKTLLERATQHWAKLLPHFKVDAAALAQELSELMGQRLQSLLEEAAIDSDLVQAVA 568 Query: 560 -----LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE- 613 L + L S + R ++ + +S Sbjct: 569 GETVSLERLLADPGDARQRASLLQSLRSGGELTAVQAVVTRAAKLATKGDLPQTVLSASA 628 Query: 614 -ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVL 669 + +E + +V++ + D RY Q+ L + + FF D V+ Sbjct: 629 VVDASLFEKSSEAGMLSVLNSLEP-VATGSDPDRYAQLAQGLIAGASALANFFDGEDSVM 687 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V +D +R NRL+LL + N ++ + +I Sbjct: 688 VMAEDSSIRANRLNLLGVLNNQASVLADFSRI 719 >gi|306832846|ref|ZP_07465980.1| glycyl-tRNA synthetase beta subunit [Streptococcus bovis ATCC 700338] gi|304424985|gb|EFM28117.1| glycyl-tRNA synthetase beta subunit [Streptococcus bovis ATCC 700338] Length = 679 Score = 489 bits (1258), Expect = e-135, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 341/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLNEKRLAFEGIQTFSTPRRLAVRVSGLADAQTDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGLTTDD---IEFREVKGEEYVYVTKHEAGKAAKEVLI 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P +M W+ + F +IRP+ ++ +L E +I Sbjct: 132 D-IPEILSAMTFPVNMHWAN-----NTFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF ++ S D Y DL V+ D + R++ I+N + +++ Sbjct: 181 GRVSRGHRFLGHET-EIASADSYEEDLRRVFVIADAKERQDMIVNQIKDIEKVQNVQVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DDELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDQAGKLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---RAIVLSKADL 422 +A+LD +V FH KIG+ E + R +V+ +A+ A RA + K DL Sbjct: 339 ADLVAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEESKALARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + I++ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELIDNLYALSFDSLTY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R++ + + + D+ EA+L N + +++ L E +A + Sbjct: 517 EHKAEVMDFIRARVEKMM-SKSVSKDIKEAVLAGSNFVVAEMIEAADALVEASKAADYKA 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R+F + + + + EK L ++ ++ S + K Sbjct: 576 AVESLSRVFNLAEK-----TPADVTVDASLFENDEEKALAQAAAEL--NLSGSANDK--- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V VD+ V++NRL++L + V K+ Sbjct: 626 --LAQLFALSPVIDKFFDNTMVMVDNEAVKNNRLAILAELTAKASSVAAFNKL 676 >gi|157826327|ref|YP_001494047.1| glycyl-tRNA synthetase subunit beta [Rickettsia akari str. Hartford] gi|229558572|sp|A8GQ64|SYGB_RICAH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157800285|gb|ABV75539.1| glycyl-tRNA synthetase subunit beta [Rickettsia akari str. Hartford] Length = 662 Score = 488 bits (1257), Expect = e-135, Method: Composition-based stats. Identities = 219/700 (31%), Positives = 343/700 (49%), Gaps = 61/700 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + E + + ++ + P R+ LY L + + EE G Sbjct: 13 IPAFMQKNAEEGYLNIFTQIFAESAI-FAKVQVFVGPRRITLYATHLPKVTLPQEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + + + AI+GF + + + K Y V + +R I+++L I+ AI Sbjct: 72 PSIESPEAAINGFCSAHNVSKLELST--KLINNQLYYFFVKKTKEREIKEILPKIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E ++ L + NITYGH Sbjct: 130 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----VLPLQFGHLTANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V Y L E V+L+ R I LA++ L + ED L+EE Sbjct: 180 RLTDNKKLEVTDFKDYRNKLLENNVVLERIKREEIIKTGLLELANSQNLNIKEDARLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LP+E++ +++T+QK F + G A F+ VSN + + Sbjct: 240 VAGLSEFPVVLLGKIAQKFLELPKEVLIASMRTHQKYFCLFDKTGNFAPYFLFVSNGRFA 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F+K+D ++K L+ R+ +L Sbjct: 300 NA-ELVIQGNEKVLSARLSDALYFYKQD--------------------IAKTLESRLGKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHAK+G E++ I + IA + + A L K+DL +E+V EFP+ Sbjct: 339 E--AVTFHAKLGNLREKIEHITDICNYIAP----NNKDLITAAKLCKSDLVSEMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +NV + ++ KLD+L+ Sbjct: 393 LQGIMGYYYAKYEGLNEEIAAAIRDHYKPQGLSDNVASGNAALLALAD-KLDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-----------EDQNLILFFHDR 541 E P+GS DPYALRR LGIIRIILENK+++ L+ I + + FF +R Sbjct: 452 GEAPTGSGDPYALRRQALGIIRIILENKLELNLNDLIIFSLKLYGNSADKDLITSFFEER 511 Query: 542 LKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 K Y ++ LI A+L NL+ ++ L EF G++ L + KR I+ Sbjct: 512 AKFYFKNK-YDILLINAVLDL---NLVDTQFKLETLKEFLIEDAGKQLLNAYKRASNII- 566 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 +++I+ + + EK L+ V+ I +S+ K Y + +LL + PI Sbjct: 567 ----GDQKITGLVDASLFSTQPEKDLFEVVQKISPQIIDSIADKDYKRALNLLSFLLTPI 622 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD VLVN D ++ NRLSLLQ I ++ + ++ Sbjct: 623 TSFFDNVLVNDPDPKIAQNRLSLLQNICELLNKIAKFNRL 662 >gi|296125974|ref|YP_003633226.1| glycyl-tRNA synthetase, beta subunit [Brachyspira murdochii DSM 12563] gi|296017790|gb|ADG71027.1| glycyl-tRNA synthetase, beta subunit [Brachyspira murdochii DSM 12563] Length = 697 Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats. Identities = 187/740 (25%), Positives = 343/740 (46%), Gaps = 82/740 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+EI EEIPA + A+ I+ LK GV ++++ Y TP RL + + + Sbjct: 1 MKDLLIEILVEEIPADFAYPASISFKKIMEETLKSNGVNFKSVTAYTTPRRLSILAEDVE 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQT-----ISDCQ-----IKKDPK 104 S +++ E GP + G KA +GFL+S + I + + K+ Sbjct: 61 EKSKDEVVEFRGPLFESALKDGVLTKAGEGFLKSHNIDAGLMKNIDENEAFNRPYIKEVN 120 Query: 105 KGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILC 164 K + + + ++ + K+ + K MRW+ F+++RP++++L Sbjct: 121 GKKYLFVKEEKKGVETKKLFEEVLEDIVSKIDFKKKMRWADKD-----FAFVRPIRNVLA 175 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECR 224 + ++II + I N GHR +P ++ + Y + L E V++ E R Sbjct: 176 LF-----GDEIIKTSVAGIETNNKITGHRLLSPEFTEIHNPKDYEKVLLEKHVVVSREKR 230 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 I++ + G E V K + E ++ LVE + FD K+L +P+E++ + Sbjct: 231 LENIISQLENIEKEFGFEAVSKKKVSEIVVDLVEEPYLLTAEFDSKFLEVPKEVLTSEMI 290 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 +QK F ++G L N F++ +N + I+ GN RV+ ARL D ++ D Sbjct: 291 EHQKYFPLCKKDGSLTNVFVITANQPKTPQ---IIAGNIRVLTARLSDGRFLYQED---- 343 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 + K +D+ RL+M ++F ++G+ ++V R+ + + +L+ Sbjct: 344 ----------------IRKGMDEMNERLEM--LMFRKELGSVADKVKRLEKNSELLIKLL 385 Query: 405 D--ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 D + +AI K+DL + +V FPELQG +G +A N N AI E +P Sbjct: 386 GYEKDKDNILKAIKYMKSDLVSNMVYNFPELQGIMGGYFAKAMNLNDDIALAINEQYRPL 445 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 + +P+N +++ DK+D + + + + P+GS+DP ALRR LGII I++++K Sbjct: 446 FAADEIPSNDTGKAIAILDKMDNIAAGFYVGDIPTGSQDPNALRRQALGIINILIKSKKH 505 Query: 523 IPLSQFIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + L + IED +++ FF R + D D D + +L Sbjct: 506 VNLKKLIEDAINSMPKDARNNKSEDLIKDIFEFFKSRFEN---DIDFAKDSVAGVLSTGI 562 Query: 565 DNLLTIVDLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 D++ I+ ++EF + L KRI ++ + + + L E Sbjct: 563 DDMYDAYLKIEAIDEFRKKNEALFSNLLTVFKRIKNMIKSAK------DVNLDEALLKEE 616 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 AEK LY + + + M+++ Y + LL S+ EP++ FF ++VNV+D ++++NR+ Sbjct: 617 AEKSLYNTYKEKLNEVNKLMENREYEKTFSLLASLYEPLDKFFKDIMVNVEDEKIKNNRI 676 Query: 683 SLLQYIKNIILIVINVQKIV 702 +LL + I +++ +V Sbjct: 677 ALLSSVDKIFKNMLDFSSLV 696 >gi|139473280|ref|YP_001127995.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes str. Manfredo] gi|229558581|sp|A2RD24|SYGB_STRPG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|134271526|emb|CAM29749.1| glycyl-tRNA synthetase beta chain [Streptococcus pyogenes str. Manfredo] Length = 679 Score = 488 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 335/713 (46%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLAAQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ ++F +IRP+ ++ +L E +I Sbjct: 132 G-VTEVLSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLG-KETTITSADSYEDDLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R +EG L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NDQAIENVIKGNEKVLVARLEDGEFFWREDQKLQ--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A+ + VDRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLSGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EAIL + ++ + + L + + + Sbjct: 517 TNKADVMNFIRARVDKMM-GKAAPKDIREAILASSTFVVPEMLAVAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVHVDPSLFENEQENTLFAAIQGLTLAGSAA------- 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + + + I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 624 QQLEQVFVLSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|15642990|ref|NP_228032.1| glycyl-tRNA synthetase, beta subunit [Thermotoga maritima MSB8] gi|11387212|sp|Q9WY60|SYGB_THEMA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|4980715|gb|AAD35309.1|AE001706_8 glycyl-tRNA synthetase, beta subunit [Thermotoga maritima MSB8] Length = 672 Score = 488 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 179/723 (24%), Positives = 328/723 (45%), Gaps = 77/723 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA H + L LLK V ++ + R + LK L Sbjct: 1 MRTALLEVGLEELPASEFHSILKQLEEKSAELLKAYRVSSGSVEVFVGSRRFGVILKNLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EE+ GP + G +A++GFLR+ ++ + Sbjct: 61 ERQEDFTEEKKGPPLNVAYDENGKPTRALEGFLRNNNAS------LENVVHREGYVYLSR 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +E+VL + + + + K MRW + +IRP+ I+ + Sbjct: 115 VVEGKPVEEVLPDLFRDLVLGLNFRKPMRWGSGEH-----EYIRPVHWIVAM-----VDG 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++DL++ + I+YG R+HA I++ + Y L++ V+ R+ +L Sbjct: 165 RVLDLEIFGLRSSRISYGKRYHA-GSIEIPDSERYYESLKKGFVISSHLERKKFVLEQID 223 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +++ D++L+EEI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ F+ Sbjct: 224 EFEKRSSMKIERDEELIEEIVAITEYPRIVVGQFDRKYLELPEEIIVTAVKHHQRSFI-- 281 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L N F+ + +V+G RV+ ARLEDA +++++D Sbjct: 282 AHKGTLTNTFVAFQDGP--QPPENVVKGYERVINARLEDARYYFQKD------------- 326 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 L PL++ +L ++VF K+GT ++V RI+ + +++ + + + Sbjct: 327 -------LETPLEKMNEKLK--EIVFQEKLGTLYDKVERIKKISQRLCEDLKLPGSFTQK 377 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V A + KAD+ +++V EFPELQG +G+ YA+ + N AIE+H P Sbjct: 378 VLEAASICKADIASKVVYEFPELQGVMGRIYALREGINEEIATAIEDHY------SEEPQ 431 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I + +AD++DT++ +AI P+ SKDPY L+ I RII +N+ DI L + + Sbjct: 432 TVIGSILGIADRIDTIVGNFAIGNVPTSSKDPYGLKSKADTIFRIIRKNEWDISLEELLT 491 Query: 531 D----------QNLILFFHDRLKLY-LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + L FF R + +++ I D+ A+ L I+ + L E Sbjct: 492 FASSLVGYRLSEELETFFAGRFYQFLINELGISFDVARAVNHLWKKPLRGILS-AEALQE 550 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + + +R+ I + S + E EK+L + + Sbjct: 551 ISEKPEFQDLFVGFERVHNITKNHD------STKFDGALFEKEEEKKLMNKFYEVKEKVL 604 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++++ Y + L + I+ +FD V V V ++R NRLS L+ I + ++V ++ Sbjct: 605 KALERLNYREALQYLIELKPYIDEYFDNVFVMVKRDDLRVNRLSFLKNIDELFMMVGDMT 664 Query: 700 KIV 702 +V Sbjct: 665 YLV 667 >gi|298230969|ref|ZP_06964650.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae str. Canada MDR_19F] Length = 646 Score = 488 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 192/695 (27%), Positives = 321/695 (46%), Gaps = 77/695 (11%) Query: 32 LLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV-------GAGKKAIDG 84 LKE + ++ ++ + TP RL + + GLS + E+ GP G KA G Sbjct: 1 FLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGPAKKIALDSDGNFTKAAQG 60 Query: 85 FLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRW 143 F+R GL I+ KG+ Y+ V ++ + +E ++ +V ++ + +P SM W Sbjct: 61 FVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQSVEAIVPGVV-DVLKSLTFPVSMHW 116 Query: 144 STTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQ 203 + ++F +IRP+ ++ +L E+ DLD +I ++ GHRF +Q Sbjct: 117 A-----GNSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKGSRVSRGHRFLGKETK-IQ 165 Query: 204 SLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVF 263 S Y DL + V+ DP R I++ + + G+ + D DLL E++ LVE+ F Sbjct: 166 SALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVHIEIDADLLNEVLNLVEYPTAF 225 Query: 264 MGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNS 323 MGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V N A + +++GN Sbjct: 226 MGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISVRNGNA-ERLKNVIKGNE 284 Query: 324 RVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKI 383 +V+ ARLED FW+ DQ + + + +L+ +V FH KI Sbjct: 285 KVLVARLEDGEFFWREDQKLV--------------------ISDLVEKLN--NVTFHEKI 322 Query: 384 GTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLCTEIVREFPELQGKIGKE 440 G+ E + R + +A+ V + RA + K DL T +V EF ELQG +G++ Sbjct: 323 GSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDLLTGMVGEFDELQGIMGEK 382 Query: 441 YAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSK 500 Y +L E + AI EH P +P +K+ +++ADKLDT+++F+++ PSGS Sbjct: 383 YTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKLDTILSFFSVGLIPSGSN 442 Query: 501 DPYALRRATLGIIRIILENKIDIPLSQFIE--------------DQNLILFFHDRLKLYL 546 DPYALRRAT G++RI+ I + + I+ ++ F R+ + Sbjct: 443 DPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYENKAEVMDFIKARVDKMM 502 Query: 547 HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK 606 D+ EA+L N + +++ L E + + S R F + E Sbjct: 503 GS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKPSVESLSRAFNLAEKAEGV 560 Query: 607 NREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 + + EK L + S Q L ++ I+ FF+ Sbjct: 561 -----ATVDSALFENDQEKALAEAVETLVLSGPAS-------QQLKQLFALSPVIDAFFE 608 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +V +D+ VR NRL++L + +I Sbjct: 609 NTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 643 >gi|254432216|ref|ZP_05045919.1| glycyl-tRNA synthetase, beta subunit [Cyanobium sp. PCC 7001] gi|197626669|gb|EDY39228.1| glycyl-tRNA synthetase, beta subunit [Cyanobium sp. PCC 7001] Length = 725 Score = 488 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 183/751 (24%), Positives = 313/751 (41%), Gaps = 84/751 (11%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLEI +EE+PA A L ++ L E+ + + ++ TP RL + + GL Sbjct: 6 STFLLEIGTEELPADFARLALPQLEALVAASLAEQRLEHGDLDCTSTPRRLAVTVPGLPS 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ EER GP G A GF + G+ +D KG AVLR+ Sbjct: 66 RQQDREEERKGPPAAQAFRDGTPTGAALGFAKRCGVAVDQLEI--RDTPKGPFVYAVLRE 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R +VL +++P IQ++ + MRW + RP++ ++ +L E + Sbjct: 124 PGRGAAEVLASLIPGWIQQLQGRRFMRWGEGEC-----RFSRPVRWLVALLD-EAVVPVV 177 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHR P+ + S Y LE A V + RR+ I Sbjct: 178 LPGTDPVVASGRHSRGHR-LETRPVVIPSAAQYADTLEAAGVTVSRRRRRDRIQTSIAAA 236 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A + LLEE+ LVE + G+ + YL LP E++ ++++Q+ Sbjct: 237 AEARDARPDLPEALLEELTDLVEQPLLIEGAMEHTYLDLPAEVLGTVMRSHQRYVPLYQS 296 Query: 296 E-----------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 + GVL F+ +SN + + +GN RV+ ARL DA F D+ Sbjct: 297 DAQVDPLAPAARGVLQPGFLCISNGR-EQAWETVRRGNERVLRARLADARFFVTADRAVA 355 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 R +L V F +G+ +RV R+ + +++ Sbjct: 356 S--------------------IDRRDQL--ARVTFAEGLGSLRDRVERMEWCTDVLLEVL 393 Query: 405 ---DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + RA L K DL +++V EFPELQG +G +Y + + E A+ EH P Sbjct: 394 PLPEEAAGHARRATHLCKHDLVSQMVGEFPELQGVMGAKYLLAEGEPRHVALAVLEHYLP 453 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 RG + +P ++ V+LA++L+ L++ +A E+PSGS DPYALRRA G+++I+ + Sbjct: 454 RGAGDALPESEAGAVVALAERLELLLSIFAKGERPSGSSDPYALRRAGNGLLQILWAREW 513 Query: 522 DIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 + L ++ +L F RL L + + DL+ A+ Sbjct: 514 RLDLDALLQRCSLHWATLLPDLEVSAGLLRGDLAEFLCQRLASLLEEEGLEPDLVAAVAG 573 Query: 562 PE------NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE-- 613 P + + L + R ++ +S + Sbjct: 574 PSLPRARLLRDPGDVRQRGLLLAALRREGRLAAVQAVVTRAARLAEKGALSPDVLSPDAV 633 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLV 670 + + +E + AV+ + S + Y+ + L E + FFD V+V Sbjct: 634 VDARLFEKGSEAGMLAVLERLTP-LAASCSSEGYNALASALEDSAEALGAFFDGDGSVMV 692 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D VR NRL++L ++N ++ + +++ Sbjct: 693 MAEDAAVRTNRLAMLGVLRNQAAVLADFRQL 723 >gi|50914778|ref|YP_060750.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS10394] gi|73919752|sp|Q5XAJ6|SYGB_STRP6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|50903852|gb|AAT87567.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS10394] Length = 679 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 335/713 (46%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLAAQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ ++F +IRP+ ++ +L E +I Sbjct: 132 G-VTEVLSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLG-KETTITSADSYEDDLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R +EG L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NDQAIENVIKGNEKVLVARLEDGEFFWREDQKLQ--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A+ + VDRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLSGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLAY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EAIL + ++ + + L + + + Sbjct: 517 TNKADVMNFIRARVDKMM-GKAAPKDIREAILASSTFVVPEMLAVAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVHVDPSLFENEQENTLFAAIQGLTLAGSAA------- 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + + + I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 624 QQLEQVFVLSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|297815990|ref|XP_002875878.1| aminoacyl-t-RNA synthetase [Arabidopsis lyrata subsp. lyrata] gi|297321716|gb|EFH52137.1| aminoacyl-t-RNA synthetase [Arabidopsis lyrata subsp. lyrata] Length = 1083 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 176/736 (23%), Positives = 339/736 (46%), Gaps = 83/736 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F++EI +EE+P + A+E L ++++ LL+++ + + ++ + TP RL + + +S Sbjct: 386 FIIEIGTEEMPPQDVINASEQLRVLVLELLEDQRLRHGAVKAFGTPRRLVVLVDAMSSKQ 445 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E GP G KA DGF R G+ +K K + A + +P Sbjct: 446 LEEEVEVRGPPASKAFDDQGNPTKAADGFSRRYGVPLEK--LYRKVSGKTEYVHARVTEP 503 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +VL +P + K+ +PKSMRW+ S+ + RP++ ++ + + ++ Sbjct: 504 ARRALEVLSEDLPGILAKISFPKSMRWN------SSVMFSRPIRWVMAL-----HGDLVV 552 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPE-------------- 222 I GN++ G R A + VQ+ + Y + + + ++ E Sbjct: 553 PFSFAGISSGNVSCGLRNTASASLFVQNAESYEDAMRNSGINIEIEAFMDLCCHFIGYHN 612 Query: 223 --CRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIR 280 R+ IL ++ LA +V LV +DLL E+ LVE +G F + +L LPEEL+ Sbjct: 613 LQERKKIILEKSNALAKSVNGRLVVPQDLLNEVANLVEAPVPLIGKFKESFLELPEELLT 672 Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 + ++ +QK F G L FI V+N ++ + +GN V+ AR EDA F++ D Sbjct: 673 IVMQKHQKYFSIIDESGQLLPYFIAVANGAINE--DVVKKGNEAVLRARYEDAKFFYEVD 730 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 K + +L ++FH K+GT ++++R++ + K+ Sbjct: 731 TR--------------------KRFSEFRDQLQ--GILFHEKLGTMLDKMNRLKKMVSKL 768 Query: 401 AQLIDADVAL---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 ++ D L V+ A L+ +DL T +V EF L G + + YA+ + + +A+ E Sbjct: 769 CLALEIDEDLLPVVEDAASLAMSDLATAVVTEFTALSGIMARHYALRDSYSEQIAEALLE 828 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 PR + +P + +++AD+LD+L+ +A +PS + DP+ LRR + G+++I++ Sbjct: 829 ITLPRFSGDVIPKTDAGMVLAIADRLDSLVGLFAAGCQPSSTNDPFGLRRISYGLVQILV 888 Query: 518 ENKIDIPLS--------------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 E ++ + +++ F RL+ L D + +++ ++L Sbjct: 889 EKDKNVNFKRALELAASVQPTKVEANTVEDVYQFVTRRLEQLLVDNGVSPEVVRSVLAER 948 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +N + + K + + R +I+ K+ + +++ Sbjct: 949 GNNPCLAARTAYKMEKLSKGEIFPKIVEAYSRPTRIVR---GKDVGVGVKVDENAFETSQ 1005 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E+ L+ + I ++ + + ++ + EP+E FF+ V V V++ VR NRL+ Sbjct: 1006 ERTLWRTYTSIKDRIHTGIEIEEFTEVSM---QLVEPLEDFFNNVFVMVEEERVRKNRLA 1062 Query: 684 LLQYIKNIILIVINVQ 699 LL I N+ VI++ Sbjct: 1063 LLNNIANLPTGVIDLS 1078 >gi|78777189|ref|YP_393504.1| glycyl-tRNA synthetase subunit beta [Sulfurimonas denitrificans DSM 1251] gi|78497729|gb|ABB44269.1| Glycine--tRNA ligase [Sulfurimonas denitrificans DSM 1251] Length = 673 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 194/719 (26%), Positives = 342/719 (47%), Gaps = 69/719 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 L+EI EE+PA + +++ +L++ ++ N Y+TP RL L+ + Sbjct: 3 KTLLIEIGVEELPAVPLLRELKNIEKKYADILEKHSLL-GNFEFYYTPRRLVLWHREFKS 61 Query: 62 HSPEKIEERLG-P-----RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 E +EE G P + G A GF + G+ KD K +V Sbjct: 62 MQDESVEEFFGAPLSVAYKDGVATPAALGFAKKCGVGIDEITTTIKDNK--EVIYYKRAL 119 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L TI+ I + + KSMRW + S+IRP++ + L +++ Sbjct: 120 MAKESSHLLPTIIKEWIDSLEFGKSMRWGSLQE-----SFIRPIRWVNVQLA-----DEL 169 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ + T+ HR I++ Y LE+ V L R I+ D + Sbjct: 170 VDMEIFGVKSAKKTFVHRISNFEAIEINGAKEYFEVLEDGGVTLFATQREKKIVEDFASI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 G+++ DK+LL+E++ + E +GSFD+++L LP E+I ++K +Q+ F + Sbjct: 230 EKENGVKIEIDKELLDEVVAITENPTAILGSFDEEFLKLPPEVIITSMKEHQRYFPVF-K 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L N F++VSN +D ++GN RV+ RL DAL F+ D + + L+ Sbjct: 289 DGKLINRFVVVSNAFTNDFSKV-IEGNERVLRPRLSDALFFYNNDLKKGLSTAGLE---- 343 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK---KIAQLIDADVALVD 412 VVF +G+ +++ R R + I + + + +D Sbjct: 344 --------------------KVVFMKGLGSVADKIERERKIAHALFDIYKPLHVTLEELD 383 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 R+I L+KADL +E+V EF ELQG +G YA L E+ + AI E P G +P+NK Sbjct: 384 RSITLAKADLMSEMVYEFTELQGLMGSYYASLLGESQNVATAIREQYLPDGEDSALPSNK 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF---- 528 +S V+++ KLDTL+ ++IN+ P+GS+DP+ALRRA G+IR+ E+ ++ + + Sbjct: 444 MSAIVAMSLKLDTLLGLFSINQIPTGSRDPFALRRAVNGLIRVTKEHDLEFDIVKTLTLL 503 Query: 529 ------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + L FF +R++ Y + ++EA+L LL I I L + Sbjct: 504 SKNYDSFDISKLEAFFLERVRQYFK---VNPSIVEAVLISGERELLRISKKISALESMVN 560 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 S ++ + KR+ I + N + I+ + AE L+ ++ ++ Sbjct: 561 SQGFSEYFSTFKRVANITKDIDMSNIK---AINEKLFENSAEDALFKRYNEVC-----AI 612 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + Y + D L S+ ++ FF+ V+VN +D +R+NR +L+ I IL + ++++I Sbjct: 613 SYNSYEEELDALFSLKRELDSFFNDVMVNAEDESIRENRKALIASIYKSILKIADIKEI 671 >gi|157163964|ref|YP_001467077.1| glycyl-tRNA synthetase subunit beta [Campylobacter concisus 13826] gi|112800407|gb|EAT97751.1| glycyl-tRNA synthetase, beta subunit [Campylobacter concisus 13826] Length = 672 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 190/717 (26%), Positives = 347/717 (48%), Gaps = 63/717 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LLEI EE+PA + +++ +L++ + + Y+TP RL + + Sbjct: 1 MKELLLEIGVEELPAIPFLRELPNINAKWQAVLEKYNIK-SEFKFYYTPRRLVFFHEKFP 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+ + +G GA KA F G+ K+ +V Sbjct: 60 LAQPDSVASFVGAPKQVALKDGAFTKAALSFANKCGISESELKF--KEIDGKEVLYYEKE 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++ +V ++ + + KSMRW F +IRP++S LC+L ++ Sbjct: 118 VKGEPVAKIMGDMVEEFLKSLSFGKSMRWGNGE-----FEFIRPIRSFLCLL-----GDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I + + N TY HR + IK+ ++ Y + ++L+ + R IL++ + Sbjct: 168 VIKFNKFGVESSNSTYPHRSISYDMIKISNIKEYFEGSKSRGIVLEADEREKIILDEFEK 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 ++ GL++ DKDLL E++ + E+ +GSF++++L +P E+I ++K NQ+ F Sbjct: 228 ISQKSGLKIEIDKDLLAEVVAITEYPTALLGSFEEEFLEVPSEVIITSMKENQRYFPVF- 286 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G LAN F++VSN D + I++GN +V+ ARL DA+ FW+ D + LK Sbjct: 287 KDGKLANGFVVVSNAITKDY-SLIIKGNEKVLRARLSDAMFFWQSDLAHEFGPEKLKN-- 343 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L L ++ ++ G+ + + A ++RA Sbjct: 344 --------------ITYLKELGSIYEKELRELKVAKKLASNYGELLKKEAGEYEAKLERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 ++LSKADL T++V EF ELQG +G YA +NE+ + AI+E P G P+ S Sbjct: 390 VMLSKADLTTQMVYEFTELQGVMGAYYAKAKNEDENVVLAIKEQYLPDGEEAQCPSKVFS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN- 533 V+L++KLDTL+ ++I + PSG+KDPYALRRA G+I+I+L + + + + +ED Sbjct: 450 SVVALSNKLDTLMGLFSIGKIPSGTKDPYALRRAANGVIKIVLAHSLKFDVKEILEDIAK 509 Query: 534 ---------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 LI F DRL + D +++A ++ ++L + +I+ L + S Sbjct: 510 EYKKFDVEVLINFILDRLYTFF---DANASIVKACIKSGEKDILELTKMIEALAKISSEP 566 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + + KR+ I+ ++ ++ ++AEK L + Sbjct: 567 NFRENFSTFKRLANIIKDDKFS------MVNESLFEIDAEKALNDAFKAVDKSLA----- 615 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y L ++ I+ FFD+V++NV++ +VR+NR++++ I + IL V ++++I Sbjct: 616 --YEPRLKALFALKPQIDEFFDKVMINVENEKVRNNRVAIIGQIYSEILKVADIKEI 670 >gi|330818265|ref|YP_004361970.1| Glycyl-tRNA synthetase beta subunit [Burkholderia gladioli BSR3] gi|327370658|gb|AEA62014.1| Glycyl-tRNA synthetase beta subunit [Burkholderia gladioli BSR3] Length = 699 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 201/714 (28%), Positives = 327/714 (45%), Gaps = 61/714 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + + + + L L +I ++ TP RL + + + +PE+ E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLIDGEAVFERFATPRRLAVLILNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G + +++ K + + P + D Sbjct: 79 VLPVSVALDANGNPTPPLAKKLAALGRPELGIADLERAQDGKAEAFFLNYSAPGVTLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + + ++ + I Sbjct: 139 LQAALKETLDKLPIPKVMTYQRPDG--SDVQFVRPVHRLTVLHDTD-----VVPVSAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + + S Y L E V+ R+ I A G Sbjct: 192 DAGDTTLGHRFLSSGAVAIGSAAGYAETLRERGRVIAHFVDRKEQIRTALAEQAG--GDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVASLVEWPVVYACRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ + IV+GN RVV RL DA F++ D+ Sbjct: 310 FLIVSNIETA-TPVEIVEGNERVVRPRLADAKFFFETDK--------------------K 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 L R+ RL +VV+H K+G+Q RV RI + IA I AD AL RA L+KADL Sbjct: 349 TRLADRVPRL--ANVVYHNKLGSQLARVERIEAIAAGIAPAIGADPALAQRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +P +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEEVAVACTEHYQPRFSGDTLPEAAVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+TL+ W I P+G KDP+ALRR LG++R++LE ++ + + + Sbjct: 467 LETLVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDIVELLRAAQASFAGIAGV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L E + ++ + + EF A+ E Sbjct: 527 ADSTDAIFAFFLDRLRGLLRERGYSAGEIDAVLGLEPTRIDELIARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K I P L AE+ L A +++ +Q + + Y Sbjct: 587 TLAAANKRISNILK---KSEGAAPGAIQPALLAEPAEQALAAQLAEVAPRVQSQLAARDY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKL 697 >gi|217967701|ref|YP_002353207.1| glycyl-tRNA synthetase, beta subunit [Dictyoglomus turgidum DSM 6724] gi|226737050|sp|B8E0E8|SYGB_DICTD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|217336800|gb|ACK42593.1| glycyl-tRNA synthetase, beta subunit [Dictyoglomus turgidum DSM 6724] Length = 689 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 196/727 (26%), Positives = 346/727 (47%), Gaps = 68/727 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FLLEI +EE+PA A + + + + + + +++++ + TP RL +Y+K LS Sbjct: 3 KNFLLEIGTEEMPAHFLDPAIKQIYDFSLNYFENQKISFEDIKTWATPRRLVVYIKNLSE 62 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G + F G + K+ +G K Sbjct: 63 KQESQEEEIRGPAAHVGYKNGVWTEVAKRFAEQYGASL--EALYIKETPRGKYIFLKRIK 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L ++ + +PK M+W F + RP++ I+ + +E+ Sbjct: 121 EGVNTLEILPDYAVSLLKNIRFPKMMKWGNVD-----FYFGRPIRWIVALYGSEE----- 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ + + RF PI+++ D YI ++E V++D R+N IL + Sbjct: 171 VKFEVAGVKSSRYSRPPRFLPQTPIEIKDADSYIDLMKENYVIVDQNERKNEILRHIKEI 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A++ L L D+DLLEE+ LVE+ +G FD KYL LPE ++ +T++ Q+ F R + Sbjct: 231 ANSNSLTLSYDEDLLEEVTYLVEYPTALLGQFDSKYLTLPEIVLIVTMEKKQRYFPLRDK 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L N FI++ N + ++QGN +V+ ARL DA +++ D Sbjct: 291 EGNLINKFIVIRNG-TENYKEVVIQGNEKVLKARLADAEYYYNEDIRC------------ 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 PL++ +L ++F ++GT ++V R+R+L ++IA +++ + +++ Sbjct: 338 --------PLEKYSEKLS--GIIFQEQLGTIKDKVERVRILVREIANILELSTEEKEILE 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA+ L KADL T +V E+PEL G +G YA + E I E++ PR + +P N Sbjct: 388 RAVDLYKADLGTLMVSEYPELHGIMGSIYAKISGEREPIPQIIGEYIYPRTLEDQIPKNP 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--- 529 +S + +AD++D+L ++A++ P+GS+DP LRR + G++R++LE + L Sbjct: 448 LSTVLGIADRVDSLTGYFALDLFPTGSEDPIGLRRISGGLLRLLLETDFKLNLRNLFMKS 507 Query: 530 -------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + + +LF RL+ L D+ +D++EA++ D L + + Sbjct: 508 FEVYKFSDKCPISQIEKGMLFIGQRLRNLLLDK-YPNDIVEAVMEVGYDELWKLKRRVDF 566 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + EF EK + R+++IL + EI+ EK LY Sbjct: 567 IREFKEKDPYEKLKRALNRLYRILPKDFS-----PKEINENLFNSPFEKELYRDYVKINK 621 Query: 637 HIQESMDHKRYHQIG--DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I + + Y + D L + IE FFD VLV + E + NRLSLL IK++ Sbjct: 622 EISKEILKGNYKVLLGYDFLKEFSDHIESFFDHVLVMSPNEEEKLNRLSLLFAIKSLFWE 681 Query: 695 VINVQKI 701 V++ K+ Sbjct: 682 VLDWSKL 688 >gi|251783139|ref|YP_002997442.1| glycyl-tRNA synthetase subunit beta [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391769|dbj|BAH82228.1| glycyl-tRNA synthetase beta chain [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 679 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 200/713 (28%), Positives = 332/713 (46%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + ++N++ + TP RL + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFENIQTFSTPRRLAARVIGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDTDGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ ++F +IRP+ ++ +L E +I Sbjct: 132 G-VAEVLTAMTFPVSMHWA-----KNSFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ + +A G+++ Sbjct: 181 GRVSRGHRFLG-KETTITSADSYEDDLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L FI Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NDQAIDNVIKGNEKVLVARLEDGEFFWREDQKLQ--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A+ + VDRA + K DL Sbjct: 339 ADLVAKL--ANVTFHEKIGSLTEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLSGEDAAVATAIREHYLPDAAEGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + + D+ EA+L + ++ + L + Sbjct: 517 ANKADVMSFIRARVDKMM-GKAVPKDIREAVLESSTFVVPEMLAAAEALVNASHKENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + P + E+ L+A I Sbjct: 576 AVESLSRAFNLAEKA-----DASVRVDPSLFENDHEQALFAAIQSLSLEGSA-------E 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V DD+ +++NRL+LL + + ++ Sbjct: 624 NQVEQVFALSPEINDFFDNTMVMADDQAIKNNRLALLAALVGKAKSIAAFNQL 676 >gi|301060996|ref|ZP_07201795.1| glycine--tRNA ligase, beta subunit [delta proteobacterium NaphS2] gi|300444915|gb|EFK08881.1| glycine--tRNA ligase, beta subunit [delta proteobacterium NaphS2] Length = 624 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 186/660 (28%), Positives = 305/660 (46%), Gaps = 66/660 (10%) Query: 67 IEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 +E GP GA KA GF + G+ I+ KG+ P R Sbjct: 2 TQEVTGPPKKVAYDKNGAPTKAAAGFAKKQGVSVDELQTIE--TPKGEYLYVKQEIPGRP 59 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 ++L +P I ++PWPKSMRW +F ++RP+ IL + +++ + Sbjct: 60 TLEILSERLPGIIGEIPWPKSMRWGAV-----SFPFVRPVHWILSLFDG-----RVVPFE 109 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + GN T+GHRF AP + V +++ Y + LE A V+LDP R+ +L A A+ V Sbjct: 110 AAGVQSGNSTFGHRFMAPEAVNVSTVEDYRKALENAFVVLDPHERQKVVLKVAQDAAANV 169 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G +D +L++ + L E+ GSF+ +L LP+ ++ ++ +QK F G L Sbjct: 170 GGVPADDPELVQTVANLTEYPTAVCGSFENAFLDLPDAVLITAMREHQKYFAVYDDVGSL 229 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 F+ ++N + D + + +G+ RV+ ARL DA F K D+ Sbjct: 230 MPNFVAINNTKTRDE-SVVCRGHERVLRARLSDADFFLKEDR------------------ 270 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV-LGKKIAQLIDADVALVDRAIVLS 418 +PL +R+ L V++ A++GT +V R+ AQ+I V A L+ Sbjct: 271 --KRPLLERLEDLKQ--VIYQAQLGTSYAKVMRVEALTAHISAQVIPEQVDGAKLAARLA 326 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EFP LQG +GK YA L+ + C I +H P +P +I V Sbjct: 327 KCDLVTHMVIEFPSLQGAVGKAYAELEGYDEEICSGIYDHYLPLKAGGALPQTEIGAVVG 386 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------- 530 +AD+LDT+ +A+ +P+G DP+ALRR L +IRII + D+ +E Sbjct: 387 MADRLDTIAGCFAVGLEPTGKADPFALRRHALAVIRIIEDRGWDLSFKSLVEKALSLLAE 446 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + F +R K + D DL+EA + E D +L++ ++ L EF Sbjct: 447 DITFDFDDTFGRVTAFIRERYKNMMLRSDYASDLVEAAICNEFDRILSLRPKMEQLKEFS 506 Query: 582 -SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 SS + L+ KR+ I+ + + + P + +AEK L+ ++E Sbjct: 507 FSSEEFTPLALTFKRVNNIIKKQGRM-----FSVDPAHFKEDAEKDLWEAYQSLKGDVEE 561 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + + ++ + P++ FD V + DD R+NR+ LLQ I N +L + + K Sbjct: 562 CIGKSAFLDALGIMTRLRTPVDRLFDHVEILTDDETQRENRVGLLQLISNFVLTIADFSK 621 >gi|312864172|ref|ZP_07724406.1| glycine--tRNA ligase, beta subunit [Streptococcus vestibularis F0396] gi|322517253|ref|ZP_08070132.1| glycyl-tRNA synthetase beta subunit [Streptococcus vestibularis ATCC 49124] gi|311100173|gb|EFQ58382.1| glycine--tRNA ligase, beta subunit [Streptococcus vestibularis F0396] gi|322124159|gb|EFX95693.1| glycyl-tRNA synthetase beta subunit [Streptococcus vestibularis ATCC 49124] Length = 678 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 200/700 (28%), Positives = 334/700 (47%), Gaps = 77/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDNNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKPAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ + F +IRP+ +++ +L ++ ++LD +I Sbjct: 132 G-VPEVLSSLTFPVSMHWAN-----NTFEYIRPVHTLVVLL-----GDEALNLDFLDIKS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF +++ + D Y DL V+ D + R N I + S G+++ Sbjct: 181 GRVSRGHRFLGHE-VEITNADSYEEDLRTVYVIADSKERENMIREQIKAIESEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGKLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEERAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYALSFDSLSY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +I F R+ + D+ EA+L N + ++++ L+ + + Sbjct: 517 DNQAEVINFIKARVDKMMG--RTSKDIKEAVLAGSNFVVADMLEVADALSAAAKADGYKA 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + EK L I + S Sbjct: 575 AVESLSRAFNLAEKA-----DDSVAVDASLFENNQEKVLSKAIEELELTGSASDK----- 624 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 L ++ I+ FFD +V +D V++NRL+LL + Sbjct: 625 --LAQLFALSPVIDAFFDNTMVMAEDEAVKNNRLALLSSL 662 >gi|323127883|gb|ADX25180.1| glycyl-tRNA synthetase subunit beta [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 679 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 201/713 (28%), Positives = 332/713 (46%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + ++N++ + TP RL + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFENIQIFSTPRRLAARVIGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDTDGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ ++F +IRP+ ++ +L E +I Sbjct: 132 G-VAEVLTAMTFPVSMHWA-----KNSFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ + +A G+++ Sbjct: 181 GRVSRGHRFLG-KETTITSADSYEDDLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L FI Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +V+GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NDQAIDNVVKGNEKVLVARLEDGEFFWREDQKLQ--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A+ + VDRA + K DL Sbjct: 339 ADLVAKL--ANVTFHEKIGSLTEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLSGEDAAVATAIREHYLPDAAEGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + + D+ EA+L + ++ + L + Sbjct: 517 ANKADVMSFIRARVDKMM-GKAVPKDIREAVLESSTFVVPEMLAAAEALVNASHKENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + P + E+ L+A I Sbjct: 576 AVESLSRAFNLAEKA-----DASVRVDPSLFENDHEQALFAAIQSLSLEGST-------E 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V DD+ +++NRL+LL + + ++ Sbjct: 624 NQVEQVFALSPVINDFFDNTMVMADDQAIKNNRLALLAALVGKAKSIAAFNQL 676 >gi|88808503|ref|ZP_01124013.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 7805] gi|88787491|gb|EAR18648.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 7805] Length = 719 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 177/753 (23%), Positives = 302/753 (40%), Gaps = 88/753 (11%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + FLLEI +EE+PA A L + L + + + + TP RL + +K L Sbjct: 1 MANTFLLEIGTEELPADFVPSALRQLEQRVRSDLNDLRLAHGELSVTGTPRRLLVVVKDL 60 Query: 60 SPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+ E+R GP V G A GF + G+ ++ KG A + Sbjct: 61 IDSQPDLEEDRKGPPVSSAFVDGRPGPAAIGFAKRCGVDPSDLQP--RETPKGPCLFAQV 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + P + +L VP I + + MRW + RP++ ++ +L + Sbjct: 119 KTPGQASSALLGQYVPRWIDALQGRRFMRWGCGEQ-----RFSRPVRWLVVLL-GDALIP 172 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +D + G + GHR H P V+S + + L A V+++ E R I Sbjct: 173 VTLDAADPVVTSGRTSRGHRLHQP-LKDVKSAEELLAQLARAGVMVNREQRAETIRTAIA 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A G + + L +E++ LVE V G ++L LP E+I ++ +Q+ Sbjct: 232 QEAERCGGQANCPESLFQELVDLVETPSVLKGKIADRFLDLPPEVIVTVMQAHQRYVPLL 291 Query: 294 TRE-----------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 + VL F+LVSN IV GN RV+ ARL DA F D+ Sbjct: 292 HPQAGSDPLQLQSRNVLRPEFLLVSNGL-EPASDTIVSGNQRVLGARLADAEFFLTVDRR 350 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 + +QR A L V F +GT +R R+ + ++ Sbjct: 351 --------------------QSSEQRRANL--AQVTFAEGLGTLLDRSERMSWVMDQLLL 388 Query: 403 LIDAD---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 + + + RA K DL ++V EFPELQG +G +Y + + E A+ EH Sbjct: 389 ALQLEGPIASHARRAAHFCKHDLVCQMVGEFPELQGLMGGKYLLEEGEVRDVALAVAEHY 448 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 +P G + PT+ ++LA++++ L++ +A ++P+GS DPYALRRA GI++I+ Sbjct: 449 QPAGAGDAPPTSDAGALLALAERIELLLSIFAKGQRPTGSSDPYALRRAGNGIVQILWNR 508 Query: 520 KIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAI 559 +PL + +L R+ + DL++A+ Sbjct: 509 GWRLPLQSLFKTAATHWAERFPAFKVEASALANDLGQLLRQRMVSQFEEDGFEIDLVQAV 568 Query: 560 LRPEND------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE--KKNREIS 611 + + D + LN +S + + +R ++ + + + Sbjct: 569 SGDGVSTDRLLEDPVDARDRLLLLNNLRTSGRLQGLQAVVQRASRLADKGDLPLSSLCVE 628 Query: 612 LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QV 668 + + +E L + + Y + L +E FFD V Sbjct: 629 GVVDAELFDSPSEASLLVELEAMSP----LAVARDYEGLAQKLQGAARALEAFFDGAESV 684 Query: 669 LVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +V DD +R NRL+LL ++N ++ I Sbjct: 685 MVMADDPSIRRNRLNLLGVLRNQAFVLARFDNI 717 >gi|259046827|ref|ZP_05737228.1| glycyl-tRNA synthetase, beta subunit [Granulicatella adiacens ATCC 49175] gi|259036450|gb|EEW37705.1| glycyl-tRNA synthetase, beta subunit [Granulicatella adiacens ATCC 49175] Length = 689 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 190/716 (26%), Positives = 337/716 (47%), Gaps = 70/716 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ ++E L+ + K+E + +++ + TP RL + + GL ++ E GP Sbjct: 15 PAQYVRTSSEQLAKRVEDFFKDENLEFESFEAFATPRRLAVRVNGLVEEQADREEIFKGP 74 Query: 74 ------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTI 127 + GA KA +GF+R GL T ++ + + ++V+K Sbjct: 75 SLAIAQKDGAWTKAAEGFVRGKGLTTDD--IYVEEVNGVEYIHVKQHIAGKSTKEVVKN- 131 Query: 128 VPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGN 187 + I + +P +MRW+ F ++RP+ I+ + E +E + ++ G Sbjct: 132 LSSVITDMKFPVTMRWAAH-----TFEYLRPIHWIVALYGNEVIEEIGV----LDVKAGR 182 Query: 188 ITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDK 247 + GHRF +++ + Y + L E V+++ + R+ + LA+ + D+ Sbjct: 183 TSRGHRFLG-KEATIENPESYEKALAEQFVIVNQDERKALVRKQIEELAADNNWIIPIDE 241 Query: 248 DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVS 307 DLLEE+ ++E+ F G+FD+KYL +PE ++ ++K +Q+ FV +E L F+ V Sbjct: 242 DLLEEVSSILEYPTAFAGTFDEKYLVVPEPVLVTSMKEHQRYFVVYNQEKQLLPFFVSVR 301 Query: 308 NIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQ 367 N + +GN +V+ ARLEDAL F++ D L P+ Sbjct: 302 NG-NDYMIENVAKGNQKVLTARLEDALFFYEED--------------------LKIPMTT 340 Query: 368 RMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLCT 424 + +L+ L+ FHAKIG+ E++ R+++L +IA+ ++ RA + K DL T Sbjct: 341 FLKKLETLN--FHAKIGSMTEKMDRVQLLVGRIAKELNLPSDVVVTAQRAASIYKFDLVT 398 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 +V EFPELQG +G+ YA+ Q E AI EH P +P++ +++ADKLD Sbjct: 399 NMVGEFPELQGIMGEIYALKQGETPEVAQAIREHYMPTSADGELPSSVPGALLAVADKLD 458 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------------- 530 T ++F A P+GS DPYALRR +G+++I+ +I + F + Sbjct: 459 TFLSFTAAGMLPTGSNDPYALRRQVMGLVQILAAFDWNIEIEDFTKLLLGLDYAEFLSGK 518 Query: 531 ----DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 ++ ++ F +R+ + RHD+I+AI+ ++ + K L+ S + Sbjct: 519 EEEVEEFILSFIRERVAQRIATITKRHDIIDAIVNSHTSSVPEQLKAAKVLSAVSESEEF 578 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + + R+ I A K + S EI L E+E+ L I + + +Q + Sbjct: 579 KGITEALNRVINISA---KAQDDASGEILEDRLETESERTLVKAIKELHSKVQTLTPEEL 635 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ I FF++ +V VDD R NRL L + IIL + + ++ Sbjct: 636 Y----SHLEAMAPKINDFFNENMVMVDDEATRRNRLRFLGLLSEIILDLADFTSLI 687 >gi|260891272|ref|ZP_05902535.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia hofstadii F0254] gi|260858948|gb|EEX73448.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia hofstadii F0254] Length = 678 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 200/723 (27%), Positives = 352/723 (48%), Gaps = 73/723 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI EE+PAR +A +DL I+ LK E + + + + TP R+ +K L+ Sbjct: 2 NFLFEIGLEELPARYVDQAEKDLKKIIENELKAERIKFSGIESFSTPRRVTAIIKDLAEK 61 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + ++ +GP V G KA +GF++S G ++ + KG Sbjct: 62 QDDLDKKSVGPSVEIAYKEGQLTKAGEGFVKSQGATIDDIKIVENE--KGKYISIEKFIA 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++L I+ AI+K+ + KSM+W+ F ++RP+K + + +I+ Sbjct: 120 GKNTREILPEILKNAIKKIEFEKSMKWADR-----TFRFVRPIKWFVTLFD----NGEIL 170 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + + GN T G R+ A I++ + Y + + E V++D E RR IL Sbjct: 171 PFEFEGLKGGNKTRGMRYFASQDIEINNPLDYEKIMLENFVIVDGEKRREEILKSIRENG 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G + +K LL+E++ +VE+ G F K YL LPE++I +T++T+Q+ F + ++ Sbjct: 231 EKDGDTAIINKYLLDEVVNVVEYPYAIKGEFSKDYLKLPEDIITITLETHQRYFPVKDKD 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L+N FI++ N A + + +GN +VV RL DA F+ D Sbjct: 291 GKLSNKFIVIRN--APEYSETVKKGNEKVVEPRLADAKFFFDED---------------- 332 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L + +L +V F +GT E+V R + + + ++ + + R Sbjct: 333 ----LKNKFADNVEKLK--EVTFQKDMGTIFEKVKRSEKIAEYLISELNLNDKKKNIIRT 386 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ +EF +LQG +G YA Q E+ I EH PR + +PT Sbjct: 387 VDLAKADLVSNVIGEKEFTKLQGFMGSVYAEKQGEDKDVALGIFEHYLPRYQGDELPTTV 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 +ADK+DT+I +A+ KP+ SKDPYALRRAT GII++ L +K+ + IE Sbjct: 447 EGAIAGIADKMDTIIGCFAVGLKPTSSKDPYALRRATQGIIQVTLNSKLSFDYKKLIEKA 506 Query: 532 ----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +++ FF R+ L ++ + DLI + E+ N++ + + Sbjct: 507 YEIFSADKKVLEKDVVKDVTEFFKQRIINVLSEK-YQKDLINYEINLES-NVVELDKKLS 564 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L + + E + KR+ I+ E+ +N L I LE EK L+ + + Sbjct: 565 ELLKLSQTENFEILINLLKRVKNIVKDEKNEN----LNIDSTLFELEEEKTLHNLANQL- 619 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ES+++ + + L + I FFD V++NVD++++++NR++LL+ ++ I + Sbjct: 620 ----ESIENTDFSNYIETLLNNASTINQFFDNVIINVDNKKLKENRIALLKKLEISIDKM 675 Query: 696 INV 698 IN+ Sbjct: 676 INI 678 >gi|57168130|ref|ZP_00367269.1| glycyl-tRNA synthetase, beta subunit [Campylobacter coli RM2228] gi|57020504|gb|EAL57173.1| glycyl-tRNA synthetase, beta subunit [Campylobacter coli RM2228] Length = 664 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 186/718 (25%), Positives = 337/718 (46%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L++ ++ + + Y+TP RL ++ + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKDVLEDYRLV-SDFKFYYTPRRLVIFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ G+ K+ K +V Sbjct: 60 SKQEDSFAEFIGAPKNVAYKDGQLSAAGQSFLQKAGISENELSF--KEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 ++VL ++ ++ + + KSMRW ++F +IR ++SI+CIL + Sbjct: 118 IKGLQSQEVLGEMIHQFLKSLNFGKSMRWG-----TNSFEFIRAIRSIVCIL-----DDN 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + + T+ HR + + + Y LE+ ++LDP R+ IL Sbjct: 168 LVEFESYGVKSAKKTFIHRSVSYDLQEFNNAKEYFSLLEKNYIILDPLQRKERILKQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L S +++ ED++LL E+I + E+ +GSF+++YL +P E+I +++ NQ+ F Sbjct: 228 LESQNNIQIGEDEELLAEVIAITEYPNALLGSFEEEYLQIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D I+ GN RV+ ARL DA+ F++ D + N Sbjct: 288 EKG-LSNHFIVVSNAVCEDYSK-IIHGNERVLRARLSDAMFFYQNDLQSGLNPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LVDR 413 + + + +GT ++ R + + + Q+++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEVLCQMLNNDKIANIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 AI +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 AIKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----- 528 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L + + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQALLEKLA 501 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + Q L F +RL + + I+A+L ++ +L+ I +K L E Sbjct: 502 SHYKNFDMQILKDFIFERLYTFYS---VNASFIKAVLSSKSTDLIHINQSVKALIELSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 A ++ + KR+ I S ++ + EAE +LY + + Sbjct: 559 ANFQENFTTFKRLANIANK-------TSHKVDENLFVEEAENKLYKAFKE-------KIQ 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L S+ I+ FFD+V++N D ++++NR +L+ I L + +++++ Sbjct: 605 AHSLQEKLENLFSLKPFIDEFFDKVMINAKDEKLKNNRQALIYEIYEEFLKIADLKEL 662 >gi|21905215|gb|AAM80078.1| putative glycyl-tRNA synthetase beta subunit [Streptococcus pyogenes MGAS315] Length = 650 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 195/698 (27%), Positives = 334/698 (47%), Gaps = 76/698 (10%) Query: 29 LIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV-------GAGKKA 81 + L E + +++++ + TP RL + + GL+ + E+ GP G KA Sbjct: 1 MATFLTENRLSFEDIQTFSTPRRLAVRVSGLAAQQTDLTEDFKGPAKKIALDADGNFSKA 60 Query: 82 IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLKTIVPVAIQKVPWPKS 140 GF+R GL T + I+ KG+ Y+ V + + ++VL V + + +P S Sbjct: 61 AQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLLG-VTEVLSAMTFPVS 116 Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 M W+ ++F +IRP+ ++ +L ++ ++LD +I G ++ GHRF Sbjct: 117 MHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHSGRVSRGHRFLGTET- 165 Query: 201 KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWV 260 + S D Y DL V+ D + R+ I+ + +A G+++ D DLL E++ LVE+ Sbjct: 166 TITSADSYEADLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDIDADLLNEVLNLVEFP 225 Query: 261 QVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQ 320 FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L F+ V N +++ Sbjct: 226 TAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGHLMPNFVSVRNG-NDQAIENVIK 284 Query: 321 GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFH 380 GN +V+ ARLED FW+ DQ + +A+L +V FH Sbjct: 285 GNEKVLVARLEDGEFFWREDQKLQ--------------------IADLVAKL--TNVTFH 322 Query: 381 AKIGTQGERVSRIRVLGKKIAQLIDADVALV---DRAIVLSKADLCTEIVREFPELQGKI 437 KIG+ E + R RV+ +A+ + V DRA + K DL T +V EF ELQG + Sbjct: 323 EKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDLLTGMVGEFDELQGIM 382 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G++YA L E+ + AI EH P +P K+ ++LADKLDTL++F+++ PS Sbjct: 383 GEKYARLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADKLDTLLSFFSVGLIPS 442 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------DQNLILFFHDRLK 543 GS DPYALRRAT GI+RI+ IP+ + ++ +++ F R+ Sbjct: 443 GSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTYANKADVMNFIRARVD 502 Query: 544 LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 + + + D+ EA+L + ++ + L + + + + S R F + Sbjct: 503 KMM-GKAVPKDIREAVLESSTFVVPEMLAAAEALVKASHTENYKPAVESLSRAFNLAEKA 561 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 + S+ + P E E L+A I + Q + + + I Sbjct: 562 -----DASVHVDPSLFENEQENTLFAAIQGLTLAGSAA-------QQLEQVFVLSPVIND 609 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD +V +D+ +++NRL++L + + + ++ Sbjct: 610 FFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 647 >gi|305431720|ref|ZP_07400888.1| glycyl-tRNA synthetase beta subunit [Campylobacter coli JV20] gi|304445202|gb|EFM37847.1| glycyl-tRNA synthetase beta subunit [Campylobacter coli JV20] Length = 664 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 187/718 (26%), Positives = 337/718 (46%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L++ ++ + + Y+TP RL ++ K + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKDVLEDYRLV-SDFKFYYTPRRLVIFHKNFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ G+ K+ K +V Sbjct: 60 SKQEDSFAEFIGAPKNVAYKDGQLSAAGQSFLQKAGISENELSF--KEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 ++VL ++ ++ + + KSMRW ++F +IR ++SI+CIL + Sbjct: 118 IKGLQSQEVLGEMIHQFLKSLNFGKSMRWGA-----NSFEFIRAIRSIVCIL-----DDN 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + + T+ HR + + + Y LE+ ++LDP R+ IL Sbjct: 168 LVEFESYGVKSAKKTFIHRSVSYDLQEFNNAKEYFSLLEKNYIILDPLQRKERILKQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L S +++ ED++LL E+I + E+ +GSF+++YL +P E+I +++ NQ+ F Sbjct: 228 LESQNNIQIGEDEELLAEVIAITEYPNALLGSFEEEYLQIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D I+ GN RV+ ARL DA+ F++ D + N Sbjct: 288 EKG-LSNHFIVVSNAVCEDYSK-IIHGNERVLRARLSDAMFFYQNDLQSGLNPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LVDR 413 + + + +GT ++ R + + + Q+++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEVLCQMLNNDKIANIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 AI +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 AIKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----- 528 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L + + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQALLEKLA 501 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + Q L F +RL + + I+A+L ++ +L+ I +K L E Sbjct: 502 SHYKNFDMQILKDFIFERLYTFYS---VNASFIKAVLSSKSTDLIHINQSVKALIELSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 A ++ + KR+ I S ++ + EAE +LY + + Sbjct: 559 ANFQENFTTFKRLANIANK-------TSHKVDENLFVEEAENKLYKAFKE-------KIQ 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L S+ I+ FFD+V++N D ++++NR +L+ I L + +++++ Sbjct: 605 AHSLQEKLENLFSLKPFIDEFFDKVMINAKDEKLKNNRQALIYEIYEEFLKIADLKEL 662 >gi|33591304|ref|NP_878948.1| glycyl-tRNA synthetase beta chain [Bordetella pertussis Tohama I] gi|33570946|emb|CAE40413.1| glycyl-tRNA synthetase beta chain [Bordetella pertussis Tohama I] gi|332380706|gb|AEE65553.1| glycyl-tRNA synthetase beta chain [Bordetella pertussis CS] Length = 712 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 189/738 (25%), Positives = 326/738 (44%), Gaps = 75/738 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + K + + + L ++ + + TP RL + L + Sbjct: 8 LLIELFTEELPPKALQKLGQAFAEGVRATLARHHLLADGCAVEPFATPRRLAVRLSAVLA 67 Query: 62 HSPEKI-EERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVL 113 +PE+ E+L P G A+ L + GL+ + ++++ K + +A Sbjct: 68 QAPEQAYAEKLMPVKVGLDANGQPTAALAKKLAAKGLEGLDPATLERESDGKQEYLVARG 127 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + L+ + AI +P PK MR+ + ++RP ++ + A+ Sbjct: 128 TAAGAQLAVGLQEGLDAAIDGLPIPKVMRYQLADGQ-TTVKFVRPAHGLVALFGAD---- 182 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDA 232 I+ + + G T GHRF + I++ + Y DL E V+ E RR I Sbjct: 183 -IVPIAALGLQAGRATQGHRFQSNGAIELATAQGYEADLAERGRVIASFEARRAEISRLL 241 Query: 233 HRLASAVGLELVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A +G L +D + LL+E+ LVE V++G F++++L +P+E + LT++ NQK Sbjct: 242 DEHAQRLGATLGDDPEVTALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTMRLNQKY 301 Query: 290 FVTRTR-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L + F++VSN+Q +D A IV+GN RVV RL DA F++ D+ Sbjct: 302 FPLFDPASGKLTHRFLIVSNMQVAD-PANIVEGNQRVVRPRLADAQFFFETDR------- 353 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 PL R+ +L +V+H K+GTQ ERV R+R + + IA + D Sbjct: 354 -------------KTPLAARVEQLG--SIVYHNKLGTQLERVERVRAIARGIATALGGDA 398 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A DRA +L+KADL + +V EFPELQG +G YA E A+ + R Sbjct: 399 AHCDRAALLAKADLGSNMVGEFPELQGIMGAYYAQGDGEPADVVTALRTQYRNRYDAPVD 458 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII---RIILENKI---- 521 + T+ +A++++TL+ W+I P+G +DP+ LRRA LG+I + Sbjct: 459 AATLTAATLFIAERIETLVGIWSIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKVS 518 Query: 522 ---DIPLSQF---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + L + F ++R + L R + +EA++ Sbjct: 519 EDGPLSLDGLLALAAQAFPDGKIGADTLAEVRAFIYERYRNQLIGEHDR-NAVEAVIALA 577 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 L + ++ + F + KRI +L E + + L A Sbjct: 578 P-PLHQVAARVRAVAAFAQLPAAASLAAANKRIGNLLKKAEGE----IGAVDAALLQDPA 632 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK L ++ + + + L EP++ FF V+V DD +R NRL+ Sbjct: 633 EKALAEAVAQLRPQARAQLQAGDFAASLATLAQAREPVDAFFADVMVMADDAALRANRLA 692 Query: 684 LLQYIKNIILIVINVQKI 701 LL + ++ V ++ ++ Sbjct: 693 LLGQLHGLMNQVADISRL 710 >gi|187250603|ref|YP_001875085.1| glycyl-tRNA synthetase subunit beta [Elusimicrobium minutum Pei191] gi|186970763|gb|ACC97748.1| Glycyl-tRNA synthetase, beta subunit [Elusimicrobium minutum Pei191] Length = 687 Score = 485 bits (1249), Expect = e-134, Method: Composition-based stats. Identities = 171/725 (23%), Positives = 308/725 (42%), Gaps = 63/725 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LLEI E +PAR A + + + + Y ++R + T ++ L+++GL Sbjct: 1 MKNALLEIGVEHLPARFVEGALRQMEALAAEQFAKYNISYASLRAFGTFRKIALHIEGLE 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P S + +E GP G GF + G++ ++ G A + Sbjct: 61 PKSKDISKEIKGPPAKLLKDANGNFTPQSAGFAQKNGIKPEKLSVVE--TPNGPFIYAKI 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +L I + + +PK+M W S + RP+++++ + + Sbjct: 119 KIKGEATKKLLPQIFTNIVTSLQFPKNMVW-----EESGLRFARPIRTLIGLY-----GD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL--EEAMVLLDPECRRNAILND 231 +I + + G T+ IK+ S D YI L + +L +PE R+ + Sbjct: 169 AVIKFKVAGVESGRTTWPLSSFGTKGIKIASADSYIETLKNQPQPILAEPEERKEVLAKA 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + L V +DLL E + + E G F+ ++L LP+ELI +K K F Sbjct: 229 IAKEGELRNLTSVISEDLLNETVYMTEHPVAVPGDFEIRFLTLPKELIITVLKKQIKMFH 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++G + FI V + + + + +G +V++ARL DA+ F+ +D N N Sbjct: 289 MVNKDGGIEPYFIAVRDGMSVNQQEVM-EGFKKVMSARLSDAIFFYNQDLNKGLNAF--- 344 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + + V F +GT ++ R + L +A+ A +V Sbjct: 345 -------------------KEKLATVRFIDGLGTMLDKTERTKKLALWLAEKCGAKKDIV 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +A ADL + +V EFPELQG +G YA+ +N+ A+EE P +P+ Sbjct: 386 GQAADYCYADLTSSVVYEFPELQGYMGGVYALKENKPTETAKALEEFYFPLTSTSELPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 S VSLA K+D + + + P+GS+DP+ALRR +GI+R++L+ + I + ++ Sbjct: 446 LESAIVSLAGKMDAVTGNFLTGQIPTGSEDPFALRRQAIGIVRMMLDYNMPIAPKELVDY 505 Query: 532 Q------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L F R+ L + I +I + + + K L Sbjct: 506 SVKLYEKETDVYCALEAFLDARMSNLLENESIDTKVIMCVSGNAAKPFTHTLQVAKALQN 565 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI- 638 + + SAKR+ IL E + ++ +AE+ L + + Sbjct: 566 MKENEDLKTVGESAKRVINILKKAEFD----AASVNSTLFEHDAERNLLTAVEKTEKELI 621 Query: 639 --QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +++ K +I LL + FFD V+VN D E+R NRL+LL +++ ++ Sbjct: 622 KYNKTLTVKDCEEIFALLAGFKGELASFFDSVMVNSDKEEIRKNRLNLLNKTASLLTVIA 681 Query: 697 NVQKI 701 ++ K+ Sbjct: 682 DITKL 686 >gi|239948186|ref|ZP_04699939.1| glycyl-tRNA synthetase, beta subunit [Rickettsia endosymbiont of Ixodes scapularis] gi|239922462|gb|EER22486.1| glycyl-tRNA synthetase, beta subunit [Rickettsia endosymbiont of Ixodes scapularis] Length = 664 Score = 485 bits (1249), Expect = e-134, Method: Composition-based stats. Identities = 228/702 (32%), Positives = 347/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ L + K E G Sbjct: 13 IPALMQKNAEEGYLNIFTKIFEENEI-FAKVQVFAGPRRIMLHATHLPKVTLSKELEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 72 PSTEAPEAAINGFCKAHNVSKLELST--KLINNQLYYFFVKKTEEREIKEILPEIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E ++ L + NITYGH Sbjct: 130 NKYSWAKSMFWGNYK-----IKWIRPLRNILCIFDGE-----VLPLQFGHLTANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I + LA++ L + ED L+EE Sbjct: 180 RLTDNKKLEVTDFEDYRNKLLENHVILERTKREEVIKSGLLELANSHNLNIKEDNRLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LP+E++ +++T QK F + G A F+ VSN + + Sbjct: 240 VAGLSEFPVVLLGKIPQKFLELPKEVLISSMRTXQKYFCLFDKTGNFAPYFLFVSNGRFA 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + +++GN +V++ARL DAL+F+K+D ++K L+ R+ +L Sbjct: 300 NT-DLVIKGNEKVLSARLSDALYFYKQD--------------------IAKTLESRLGKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHA++G E+V RI + K IA + + L K+DL +E+VREFPE Sbjct: 339 E--AVTFHAELGKLREKVERITKICKHIAP----NNKDLITVAKLCKSDLVSEMVREFPE 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI++H KPRG +NVP+ ++LADKLD+L+ Sbjct: 393 LQGIMGYYYAKHEGLNEEVATAIKDHYKPRGLNDNVPSRNA-ALLALADKLDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-------------LILFFH 539 E P+GS DPYALRR LGIIRIILENK+++ L+ I +I FF Sbjct: 452 GEAPTGSGDPYALRRQALGIIRIILENKLELHLNSLINFSINLYKDSSDKNKDLIISFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R+K Y D LI A+L NL+ + L EF G + L + +R I Sbjct: 512 ERVKFYFK-NDYDIALINAVLDL---NLVDTKFKLDALKEFLIEDAGRQLLNAYRRASNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + ++I + + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 568 I-----DGQKIIGLVDASLFITQPEKELFEVIQKISPQIIDSIADKDYKRALNLLSSLLT 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ + + ++ Sbjct: 623 PITSFFDNVLVNDSDSKIAQNRLSLLQNTCELFHKIAKFNRL 664 >gi|170288528|ref|YP_001738766.1| glycyl-tRNA synthetase, beta subunit [Thermotoga sp. RQ2] gi|238688825|sp|B1L9T5|SYGB_THESQ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|170176031|gb|ACB09083.1| glycyl-tRNA synthetase, beta subunit [Thermotoga sp. RQ2] Length = 672 Score = 485 bits (1248), Expect = e-134, Method: Composition-based stats. Identities = 174/723 (24%), Positives = 323/723 (44%), Gaps = 77/723 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA H L LLK + ++ + R + L L Sbjct: 1 MRTALLEVGLEELPASEFHSILRQLEEKSAELLKAYRISSGSVEVFVGSRRFGVILNNLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EE+ GP + G +A++GFLR+ ++ + Sbjct: 61 ERQEDFTEEKKGPPLNIAYDENGKPTRALEGFLRNNNAS------LENVVHREGYVYLSR 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +E+VL + + + + K MRW + ++RP+ I+ + Sbjct: 115 VVEGKPVEEVLPDLFRDLVLGLNFRKPMRWGSGEH-----EYVRPVHWIVAM-----VDG 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++DL++ + I+YG R+HA I++ + Y L++ V+ R+ +L Sbjct: 165 RVLDLEIFGLRSSRISYGKRYHA-GSIEIPDPERYYESLKKGFVISSHLERKKFVLEQID 223 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 G+++ D++L+EEI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ F+ Sbjct: 224 EFEKRSGMKIERDEELIEEIVAITEYPRIVVGQFDRKYLELPEEIIVTAVKHHQRSFIAH 283 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L N F+ + +V+G RV+ ARLEDA +++++D Sbjct: 284 KET--LTNIFVAFQDGP--QPPENVVKGYERVINARLEDARYYFQKD------------- 326 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L L++ +L ++VF K+GT ++V RI+ + +++ + + + Sbjct: 327 -------LETSLEKMNEKLK--EIVFQEKLGTLYDKVERIKKISQRLCEDLKLPEMFTQK 377 Query: 414 ---AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 A + KAD+ +++V EFPELQG +G+ YA+ + N AIE+H P Sbjct: 378 VLEAASICKADIASKVVYEFPELQGVMGRIYALREGINEEIATAIEDHY------SEEPQ 431 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I + +AD++DT++ +AI P+ SKDPY L+ I RII +N+ DI L + + Sbjct: 432 TVIGSILGIADRIDTIVGNFAIGNVPTSSKDPYGLKSKADTIFRIIRKNEWDISLEELLT 491 Query: 531 D----------QNLILFFHDRLKLY-LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + L FF R + +++ I D+ A+ L I+ + L E Sbjct: 492 FASSLVKYHLSEELETFFAGRFYQFLINELGISFDVARAVNHLWKKPLRGILS-AEALQE 550 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + + +R+ I + S + E EK+L + + Sbjct: 551 ISEKPEFQDLFVGFERVHNITKNHD------STKFDGALFEKEEEKKLMNKFYEVKEKVL 604 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++++ Y + L + I+ +FD V V V ++R NRLS L+ I + ++V ++ Sbjct: 605 KALERLNYREALQYLIELKPYIDEYFDNVFVMVKRDDLRVNRLSFLKNIDELFMMVGDMT 664 Query: 700 KIV 702 +V Sbjct: 665 YLV 667 >gi|154173823|ref|YP_001408091.1| glycyl-tRNA synthetase subunit beta [Campylobacter curvus 525.92] gi|112803116|gb|EAU00460.1| glycyl-tRNA synthetase, beta subunit [Campylobacter curvus 525.92] Length = 673 Score = 484 bits (1247), Expect = e-134, Method: Composition-based stats. Identities = 188/716 (26%), Positives = 330/716 (46%), Gaps = 63/716 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D L+EI EE+PA + ++ +L E + + Y+TP RL + + + Sbjct: 3 KDILIEIGVEELPAIPFLRELPNIEAKWRAVLAEYKLE-SEFKFYYTPRRLVFFHENFAL 61 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + P+ + E +G GA +A F + G+ K+ +V + Sbjct: 62 NQPDSVAEFIGAPKQVAIKDGAFTQAALSFAKKCGIDESELKF--KEIGGKEVLYYERQL 119 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + + + KSMRW + F +IRP++S LC+ E + Sbjct: 120 KGEASVKLFGDMIEKFLLSLNFGKSMRWGSGE-----FEFIRPIRSFLCLFGGE-----V 169 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + + GN TY HR + V S D Y + ++LD RR+ IL L Sbjct: 170 VKFNKFGVESGNGTYPHRSISYDKSLVNSADEYFSGMRARGIVLDASERRSIILAQFKEL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 G+++ D+DLL+E++ + E+ +G F+ ++L +P E+I ++K NQ+ F + Sbjct: 230 -EKGGIDIQIDEDLLDEVVAITEYPTALLGEFEAEFLEVPSEVIITSMKENQRYFPVF-K 287 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L+N F++VSN A D GA IV+GN +V+ ARL DA+ FW+ D + LK Sbjct: 288 NGKLSNHFVVVSNALAKD-GALIVKGNEKVLRARLSDAMFFWRSDLKAEFSPDKLKNITY 346 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L + R A++ ++ E + V A+L +RA+ Sbjct: 347 LKELGSLYDKELREAKIA-------DELANLYENELKDEVGAGFRAKL--------NRAV 391 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL T++V EF ELQG +G YA + E AI E P P++ S Sbjct: 392 MLAKADLTTQMVYEFTELQGVMGAYYARAKGEEDVIVTAIREQYLPDSEDAPCPSSVFSS 451 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-- 533 V+LA+KLDTLI +++ + PSG+KDP+ALRRA G+I+I+L + + +S ++ + Sbjct: 452 VVALANKLDTLIGLFSVGKIPSGTKDPFALRRAANGVIKIVLAHGLKFDISSVLKSLSAQ 511 Query: 534 --------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 L F DRL + D +++A + + ++L + ++ ++E S Sbjct: 512 YKSFDLGLLENFILDRLYTFF---DTNPSIVKACINSDKRDILQLTKAVEAMSEISSKPN 568 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 ++ + KR+ I+ + + L E+ L D Sbjct: 569 FKELFSTFKRLANIIKDVD------VGTVDENLLQTSEERALNEGFKALK-------DSP 615 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L + I+ FFD+V++NVDD +R NR++++ I L + ++++I Sbjct: 616 DHKACLNELFGLKGEIDAFFDKVMINVDDENIRKNRIAVIGQIYKSFLEIADIKEI 671 >gi|33603064|ref|NP_890624.1| glycyl-tRNA synthetase beta chain [Bordetella bronchiseptica RB50] gi|33568695|emb|CAE34453.1| glycyl-tRNA synthetase beta chain [Bordetella bronchiseptica RB50] Length = 712 Score = 484 bits (1247), Expect = e-134, Method: Composition-based stats. Identities = 189/738 (25%), Positives = 326/738 (44%), Gaps = 75/738 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + K + + + L ++ + + TP RL + L + Sbjct: 8 LLVELFTEELPPKALQKLGQAFAEGVRATLARHHLLADGCAVEPFATPRRLAVRLSAVLA 67 Query: 62 HSPEKI-EERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVL 113 +PE+ E+L P G A+ L + GL+ + ++++ K + +A Sbjct: 68 QAPEQAYAEKLMPVKVGLDANGQPTAALAKKLAAKGLEGLDPATLERESDGKQEYLVARG 127 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + L+ + AI +P PK MR+ + ++RP ++ + A+ Sbjct: 128 TAAGAQLAVGLQEGLDAAIDGLPIPKVMRYQLADGQ-TTVKFVRPAHGLVALFGAD---- 182 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDA 232 I+ + + G T GHRF + I++ + Y DL E V+ E RR I Sbjct: 183 -IVPIAALGLQAGRATQGHRFQSNGAIELATAQGYEADLAERGRVIASFEARRAEISRLL 241 Query: 233 HRLASAVGLELVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A +G L +D + LL+E+ LVE V++G F++++L +P+E + LT++ NQK Sbjct: 242 DEHAQRLGATLGDDPEVTALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTMRLNQKY 301 Query: 290 FVTRTR-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L + F++VSN+Q +D A IV+GN RVV RL DA F++ D+ Sbjct: 302 FPLFDPASGKLTHRFLIVSNMQVAD-PANIVEGNQRVVRPRLADAQFFFETDR------- 353 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 PL R+ +L +V+H K+GTQ ERV R+R + + IA + D Sbjct: 354 -------------KTPLAARVEQLG--SIVYHNKLGTQLERVERVRAIARGIATALGGDA 398 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A DRA +L+KADL + +V EFPELQG +G YA E A+ + R Sbjct: 399 AHCDRAALLAKADLGSNMVGEFPELQGIMGAYYAQGDGEPADVVTALRTQYRNRYDAPVD 458 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII---RIILENKI---- 521 + T+ +A++++TL+ W+I P+G +DP+ LRRA LG+I + Sbjct: 459 AATLTAATLFIAERIETLVGIWSIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKVS 518 Query: 522 ---DIPLSQF---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + L + F ++R + L R + +EA++ Sbjct: 519 EDGPLSLDGLLALAAQAFPDGKIGADTLAEVRAFIYERYRNQLIGEHDR-NAVEAVIALA 577 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 L + ++ + F + KRI +L E + + L A Sbjct: 578 P-PLHQVAARVRAVAAFAQLPAAASLAAANKRIGNLLKKAEGE----IGAVDAALLQDPA 632 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK L ++ + + + L EP++ FF V+V DD +R NRL+ Sbjct: 633 EKALAEAVAQLRPQARAQLQAGDFAASLATLAQAREPVDAFFADVMVMADDAALRANRLA 692 Query: 684 LLQYIKNIILIVINVQKI 701 LL + ++ V ++ ++ Sbjct: 693 LLGQLHGLMNQVADISRL 710 >gi|171778117|ref|ZP_02919374.1| hypothetical protein STRINF_00209 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283099|gb|EDT48523.1| hypothetical protein STRINF_00209 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 679 Score = 484 bits (1247), Expect = e-134, Method: Composition-based stats. Identities = 196/713 (27%), Positives = 339/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLKEKRLAFEGIQTFSTPRRLAVRVLGLADAQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDAEGNFTKAAQGFVRGKGLTTDD---IEFREVKGEEYVYVTKHEAGKAAKEVLV 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P +M W+ + F +IRP+ ++ +L E +I Sbjct: 132 D-IPEILSVMTFPVNMHWAN-----NTFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF ++ + D Y DL + V+ D + R++ I+N + A + + Sbjct: 181 GRVSRGHRFLGHET-EITTADSYEEDLRKVFVIADAKERQDMIVNQIKAIEKAQNVRVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +G L FI Sbjct: 240 DDELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDLDGNLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNG-NENHIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---RAIVLSKADL 422 +A+LD +V FH KIG+ E + R +V+ +A+ A RA + K DL Sbjct: 339 ADLVAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEENKALARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + +++ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELVDNLYALSFDSLTY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R++ + ++ + D+ EA+L N + +++ L E + + Sbjct: 517 EHKAEVMDFIRARVEKMM-NKSVSKDIKEAVLAGSNFVVAEMLEAADALVEASKAEGYKA 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R+F + + + + + EK L +D S Sbjct: 576 AVESLSRVFNLAEKAQ-----AGVAVDANLFENDEEKALAQAAADLNLTGSASDK----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V VD+ V++NRL++L + V K+ Sbjct: 626 --LAQLFALSSVIDKFFDNTMVMVDNEAVKNNRLAILAELTAKASSVAAFNKL 676 >gi|225869069|ref|YP_002745017.1| glycyl-tRNA synthetase beta chain [Streptococcus equi subsp. zooepidemicus] gi|259511932|sp|C0MDQ3|SYGB_STRS7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225702345|emb|CAX00162.1| glycyl-tRNA synthetase beta chain [Streptococcus equi subsp. zooepidemicus] Length = 679 Score = 484 bits (1247), Expect = e-134, Method: Composition-based stats. Identities = 196/713 (27%), Positives = 325/713 (45%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK+ + Y + + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLVQRMADFLKDNRLSYDAIEGFSTPRRLAVRVLGLADQQTDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + + VL Sbjct: 75 SKKIALDADGQFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKQAKGVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ ++F +IRP+ S++ +L ++ ++LD +I Sbjct: 132 A-VPEVLASLTFPVSMHWAN-----NSFDYIRPVHSLIVLL-----DDEPLELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G I+ GHRF + S D Y DL V+ + R+ I+ + + +++ Sbjct: 181 GRISRGHRFLGEET-SITSADSYEADLRSQFVIASAKERQEMIIAQIRAIEAEQKVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DEDLLNEVLNLVEYPTAFMGSFDPKYLEIPEEVLVTSMKNHQRYFVVRDQAGKLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNAKH-LQNVIKGNEKVLVARLEDGEFFWREDQKLF--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L V FH KIG+ E + R +V+ +A A+ + V RA + K DL Sbjct: 339 EDLVAKL--AHVTFHEKIGSLAEHMDRTKVIAAFLADQAGLSEAEKSAVARAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEAAAVATAIREHYLPDSAEGELPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEHFGWSIPMDKLIDSLYELSFESLTY 516 Query: 529 IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + I D+ EA+L + + ++ + L + Sbjct: 517 QHKAEVLDFICARVDKMMGS-AIPKDIREAVLASSSFVVPELLARAEALAAASQLDTYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R+F + I + E+ L + + Sbjct: 576 AVESLSRVFNLAKKAVDAVL-----IDASLFENDYERALAQAVDSL-------VLSGSAK 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I+ FFD +V +D +R NRL+LL + + + ++ Sbjct: 624 EQLAQVFALSPVIDDFFDHTMVMTEDEAIRCNRLALLAELVKKVETIAAFDRL 676 >gi|148242367|ref|YP_001227524.1| glycyl-tRNA synthetase beta subunit [Synechococcus sp. RCC307] gi|147850677|emb|CAK28171.1| Glycyl-tRNA synthetase beta subunit [Synechococcus sp. RCC307] Length = 737 Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats. Identities = 184/750 (24%), Positives = 320/750 (42%), Gaps = 83/750 (11%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLEI +EE+PA + L ++ L E+ + + + TP R+ + + GL+P Sbjct: 19 ASFLLEIGTEELPADFAAQVLAQLEPMVRRDLSEKRLACEGLSCTSTPRRIAVCIDGLAP 78 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + EER GP G KA GF + GLQ ++ KG A + + Sbjct: 79 SASDLQEERKGPPAAQAFQDGMPTKAALGFAQRCGLQPEELEI--RETPKGPFVFASVLE 136 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R D+L ++P I + + MRW + RP++ ++ +L E E Sbjct: 137 KGRQASDLLAELIPGWIAALQGRRFMRWGAGER-----RFSRPIRWLVALLD-EQVVELS 190 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ + G ++GHR A + + + Y L A V+++ + RR I + Sbjct: 191 LEGSDPPVQSGRTSFGHRLVA-AEVSIPAASAYGDCLACAGVMVNRQQRRQLIADAIAAA 249 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-- 293 AS +LLEE+ LVE + G+ D L LP E++ ++++Q+ Sbjct: 250 ASKRDARADLPDELLEELTDLVERPSLIEGAIDDGSLDLPAEVLSTVMRSHQRYVPLYRR 309 Query: 294 ---------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 G L F+ ++N +I +GN RV+ ARL DA F D+ Sbjct: 310 SAEVDPLSLQARGCLLPQFLCIANGL-DGAEDSIRRGNERVLKARLADAAFFLDADRAVA 368 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG---KKIA 401 +QR A+L V F +G+ +R R+ L + Sbjct: 369 S--------------------EQRRAQLSR--VTFAEGLGSLLDRCERLEWLAQTLGRCL 406 Query: 402 QLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 L A A R L K DL +++V EFPELQG +G +Y + + E S A++EH P Sbjct: 407 ALDAAAQADACRGAHLCKHDLVSQMVGEFPELQGLMGGKYLLAEGEPASVALAVQEHYLP 466 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 RG + +P++ V+LA++L+ L++ +A ++P+GS DPYALRRA GI++I+ E + Sbjct: 467 RGADDVLPSSDAGAVVALAERLELLLSIFAKGQRPTGSSDPYALRRAGNGILQILWERQW 526 Query: 522 DIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 + L ++ +L F RL L ++ DL++A+ Sbjct: 527 RLDLQDLLQQACNHWAELLPGFAIDASQLQADLQEFLRQRLISQLEEQGEAVDLVQAVTP 586 Query: 562 PEND-----NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--I 614 + + L +D ++ L + S+ + +R ++ + +S + Sbjct: 587 QSANQRLLRDPLDALDRLRLLEQLRSAGELAPVQAVVQRAVRLAEKGDLAADVLSSTGVV 646 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVN 671 +E + V+ + + + Y ++ + L + + FFD V+V Sbjct: 647 DASLFEQPSEAAMLKVVDQLSGIVGQQGADR-YSKLCEALAASSSTLAAFFDGDTSVMVM 705 Query: 672 VDDREVRDNRLSLLQYIKNIILIVINVQKI 701 DD VR NRL+LL + N ++ + I Sbjct: 706 ADDMAVRRNRLNLLAVLGNQAAVLADFAAI 735 >gi|328955469|ref|YP_004372802.1| glycyl-tRNA synthetase beta chain [Coriobacterium glomerans PW2] gi|328455793|gb|AEB06987.1| glycyl-tRNA synthetase beta chain [Coriobacterium glomerans PW2] Length = 698 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 197/729 (27%), Positives = 321/729 (44%), Gaps = 74/729 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L+E+ EE+PA ++A ++ L + G+ + +R P R+ + + ++ Sbjct: 5 DYLIELGCEELPAHPLYRACAQFGDLIERGLADAGLAHGPVRTLCAPRRMAVIVADVAAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E + GP GA KA +GF R +T + +D D + Sbjct: 65 TEEVCQSLRGPAAAIAFDSTGAPTKAAEGFARGRNARTAD--LVVRDDGGRDYVFLDVWC 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R D+L VP AI +V WP+S RW + RP++ ++ +L + + Sbjct: 123 PPRSARDILADAVPSAIARVSWPRSQRWGRR-----PERFARPIRWLVSLL-----GDTV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G T G R P ++ D Y R LE+A V++D RR+ I H + Sbjct: 173 VPFSFAGVEAGRRTRGLRVLGVEP-ELSCADAYERTLEDAGVIVDARRRRDIIERGVHEI 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 +G + + EE++ LVE+ +V GSFD+ +L +P E+I ++ +NQ+ F Sbjct: 232 ERDLGARADMPRKVFEEVVNLVEYPRVLRGSFDEAFLDVPHEIICDSMLSNQRYFPLYDE 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+LV+N S I+ GN RVV ARL DA F+ D Sbjct: 292 HGRLTRNFVLVANTPLSAERE-IIAGNERVVRARLFDAKFFYDED--------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVD 412 L PL+ ARL+ V F ++G+ ++ RI L +IAQ D Sbjct: 336 -----LDVPLETLRARLER--VGFQKRLGSLLQKSDRIERLAARIAQRAGFDAQRTADTC 388 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +KADL + V EF QG +G YA E AI +H +PR + +P Sbjct: 389 RAARFAKADLVSAAVVEFTSQQGVMGGYYARAAGEPEEVAVAIRDHYRPRFAGDALPETV 448 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I V++ADKLDT+ +A +E P+GS DPYALRRA +GII I + + I L+ IE Sbjct: 449 IGAAVAIADKLDTIAGIFAADEAPTGSSDPYALRRAAIGIIAIARDT-LPIDLAPLIEEA 507 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + + F +RL + + D A+ + +D Sbjct: 508 LRGYAEQGVEFDFDAVEAAIRSFIANRLVGVVREEGAAPDTARAVASVGVISPADFIDRC 567 Query: 575 KHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 L+E + E ++ R I + + +E + AE L + Sbjct: 568 LALDEAREHDRDTFEDLAVAYARASHIA------DPSLGIECDRALMGT-AEIELLLAVD 620 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 D + ++ + Y + L ++ P++ FF++VLV +DR +R+NRL LL + Sbjct: 621 DERAVVSRALRDRDYARSFSALAALRVPVDRFFEEVLVMDEDRSLRENRLKLLNRFVAVF 680 Query: 693 LIVINVQKI 701 V ++ ++ Sbjct: 681 SDVADIGEL 689 >gi|320547918|ref|ZP_08042201.1| glycyl-tRNA synthetase beta subunit [Streptococcus equinus ATCC 9812] gi|320447458|gb|EFW88218.1| glycyl-tRNA synthetase beta subunit [Streptococcus equinus ATCC 9812] Length = 679 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 200/713 (28%), Positives = 338/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLKEKRLAFEGIQTFSTPRRLAVRVLGLADAQTDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL T I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGLTTDD---IEFREVKGEEYVYVTKHETGKAAKEVLV 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P +M W+ + F +IRP+ ++ +L E +I Sbjct: 132 D-IPEILSAMTFPVNMHWAN-----NTFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF ++ S D Y DL + V+ D + R++ I+N + A + + Sbjct: 181 GRVSRGHRFLGHET-EIASADSYEEDLRKVFVIADAKERQDMIVNQIKAIEKAENVRVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +G L FI Sbjct: 240 DDELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDLDGNLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNEKH-IENVIKGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---RAIVLSKADL 422 +A+LD +V FH KIG+ E +SR +V+ +A+ A RA + K DL Sbjct: 339 ADLVAKLD--NVTFHEKIGSLSEHMSRSKVIATYLAEKAGASAEESKALARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P N+P K+ ++LADK Sbjct: 397 LTSMVGEFDELQGIMGEKYALLAGEDAAVAIAIREHYLPNSAEGNLPETKVGALLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + I++ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELIDNLYALSFDSLTY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R++ + + + D+ EA+L N + +++ L E + + Sbjct: 517 EHKAEVMDFIRARVEKMM-SKSVSKDIKEAVLASSNFVVAEMLEAADALVEASKAEGYKA 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R+F + ++ + + + EK L +D S Sbjct: 576 AVESLSRVFNLAEKAQEG-----VAVDASLFENDEEKALAQAAADLNLAGSASDK----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + I+ FFD +V VD+ V++NRL++L + V K+ Sbjct: 626 --LAQLFVLSSVIDKFFDNTMVMVDNEAVKNNRLAILAELTAKASSVAAFNKL 676 >gi|269122522|ref|YP_003310699.1| glycyl-tRNA synthetase subunit beta [Sebaldella termitidis ATCC 33386] gi|268616400|gb|ACZ10768.1| glycyl-tRNA synthetase, beta subunit [Sebaldella termitidis ATCC 33386] Length = 680 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 197/708 (27%), Positives = 327/708 (46%), Gaps = 75/708 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+PAR + +L ++ LKEE + + +++ + TP RL L ++G++ Sbjct: 2 DFLFEIGVEELPARYVDSSEAELKKLMTESLKEERISFGSVKSFSTPRRLALLIEGMAEK 61 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E ++ GP V G KA +GFL+ I+ + KG Sbjct: 62 QEELHKKSTGPSVEAAYKDGKLTKAGEGFLKGQNADEADIKIIENE--KGKYISVEKFYA 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++L ++ A++ + + KSM+WS F + RP+K IL +L K++ Sbjct: 120 GKDTAEILPDLLNKALKGLTFDKSMKWSDKQ-----FRFARPIKWILALL-----DNKVL 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D + I T G R A + + ++ Y LE+ V+ D R+ IL Sbjct: 170 DFTFEGIKASGKTRGMRNFASQDVVINNITEYESILEKNYVIADHNKRKEKILESIRENC 229 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G +++ + LLEE++ LVE+ G F+K YL LPE++I +T++T+Q+ F + ++ Sbjct: 230 ENDGDQVIINDYLLEEVLNLVEYPYAIKGEFNKNYLELPEDIITITMETHQRYFPVKDKD 289 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G LAN F+L+ N A+ +GN +V+ RL DA F+ D Sbjct: 290 GKLANKFVLIRNAPV--YSEAVKKGNEKVIEPRLADAKFFYDED---------------- 331 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L LDQ + +L +VVF +GT E++ R + I + D + R Sbjct: 332 ----LKVKLDQNVEKLK--NVVFQKDMGTIYEKIQRSEKIADYIISELKLDDKKEDIKRT 385 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ +EF +LQG +G+ YA + E S I EH PR + +P Sbjct: 386 VYLAKADLVSNVIGEKEFTKLQGFMGEVYARHEGEKESVAKGIFEHYLPRYFGDILPKTI 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 +ADK+DT+ +A+ P+ SKDPYALRRA GI+ + L +DI + I+ Sbjct: 446 EGAVAGIADKIDTITGCFAVGLIPTSSKDPYALRRAAQGIVSVCLFQNLDIDYDRLIDTT 505 Query: 533 -------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + FF RL LY+ ++ DLI ++ E + T+ D Sbjct: 506 LEIFSENKEIKGKKEEVAAQIKEFFKQRL-LYILSEELDKDLITYVINLE-TKIGTLKDR 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K L E + K E + KR+ IL + + + E +L+ I Sbjct: 564 VKILEELSKTDKFEILVNLLKRVRNILRENKAQGNP----VQEDLFEKAEETKLFDYIKR 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + E +R+++I ++L I FFD V+V + E+++NR Sbjct: 620 LEKTVNE----ERFYEIVNILLENAHIINDFFDNVMVIAEKNEIKNNR 663 >gi|227500713|ref|ZP_03930762.1| glycine--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227217171|gb|EEI82520.1| glycine--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 688 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 203/731 (27%), Positives = 348/731 (47%), Gaps = 74/731 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIP+ + L L++E + + + TP R ++L ++ Sbjct: 2 MSNYLLEIGVEEIPSDYVKNTKKQLEDKFKKLIEENKLTCEEVLVESTPRRFAIFLNNVN 61 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EK GP V G K + GFL+ G + ++ K D Sbjct: 62 ADTEEKTISVKGPSVKIAYDEGGQANKPLLGFLKGQGADIAD--VVIREFKGEDYIFIEK 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ + + +VLK V ++ + +P+SMRW+ + W RP++ + +L + Sbjct: 120 KEKSKSVAEVLKENVYDLVKSISFPRSMRWA-----GKSIRWARPIRWFVSLL-----DD 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ D + I NI+ GHR I + +++Y + L+E V+L + R++ IL + Sbjct: 170 EVLTFDAEGIKVSNISKGHRSLGSAEIVIDKIENYEKLLKENYVILRYKDRKDIILKGLN 229 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 RLAS VG E ++D+ LL+E+I +VE+ V +G DKKYL LP+E++ +K +Q+ F Sbjct: 230 RLASEVGGEYMKDESLLDEVINIVEYPTVLIGDIDKKYLELPKEVVTTPMKDHQRYFPVL 289 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L F++V N + +++GN +V+ ARLEDA F++ D Sbjct: 290 DENKNLLPYFLVVRNGD-EEFKENVIEGNKKVLVARLEDAKFFYELD------------- 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI--AQLIDADVAL- 410 + KPLD + L+ + F +G + R+ L ++ A I D+ Sbjct: 336 -------IKKPLDSYVDELN--SLTFFEGLGNMKLKTDRLTDLTERYRQALAIGEDMTHP 386 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA L+KADL T++V EF ELQG +G+ YA E AIEE PR +N+P Sbjct: 387 IGRAAYLAKADLVTKMVVEFTELQGTMGRIYAKKSGEEERIATAIEEAYMPRSAGDNLPK 446 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 I +S+ADK+DT++ +AI + +GS+DP+ LRRA LGII I L N IDI L + Sbjct: 447 TITGIILSIADKMDTIVGLYAIEKYVTGSQDPFGLRRACLGIINIFLANSIDIDLKRLVN 506 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++ FF DRLK L D +D + A++ N+L I Sbjct: 507 DALLVYTEKNELAFDYDTAMAKVLDFFRDRLKNKLIDDGYNYDTVNAVMNVSELNILRIA 566 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L++F E + RI + + N I L + E+ Y V+ Sbjct: 567 KKVASLDKFL--EDNEDQISYFTRIVNLSKDLDDDN------IREDLLENDLERSFYEVL 618 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 G + ++ Y + + + + D+ ++NVD+ ++++NR++++ + Sbjct: 619 ISLGDFV--AVAETDYLAELEKIKETSQIGNEYLDKTMINVDNEQLKNNRIAMINILAKR 676 Query: 692 ILIVINVQKIV 702 I + +V++IV Sbjct: 677 IKQIFDVKEIV 687 >gi|222153556|ref|YP_002562733.1| glycyl-tRNA synthetase subunit beta [Streptococcus uberis 0140J] gi|254781865|sp|B9DV92|SYGB_STRU0 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|222114369|emb|CAR43106.1| glycyl-tRNA synthetase beta chain [Streptococcus uberis 0140J] Length = 679 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 203/713 (28%), Positives = 349/713 (48%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + K+ L + LKE + +++++ + TP RL + + GL+ + IE+ GP Sbjct: 15 PAYVVTKSEMQLGEKVASFLKENRLSFESIQTFSTPRRLAVRVIGLAEKQEDLIEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + E+VLK Sbjct: 75 SKKIALDENGEFSKAAQGFVRGKGLTTDA---IEFRTIKGEEYVYVTKHENGKDAEEVLK 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P SM W+ F +IRP+ ++ +L +I Sbjct: 132 D-IPSVLSSLTFPVSMHWANH-----TFEYIRPVHTLTVLLDDNALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G + GHRF + +++ + Y DL+ V++DP+ R+ IL+ + A + + Sbjct: 181 GQKSRGHRFLG-KEVTIENANSYESDLKTVFVIVDPKERQQMILDQIKAIEIAENVAVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMG+FD+KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DEDLLNEVLNLVEYPTAFMGTFDQKYLDVPEEVLVTSMKNHQRYFVVRDKNGHLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N S+ +++GN +V+ ARLED FWK DQ + Sbjct: 300 VRNG-NSEYIENVIKGNEKVLVARLEDGEFFWKEDQKL--------------------NI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R +V+ +A+ + + +DRA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARTKVIASHLAEKVGLSDQERQALDRASQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ AI EH P +P +K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGESAMVATAIREHYLPNSAEGALPESKVGALLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDTL++F++++ PSGS DPYALRRAT GI+RI+ +IP+ +E+ Sbjct: 457 LDTLLSFFSVDLIPSGSNDPYALRRATQGIVRILEAFGWNIPMDALVENCYQLPFESLTY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + + I D+ +A+L N + +++ + L S + Sbjct: 517 TNKDQVMSFISARVDKMM-GKAIPKDIRDAVLASTNYQVPQMLETAQALVSASQSQGYKT 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + R+F + E++ +I+ + E LY I + Sbjct: 576 AVENLSRVFNLAEKAEQE-----PQINSDLFENDEEIALYKAIENLNLE-------GNAK 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ + I FFD +V V+D V++NRL+LL + + + + Sbjct: 624 EKVEQLFALNDVIVNFFDHTMVMVEDVNVKNNRLALLSSLVSKAQTLAQFNLL 676 >gi|86152952|ref|ZP_01071157.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612141|ref|YP_001000908.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni 81-176] gi|167005821|ref|ZP_02271579.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni 81-176] gi|85843837|gb|EAQ61047.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249824|gb|EAQ72783.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 81-176] Length = 664 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 182/718 (25%), Positives = 330/718 (45%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNILEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ G+ + K+ K +V Sbjct: 60 EKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAGIS--ENELTFKEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L ++ ++ + + KSMRW ++F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMIEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSAKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDYSK-IIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQFI 529 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 530 EDQN------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L F +RL + + ++A+L +N +L+ I + L E Sbjct: 502 SHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIELSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + + EAE +LY + Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAFQE-------KTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|157415497|ref|YP_001482753.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni 81116] gi|157386461|gb|ABV52776.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni 81116] gi|307748139|gb|ADN91409.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni M1] gi|315932379|gb|EFV11322.1| glycyl-tRNA synthetase beta subunit [Campylobacter jejuni subsp. jejuni 327] Length = 664 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 182/718 (25%), Positives = 330/718 (45%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNVLEEYRLV-NDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ G+ + K+ K +V Sbjct: 60 EKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAGIS--ENELTFKEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L ++ ++ + + KSMRW ++F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMIEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSAKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPNKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPGEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDYSK-IIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQFI 529 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 530 EDQN------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L F +RL + + ++A+L +N +L+ I + L E Sbjct: 502 SHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIELSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + + EAE +LY + Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAFQE-------KTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|114570728|ref|YP_757408.1| glycine--tRNA ligase [Maricaulis maris MCS10] gi|114341190|gb|ABI66470.1| glycyl-tRNA synthetase beta chain [Maricaulis maris MCS10] Length = 738 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 262/767 (34%), Positives = 378/767 (49%), Gaps = 97/767 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L EI+ EEIPARMQ +A DL +L LK G+ + ++R + RL L + GL Sbjct: 1 MSELLFEIFCEEIPARMQPRAEADLEKLLGDRLKAAGLAWTSLRTFAGARRLGLVIDGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + + EER GPRVGA KA++GFLR G+ ++ C+ K+ KKG+ ++A + KP R Sbjct: 61 VKTADVSEERKGPRVGAPDKAVEGFLRGAGVASLDQCE-KRADKKGEFWVARIEKPGRAS 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ +P ++ PWPKSM++ W+RP++ +LC+ ++ +++ Sbjct: 120 AEVIAESIPDMMKAFPWPKSMKFGEGEKAQ---RWVRPIQRLLCVFDGN-----VVPVEV 171 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAV 239 I N+T GHR P V + Y LE E VLLD R + ILN A ++ Sbjct: 172 FGITASNVTEGHRRMGRGPFTVSNFLEYATVLEGEGHVLLDRAARESLILNGARKVCVDA 231 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGV 298 G ELVED LL E+ GLVEW +G D +L LP E+I LT+KT+QK F R + G Sbjct: 232 GFELVEDAGLLTEVAGLVEWPVPVLGEMDPDFLDLPPEVITLTMKTHQKYFAVRDPKTGE 291 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L + F+ ++N A DGG AI GN+RV++ARL DA HFW D+ Sbjct: 292 LVSKFVTIANQVAPDGGVAIAAGNARVLSARLSDARHFWDNDR----------------- 334 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 PL A+L V FH K+GT ++V R+ L +++A ++ AD L RA L+ Sbjct: 335 ---KTPLSDMAAQLS--KVTFHEKLGTVADKVERVAALAEELADVVGADKKLARRAAELA 389 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EFPELQG +G+ YA+ Q E+ + DAI++H KP+GP + VPT +S V+ Sbjct: 390 KADLVSEMVYEFPELQGAMGRYYALDQREDAAVADAIKDHYKPQGPSDEVPTAPVSAAVA 449 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-LSQFIEDQNLILF 537 LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG+IRI+LE +P L Q +E ++ Sbjct: 450 LADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVIRILLEAGTRVPLLEQILEHVRVLAL 509 Query: 538 FHDR-------------------------------LKLYLHDRDIRHDLIEAILRPENDN 566 R L+L L + R D Sbjct: 510 RDIRDALEVSREMGLVLGAKYAARWVPIEDVTIGALELGLENYSAPGARTRETSRLGADL 569 Query: 567 LLTIVDLIK-----------HLNEFFSSAKGEKFLLSAK-RIFQILAIEEKKNREISLEI 614 L D +K ++ F+ + ++ K R Q E ++ Sbjct: 570 LSFFADRLKVHLRDEGTRHDVIDAVFALGDDDLVRVTHKARALQAFLDTEDGAALLAGNK 629 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD--------LLH----------- 655 +L ++E L + + L Sbjct: 630 RASNILAKSEGDLTGEADAGYLAGAPESAERDLIAALNTAGPAAEKALADEDFAAAMRAL 689 Query: 656 -SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + PI+ FF+QV VN DD +R NRL LL I+ I V + KI Sbjct: 690 SQLRAPIDAFFEQVTVNTDDAALRRNRLLLLSAIRTAIRAVADFDKI 736 >gi|223040748|ref|ZP_03611015.1| glycyl-tRNA synthetase, beta subunit [Campylobacter rectus RM3267] gi|222877938|gb|EEF13052.1| glycyl-tRNA synthetase, beta subunit [Campylobacter rectus RM3267] Length = 677 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 182/721 (25%), Positives = 326/721 (45%), Gaps = 66/721 (9%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M + ++EI EE+PA K +++ L + + Y+TP R+ Sbjct: 1 MSETKELIVEIGVEELPAIPFLKECGNVAAKWRETLAQNSLD-SECEFYYTPRRIAFCHP 59 Query: 58 GLSPHSPEKIEERLG-P-----RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + E +G P + GA A F + G+ + +V Sbjct: 60 KFAVRQEDGFSEFIGAPRQVAQKDGAWTPAALSFAKKCGIDESELKF--ETVGGKEVLYY 117 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + ++L ++ + + + KSMRW F +IRP++S LC+L Sbjct: 118 KKPVAGKPSAELLGDMIEKFLLSLNFGKSMRWGEGK-----FEFIRPVRSFLCLL----- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ + ++ G+ + +R V++ Y + + ++LD RR IL++ Sbjct: 168 GDEVVKFNKFDVESGDSIFMYRSVGYDKFTVKNAKDYFAAMPKIGIILDQNARREKILSE 227 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 ++ + G+ + D+ LL+E++ + E +G F++++L +P E+I ++K NQ+ F Sbjct: 228 FKQIEAKNGVTVEVDEALLDEVVAITEHPTALLGGFEREFLEVPSEVIITSMKENQRYFP 287 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G LAN F++VSN + + A IV+GN +V+ ARL DA+ FW+ D + LK Sbjct: 288 VF-ESGKLANRFVVVSNAISPE-PALIVKGNEKVLRARLSDAMFFWRSDLAHEFGPEKLK 345 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VAL 410 + L L + G ++ ++ D AL Sbjct: 346 N----------------ITYLKELGSTYDKSARELGVAKRLAKICADRLKACAGEDYEAL 389 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++R+++LSKADL T++V EF ELQG +G YA + EN + AI+E P G +P+ Sbjct: 390 LERSVMLSKADLTTQMVYEFTELQGVMGGYYAAAKGENENVVTAIKEQYLPSGEASALPS 449 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 S V+LA KL+TLI ++ + PSG+KDPYALRRA G+I+II ++ ++ F Sbjct: 450 TIFSSVVALAIKLETLIGLFSAGKIPSGNKDPYALRRAANGVIKIIQNENLNFDIAAFLR 509 Query: 529 --------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + + LI F DRL + D+ +++A L + ++L + I+ L Sbjct: 510 ETAEGYAKFDVEALIGFIFDRLYTFF---DVNPSVVKACLASKKGDVLAQCEAIEALGAI 566 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 ++ + + KR+ I+ E + E+EK+L Sbjct: 567 CAAEDFRQNFSTFKRLANIIKDENF------GVVDEAKFENESEKKLNDAFKAAVK---- 616 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 Y + L + I+ FFD V++N +D VR NRL+L+ I L + ++++ Sbjct: 617 --AGGSYSERLKNLFGLKAAIDEFFDNVMINAEDELVRKNRLALVGQIYAEFLKIADIKE 674 Query: 701 I 701 I Sbjct: 675 I 675 >gi|94992904|ref|YP_601003.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS2096] gi|94546412|gb|ABF36459.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS2096] Length = 650 Score = 482 bits (1240), Expect = e-133, Method: Composition-based stats. Identities = 192/698 (27%), Positives = 337/698 (48%), Gaps = 76/698 (10%) Query: 29 LIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV-------GAGKKA 81 + L E + +++++ + TP RL + + GL+ + E+ GP G KA Sbjct: 1 MATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGPAKKIALDADGNFSKA 60 Query: 82 IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLKTIVPVAIQKVPWPKS 140 GF+R GL T + I+ KG+ Y+ V + + ++VL V + + +P S Sbjct: 61 AQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLLG-VTEVLSAMTFPVS 116 Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 M W+ ++F +IRP+ ++ +L ++ ++LD +I G ++ GHRF Sbjct: 117 MHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHSGRVSRGHRFLGTET- 165 Query: 201 KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWV 260 + S D Y DL V++D + R+ I+ L G+++ D+DLL E++ LVE+ Sbjct: 166 TITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQVDIDEDLLNEVLNLVEFP 225 Query: 261 QVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQ 320 FMG+F+ KYL +PEE++ ++K +Q+ FV R + G L F+ V N +++ Sbjct: 226 TAFMGNFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVSVRNG-NDQAIENVIK 284 Query: 321 GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFH 380 GN +V+ ARLED FW+ DQ + +A+L +V FH Sbjct: 285 GNEKVLVARLEDGEFFWREDQKLQ--------------------IADLVAKL--TNVTFH 322 Query: 381 AKIGTQGERVSRIRVLGKKIAQLIDADVALV---DRAIVLSKADLCTEIVREFPELQGKI 437 KIG+ E + R RV+ +A+ + V DRA + K DL T +V EF ELQG + Sbjct: 323 EKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDLLTGMVGEFDELQGIM 382 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G++YA+L E+ + AI EH P +P K+ + ++LADKLDTL++F+++ PS Sbjct: 383 GEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGVVLALADKLDTLLSFFSVGLIPS 442 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------DQNLILFFHDRLK 543 GS DPYALRRAT GI+RI+ IP+ + ++ +++ F R+ Sbjct: 443 GSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTYTNKADVMNFIRARVD 502 Query: 544 LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 + + D+ EAIL + ++ + + L + + + + S R F + Sbjct: 503 KMM-GKAAPKDIREAILASSTFVVPEMLAVAEALVKASHTENYKPAVESLSRAFNLAEKA 561 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 + S+++ P E E L+A I + Q + + ++ I Sbjct: 562 -----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAA-------QQLEQVFALSPVIND 609 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD +V +D+ +++NR+++L + + + ++ Sbjct: 610 FFDNTMVMAEDQALKNNRVAILSDLVSKAKTIAAFNQL 647 >gi|86150989|ref|ZP_01069205.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|315124694|ref|YP_004066698.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85842159|gb|EAQ59405.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|315018416|gb|ADT66509.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 664 Score = 482 bits (1240), Expect = e-133, Method: Composition-based stats. Identities = 181/718 (25%), Positives = 329/718 (45%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNILEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ G+ + K+ K +V Sbjct: 60 EKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAGIS--ENELTFKEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L ++ ++ + + KSMRW ++F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMIEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSAKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDYSK-IIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQFI 529 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 530 EDQN------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L F +RL + + ++A+L +N +L+ I + L + Sbjct: 502 NHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + EAE +LY + Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFAQEAESKLYKAFQE-------KTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|322391802|ref|ZP_08065267.1| glycyl-tRNA synthetase beta subunit [Streptococcus peroris ATCC 700780] gi|321145282|gb|EFX40678.1| glycyl-tRNA synthetase beta subunit [Streptococcus peroris ATCC 700780] Length = 678 Score = 481 bits (1239), Expect = e-133, Method: Composition-based stats. Identities = 199/713 (27%), Positives = 330/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y+ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDENRLSYEGIQTFSTPRRLAIRVLGLAEQQTDLTEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPKRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREIKGEEYVYVTKHEAGKPAKEVLT 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +P + + +P SM W+ + F +IRP+ +++ +L E +I Sbjct: 132 G-IPEVLASLSFPVSMHWAN-----NTFEYIRPVHTLIVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF ++++ D Y DL + V+ D R N I + G+++ Sbjct: 181 GRVSRGHRFLGHE-VEIRHADSYEEDLRKVYVIADSIERENMIREQIKAIEVEQGVQVQV 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+ LL E++ LVE+ F+G+FD KYL +PEE++ +++T+Q+ FV R EG L FI Sbjct: 240 DEGLLNEVLNLVEYPTAFIGNFDPKYLEVPEEVLVTSMETHQRYFVVRDLEGNLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +A+L V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 EDLVAKLS--HVTFHEKIGSLREHMIRSGQIAILLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L EN AI EH P +P +K+ ++LADK Sbjct: 397 LTGMVGEFDELQGVMGEKYALLAGENARVAQAIREHYLPDSADGALPESKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ + IP+ + I Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEDFGWKIPMDELIASLYALSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 + ++ F R+ + D+ EA+L N + +++ + L E + + Sbjct: 517 DNQEEVLNFIKARVDKMMGS--TAKDIKEAVLASSNFVVSDMIEAAEALTEAAKTEDYKS 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E S+++ E EK L + S Sbjct: 575 SVESLSRAFNLAEKAEG-----SVKVDASLFENEQEKELAQEVESLELKGSASDK----- 624 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V +D +V++NRL++L + N V + Sbjct: 625 --VAQLFALSPVIDAFFDNTMVMAEDVDVKNNRLAILVELVNKAKTVATFNLL 675 >gi|123968354|ref|YP_001009212.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. AS9601] gi|123198464|gb|ABM70105.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. AS9601] Length = 720 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 178/751 (23%), Positives = 328/751 (43%), Gaps = 83/751 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA H E ++ L ++ + ++++ TP R+ L L+GL Sbjct: 1 MSKYLLEIGTEELPANFSHAVLEQFKSLIEFELDKKLIKFEHIVVTSTPRRIVLLLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ +KI ER GP+ G A GF S G+ K +KGD Sbjct: 61 DYAEDKIIERKGPKANSAYLNGCPTNAALGFANSLGIDVGELEI--KKTEKGDFVFGKKI 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + L +I+P ++ + P+ M+W + + RP++ I I E + Sbjct: 119 EKGLSTKISLSSIIPKLVKSLQGPRFMKWGAGN-----MKFSRPIRWIASIYNDEILDFE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + D +I N T HR +++Q+ D + L+ V+ + R+ I + ++ Sbjct: 174 FDECD-PKIKINNKTKSHR-LINEVLELQNPDDFFELLKRNRVIAIRKERKEKIESLINQ 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + ++ L+ + LL E+ LVEW + +G F ++L LP E++ +K++Q+ Sbjct: 232 ASKSLNLKPDLSEGLLNELTDLVEWPDLIIGKFSDEFLELPVEVLSTVMKSHQRYVPLLL 291 Query: 295 REGVL----------ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 + + V + + I +GN +V+ AR DA F + D+ Sbjct: 292 KNKSFSKLDLSSEKNISTTFCVISNGLEESNNNIAKGNEKVLKARFSDAKFFVESDKKVA 351 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 +R +L V + +G +RV RI + KKI + + Sbjct: 352 S--------------------IKRNEKLK--SVSYLKGLGNIFQRVERIEEVTKKILKFL 389 Query: 405 D---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + + + A K DLC+EIV EFPELQG +G +Y + + C A+ EH P Sbjct: 390 NDKSLEEKKIIEAAKYCKNDLCSEIVFEFPELQGIMGGKYLKYEGFSEDVCLAVAEHYLP 449 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 + +P+ K VS+ADK++TLI+ + ++PSGS DPYALRR G+I+II + ++ Sbjct: 450 SFYKDALPSTKYGAIVSIADKVETLISIFISGKRPSGSSDPYALRRNLNGVIKIIWDYEL 509 Query: 522 DIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 D+PL + +L F R+ +L + + +LI+A+ Sbjct: 510 DLPLDKLFNELIDFWKIVFPNLNFSRVTVFNDLNEFLVQRIVSHLEEISLSKELIKAVCS 569 Query: 562 PE------NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE-- 613 + N++ + + + + +F + R+ ++ + +S Sbjct: 570 SDELSQKRVLNIVDLKNRVNSIIKFNKKDNFVEIQKVITRVSKLANKSDISRDVLSTRDY 629 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ---VLV 670 ++ + + E +++ I + E Y ++ +L IE FD VL+ Sbjct: 630 VNTKLFEKDCEFKVFEFIGELEKLFSEGYS--NYLELLNLFEINVNTIEDLFDNEKGVLI 687 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D ++R+NRL+LL I+N L + + + Sbjct: 688 MSEDLKIRNNRLNLLSLIRNYSLKIADFTLL 718 >gi|33598170|ref|NP_885813.1| glycyl-tRNA synthetase beta chain [Bordetella parapertussis 12822] gi|33566728|emb|CAE38939.1| glycyl-tRNA synthetase beta chain [Bordetella parapertussis] Length = 712 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 187/738 (25%), Positives = 325/738 (44%), Gaps = 75/738 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + K + + + L ++ + + TP RL + L + Sbjct: 8 LLVELFTEELPPKALQKLGQAFAEGVRATLARHHLLADGCAVEPFATPRRLAVRLSAVLA 67 Query: 62 HSPEKI-EERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVL 113 +PE+ E+L P G A+ L + GL+ + ++++ K + +A Sbjct: 68 QAPEQAYAEKLMPVKVGLDANGQPTAALAKKLAAKGLEGLDPATLERESDGKQEYLVARG 127 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + L+ + AI +P PK MR+ + ++RP ++ + A+ Sbjct: 128 TAAGAQLAVGLQEGLDAAIDGLPIPKVMRYQLADGQ-TTVKFVRPAHGLVALFGAD---- 182 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDA 232 I+ + + G T GHRF + I++ + Y DL E V+ E RR I Sbjct: 183 -IVPIAALGLQAGRATQGHRFQSNGAIELATAQGYEADLAERGRVIASFEARRAEISRLL 241 Query: 233 HRLASAVGLELVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A +G L +D + LL+E+ LVE V++G F++++L +P+E + LT++ NQK Sbjct: 242 DEHAQRLGATLGDDPEVTALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTMRLNQKY 301 Query: 290 FVTRTR-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L + F++VSN+Q +D A IV+GN RVV RL DA F++ D+ Sbjct: 302 FPLFDPASGKLTHRFLIVSNMQVAD-PANIVEGNQRVVRPRLADAQFFFETDR------- 353 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 PL R+ +L +V+H K+ TQ ERV R+R + + IA + D Sbjct: 354 -------------KTPLAARVEQLG--SIVYHNKLSTQLERVERVRAIARGIATALGGDA 398 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A DRA +L+KADL + +V EFPELQG +G YA E A+ + R Sbjct: 399 AHCDRAALLAKADLGSNMVGEFPELQGIMGAYYAQGDGEPADVVTALRTQYRNRYDAPVD 458 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII---RIILENKI---- 521 + T+ +A++++TL+ W+I P+G +DP+ LRRA LG+I + Sbjct: 459 AATLTAATLFIAERIETLVGIWSIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKVS 518 Query: 522 ---DIPLSQF---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + L + F ++R + L R + +EA++ Sbjct: 519 EDGPLSLDGLLALAAQAFPDGKIGADTLAEVRAFIYERYRNQLIGEHDR-NAVEAVIALA 577 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 L + ++ + F + KRI +L E + + + A Sbjct: 578 P-PLHQVAARVRAVAAFAQLPAAASLAAANKRIGNLLKKAEGE----IGAVDAALVQDPA 632 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK L ++ + + + L EP++ FF V+V DD +R NRL+ Sbjct: 633 EKALAEAVAQLRPQARAQLQAGDFAASLATLAQAREPVDAFFADVMVMADDAALRANRLA 692 Query: 684 LLQYIKNIILIVINVQKI 701 LL + ++ V ++ ++ Sbjct: 693 LLGQLHGLMNQVADISRL 710 >gi|154249735|ref|YP_001410560.1| glycyl-tRNA synthetase, beta subunit [Fervidobacterium nodosum Rt17-B1] gi|154153671|gb|ABS60903.1| glycyl-tRNA synthetase, beta subunit [Fervidobacterium nodosum Rt17-B1] Length = 672 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 195/723 (26%), Positives = 332/723 (45%), Gaps = 78/723 (10%) Query: 1 MP---DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M +FL E+ EE+P + + LS + L EG+ Y+ + + P R ++ Sbjct: 1 MSKPNEFLFELGIEELPTTEINGLIQQLSDKIQNTLSVEGINYEKFQIFVAPRRFGFVIE 60 Query: 58 GLSPHSPEKIEERLGPRVG-------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 GL ++PEK+ E+ GP KA+ GFL+S I Sbjct: 61 GLPDNTPEKVIEKKGPAANIAFDENNQPTKALLGFLKSNNSTLEEVKIIDN------YVY 114 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 + IE+ LKT VP I + + K M+W+ + ++R +L +L Sbjct: 115 ITKTQKGLPIEEFLKTTVPSIITSIKFRKPMKWADGK-----YEFVRIPHHVLALLNG-- 167 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 KI+++++ EI N T GHRF +V S+ Y L + V+ E R I + Sbjct: 168 ---KIVEMEIFEIKSSNKTVGHRFVMDEYFEVNSVQDYFDKLSKYYVIPKLEDRIKFIKS 224 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 G + +D++L++E+ L E+ ++ G+F +KYL LPEELI+ TIK +Q+ F Sbjct: 225 QLEEF-EKNGYTIDKDEELIQEVAILTEYPKLISGTFLEKYLTLPEELIKTTIKHHQRSF 283 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + N F+ ++ + G A +G RV+ ARLEDA +++++D + Sbjct: 284 TV-HSGNKITNTFVAFIDMPMDELGNAK-KGYERVINARLEDAKYYYEKDIHF------- 334 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-- 408 L+ +L ++VF ++GT +++SRI L KKI ++++ + Sbjct: 335 -------------KLESFNEKLK--EIVFQKELGTLYDKISRIEQLSKKIIEILELEKIS 379 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R L KAD+ T +V EFPELQG +G+ YA+ E + IEEH + Sbjct: 380 DNILRTAKLCKADIGTHVVYEFPELQGIMGRIYALKDGEAENIAYGIEEHY------SSN 433 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ V +AD++DT++ + I PSGSKDPY LR T I II + D+ L Sbjct: 434 PSTVEGAVVGIADRIDTIVGNFIIGNIPSGSKDPYGLRSKTDDIFAIIEKFSWDLDLKVL 493 Query: 529 IE----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +E LI FF +R +LY ++R+D+ A+ L I+ K + Sbjct: 494 LEKAAELLGKELPTTLIEFFENRFELYNS--NVRYDIARAVKHLWKKPLRGILS-AKAIY 550 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 + + E L+ +R+ I IS + E+EK+L+ + + Sbjct: 551 KLVGKEEFEHLLVGFERVHNISKK------HISEHFDSAKFVEESEKKLFQKYIEVKPFV 604 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +++ H + + L + I+ +FD+V V +D ++R NRL L+ I + + + ++ Sbjct: 605 LDAIKHLDFESALEKLIELRPYIDEYFDKVFVMCEDEDLRMNRLGFLKNIDMLFMEIGDL 664 Query: 699 QKI 701 I Sbjct: 665 TLI 667 >gi|256545607|ref|ZP_05472965.1| glycyl-tRNA synthetase, beta subunit [Anaerococcus vaginalis ATCC 51170] gi|256398684|gb|EEU12303.1| glycyl-tRNA synthetase, beta subunit [Anaerococcus vaginalis ATCC 51170] Length = 689 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 212/731 (29%), Positives = 355/731 (48%), Gaps = 72/731 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI EE P+ + + L L++E + + ++ TP R + L GL Sbjct: 1 MSKYLLEIGVEEFPSAYINSTKKQLEEKFKKLIEENKLSVEEIKVESTPRRFAILLDGLE 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + ++ GP G KA+ GFLR + I KD K + Sbjct: 61 ENKSNELISVKGPSKKIAYDNEGNPSKALLGFLRGQKAEVSD--VIIKDFKGEEYIYVEK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ I++VL+ V ++ + +P+SMRW + + RP++ L +L + Sbjct: 119 KEESLSIKEVLQKNVYDLVKSLNFPRSMRWG-----GRSIRFARPIRYFLSLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I++ D + I N T GHR I V+ +++YI L E V+L + RR IL + Sbjct: 169 EILEFDAEGIKVSNTTKGHRVLGKSEILVEKIENYIELLRENYVILSYKERREIILRGLN 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 R A +G + ++D+DLLEE+I +VE+ V MG D++YL LP+E+I +K +Q+ F Sbjct: 229 RYAKEIGGKFLKDEDLLEEVINIVEYPTVLMGELDQEYLKLPKEVIVTPMKDHQRYFPIV 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L F+LV N ++ GN +V+ ARLEDA F+ D N Sbjct: 289 DDNEKLMPYFLLVRNGD-DFAKENVINGNKKVLTARLEDAKFFYDIDNN----------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVAL- 410 K L+ + L+ + F +G+ ++ R+ L K + DV+ Sbjct: 337 ---------KKLEDYVEELNR--LTFFEGLGSVYQKTERLISLSKNYLDEFKLGEDVSDN 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA LSKADL T++V EF ELQG +G+ YA EN +AIEE KPR +++P Sbjct: 386 LLRAAYLSKADLVTKMVIEFTELQGIMGRIYATNSGENSQVANAIEEAYKPRSSEDSLPK 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + I +S+ADK+DT+ + I +GS+DP+ LRR+ +G+I II +NKID+ L I+ Sbjct: 446 SVAGIVLSIADKIDTIAGLYIIENYVTGSQDPFGLRRSAIGVINIIADNKIDVDLKDLIK 505 Query: 531 D-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 D + ++ FF DRLK L D+ R+D + A+L N+L+++ Sbjct: 506 DALFVYTEKNEISFDYDKTLEKIVEFFIDRLKNMLIDKGYRYDFVNAVLATGETNILSVI 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + +K + EF E+ L RI E + E++ + L EK+ Y +I Sbjct: 566 EKVKSVEEFVEKENSEEILNYFTRINNFTKDFE------NTEVNVEILDQGLEKQYYDLI 619 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++ + K Y + + + S + + D ++ V+D ++++NRL+LL + Sbjct: 620 ENL--DCEKYLSQKLYTKALEEIASTMDLGNEYLDNTMIMVEDEQLKNNRLALLNKLATN 677 Query: 692 ILIVINVQKIV 702 I + N++ +V Sbjct: 678 ISRIFNIKDLV 688 >gi|34556652|ref|NP_906467.1| glycyl-tRNA synthetase subunit beta [Wolinella succinogenes DSM 1740] gi|34482366|emb|CAE09367.1| GLYCYL-TRNA SYNTHETASE BETA CHAIN [Wolinella succinogenes] Length = 682 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 196/716 (27%), Positives = 327/716 (45%), Gaps = 58/716 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA + L LL++ + ++TP RL L + Sbjct: 5 LLIEIGIEELPAIPFLRELPHLLSKWNTLLQKYRME-SPFELFYTPRRLVLLSQAFPLEQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 PE E GP + GA KA + F G+ K+ K +V Sbjct: 64 PELKEALFGPPLEIAFKEGAPTKAAESFAAKCGVSVSELGSATKEGK--EVLFYSKTSAG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L ++ I + + KSMRW + H +IRP++ + + E +I Sbjct: 122 ESAKRLLPLMIEEWIASLNFGKSMRWGSLHEN-----FIRPVRWLGIM-----HGENLIP 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 L I +TY HR + P + + ++ L + V+LDP+ RR IL + + Sbjct: 172 ATLFGISSQKLTYVHRIDSFEPQPYEDIASFLALLAQKGVILDPKVRREKILQEIRDIEE 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G+ + D DLLEE++ + E+ +G F+ ++L LP E+I ++K NQ+ F + Sbjct: 232 REGVSVELDTDLLEEVVAITEYPTALLGHFEARFLELPPEVIITSMKENQRYFALYQGD- 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N FI+VSN ++ IVQGN +V+ ARL DAL F++ D N L+E Sbjct: 291 KLYNGFIVVSNARS-QNAKLIVQGNEKVLRARLSDALFFYQNDLKNGLLTERLQEVTFVE 349 Query: 358 NLDLSKPLDQRMAR--LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L +R + L + D+ + + +R L+ A Sbjct: 350 GLGSMAQKSERETKIALYLFDLYASKLFASSPKNQEELR--------------TLMQEAA 395 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL +E V EF ELQG IG ++ +A++E P+G +P++ S Sbjct: 396 TLAKADLMSETVYEFTELQGTIGYYLGKALGKDPLVYEALKEQYLPKGEDSELPSSPFSA 455 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS--------- 526 ++LA +LD L+ +++ P+GSKDP+ALRRA G++RI+ + KI + LS Sbjct: 456 ILALAHRLDNLMGLFSLGRIPTGSKDPFALRRAASGVLRIVWKQKIPLDLSIVLPELAPL 515 Query: 527 -QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + + L F +R++ L I A+ NLL + + I+ L+ SS++ Sbjct: 516 YKPFALKELEGFILERIESLLS---TNASFIRAVAMGGERNLLFVGEKIEALSALLSSSE 572 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ + KR+ I + + EI P++L E EKRL+A + S + Sbjct: 573 GKSLSTTFKRVANITKGMDMGDLP---EIKPEWLECEEEKRLFAEFNQVSQATHPSALEE 629 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + EP++ FFD VL+N D+ ++ NR +L+ +I L + ++++I Sbjct: 630 -----LSALLKLKEPLDQFFDHVLINCDNTLLKKNRQALIAHIYQAFLHIADIKEI 680 >gi|325478380|gb|EGC81495.1| glycine--tRNA ligase, beta subunit [Anaerococcus prevotii ACS-065-V-Col13] Length = 688 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 205/730 (28%), Positives = 350/730 (47%), Gaps = 74/730 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIP+ L L+ + + + TP R ++L+ ++ Sbjct: 2 MSNYLLEIGVEEIPSDYVKNTKNQLKEKFEKLITDNKLTCDEIVVESTPRRFAIFLENIN 61 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EK GP V G KK + GFL+ G + + ++ K D Sbjct: 62 ADTEEKTISVKGPSVKIAYDEGGEPKKPLLGFLKGQGAEISD--VVIREFKGEDYIYVEK 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ + + +VL+ V ++ + +P+SMRW + W RP++ + +L + Sbjct: 120 KEKAKSVAEVLEENVYDLVKSISFPRSMRW-----RGKSIRWARPIRWFVSLL-----DD 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I+ D ++I NIT GHR + I V +++Y + L E V+L + R++ IL + Sbjct: 170 EILAFDAEDISVSNITKGHRSLGSNHIVVDKIENYEKLLRENYVILRYKDRKDLILRGLN 229 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 RL+S VG E ++D DLL+E+I +VE+ V +G DKKYL LP+E+I +K +Q+ F Sbjct: 230 RLSSEVGGEYMKDADLLDEVINIVEYPTVLIGDIDKKYLELPKEVITTPMKDHQRYFPVE 289 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L F+LV N + +V+GN +V+ ARLEDA F+ D Sbjct: 290 DENKNLLPYFLLVRNGDDTHS-ENVVEGNKKVLVARLEDAKFFYDID------------- 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD- 412 + KPLD + L+ ++ F +G + R+ L + +D + Sbjct: 336 -------MKKPLDAYVDDLE--NLAFFEGLGDMKLKTKRLERLAENYRLALDIGDDMAHP 386 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL T++V EF ELQG +G+ YA E AIEE PR + +P Sbjct: 387 IGRAAYLSKADLVTKMVVEFTELQGTMGRIYAEKSGEEERISTAIEEAYMPRSAGDKLPK 446 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 I +S+ADK+DT++ +AI + +GS+DP+ LRRA LGII I LEN ID+ L + I Sbjct: 447 TITGIVLSIADKMDTIVGLYAIEKYVTGSQDPFGLRRACLGIINIFLENSIDVDLRKLIG 506 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + FF DRL+ L D ++D + A+L+ N+L + Sbjct: 507 DALLIYTEENELSFDYDLAMEKTLDFFRDRLRNKLIDDGHKYDTVNAVLKDGELNILKLT 566 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ L++F + E + R+ + + + E++ L + EK +A + Sbjct: 567 KKVEALDKFL--EENEDQISYFTRVVNL------SDSNVGEEVNKDLLEGDLEKDFFAEV 618 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 G + + S Y + + + E + D ++NV+D +++ NR+++L + Sbjct: 619 KALGEYKESS--ETDYLKELENIKMTSEVGNNYLDNTMINVEDEDLKANRIAMLNILARR 676 Query: 692 ILIVINVQKI 701 I + +V+++ Sbjct: 677 IKEIFDVKEL 686 >gi|257125160|ref|YP_003163274.1| glycyl-tRNA synthetase subunit beta [Leptotrichia buccalis C-1013-b] gi|257049099|gb|ACV38283.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia buccalis C-1013-b] Length = 678 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 199/723 (27%), Positives = 349/723 (48%), Gaps = 73/723 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI EE+PA+ KA +DL I+ LK E + + + + TP R+ +K L+ Sbjct: 2 NFLFEIGLEELPAQYVDKAEKDLKKIIENELKAERIKFSGIESFSTPRRVTAIIKDLAEK 61 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + ++ +GP V G KA +GF++S G I+ + KG Sbjct: 62 QDDLDKKSVGPSVEIAYKDGQLTKAGEGFVKSQGATADDIKIIENE--KGKYISIEKFIA 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++L I+ AI+K+ + KSM+W+ F ++RP+K + + +I+ Sbjct: 120 GKNTREILPEILKNAIKKIEFEKSMKWADR-----TFRFVRPIKWFVTLFD----NGEIL 170 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + + GN T G R+ A I++ + Y + L E V++D E RR IL Sbjct: 171 PFEFEGLKGGNKTRGMRYFASQDIEINNPLDYEKILLENFVIVDGEKRREEILKSIRENG 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G + +K LL+E++ +VE+ G F K YL LPE++I +T++T+Q+ F + ++ Sbjct: 231 ENDGDTAIINKYLLDEVVNVVEYPYAIKGEFSKDYLELPEDIITITLETHQRYFPVKDKD 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L+N FI++ N A + + +GN +VV RL DA F+ D Sbjct: 291 GKLSNKFIVIRN--APEYSETVKKGNEKVVEPRLADAKFFFDED---------------- 332 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVALVDRA 414 L + +L +V F +GT E+V R + + + ++ + R Sbjct: 333 ----LKNKFADNVEKLK--EVTFQKDMGTIFEKVKRSEKIAEYLISELNLTDKKENIIRT 386 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ +EF +LQG +G YA Q E+ I EH PR + +PT Sbjct: 387 VDLAKADLVSNVIGEKEFTKLQGFMGSVYAEKQGEDKDVALGIFEHYLPRYQGDELPTTV 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 +ADK+DT+I +++ KP+ SKDPYALRRAT GII+++L +K+ + IE Sbjct: 447 EGAIAGIADKMDTIIGCFSVGLKPTSSKDPYALRRATQGIIQVVLNSKLSFNYKKLIEKA 506 Query: 532 ----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +++ FF R+ L ++ + DLI + E+ N++ + + Sbjct: 507 YEIFSADKKVLEKDVVKDVTEFFKQRIINVLSEK-YKKDLINYEINLES-NVVELDKKLS 564 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L + + E + KR+ I+ K + I+ ++ + + EK L + Sbjct: 565 ELLKLSQTENFEILINLLKRVKNIV----KDEKNITTDVIFELFESKEEKALLDFANKL- 619 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ESM++ + + L + + I FFD V++NVD+ ++R NR++LL+ ++ I + Sbjct: 620 ----ESMENNEFSNYIEELLNNADTINQFFDNVIINVDNGKLRTNRIALLKKLELSIDKM 675 Query: 696 INV 698 IN+ Sbjct: 676 INI 678 >gi|262038699|ref|ZP_06012059.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia goodfellowii F0264] gi|261747251|gb|EEY34730.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia goodfellowii F0264] Length = 677 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 194/723 (26%), Positives = 348/723 (48%), Gaps = 74/723 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+P+R +A +L + LK+E + + + + TP R+ + +K +S Sbjct: 2 DFLFEIGLEELPSRYVDEAESNLKKLTENELKDERINFSEVESFSTPRRIAIIVKDISEK 61 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + ++ +GP V G KA +GF++S G + I+ + KG Sbjct: 62 QEDLDKKSVGPSVDIAFKGGELTKAGEGFVKSQGAEKEDIKIIENE--KGKYISVEKFIK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +++L I+ ++K+ + KSM+W +F + RP+K + +L +I+ Sbjct: 120 GKETKEILPDILSNIVKKIEFEKSMKWGE-----KSFRFARPIKWFVTLL-----GNEIL 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D + + I N + G R+ A + + + Y + L+E V+ + R+ IL Sbjct: 170 DFEFEGIKGSNKSRGMRYFASQDVAISNPSEYEKVLKENFVIAKKDKRKEEILKSIKENC 229 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G + + + LLEE+I LVE+ G ++K YL LPE++ +T++T+Q+ F R ++ Sbjct: 230 ENDGEKAIINNYLLEEVINLVEYPYAIKGEYNKDYLKLPEDITTITMETHQRYFPVRDKD 289 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L N FIL+ N A + + +GN +V+ RL DA F+ D Sbjct: 290 GKLTNKFILIRN--APEYSETVKKGNEKVIEPRLADAKFFFDED---------------- 331 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVALVDRA 414 L + +L +V F +GT +++ R + + + + + + R Sbjct: 332 ----LKHKFSDNVEKLK--EVTFQKDMGTIYDKIKRSQKIAEYLINETGLQEEKENILRT 385 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL T ++ +EF +LQG +G YA Q EN + I EH PR +++PT Sbjct: 386 VELAKADLVTNVIAEKEFTKLQGFMGSVYAEKQGENKNVALGIFEHYLPRYQGDSLPTTI 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 +ADK+DT+ +++ KP+ SKDPYALRRA GII + L +K+ + IE Sbjct: 446 EGALAGIADKIDTVTGCFSVGLKPTSSKDPYALRRAVQGIIYVTLNSKLKYDYKKLIEKA 505 Query: 532 ----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +++ FF R+ L ++ +LI + E+ N++ + + ++ Sbjct: 506 YEIFAADKKVLEKNVVEDVTEFFKQRIINVLSEK-YSKELINYEVNLES-NVVNLDEKLE 563 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L + + K EK + KRI IL E+ ++ I+ E EK+LY+ + Sbjct: 564 VLLKLSKTEKFEKLINLLKRIKNILKEEKGN----AVSINENLFSTEEEKKLYSFAEELE 619 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +++K + + L E I FFD+V +N ++ E+++NR+SLL+ ++ I + Sbjct: 620 N-----VENKGFFICTETLIENEEIINNFFDKVKINDENPEIKNNRISLLKKLEKISDKI 674 Query: 696 INV 698 IN+ Sbjct: 675 INL 677 >gi|118475036|ref|YP_892001.1| glycyl-tRNA synthetase subunit beta [Campylobacter fetus subsp. fetus 82-40] gi|118414262|gb|ABK82682.1| glycyl-tRNA synthetase, beta subunit [Campylobacter fetus subsp. fetus 82-40] Length = 671 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 188/723 (26%), Positives = 325/723 (44%), Gaps = 81/723 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA + ++ +L E G+ +TP R+ + + + Sbjct: 3 LLIEIGVEELPAIPFLRELNNIKPKWKQVLDEYGLD-SKFNLEYTPRRIVIN-GDIPELT 60 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P+ E +G G A GF + G+ D K+ K +V Sbjct: 61 PDLEVENIGAPKSVALQDGKWNAAALGFAKKCGIS--QDELGFKEIKGKEVLYHKSVIKG 118 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L+ D+L ++ I + + KSMRW + +IRP++S++ IL EK +D Sbjct: 119 KLVSDLLPAMIEKFILSLNFGKSMRWGNGE-----YEFIRPIRSLISIL-----GEKSLD 168 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 ++ + Y HR I S+D Y + + ++L R+ IL++ + + Sbjct: 169 FEIFGVKSKKAFYPHRNFGYDMIDFSSIDEYFELVRKNGIILSATQRKEKILDEFKTIET 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 L++ D DLL+E++ + E+ +GSF+K++L +P E+I ++K NQ+ F +G Sbjct: 229 KNNLKIELDFDLLDEVVAITEYPTALLGSFEKEFLEVPSEVIITSMKENQRYFPLHNADG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N F++VSN D I++GN +V+ ARL DA FW D Sbjct: 289 KLSNHFVVVSNAITDDHN-LIIRGNEKVLRARLSDAKFFWHSD----------------- 330 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---------V 408 L + + ++ + ++G+ ++ R R + + +A + D D Sbjct: 331 -------LASEFSSEKLKNITYLNELGSMYDKELRERQIARILASIYDKDLRYEFGGDYA 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 +DRA++LSKADL T +V EF LQG +G YA ++EN AI+E P Sbjct: 384 DELDRAVMLSKADLTTNMVYEFTNLQGVMGGYYAAYRDENPFIIGAIKEQYLPNA--NLY 441 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P S V++++KLDTL+ ++I + PSG+KDPYALRRA GII+I+L I+ L Sbjct: 442 PKTLFSSLVAISNKLDTLMGLFSIGKIPSGNKDPYALRRAASGIIKIVLNLGINFDLRNI 501 Query: 529 ----------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + L F ++RL D+ +I+A L +L + I L+ Sbjct: 502 LNLIKPNYKNFDLNYLESFVYERLYSI---YDVNPSVIKACLNSSQSDLKRLNAAIIALD 558 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 E + + KR+ I+ E E++ + E L +I Sbjct: 559 EICKMKDFKDNFSTFKRLSNIIKDSE------IAEVNESLFEEDVENELNNKFKALNLNI 612 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + L + I++FFD V++N D+ +++ NR+S++ I L V ++ Sbjct: 613 ------DDTKTYLESLFGLKNSIDLFFDSVMINHDNPKIKANRISIIGQIYKAFLKVADI 666 Query: 699 QKI 701 ++I Sbjct: 667 KEI 669 >gi|91070279|gb|ABE11197.1| glycyl-tRNA synthetase beta subunit [uncultured Prochlorococcus marinus clone HF10-88D1] Length = 720 Score = 479 bits (1232), Expect = e-132, Method: Composition-based stats. Identities = 179/751 (23%), Positives = 329/751 (43%), Gaps = 83/751 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA+ H E ++ L ++ + ++ + TP R+ L L+GL Sbjct: 1 MSKYLLEIGTEELPAKFSHSVLEQFKSLIEFELDKKLIKFEQIVVTSTPRRIVLLLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ +KI ER GP+ G+ A GF S + K+ KKG+ Sbjct: 61 DYAEDKIIERKGPKANSAYLNGSPTNAALGFANSLDIDVGELEI--KNTKKGEFVFGKKI 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + L +I+P ++ + P+ M+W + + RP++ I I E + Sbjct: 119 EKGLSTKISLSSIIPKLVKSLQGPRFMKWGAGN-----IKFSRPIRWIASIYNDEILDFE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + D +I N T HR ++VQ+ D + L+ V+ + R+ I + ++ Sbjct: 174 FDECD-PKIKISNKTKSHR-LINEVLEVQNPDDFFELLKRNRVIAIRKERKEKIESLINQ 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + ++ L+ + LL E+ LVEW + +G F ++L LP E++ +K++Q+ Sbjct: 232 ASKSLNLKPDLSEGLLNELTDLVEWPDLIIGKFSDEFLDLPVEVLSTVMKSHQRYVPLLL 291 Query: 295 REGVL----------ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 + + V + + I +GN +V+ AR DA F + D+ Sbjct: 292 KNKSFSKLDLSSEKNISTTFCVISNGLEESNNNIAKGNEKVLRARFSDAKFFVESDKKVA 351 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 +R +L V + +G +RV RI + KI + + Sbjct: 352 S--------------------IERNEKLK--SVSYLKGLGNIFQRVERIEEVTNKILKFL 389 Query: 405 D---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + + + A K DLC+EIV EFPELQG +G +Y + + C A+ EH P Sbjct: 390 NDKSLEEKKIIEAAKYCKNDLCSEIVFEFPELQGIMGGKYLKYEGFSEDVCLAVAEHYLP 449 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 + +P+ K VS+ADK++TLI+ + ++PSGS DPYALRR G+I+II + ++ Sbjct: 450 SFYKDALPSTKYGAIVSIADKVETLISIFISGKRPSGSSDPYALRRNLNGVIKIIWDYEL 509 Query: 522 DIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 D+PL + + +L F R+ +L + + +LI+A+ Sbjct: 510 DLPLDKLFKELIDFWKIVFPNLNFSRETVFNDLNEFLVQRIVSHLEEISLSKELIKAVCT 569 Query: 562 PE------NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE-- 613 + N++ + + IK + F + R+ ++ + +S Sbjct: 570 SDELSQKRVLNIVDLKNRIKSIMNFNEKDNIVEIQKVITRVSKLANNSDLSRDVLSTRDY 629 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ---VLV 670 ++ + + E +++ I + E Y ++ +L IE FD VL+ Sbjct: 630 VNTKLFEKDCELKVFEFIGELEKLFSEGY--CNYLELLNLFEINVNTIEDLFDNEKGVLI 687 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D ++R+NRL+LL I+N L + + + Sbjct: 688 MSEDLKIRNNRLNLLSLIRNYSLKIADFTLL 718 >gi|303233269|ref|ZP_07319941.1| glycine--tRNA ligase, beta subunit [Atopobium vaginae PB189-T1-4] gi|302480659|gb|EFL43747.1| glycine--tRNA ligase, beta subunit [Atopobium vaginae PB189-T1-4] Length = 701 Score = 479 bits (1232), Expect = e-132, Method: Composition-based stats. Identities = 202/729 (27%), Positives = 327/729 (44%), Gaps = 74/729 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +F+LEI +EE+P+ A + L+ I+ LK G+ Y ++ + +P RL + + GL+ Sbjct: 10 EFVLEIGAEEMPSAPLICATKQLAQIMERELKACGLAYDSLEAHNSPRRLVVLVHGLAAA 69 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EK + GP V G KA GF R G + K+D + + Sbjct: 70 TQEKHTTKRGPAVSIAYDAQGNLTKAGLGFARKAGATPEQLSK-KQDKDGKEYIWCDIFT 128 Query: 116 PKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P D+L I+ I K+ WP +S RW + S++RP++ I +L + Sbjct: 129 PSLRAHDLLGDIITNCITKLEWPNYRSQRWGA-----TTESFVRPVRWICALL-----ND 178 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I ++ N T GHR AP V S Y+ L +A V+L+ + RR IL+D Sbjct: 179 DVIPCTFADVTSSNYTLGHRVLAPGKHVVSSASAYLDVLHDAHVMLE-DERRQRILDDVA 237 Query: 234 RLASAV-GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A G+ + + +E++ L EW V +G FD ++L +P E+I ++ TNQ+ F Sbjct: 238 AYEKAHPGMHVDMPRGTFDEVVNLTEWPHVVIGEFDHQFLAIPHEIICESMLTNQRYFPI 297 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F++VSN + + ++ GN RVV ARL DA F+ D Sbjct: 298 YDADGALTCFFVIVSNAKP-EMDTHVIDGNERVVRARLSDAQFFYTED------------ 344 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---A 409 L PL+ + L V F K+G+ ++ R+R L + IA+ + D Sbjct: 345 --------LKAPLESYVPLLKR--VTFQEKLGSVFQKAVRMRDLAQTIAEACNFDAALTE 394 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+KADL T+ V EF QG +G +A E+ AI+EH PR ++V Sbjct: 395 HCARAAYLAKADLVTQTVVEFTSQQGVMGAYFAEACEEDPDVVAAIKEHYHPRFSGDSVA 454 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE----------- 518 + VSLADKLDT+ +AIN+ P+GS DP+ALRR+ LG I I+ E Sbjct: 455 QSTCGKVVSLADKLDTICGMFAINQPPTGSSDPFALRRSALGCIAILKELPRISLLSLIS 514 Query: 519 ---NKIDI---PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + D+ + FF RL D I +++ AI + Sbjct: 515 SSLARYDMQGTSCDTDATIHEISQFFLGRLGSLAKDEHISPEVVMAISAISIIDPQEFFA 574 Query: 573 LIKHLNEFFSS--AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 L + E ++ R I + + + L E++LY Sbjct: 575 RAHALEQVQQQQADVFEDLAIAYGRADHI------REAALGTTVDVDMLA-PTEQKLYNA 627 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + ++++++ ++ Y L ++ PI+ FFD + V +D +VR+NRL LL + Sbjct: 628 CLEGQDNVEKALSNRDYVVAASALAALRLPIDEFFDDIRVMDEDTKVRNNRLRLLNLFCS 687 Query: 691 IILIVINVQ 699 + V ++ Sbjct: 688 VFTNVADIS 696 >gi|283956628|ref|ZP_06374107.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 1336] gi|283791877|gb|EFC30667.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 1336] Length = 664 Score = 478 bits (1231), Expect = e-132, Method: Composition-based stats. Identities = 183/718 (25%), Positives = 327/718 (45%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNILEEYRMV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ G+ K+ K +V Sbjct: 60 DKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAGISENELAF--KEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L +V ++ + + KSMRW ++F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQKILGEMVEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++D + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVDFQSYGVKSAKKTFIHRSVSYDLKDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDYSK-IIHGNERVLRARLSDAMFFYQNDLQNGLQPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQFI 529 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 530 EDQN------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L F +RL + + ++A+L +N +L+ I + L + Sbjct: 502 SHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + EAE +LY + Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFTQEAESKLYKAFQE-------KTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|153952476|ref|YP_001397675.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. doylei 269.97] gi|152939922|gb|ABS44663.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 664 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 181/718 (25%), Positives = 332/718 (46%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELTNIEKKWKNILEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ + + K+ K +V Sbjct: 60 DKQEDSFTEFIGAPKNVAYKDGVLTPAGQSFLQKA--EISENELTFKEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L ++ ++ + + KSMRW ++F +IR ++SI CIL +K Sbjct: 118 TKGLQSQEILGEMIEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----NDK 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSAKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDYSK-IIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQFI 529 S V+LA+KLD+LI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDSLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 530 EDQN------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L F +RL + + ++A+L +N +L+ I + L + Sbjct: 502 SHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I S ++ + EAE +LY + T + + Sbjct: 559 DNFNENFTTFKRLANIATKN-------SHKVDENLFVQEAESKLYKAFQE-KTKVNSLQE 610 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 611 K------LENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYVEFLKIADLKEL 662 >gi|220909945|ref|YP_002485256.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 7425] gi|219866556|gb|ACL46895.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 7425] Length = 731 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 196/734 (26%), Positives = 317/734 (43%), Gaps = 97/734 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKG 58 M FLLE+ +EE+PA A E ++ LK + ++ TP RL + +KG Sbjct: 1 MFSFLLEVGTEELPASFVASALEQWRSLIPNSLKANLLQGDTTTVQVLGTPRRLAVLIKG 60 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 L P++ EE GP V G KA GF RS + + KG+ Sbjct: 61 LPQRQPDQEEEIKGPSVQAAFKDGQPTKAAMGFARSRNVDIADFDI--RATDKGEFVFVR 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + R ++L ++P I + + MRW + RP++ ++ +L + Sbjct: 119 QKITGRPTAELLTELIPQWIFGLEGKRFMRWGDGD-----LRFSRPIRWLVALL-----E 168 Query: 173 EKIIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++++ L L+ I I++GHR P P+ + + Y+ LE A VL+D + R+ I Sbjct: 169 DQVLPLTLENGATTISSDRISWGHRVLHPEPVTLLQAEDYLTALENAYVLVDSKQRQERI 228 Query: 229 LNDAHRLASAVGLELVEDK--DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 L + V + D DL+EE+ LVEW +G FD ++L LP+E+ +KT+ Sbjct: 229 LEQLQVIEKEVKGIVPPDAINDLIEEVTHLVEWPNAVLGKFDAEFLTLPKEVTITVMKTH 288 Query: 287 QKCFVTR-------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 Q+ F E +L FI +SN + I GN+RV+ ARL DA F+ Sbjct: 289 QRYFPVFDRAAFSQREELILLPYFITLSNGDPAQAN-LIALGNARVIRARLADAKFFYDA 347 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ ++PL+ + RL V F +G+ ++V R+ + + Sbjct: 348 DR--------------------AQPLEAYVPRLGQ--VTFQQALGSMYDKVQRMLAIAQF 385 Query: 400 IAQLI---DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 + I + + + RA +L KADL T++V EFPELQG +G +YA L E +AI Sbjct: 386 VCAQIKVPETEQQQILRATLLCKADLVTQMVGEFPELQGIMGADYARLSGEAAMVAEAIA 445 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 H P T+ + V+L D+LDTL++ + + PSGS DP+ALRRA IIRII Sbjct: 446 VHYLPPAIFTKTDTHLVGEVVTLVDRLDTLVSIFGLGLIPSGSSDPFALRRAANLIIRII 505 Query: 517 LENKIDIP-------------LSQFIEDQ-----------NLILFFHDRLKLYL-HDRDI 551 + P + QF L FF R++ L D I Sbjct: 506 YKIASKNPQLQLNLQQLLQQCIEQFTAKFAKSTPAATLLEQLEDFFLQRIRNTLDEDEQI 565 Query: 552 RHDLIEAILRPEN--------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 +DLI AIL + ++ +D K L + ++ + R ++ Sbjct: 566 DYDLINAILGEADPEYTQRALASIPDTIDRAKFLQQMRQDGSLDRIYETVNRASRLARQG 625 Query: 604 EKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 + + I + L +E+ Y + D + + + Y Q+ + + +I + Sbjct: 626 DLDTVTLDPASVIQTKLLKQPSEQAFYQALVDLLPQTKAAQASRNYRQLVEAIAAIAPTV 685 Query: 662 EIFFD---QVLVNV 672 FFD VLV Sbjct: 686 SRFFDGPESVLVMD 699 >gi|242309038|ref|ZP_04808193.1| glycyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] gi|239524462|gb|EEQ64328.1| glycyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] Length = 682 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 216/729 (29%), Positives = 334/729 (45%), Gaps = 77/729 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M FLLEI ++E+PA ++ L +L+ ++ + Y+TP RL + Sbjct: 1 MTTSFLLEIGTQELPAIPLLAEIPNIKQKLSKILQNHRLLC-DFDFYYTPRRLVIIANQF 59 Query: 60 SPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 ++ E GP G +A F + G+ I KD K ++ Sbjct: 60 PTSQSPQVLEFFGPPTTIAYKDGNPTQAALSFFKKCGITQEEASTITKDNK--EILYFKK 117 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 PK +D+L+TI ++ + + K+MRW S+IRP+ ILC+L Sbjct: 118 ESPKAPAQDLLQTITKEFLESLNFGKTMRWGDQKE-----SFIRPISWILCLL-----NN 167 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 I L+L + N T+ HR + P +V S+D+Y L+ MV+L+ E RR IL + Sbjct: 168 TPISLNLYGVVSQNQTFIHRNISFAPQEVTSIDNYFEILKRGMVILNQEDRRTKILQEIQ 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + S +++ D++LLEEI+ + E+ G F +++L LP I ++K NQ+ F T Sbjct: 228 EIQSQKNIKVEIDENLLEEIVCITEYPTALFGEFSERFLELPAPCIITSMKVNQRYFATY 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 E L N FI+VSN A D AI+QGN +V+ ARLEDAL F+ D N Sbjct: 288 KGE-NLYNGFIVVSNSLAQDSN-AIIQGNIKVLRARLEDALFFYHNDLKNGFMPE----- 340 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---------- 403 + +V F +G+ ++ R R + K IA L Sbjct: 341 -------------------KLKNVTFVEGLGSMWDKTQRERQIIKLIAPLFTKNLEKENQ 381 Query: 404 -IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 I + ++D+A + SKADL +E+V EF ELQG +G YA + AI+E P Sbjct: 382 DIGLTLEILDQASMFSKADLMSEMVYEFTELQGIMGYYYANALGYDSKVALAIKEQYLPN 441 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 +P+N IS V+LA KLD L ++I++ PSGS+DP+ALRRA +GII+IIL + Sbjct: 442 SEESPLPSNLISAFVALAYKLDNLFALFSIHKIPSGSRDPFALRRAAIGIIKIILHFNLS 501 Query: 523 IPLSQF----------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 L + + Q L F +R+ D L+ AIL N+L I Sbjct: 502 FDLQKISSLLSPLYKPFDLQQLENFILERMDSMF---DYNPSLLRAILATNEKNILQIYQ 558 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + LN +A + + KR+ I + N SL I LL E L+ Sbjct: 559 KLDALNSVLKNADKNLLMQTFKRVANITK---EVNLSSSLAIKQDKLLATEEIELHKAFC 615 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + Y + +L + + FFD+VLVN D + R+NR +L+ I Sbjct: 616 LYEEKSPTL----NYQEQLQMLLDLNPLLSRFFDKVLVNAPDEDFRNNRKNLIARIYQAF 671 Query: 693 LIVINVQKI 701 L + ++++I Sbjct: 672 LNIADIREI 680 >gi|283954794|ref|ZP_06372310.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 414] gi|283793634|gb|EFC32387.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 414] Length = 664 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 181/718 (25%), Positives = 329/718 (45%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + Y+TP RL + K + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNVLEEYRLL-SDFNFYYTPRRLVFFHKNFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ G+ + K+ K +V Sbjct: 60 NKQEDSFAEFIGAPKNVAYKNGNLTPAGQSFLQKAGIS--ENELTFKEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L ++ ++ + + KSMRW ++F +IR ++SI+CIL ++ Sbjct: 118 IKGLQSQEILGEMIDKFLKSLNFGKSMRWGA-----NSFEFIRAIRSIVCIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y + LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSAKKTFIHRNISYDLQDFNNAKEYFQLLEKNYIILDPLQRKERILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + + + ED++LL E++ + E+ +GSF++K+L +P E+I +++ NQ+ F Sbjct: 228 IENQENIRIGEDEELLAEVVAITEYPNALLGSFEEKFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + L+N FI+VSN D I+ GN RV+ ARL DA+ F++ D Sbjct: 288 -DKSLSNHFIVVSNAVCKDYSK-IIHGNERVLRARLSDAMFFYQND-------------- 331 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 L + + +++ +GT ++ R + + + Q+ D + Sbjct: 332 ----------LQSGLKPEKLAKMIYLEGLGTMQDKSLREIKIAEILCQIFHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQFI 529 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 530 EDQN------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L F +RL + + ++++L +N +L+ I + L + Sbjct: 502 SYYKSFDMQILKDFIFERLYTFYT---VNASFVKSVLSSKNTDLIHINQSVHALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + P E E +LY + Sbjct: 559 DNFHENFTTFKRLANIANKTLHK-------VDPTLFAQEIENKLYKAFQE-------KTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FFDQV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ADSLQEKLENLFALKPFIDEFFDQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|289547827|ref|YP_003472815.1| glycyl-tRNA synthetase subunit beta [Thermocrinis albus DSM 14484] gi|289181444|gb|ADC88688.1| glycyl-tRNA synthetase, beta subunit [Thermocrinis albus DSM 14484] Length = 654 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 214/711 (30%), Positives = 329/711 (46%), Gaps = 71/711 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+PAR+ A E L LLK ++ Y TP RL YLK Sbjct: 2 DLLIEIGTEELPARVIPLAVEYLRERFSVLLKR-----DDLITYATPRRLAFYLKDFKNE 56 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E +GP + G KA+ FL + ++KD +G Sbjct: 57 GEEREELIVGPPLSVAYQDGKPTKALLAFLDRVKAREEDLIHLQKD--RGTYVAVRRIVK 114 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++L + VP+PKSMRW + S + RP++ I + ++I+ Sbjct: 115 EESPLELLSKSFEEILLSVPFPKSMRWDS-----SGVRFSRPVRWICALW-----GDQIV 164 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 L I T GHRF + I++ S + Y++ L +A V+ R IL+ A Sbjct: 165 PLTFGNIKADRKTKGHRFLSSGWIELGSAEEYLQKLTDAYVIPQFNERLGLILSMLKEEA 224 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +G + L EE+ LVE+ V +GSF+ KYL LPE++I + +Q+ F R++E Sbjct: 225 YRLGGVPEYPEGLQEEVANLVEFPFVVVGSFEDKYLELPEKVIITVLAHHQRFFCVRSQE 284 Query: 297 -GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 L F+ VSN +G IV+G +VV ARLEDAL F+K D Sbjct: 285 EDRLLPFFLAVSNNAPKNG--EIVEGYRKVVKARLEDALFFYKED--------------- 327 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVD 412 L +PLDQ + +L VVFH + G+ ++ R+ L +KIA ++ + + Sbjct: 328 -----LKRPLDQLVEQLS--GVVFHPRAGSMWDKTIRVMELSQKIAGTLNLEEGIKEKIK 380 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSKADL T +VRE ELQG +G YA Q E+ A+ E P + VP + Sbjct: 381 RAAYLSKADLLTHMVREMDELQGYMGYVYAKAQGEDEEVARALYEQYLPARAHDPVPLSP 440 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-D 531 +S +SLADKLDT+ E P+GS DPY L+RA G++ II +++D+ + +E Sbjct: 441 VSYVLSLADKLDTIKTLLEAGEVPTGSSDPYGLKRAAFGVLAIIDAHQLDLHIDDLVEVS 500 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 L F +RL+ YL D++ A+L L ++ L++ + + + + Sbjct: 501 PKLEEFLRNRLEAYLEPYGQ--DVVRAVLSVHSPLRPLEVIKLVRSIANIREEERFKDVV 558 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 +R+ +IL +++ + L EAEKRLY + Sbjct: 559 EVYRRVVRILPKGWLEDK-----VKETLLREEAEKRLYEKLLQLEESPS----------- 602 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L I ++ FFD VLV D +R NRL+LL ++ ++ N I Sbjct: 603 LSDLWKIKPVVDEFFDSVLVMDKDEAIRTNRLALLMRVRKLMERFANFDLI 653 >gi|159903545|ref|YP_001550889.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9211] gi|159888721|gb|ABX08935.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9211] Length = 720 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 182/752 (24%), Positives = 315/752 (41%), Gaps = 84/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+P A L I++ L ++ + + + TP R+ L + L Sbjct: 1 MSTFLLEIGTEEMPPEFARLAPSQLHEIVVNDLAQKRLSHGRVICTSTPRRISLIISDLL 60 Query: 61 PHSPEKIEERLGPR------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + E+R GP G +A GF + + ++ KG A + Sbjct: 61 DRAEDFSEDRKGPPSTQAFINGVPSQAAIGFAKKYQILPEDLE--VRETSKGAFVYAKIL 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L +VP + +V + MRW + + + RP++ I+C+L +E Sbjct: 119 EKGLPASQLLVDLVPSWVNRVQGNRFMRWGSGET-----RFSRPIRWIVCLLDSEKLPIT 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I I NI+ HR P+ + S + Y+ L VL+ E R+ I + Sbjct: 174 LIG-TDPLIISDNISRPHRLF-DQPVTISSPNKYLELLRSVGVLVVREERQKLINSLIQN 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 ++ + DLL E+ +VE+ + SF + +L LP E++ +K +Q+ Sbjct: 232 ASNELKANPDLSLDLLNELTDIVEFPSLVKCSFSESFLRLPPEVLTTVMKVHQRYIPLYL 291 Query: 295 RE-----------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 + +L F+ +SN ++ G I QGN RV+ AR DA F D Sbjct: 292 KNIEIDPLALVSEKILHPSFLCISNGLSA-GENTIRQGNERVLKARFADARFFIDLD--- 347 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LS P QR +L V F + +G+ +RV RI L K++ + Sbjct: 348 -----------------LSIPSIQRNDQLKR--VTFASGLGSLYDRVERIVWLSNKLSTI 388 Query: 404 IDA---DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ D + RA L K DL +++V EFPELQG IG +Y + + E ++ EH Sbjct: 389 LNISKSDSLHLTRAAQLCKHDLVSQMVGEFPELQGLIGGKYLLSEGEPRDVALSVLEHYM 448 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR +++P + I +++ DKL+ L++ +A E+P+GS DPYALRR+ G+++I+ Sbjct: 449 PRSSNDDLPQSHIGSLLAILDKLELLVSIFAKGERPTGSSDPYALRRSANGVLQILWNKS 508 Query: 521 IDIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAIL 560 I + + Q + L FF R+ L + + D+++AI Sbjct: 509 ISLDVYQMLNLSVSYWRELFPNFNFNSHQLLNELTSFFRLRIISLLEESGVDSDIVQAIA 568 Query: 561 RPEND------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE- 613 + I+ K L S+ R ++ +S Sbjct: 569 GESISIERLLRDPNDILVRAKVLTNLRSTGDLSGVQFVVTRAKRLADKGTLPLDILSASD 628 Query: 614 -ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVL 669 + +E + V++ RY Q+ L + + FFD VL Sbjct: 629 VVDTSLFEKNSESEMLDVVNKLEP-FAICTSSTRYEQLATGLKDGKQSLSNFFDGEQSVL 687 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V ++ +R+NRL+LL ++N + + I Sbjct: 688 VMTENIPLRNNRLNLLSILRNQANELADFDLI 719 >gi|237752864|ref|ZP_04583344.1| glycyl-tRNA synthetase subunit beta [Helicobacter winghamensis ATCC BAA-430] gi|229375131|gb|EEO25222.1| glycyl-tRNA synthetase subunit beta [Helicobacter winghamensis ATCC BAA-430] Length = 683 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 196/727 (26%), Positives = 319/727 (43%), Gaps = 78/727 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 LLEI +EE+PA ++ +L+ + + Y+TP RL + Sbjct: 6 SPLLLEIGTEELPAIPFLAELPNIKNKFQKILEAKRLNCA-FDFYYTPRRLVIIANDFPK 64 Query: 62 HSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +I E GP + +A GF + G++ I+KD K ++ Sbjct: 65 IQNAEILEFFGPPLSIAYKDNTPTQAALGFFKKCGIEPKDTQTIEKDGK--EILYCQKSA 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L+ I+ ++ + + K+MRW + S+IRP+ ILC+L + KI Sbjct: 123 EQLPSNTLLEEIIKEFLESLNFGKTMRWGSLKE-----SFIRPISWILCLLDS-----KI 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I L L + TY HR + P + SL+ Y++ LE V+LD R++ ILN ++ Sbjct: 173 IPLKLYGVESKAQTYVHRNVSFEPFDINSLESYLQTLENNGVILDQNKRKDRILNAITQI 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 +++ D++LL E++ + E+ G F +L LP I ++K NQ+ F T + Sbjct: 233 EKTQNIQVEIDEELLNEVVAITEYPTALFGEFSAHFLELPAPCIITSMKVNQRYFATY-K 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L + FILVSN + I+ GN +V+ ARLEDAL F+ D NN Sbjct: 292 DGKLHHGFILVSNSLT-ENPEEIITGNVKVLRARLEDALFFYHNDLNNGFMPE------- 343 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL----- 410 + +V F +G+ ++ R R++ K + L + Sbjct: 344 -----------------KLKEVTFVEGLGSMWDKTERERLIVKALGDLFKESLQKGEQNL 386 Query: 411 ------VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 +D+A + SKADL +E+V EF ELQG +G YA AI+E P Sbjct: 387 GLAFEILDQACLFSKADLMSEMVYEFTELQGIMGYYYAKALRYEERVALAIKEQYLPNSE 446 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 +P+N IS ++LA KLD L+ ++I + PSGS+DP+ALRRA G+I+IIL + Sbjct: 447 ESVLPSNLISAIIALAYKLDNLLGLFSIGKIPSGSRDPFALRRAANGVIKIILHFNLPFN 506 Query: 525 LSQF----------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 L + + L F +RL L L+ A+L +L I + Sbjct: 507 LREVLQTLKNHYKDFDTTGLENFILERLDSTLE---FNPSLLRAVLATNERDLAQIFQKL 563 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 L+ + + + KR+ I + K + I LL E LY Sbjct: 564 TALDSALKNQDKQLLTQTFKRLANITKEVDLKGELL---IKEDKLLASEEIELYKSFKQC 620 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 Y + L ++ +E FFD+VLVN D + ++NR L+ I L Sbjct: 621 E------FSGNDYAKHLKSLLALSPILERFFDKVLVNAPDEDFKNNRKHLIARIYREFLN 674 Query: 695 VINVQKI 701 + ++++I Sbjct: 675 IADIKEI 681 >gi|78212759|ref|YP_381538.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9605] gi|78197218|gb|ABB34983.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9605] Length = 723 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 184/724 (25%), Positives = 306/724 (42%), Gaps = 86/724 (11%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLEI +EE+PA +A + L + L+E + + + + TP RL + + L Sbjct: 3 ATFLLEIGTEELPADFVRQALDQLQQRVGRDLREARLGHGVVSVFGTPRRLVVSVAELED 62 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ EER GP V G A GF + G+ Q +D KG A + Sbjct: 63 RQPDLQEERKGPPVAQAFKEGVPGPAAIGFAKRCGVDPSDLEQ--RDTPKGPCVFATVLT 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + ++L+ ++P I + + MRW T + RP++ +L + +E + Sbjct: 121 PGQASVELLQGLIPQWIDALQGRRFMRWGTGAQ-----RFSRPIRWLLALKGSELI-PVV 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D E+ + HR H P+ + S + + L A V++D R I + Sbjct: 175 LDGADPEVRSDRFSRAHRLHGDEPLSIASAEQFGETLAAAGVVVDRAERAKRIRTSLDQS 234 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT--- 292 A A L EE++ LVE ++ G+ +++L LP E+I ++ +Q+ Sbjct: 235 AQAANGTPDCPASLFEELVDLVEDPRILEGTIAERFLQLPPEVISTVMQAHQRYVPLQVP 294 Query: 293 --------RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 T E VL F+LV N A IV+GN RV+ ARL DA F D+ Sbjct: 295 GLEADPLRLTAEAVLRPQFLLVGNGLAP-ASTLIVRGNERVLGARLADAEFFLDVDRR-- 351 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 + R LD V F +G+ +R RI L + + + Sbjct: 352 ------------------QSSASRREALDR--VTFAEGLGSLLDRSERIERLTGLLLKQL 391 Query: 405 DADVALVD---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 D ++ D RA K DL +++V EFPELQG +G +Y + + E A+ EH P Sbjct: 392 GLDQSMADAAQRAAHFCKNDLVSQMVGEFPELQGLMGGKYLLEEGETREVALAVVEHYLP 451 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 RG + +P V+LA++L+ L++ +A E+P+GS DPYALRRA G+++I+ Sbjct: 452 RGAGDALPATPAGAVVALAERLELLLSIFAKGERPTGSSDPYALRRAGNGVVQILWGMAW 511 Query: 522 DIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 + L F+ +L R+ L D DL++A+ Sbjct: 512 RLDLMAFLSKAVEEWVALFPDFAVDASQLHNDLCQLMRQRIVSQLEDDGFAPDLVQAVAG 571 Query: 562 PEN------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLE 613 + L + I+ L + S + + +R ++ + ++ S Sbjct: 572 DAVSSQRLLSDPLDVKQRIQLLRDLRDSGQLDAVQAVVQRAAKLAEKGDLARDQLVASDV 631 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLV 670 + P+ +EK L+A + Q+ + Y + D L + ++ FFD V+V Sbjct: 632 VEPERFESASEKDLFAALEQLQPMAQQ----RSYQALADALVAATPALQAFFDGETSVMV 687 Query: 671 NVDD 674 VDD Sbjct: 688 MVDD 691 >gi|88596501|ref|ZP_01099738.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|148926232|ref|ZP_01809917.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8486] gi|218562846|ref|YP_002344625.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|88191342|gb|EAQ95314.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|112360552|emb|CAL35349.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845403|gb|EDK22496.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8486] gi|315927143|gb|EFV06494.1| Glycyl-tRNA synthetase beta subunit [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 664 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 181/718 (25%), Positives = 328/718 (45%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ + K+ K +V Sbjct: 60 DKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKARISENELSF--KEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L +V ++ + + KSMRW ++F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMVEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDYSK-IIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQFI 529 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 530 EDQN------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L F +RL + + ++A+L +N +L+ I + L + Sbjct: 502 NHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + + EAE +LY + Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAFQE-------KTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|260583948|ref|ZP_05851696.1| glycyl-tRNA synthetase, beta subunit [Granulicatella elegans ATCC 700633] gi|260158574|gb|EEW93642.1| glycyl-tRNA synthetase, beta subunit [Granulicatella elegans ATCC 700633] Length = 691 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 188/716 (26%), Positives = 344/716 (48%), Gaps = 68/716 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ ++E L+ + K+E + ++++ + TP RL + + GL ++IE GP Sbjct: 15 PAQYVRTSSEQLATRVEDFFKQENLAFESVEAFATPRRLAVRVNGLEEEQKDRIEIFKGP 74 Query: 74 ------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTI 127 + GA KA +GF+R GL T + K D + ++V+K Sbjct: 75 SLAIAQKDGAWTKAAEGFVRGKGLTTDD--IYVETIKDVDYIHVKQLLKGKSTKEVVKN- 131 Query: 128 VPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGN 187 + I + +P +MRW+ F ++RP+ I+ + E +E + ++ G Sbjct: 132 LSSVITDMKFPVTMRWAAH-----TFEYLRPIHWIVALYGEEVIEEIQV----LDVKAGR 182 Query: 188 ITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDK 247 ++ GHRF ++ S + Y + L E V+++ + R+ + LA+ + D+ Sbjct: 183 VSRGHRFLGKDT-EIASPEQYEKALAEQFVIVNQDERKALVRKQIEELAAKNAWIVPIDE 241 Query: 248 DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVS 307 +LLEE+ ++E+ F G+FD+KYL +PE ++ ++K +Q+ FV +G L FI Sbjct: 242 ELLEEVSSILEYPTAFAGTFDEKYLVVPEPVLVTSMKEHQRYFVVYNAKGKLQPYFISAR 301 Query: 308 NIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQ 367 N + +GN +V+ ARLEDAL F++ D+ P+ Sbjct: 302 NG-NDYMIENVAKGNQKVLTARLEDALFFYEEDK--------------------KVPMTA 340 Query: 368 RMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---RAIVLSKADLCT 424 + +L+ L+ FHAKIG+ E+++R+++L +IA ++ D V+ RA + K DL T Sbjct: 341 FLKKLETLN--FHAKIGSMTEKMNRVQLLVGRIASELNLDAKDVETAQRAAEIYKFDLVT 398 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 +V EFPELQG +G+ Y+ E AI EH P +P++ +++ADKLD Sbjct: 399 NMVGEFPELQGIMGEIYSKNYGETPEVARAIREHYMPISADAELPSSVPGALLAIADKLD 458 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------------- 530 T ++F A P+GS DPYALRR +G+++I+ + + + F + Sbjct: 459 TFLSFTAAGMLPTGSNDPYALRRQVMGLVQILEAFEWHLDIDDFAKTLLALDYASFLVDK 518 Query: 531 ----DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 ++ F +RL + RHD+IEA+L ++++ + + L + ++++ Sbjct: 519 KEDVQAFILGFIRERLAQRMTSISKRHDVIEAVLNSNSNSVPEKMQAVAVLEKEVTTSEI 578 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + + R+ I A + R S E S + E+E++L I+ + ++ Sbjct: 579 KDITEALNRVINISAKGFDEARH-SSEYSLDKVETESERQLVESIATLRKDFENYSAEEK 637 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + SI I FF++ +V VD+ E+R NRL L+ + +IL + +++ Sbjct: 638 F----AAFASITPKIHEFFNENMVMVDNEEIRTNRLRFLRELALMILEFADFTELI 689 >gi|205356253|ref|ZP_03223019.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8421] gi|205345858|gb|EDZ32495.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8421] Length = 664 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 181/718 (25%), Positives = 327/718 (45%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ + K+ K +V Sbjct: 60 DKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKARISENELSF--KEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L +V ++ + + KSMRW ++F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMVEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDYSK-IIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQFI 529 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 530 EDQN------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L F +RL + + ++A+L N +L+ I + L + Sbjct: 502 NHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSHNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + + EAE +LY + Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAFQE-------KTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|271969909|ref|YP_003344105.1| glycine--tRNA ligase [Streptosporangium roseum DSM 43021] gi|270513084|gb|ACZ91362.1| Glycine--tRNA ligase [Streptosporangium roseum DSM 43021] Length = 991 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 179/727 (24%), Positives = 312/727 (42%), Gaps = 74/727 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 EI EE+P +AA+ + L L + + ++ +P R+ ++ ++P Sbjct: 310 TLAFEIGVEELPPAETTRAADAVRQALTEKLAATRLRHGSVTVMSSPRRIVALVEDIAPR 369 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + GPR+ GA KA GF R G+ + G+ V Sbjct: 370 EDDDEQTVRGPRLSAAYDAEGAPTKAAQGFARGQGIDVAELAPL--SAGGGEYVGYVKHV 427 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R +VL I+P + + K+MRW S+ RP++ I +L AE + Sbjct: 428 PGRPAGEVLAAILPEIVTGLRAEKNMRW-----RSPGLSYSRPIRWITALLGAE-----V 477 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + ++ G + HR A I + + Y+ L + D RR+ I+ A RL Sbjct: 478 VPFTVADLASGRSSRVHRTAAEPVITLSTATGYVETLRRHAIEPDAAVRRDDIVEQAARL 537 Query: 236 ASAVGLELVEDKD--LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+ G + + + L++E+ LVE +G+FD+KYL LP ++ +K +Q+ F Sbjct: 538 AAGAGGRIDFEAESALVDEVTNLVEAPVAILGTFDEKYLELPAAILTTVMKKHQRYFPVL 597 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L N F+ ++N A+ GN V+ AR EDA FW+ D Sbjct: 598 DGDGRLLNRFVTIANGACDH--DAVRAGNGAVLRARYEDAGFFWRND------------- 642 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVAL 410 L+ PL + RL + F ++G+ ER RI + +A L D Sbjct: 643 -------LATPLTEMKRRL--ARLTFETRLGSVAERADRIDAIASDLAARALLGGDDGET 693 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA L+K DL +E+V E L G + +EYA E + +A+ E PR + +P Sbjct: 694 LRRAGRLAKFDLGSELVIELSSLAGVMAREYARQAGEPEAVAEALYEMELPRQAGDALPR 753 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK--IDIPLSQF 528 ++ ++LAD+ D L +AI +P+GS DP+ LRRA LG+I I+ + + L + Sbjct: 754 SRPGALLALADRFDLLAGLFAIGSEPTGSSDPFGLRRAALGVINILRAHPDLAGLTLREA 813 Query: 529 IE--------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + ++ F R + + ++ I A+ D+ + + Sbjct: 814 LAIAASHQPVPTDARLPDQVLDFVRRRFEQLMLEQGHPAANIRAV-AGLVDSPVRAEQTL 872 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 HL S+ ++ + +RI +I+ + P AE+ L + Sbjct: 873 DHLAALLSTEDFQELEAAVQRIRRIIPAG------ATPGYDPGLFDSPAEEGLATALEKA 926 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ D +R+ + P+ +FFD+VLV DD VR NRL LL + ++ Sbjct: 927 RAGLRGETDLRRFAA---EAAVVVHPVTVFFDEVLVMADDPAVRANRLGLLAAVHDLADG 983 Query: 695 VINVQKI 701 ++ +++ Sbjct: 984 YLDWKEL 990 >gi|57238106|ref|YP_179356.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni RM1221] gi|57166910|gb|AAW35689.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni RM1221] gi|315058666|gb|ADT72995.1| Glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni S3] Length = 664 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 178/718 (24%), Positives = 327/718 (45%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ + K+ K +V Sbjct: 60 DKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKARISENELSF--KEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L +V ++ + + KSMRW ++F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMVEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDYSK-IIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L + +E + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKKFDIQILLEKLS 501 Query: 534 ----------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L F +RL + + ++A+L +N +L+ I + L + Sbjct: 502 NHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + + EAE +LY + Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAFQE-------KTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|260436306|ref|ZP_05790276.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 8109] gi|260414180|gb|EEX07476.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 8109] Length = 721 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 178/724 (24%), Positives = 303/724 (41%), Gaps = 86/724 (11%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLEI +EE+PA +A + L + L+E + + + + TP RL + + L Sbjct: 3 ATFLLEIGTEELPADFVRQALDQLQQRVSRDLREARLAHGAVSVFGTPRRLVVSVADLED 62 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ E+R GP V G A GF + G+ + Q +D KG A + Sbjct: 63 RQPDLQEDRKGPPVAQAFKDGIPGPAAIGFAKRCGVDPSALEQ--RDTPKGPCVFATVLT 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + ++L+ ++P I + + MRW T + RP++ +L + +E + Sbjct: 121 PGQACVELLQGLIPQWIDALQGRRFMRWGTGAQ-----RFSRPIRWLLSLKGSEVI-PVV 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + E+ + HR H P+ + S + + L A V++D R I + Sbjct: 175 LGGADPEVRSDRFSRAHRLHGDEPLSIASAEQFGETLAAAGVVVDRAERAKRIRTSLDQS 234 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A + L EE++ LVE ++ G+ +++L LP E+I ++ +Q+ + Sbjct: 235 AQAANGTPDCPESLFEELVDLVEDPKILEGTIAERFLQLPPEVISTVMQAHQRYVPLKVP 294 Query: 296 -----------EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 E VL F+LV N A + IV+GN RV+ ARL DA F D+ Sbjct: 295 GLEADPLRLTAEAVLRPQFLLVGNGLAP-ASSLIVRGNERVLGARLADAEFFLDVDRR-- 351 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 + R LD V F +G+ +R RI L + + + Sbjct: 352 ------------------QSSASRREALDR--VTFAEGLGSLLDRSERIERLTGLLLKQL 391 Query: 405 DAD---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 D V +RA K DL +++V EFPELQG +G +Y + + E A+ EH P Sbjct: 392 GLDESVVDTAERAAHFCKNDLVSQMVGEFPELQGLMGGKYLLEEGEPRDVALAVVEHYLP 451 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 RG + +P V+LA++L+ L++ +A ++P+GS DPYALRRA G+++I+ Sbjct: 452 RGAGDALPATPAGAVVALAERLELLLSIFAKGQRPTGSSDPYALRRAGNGVVQILWGMAW 511 Query: 522 DIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 + L F+ +L R+ L D DL++A+ Sbjct: 512 RLDLMAFLSIAVEEWAAQFPAFAVDASQLHYDLCQLMRQRIVSQLEDDGFAPDLVQAVAG 571 Query: 562 PEN------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLE 613 + L + I+ L + S + + +R ++ + ++ Sbjct: 572 DAVSSQRLLSDPLDVKQRIQLLRDLRDSGQLDAVQAVVQRAAKLAEKGDLARDQLVAGDV 631 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLV 670 + P +EK L+A + + Y + D L + ++ FFD V+V Sbjct: 632 VKPGRFESASEKDLFAALEQLQP----LAQQRSYQSLADALVAATPALQAFFDGDTSVMV 687 Query: 671 NVDD 674 VDD Sbjct: 688 MVDD 691 >gi|284926458|gb|ADC28810.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni IA3902] Length = 664 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 181/718 (25%), Positives = 328/718 (45%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ + K+ K +V Sbjct: 60 DKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKARISENELSF--KEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L +V ++ + + KSMRW ++F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMVEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDYSK-IIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQFI 529 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 530 EDQN------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L F +RL + + ++A+L +N +L+ I + L + Sbjct: 502 NHYKSFDMQILKDFIFERLYTFY---AVNASFVKAVLSSQNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + + EAE +LY + Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAFQE-------KTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|160902553|ref|YP_001568134.1| glycyl-tRNA synthetase, beta subunit [Petrotoga mobilis SJ95] gi|160360197|gb|ABX31811.1| glycyl-tRNA synthetase, beta subunit [Petrotoga mobilis SJ95] Length = 689 Score = 475 bits (1223), Expect = e-131, Method: Composition-based stats. Identities = 183/725 (25%), Positives = 329/725 (45%), Gaps = 74/725 (10%) Query: 6 LEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPE 65 EI E++P L L L++ + + +M + +P R Y+ GL P+ Sbjct: 7 FEIGVEDLPPSEFDNILTQLEEGLKKSLEKNDLNFLSMNIFISPRRFGAYIVGLPDKQPD 66 Query: 66 KIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 K E+R GP KA++GF + G+Q ++ + K Sbjct: 67 KKEKRKGPPKKICFDENNQPTKALEGFAKGQGVQVKDVKF--ENNDGAEYAYIEFVKAGE 124 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 + +L+ I+P I + + KSMRW + ++++RP+ +L + E I++ Sbjct: 125 PTKIILQNIIPELITNMNFAKSMRWGKGN-----YTFVRPVHWVLGLYNRE-----ILEF 174 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 ++ N +YGHRF I + + + +L++ V+ E R I + L Sbjct: 175 EMFNEKSSNKSYGHRFFGEEMI-ITNPQTFFSELKKNYVIPLYEERIEVIEREIQELEDE 233 Query: 239 VGLEL--VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +++ E +DL+ EI + E+ + +GSFD+KYL LP E+I +T++ +Q+ F ++ Sbjct: 234 YNIKISLEEHEDLIREIAKMTEFPKGVVGSFDEKYLFLPPEIIIVTVRHHQRSF-VAMKD 292 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G + N +I + + + G +RV+ ARL+DA +++ D Sbjct: 293 GKVINKYIAFQDGFGR--KSNVTNGYTRVINARLDDAAFYYEDD---------------- 334 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV-DRAI 415 L + +R+ L + + ++G E+ RI L KIA+ + + V RA Sbjct: 335 ----LKTDIQKRLEDLK--SITYQVELGNYREKCERISTLSSKIAEKLGFENLDVVKRAG 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L K D+ +++V EFPELQG + + Y + EN EEH KP + + N ++ Sbjct: 389 LLCKIDIPSKVVYEFPELQGIMARIYLKHKGENEDVFLTAEEHYKPLSENDEISQNLVAN 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 VS+ADK+D LI ++ I + PSGSKDP+ALRR GI+RI++ + D+ L + I+ Sbjct: 449 IVSIADKIDDLIGYFGIGKIPSGSKDPFALRRKAFGILRILISMEWDLNLKELIDLSEKV 508 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + L F +RL L +I + I ++L L K Sbjct: 509 FAESGKSNISIKPVEVELKSFLSNRLGTILERENISAEAINSVL-INVYKPLRAYLAAKS 567 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L++F + + F+ + +R+ I S E + + E EK L+ + + Sbjct: 568 LDKFIKKEEFQDFITAFQRVNNISKN------HYSQEYHGRLFVEEEEKTLFQKYLEVKS 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + Y + L S+ E I+ +FD + V +D +R NRL L+ + + + Sbjct: 622 QFENCLKKLDYDGAIESLISLKENIDRYFDNIFVMSEDESIRSNRLGFLKSLSALFYEIG 681 Query: 697 NVQKI 701 +V+K+ Sbjct: 682 DVEKL 686 >gi|86150570|ref|ZP_01068793.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85838921|gb|EAQ56187.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni CF93-6] Length = 664 Score = 475 bits (1223), Expect = e-131, Method: Composition-based stats. Identities = 180/718 (25%), Positives = 328/718 (45%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ + K+ K +V Sbjct: 60 DKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKARISENELSF--KEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L +V ++ + + KSMRW ++F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMVEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN + I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKNYSK-IIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQFI 529 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 530 EDQN------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L F +RL + + ++A+L +N +L+ I + L + Sbjct: 502 NHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + + EAE +LY + Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAFQE-------KTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|307299163|ref|ZP_07578964.1| glycyl-tRNA synthetase, beta subunit [Thermotogales bacterium mesG1.Ag.4.2] gi|306914959|gb|EFN45345.1| glycyl-tRNA synthetase, beta subunit [Thermotogales bacterium mesG1.Ag.4.2] Length = 678 Score = 475 bits (1222), Expect = e-131, Method: Composition-based stats. Identities = 177/725 (24%), Positives = 319/725 (44%), Gaps = 77/725 (10%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLE+ EE+P+ L + L + Y + + R + + G Sbjct: 1 MSDHKALLEVGIEELPSSEVQGIKTQLKERIERSLDNNRLGYGELEVFVASRRFGVLIHG 60 Query: 59 LSPHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + +E++ GP + G +A+ GFLR + Q +G Sbjct: 61 IELKQSDFVEKKKGPSEKIAYKEGEPTRALLGFLRGSNAQLEDVSV------EGGYVYVQ 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ E++L I +++ + + K MRW + + RP+K I +L E Sbjct: 115 REIIGKMAEELLPQIFSESLRSLEFKKPMRWGDG-----TYRFARPVKWITAMLDTE--- 166 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I+D++L N + GHRF S ++Y +++ +A+V+ R L++ Sbjct: 167 --ILDMELFGKRSSNKSRGHRFFFDE--VEVSPENYFQNMRDALVIARESDREERTLSEI 222 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R+ S + ++ D++LL E++ L E+ +G+F +KYL LP E+I +TIK +Q+ F Sbjct: 223 RRIESDIHSQIPVDQELLAEVVSLTEYPTAVLGNFMEKYLSLPPEVIIVTIKHHQRTFPV 282 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L N F+ + A D I G V+ ARLEDA ++++D+ Sbjct: 283 Y-KEGKLTNNFVAFQDGPA-DPLGNIRLGYEEVINARLEDAFFYFEKDKE---------- 330 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 +P +Q + L ++F +GT ++ R L +I++ + A ++ Sbjct: 331 ----------RPFEQYVDGLQ--GILFQRGLGTLRDKTERTTALSSEISRRLKAKSDELF 378 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V+R +L+KAD T +V+EFPELQG +G+ YA E IEEH + VP Sbjct: 379 EVERTALLAKADQITRVVQEFPELQGIMGRIYAEASGEKSGVALGIEEHYRDIL----VP 434 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 T V ++D++DTL +AI PS SKDPYALRR I R + + L + + Sbjct: 435 TTLTGAVVGVSDRIDTLAGNFAIGNIPSASKDPYALRRKASFIFRTMHHLGWKLDLLELL 494 Query: 530 ED-------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 E +L FF R + +L +R ++ ++ + V + Sbjct: 495 ERALNNLNKTSEETLDSLKDFFSSRYEAFLLERGFSMNIARSV-KMWWRFPYLGVRAAEA 553 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++E+ + L++ +R+ I + +AE+ L Sbjct: 554 ISEYVKNEDFNDLLIAYQRVHNISR------GHSGNSFDGSKFIEQAERDLLNNYLKCFD 607 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + E+++ + + LL S+ I+ +FD V V + ++R NRL L+ + + L + Sbjct: 608 DVMEALERDDFEKSLQLLTSLKPHIDRYFDDVFVMAEQEDIRLNRLGFLKSVDQLFLKIG 667 Query: 697 NVQKI 701 ++ + Sbjct: 668 DLSLL 672 >gi|229824060|ref|ZP_04450129.1| hypothetical protein GCWU000282_01364 [Catonella morbi ATCC 51271] gi|229786414|gb|EEP22528.1| hypothetical protein GCWU000282_01364 [Catonella morbi ATCC 51271] Length = 681 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 197/727 (27%), Positives = 329/727 (45%), Gaps = 77/727 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI EEIPAR ++ L + L EE + Y+++ Y TP RL + + GL+ Sbjct: 1 MAEFLLEIGMEEIPARFLLDLSQQLEKRVADFLAEERLAYESLSAYATPRRLAVLVHGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S + + GP + G KA GF++ G + I + K D Sbjct: 61 ERSQDVSTKAKGPSLKIAKDAEGNWTKAALGFIKGQGAS--QEDVIIESIKGEDYIFVNK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P + + VL + ++ + +P +M W +P +IRP+ I+ +L + Sbjct: 119 HLPGQAADQVLLG-LNRVLEAMTFPVTMTWHDYETP-----FIRPIHWIVALL-----DQ 167 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ L+ + I+ GHRF + + Y+ L E VL+D E RR I Sbjct: 168 ALVPLEFVGVKSDRISRGHRFLGHD-VTLAQATDYVEALREQHVLVDFEERRANIRQQLA 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LASA G ++ D+DLLEE+ +VEW VF G F+ KYL +P ++ ++ +Q+ F Sbjct: 227 NLASAQGWQVPVDEDLLEEVTAIVEWPTVFYGDFEDKYLSVPHCVLITAMRDHQRYFYAL 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI V N A +V+GN +V+ ARLEDAL F++ D Sbjct: 287 DAKGELLPVFISVRNG-NDQHLANVVKGNQKVLRARLEDALFFYQED------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 L L+ + +L +V H K+GT ++ R+ L +++ ++ D Sbjct: 333 -------LKHDLNFFVDKL--ANVNEHFKLGTLADKQVRVGALIRQLQSNLNLDQASYEA 383 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA + K DL T++V EF ELQG+IG+ YA E AI P +P Sbjct: 384 ALRASQIYKFDLMTQVVGEFDELQGQIGEIYARHYGEEALVAQAIGTQYLPTTSGGALPN 443 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 S ++LADKLDTL ++ + P+GS DPYALRR +GI+ I+L+ ++ L + Sbjct: 444 QDASALLALADKLDTLFQYFKVGLIPTGSNDPYALRRTAMGIVEILLDRGWELDLLPVFK 503 Query: 531 D------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + L F R+ ++L ++ + D I+ I ++ + ++ Sbjct: 504 QLVEAQEGDQELLKQLADFVWARVAVHLRNQSVDMDQIQGIGAAKHLEVG----KANYVA 559 Query: 579 EFFSSAKGEKFLLSAKR----IFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 F + K + + KR I +++ + K E L + ++E +L + Sbjct: 560 HFLKTHKDKN-PTAYKRFLEAITRVVNLGAKVQEETQLNLD--LAQTDSEAKLLEAAAKI 616 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + L ++ IE +FD VN DD +R NRL+ L+ + +L Sbjct: 617 DQYKISV------DALYMYLDNLVPVIEAYFDDNKVNADDETIRANRLATLKVLTEAVLE 670 Query: 695 VINVQKI 701 + + ++ Sbjct: 671 LFD-SRL 676 >gi|145640587|ref|ZP_01796170.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae R3021] gi|145274513|gb|EDK14376.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.4-21] Length = 541 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 172/575 (29%), Positives = 277/575 (48%), Gaps = 53/575 (9%) Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 MRW+ +IRP+ ++ +L +++I+ ++ + GHRF Sbjct: 1 MRWAD-----KTVQFIRPVHTVTMLL-----GDELIEGEILGVASARTIRGHRFLGEKEF 50 Query: 201 KVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEW 259 ++Q D Y + L E V+ D R+ IL + A+A+G ++ LLEE+ LVE+ Sbjct: 51 EIQHADQYPQLLREKGSVVADFNERKAEILAKSQAKATALGGVADIEESLLEEVTSLVEY 110 Query: 260 VQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIV 319 V F++++L +P E + T+K +QK F ++G L FI VSNI D AI+ Sbjct: 111 PNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYDKDGKLLPHFIFVSNINPED-PTAII 169 Query: 320 QGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVF 379 +GN +VV RL DA F+K D L + L R+ RL+ V+F Sbjct: 170 EGNEKVVRPRLTDAEFFFKTD--------------------LKQKLVDRLLRLET--VLF 207 Query: 380 HAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGK 439 ++GT ++ RI L +IA+ I AD A RA +LSK DL T +V EF + QG +G Sbjct: 208 QQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRAGLLSKCDLMTNMVFEFTDTQGVMGM 267 Query: 440 EYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGS 499 YA E+ A+ E PR + +P + ++ V+LADK DTL + I + P GS Sbjct: 268 HYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVASAVALADKFDTLTGIFGIGQAPKGS 327 Query: 500 KDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------------NLILFFHDRLKL 544 DP+ALRRA LG +RII+E + + L ++ +++ F R + Sbjct: 328 ADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAALFGDKLTNQNVVADVVDFMLGRFRA 387 Query: 545 YLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE 604 + D I D+I+A+L ++ ++ F + E + KR+ ILA Sbjct: 388 WYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSHFRTLDSAEALAAANKRVSNILAKAG 447 Query: 605 KKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIF 664 EI+L + AEK L + T +Q + Y + D L ++ P++ F Sbjct: 448 AAIGEINLTA----CVEPAEKALAEAVLALRTEVQPLIAQGDYTTVLDKLANLRAPVDNF 503 Query: 665 FDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 FD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 504 FDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 538 >gi|222823610|ref|YP_002575184.1| glycyl-tRNA synthetase, beta subunit [Campylobacter lari RM2100] gi|222538832|gb|ACM63933.1| glycyl-tRNA synthetase, beta subunit [Campylobacter lari RM2100] Length = 664 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 186/715 (26%), Positives = 341/715 (47%), Gaps = 72/715 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+E+ +EE+PA K ++S +L+E + + ++TP RL + Sbjct: 3 LLIEVGTEELPAIPLLKELPNISQKWEKILQEYHLE-AEFKFFYTPRRLVFIHENFKEKQ 61 Query: 64 PEKIEERLG-PRV-----GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E +G P+ G +A FL +G + K+ K +V + Sbjct: 62 DDSFVEFIGAPKTIAYKDGKLTQAGLSFLEKSG--LKEEELEFKEIKGKEVLYCQKQVQG 119 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 ++VL ++ ++ + + K+MRW +F +IR ++S+ CIL +++++ Sbjct: 120 LQSKEVLAKMIETFLKSLSFGKTMRWGDG-----SFEFIRAIRSLCCIL-----NDELVE 169 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + T+ HR + I +++D Y + LE+ V+LD E R+ I+ L Sbjct: 170 FESYGVKSAKSTFVHRSVSYDLISFKNIDEYFKILEKNYVILDQEQRKKLIIEQLKTLEK 229 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + ED +LL E++ + E+ + +G F+K+YL +P E+I +++ NQ+ F + Sbjct: 230 ENDIMISEDDELLAEVVAITEYPKALLGHFEKEYLEIPSEVIITSMRENQRYFAVF-KNN 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N F++VSN D I+ GN RV+ ARL DA+ FWK D Sbjct: 289 TLSNHFVVVSNAVCKDYSK-IINGNERVLRARLSDAMFFWKND----------------- 330 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIV 416 L Q + + +V+ +GT +++ R + + K+ ++ + + +AI Sbjct: 331 -------LAQGLNNDKISQMVYLEGLGTLKDKIIREQKVATKLCEIFANTQKNEILKAIE 383 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 SKADL T++V EF +LQG +G YA + AI+E P G +P+N+ S Sbjct: 384 YSKADLSTQMVYEFTDLQGIMGSYYAKAMGMSDEIALAIKEQYLPNGDNSAMPSNEFSSI 443 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--- 533 V+LA+KLDTL+ ++I + PSG+KDPYALRRA G+++IIL + L F+E Sbjct: 444 VALANKLDTLMGLFSIGKIPSGTKDPYALRRAANGVLKIILALNKNFDLKVFLEAIASEY 503 Query: 534 -------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 L+ F +RL + + I+A+L +N +++ I IK L + + A Sbjct: 504 KSFDLKILLDFILERLYTFY---NANPSFIKAVLSSKNYDIVYIDSCIKALIQSANKADF 560 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + + KR+ I+ + E +I+ + EK LY Sbjct: 561 SQNFATFKRLANIVVLSE-------AQINENLFNTQEEKDLYQAFMQCKAK------ENN 607 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ + L ++ I+ FFD+V++N D +++NR +L+ I + L + +++++ Sbjct: 608 TQELLESLFALKPQIDAFFDKVMINDKDENIKNNRQALVCAIYHEFLKIADIKEL 662 >gi|145628143|ref|ZP_01783944.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.1-21] gi|144979918|gb|EDJ89577.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.1-21] Length = 534 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 170/563 (30%), Positives = 274/563 (48%), Gaps = 48/563 (8%) Query: 153 FSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL 212 +IRP+ ++ +L +++I+ ++ + GHRF ++Q D Y + L Sbjct: 1 MQFIRPVHTVTMLL-----GDELIEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLL 55 Query: 213 EEAM-VLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKY 271 E V+ D R+ IL + A+A+G ++ LLEE+ LVE+ V F++++ Sbjct: 56 CEKGSVVADFNERKAEILAKSQAKATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERF 115 Query: 272 LCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLE 331 L +P E + T+K +QK F ++G L FI VSNI D AI++GN +VV RL Sbjct: 116 LAVPAEALVYTMKGDQKYFPIYDKDGRLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLT 174 Query: 332 DALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVS 391 DA F+K D L + L R+ RL+ V+F K+GT ++ Sbjct: 175 DAEFFFKTD--------------------LKQKLVDRLPRLET--VLFQQKLGTLKDKTD 212 Query: 392 RIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 RI L +IA+ I AD A RA +LSK DL T +V EF + QG +G YA E+ Sbjct: 213 RIEQLAGEIAKQIGADEAKAKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEV 272 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 A+ E PR + +P + ++ V+LADK DTL + I + P GS DP+ALRRA LG Sbjct: 273 AVALNEQYMPRFAGDELPKSLVASAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALG 332 Query: 512 IIRIILENKIDIPLSQFIEDQ---------------NLILFFHDRLKLYLHDRDIRHDLI 556 +RII+E + + L ++ +++ F R + + D I D+I Sbjct: 333 ALRIIVEKNLPLDLEDLVKKSAALFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVI 392 Query: 557 EAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISP 616 +A+L ++ ++ F + E + KR+ ILA + EI+L Sbjct: 393 QAVLARRPTRPADFDARVRAVSHFRTLDSAEALAAANKRVSNILAKADAAIGEINLTA-- 450 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 + AEK L + T +Q + Y + D L ++ P++ FFD V+VN +D Sbjct: 451 --CVEPAEKALAEAVLALRTEVQPLIAQGDYTTVLDKLANLRMPVDSFFDNVMVNAEDPA 508 Query: 677 VRDNRLSLLQYIKNIILIVINVQ 699 +R NRL++L ++ + L V ++ Sbjct: 509 LRQNRLAILNTLQGLFLQVADIS 531 >gi|157413188|ref|YP_001484054.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9215] gi|157387763|gb|ABV50468.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9215] Length = 719 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 188/751 (25%), Positives = 334/751 (44%), Gaps = 83/751 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA H + ++ + + + TP R+ L L+GL Sbjct: 1 MSKYLLEIGTEELPANFSHYVLNQFKSQIEFEFDKKLIKFDKISCTSTPRRIVLLLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++I R GP+ G KA GF S G+ ++ +KG+ Sbjct: 61 DSGDDEIIIRKGPKASSAYINGTPTKAAVGFANSLGIDVDDLEI--ENTEKGEFVFGKKV 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + L I+P I+ + P+ M+W + F + RP++ ++ I E Sbjct: 119 RKGESTRISLSLIIPKVIKSLQGPRFMKWGNGN-----FKFSRPIRWLVSIYNDEILDFN 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +D +I GN++ HR I++ S D+Y L E VL+ E R+ ILN ++ Sbjct: 174 -LDECDPKIVVGNLSKSHR-LIDRVIEINSPDNYFEILAENGVLVQREERKEKILNFINQ 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + ++ L+ +LL E+ LVE+ V G F++++L LP E++ + +K++Q+ Sbjct: 232 SSESLNLKPDLSDELLNELTDLVEFPNVITGKFEEEFLDLPVEVLSMVMKSHQRYVPLLK 291 Query: 295 REG----------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 + + + L+ + + IV+GN +V+ AR DA F + D+ Sbjct: 292 KSDSFSKLDLSSEQIISTNFLLISNGLQESNNIIVKGNEKVLKARFSDAKFFVESDK--- 348 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 +R +L + + ++G +RV RI + +KI + Sbjct: 349 -----------------KVSSSERNEKLK--SISYLKEMGNVFQRVKRIEAISQKILNYL 389 Query: 405 D---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + D + A K DLC+EIV EFPELQG +G +Y + + C A+ EH P Sbjct: 390 NDQSLDSKKIIEAAKYCKNDLCSEIVYEFPELQGIMGGKYLRNEGFDKDICIAVAEHYLP 449 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 +++P+ K +S++DK++TLI+ + ++PSGS DPYALRR G+I II + ++ Sbjct: 450 CFYKDDLPSTKYGAIISISDKIETLISIFISGKRPSGSSDPYALRRNLNGVILIIWQFEL 509 Query: 522 DIPLSQFI--------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAIL- 560 D+ + +LI F + R+ +L + I DLI+A+ Sbjct: 510 DLAIENMFCELFQYWEISLPNLKFEKEKVLIDLIEFTNQRIVSHLEELSIDKDLIKAVCL 569 Query: 561 -----RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLE 613 R + N+L + + IK +N+ + R+ ++ K Sbjct: 570 IDSASRKKIMNILDLKNRIKTINKLKEKTNFSEIQKVISRVCKLAEKGSLKTNIFLHKDH 629 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ---VLV 670 I+P+ + E +++ I T I S+ + Y ++ L + + FD VL+ Sbjct: 630 INPKLFEKDCEIKVFEFIKQLETII--SLPNWDYFRLFKLFETNANSLNELFDNDKGVLI 687 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D E+R+NRL+LL ++N L + + KI Sbjct: 688 MAEDSEIRNNRLNLLGLVRNYSLKIADFTKI 718 >gi|332283303|ref|YP_004415214.1| glycyl-tRNA synthetase beta chain [Pusillimonas sp. T7-7] gi|330427256|gb|AEC18590.1| glycyl-tRNA synthetase beta chain [Pusillimonas sp. T7-7] Length = 717 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 193/728 (26%), Positives = 315/728 (43%), Gaps = 75/728 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEKI-EER 70 P + K + + +L ++ ++ + TP RL + L + +PE+ E+ Sbjct: 23 PPKALQKLGLAFAEGIRKVLDQQRLLADGCTVADFSTPRRLAVRLSAVLGQAPEQRYTEK 82 Query: 71 LGPRV------GAGKKAIDGFLRSTGLQ-TISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 L P A+ L S L+ + I + K D A L++ Sbjct: 83 LMPAKIGLTETNEITPALAKKLASKHLEHLTAADLIHESDGKQDYLYAQGVSSGALLDPA 142 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + AI +P PK MR+ +S+ ++RP ++ + E++ID+ + Sbjct: 143 LQEALDYAITHLPIPKVMRYQLADG-VSSVKFVRPAHQLVALW-----GEQVIDIQALGL 196 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILNDAHRLASAVG-- 240 G T GHRF + I++ + Y + L+E V+ RR I A A+G Sbjct: 197 KSGRKTLGHRFMSTQVIELTDPNTYEQQLLDEGKVIASFTDRRTLISEQLLEQAQALGAT 256 Query: 241 -LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE-GV 298 E LL+E+ LVE V++G F++++L +P E + LT++ NQK F + G Sbjct: 257 IGTGSEVDALLDEVTALVEHPTVYVGEFEQQFLGVPPECLILTMRLNQKYFPLFEPDTGK 316 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L + F++VSN+Q +D + I+QGN RVV RL DA F+ D Sbjct: 317 LTHRFLIVSNMQIAD-PSHIIQGNQRVVRPRLADAQFFFNTD------------------ 357 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 L PL R+ L V+H K+GTQ RV R+R L + IA+ + AD+ RA +L+ Sbjct: 358 --LKTPLADRVVSL--ASSVYHNKLGTQLNRVERVRKLARHIAEQLGADITHAGRASLLA 413 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA E AI + R P + V Sbjct: 414 KADLNSSMVGEFPELQGIMGAYYAAADGEADDVVLAIRNQYRIRLDTPIEPATLTAAIVF 473 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII----------LENKIDIPLSQF 528 +A++++TL+ W I P+G +DPY LRRA LG+I + + + L Sbjct: 474 MAERIETLLGIWGIGLAPTGERDPYGLRRAALGLISAFEQLQAGGYLNISDTTTLNLHDL 533 Query: 529 IEDQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + F ++R + L RH +I+A+L + L + Sbjct: 534 LHHAANTFELGVIAADTVAEVEAFIYERYRNLLSHDFNRH-VIDAVLALKPA-LHQVHAR 591 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 F + E + KRI +L KK + L AEK L +I+ Sbjct: 592 SAACAAFAQRPEAESLSAANKRIANLL----KKADAAPSSLDHSQLSDPAEKALADIIAK 647 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 QE + + + ++ FF+ V+V DD +R NRL+LL + + Sbjct: 648 LEPQAQEQFAQGNFSGSMATMAQAKDAVDAFFNDVMVMADDPAIRANRLALLNDLHRNMN 707 Query: 694 IVINVQKI 701 V ++ ++ Sbjct: 708 QVADISRL 715 >gi|194476741|ref|YP_002048920.1| putative Glycyl-tRNA synthetase, beta subunit [Paulinella chromatophora] gi|171191748|gb|ACB42710.1| putative Glycyl-tRNA synthetase, beta subunit [Paulinella chromatophora] Length = 718 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 180/753 (23%), Positives = 320/753 (42%), Gaps = 87/753 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI +EE+PA A L ++ L+ + Y+++R TP RL + + L Sbjct: 1 MSNFLLEIGTEELPAEFARLALPQLEYLICRDLQIHRINYEDLRVTSTPRRLIVQISNLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+ EER GP G A+ GF + G++ + + KG A + Sbjct: 61 SSQPDLEEERKGPPAFQAMMKGELGPAMLGFAKRCGVEISNLEI--RQTNKGSFVFAHVS 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++LK +P I + + MRW + RP++ ++ + E Sbjct: 119 QPGQKTIELLKQCIPTWIGGLQGRRFMRWGEQEQ-----KFSRPVRWLVALFDKEIINIT 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ E+ G IT GHR + +++ + Y + V++D R I + Sbjct: 174 -LENTSPEVKSGRITRGHR-LSTKQLQIGNASSYDAIMNRGQVIVDRIVRAALIAEAINL 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + ++L E++ LVE ++ G+ ++YL LP E++ ++ +Q+ + Sbjct: 232 ATLNIQARAGISEELFTELVDLVEQPKLIQGAIAERYLRLPPEVLSTVMRIHQRYIPLYS 291 Query: 295 RE-----------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 + L FIL+SN + I GN RV+ ARL DA F D Sbjct: 292 VDTEIDPLALNSSNALLPQFILISNGNF-EATETIRYGNERVLKARLADAEFFLDVD--- 347 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LS +R+ +L + + F +G+ ER R+ + + + + Sbjct: 348 -----------------LSTASVERLRKLAL--ITFAEGLGSLKERSDRLVWITQLLTKY 388 Query: 404 IDADV---ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 I + +A L+K DL +++V EFPELQG +G +Y + + E A+ EH Sbjct: 389 ILVEASIAKDACKAASLAKHDLASQMVFEFPELQGIMGGKYLLAEGEKREVALAVLEHYM 448 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR + +P+ + V+LA++L+ L++ +A E+PSGS DPYALRRA GI++I+ Sbjct: 449 PRCAGDVLPSTEAGSIVALAERLELLLSIFAKGERPSGSSDPYALRRAGNGILQILWHRN 508 Query: 521 IDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL 560 I +S+ ++ Q L R+ L + + DLI+A+ Sbjct: 509 WSIDISEILQKTSEHWSHLFPAFQVKPKQLTQELSDLLRQRIISQLSEEGVDIDLIQAVA 568 Query: 561 RPEND------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS--L 612 + + + +K+L + +R + K I Sbjct: 569 GETTSTAQLLIDPIDVRSRLKYLISLRKQNRLVPIQAMVQRAAHLADKAVLKPNVIDPKG 628 Query: 613 EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVL 669 + + +E L +I ++ Y Q+ D+L +E FFD V+ Sbjct: 629 AFNSKLFESPSEVALANLIESLYP----LAKNRLYSQLSDVLSQGVNILETFFDGEESVM 684 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 V D+ E+R+NRL+LL + N I+ + K++ Sbjct: 685 VMNDNLEIRNNRLNLLAILHNQANILADFSKLI 717 >gi|242091660|ref|XP_002436320.1| hypothetical protein SORBIDRAFT_10g000400 [Sorghum bicolor] gi|241914543|gb|EER87687.1| hypothetical protein SORBIDRAFT_10g000400 [Sorghum bicolor] Length = 1034 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 172/721 (23%), Positives = 311/721 (43%), Gaps = 112/721 (15%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F+LEI +EE+P +A E L L+ L++ + + + Y TP RL + ++ LS Sbjct: 396 FVLEIGTEELPPGDVVEATEQLEKSLVNTLEKRRLTHGKVHTYGTPRRLAIVVENLSMKQ 455 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E E GP V G KA +GF R + D ++ K + A +R+ Sbjct: 456 TEVEFELRGPPVAKAFDEEGNPTKAAEGFCRKNNVSV--DHLYRRIDGKTEYIYARVRES 513 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++VL +P + + +PK + W Sbjct: 514 ARFADEVLAEDIPTIVSGISFPK------------SMRW--------------------- 540 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 V++ + Y+R +E+A +L++ + R+ +L+ + LA Sbjct: 541 ----------------------NSNVETAESYLRSVEKAGILINMQERKEKVLHASTVLA 578 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 VG + V LL+E+I LVE +G +D +L LP++++ ++ +QK F ++ Sbjct: 579 EGVGGDFVAPDSLLQEVINLVEAPVPILGRYDDSFLELPKDVLITVMQKHQKYFAVISKS 638 Query: 297 -GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+N S+ + +GN V+ AR EDA F+K D Sbjct: 639 TGDLLPYFIAVANGAISE--EVVRKGNEAVLRARYEDANFFYKMDTQ------------- 683 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV---D 412 K + +L ++FH K+GT ++++R+ ++A ++ + ++ Sbjct: 684 -------KKFSEFRGQLS--GILFHEKLGTMLDKMTRLENTVAELALILGINERMISIIK 734 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A L+ +DL T IV EF L G + + YA+ +A+ E PR + P Sbjct: 735 DAAALAMSDLATSIVTEFTSLAGIMARHYALRDGIPEEIAEALFEITLPRSSGDVFPRTD 794 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------ 526 I +++AD+LD+L+ + +PS + DP+ LRR + G+++I++ENK L Sbjct: 795 AGIVLAVADRLDSLVGLFGAGCQPSSTNDPFGLRRVSYGLVQILVENKKSFDLRRALTLL 854 Query: 527 --------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + + F RL+ L D + +++ ++L + + Sbjct: 855 AGVQPIEIETNVIDEAVQFVTRRLEQLLVDEGVNCEIVRSVLMERANCPYLAAQTATEME 914 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + K + + R +I+ K E +LE+ P + EK L++ + I Sbjct: 915 AFSRTETFPKVVEAYSRPTRIIR---GKEIESALEVDPSVFEKDEEKVLWSAYLEVADKI 971 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +D K + LL P+E FF+ V V V+D VR+NRL+LL+ I+++ + ++ Sbjct: 972 HPGVDIKTFADASLLLIQ---PLEDFFNSVFVMVEDERVRNNRLALLRKIESLPKGIADL 1028 Query: 699 Q 699 Sbjct: 1029 S 1029 >gi|254418766|ref|ZP_05032490.1| glycyl-tRNA synthetase, beta subunit [Brevundimonas sp. BAL3] gi|196184943|gb|EDX79919.1| glycyl-tRNA synthetase, beta subunit [Brevundimonas sp. BAL3] Length = 790 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 237/622 (38%), Positives = 333/622 (53%), Gaps = 49/622 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLEI+SEEIPARMQ AA DL ++ LK G+ + + Y P RL L + GL Sbjct: 1 MPQLLLEIFSEEIPARMQQGAARDLERMVSDRLKAAGLTWDALTTYAGPRRLTLVIDGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +P++ EE GPR A ++A++GFLR TGL D ++D V AVL R Sbjct: 61 AATPDREEEVKGPRASAPEQALEGFLRKTGLT--RDQLTERDG----VLFAVLSSKGRAT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ V I+ PWPKSMRW + W+RP+K ILC+ K++ ++ Sbjct: 115 TDLVAETVDQVIRTFPWPKSMRWGSG-----TLRWVRPIKRILCLFDG-----KVVPFEI 164 Query: 181 KEIPCGNITYGHRFHAPHPI-KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 IP IT GHRF + KV Y LE+ VLLD R+ IL+ A +A Sbjct: 165 DGIPSDAITEGHRFLGSGQLLKVSDFVDYRTQLEQNFVLLDVADRKLRILDQAKAACAAK 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGV 298 GL LV+D LL+E+ GL EW +G D ++L LP E++RL++K +QK F R + Sbjct: 225 GLVLVDDDGLLDEVAGLAEWPTPILGDMDPQFLALPPEVVRLSMKVHQKYFAVRDPSKDG 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA F++V+N++A+DGG A+ GNSRV++ARL DA FW DQ Sbjct: 285 LAPNFLVVANVEATDGGKALAAGNSRVLSARLNDARFFWDEDQ----------------- 327 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 D A+L V FHAK+G+ +RV RI L ++IA L+ AD + A LS Sbjct: 328 ---KVGFDAWNAKLS--GVTFHAKLGSLADRVERIAALAREIAPLVGADPDEAETAARLS 382 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA L + + DA+ +H KP+GP + VPT +++ V+ Sbjct: 383 KADLLSGMVSEFPELQGVMGGYYARLAGNSDAVADAVRDHYKPQGPADTVPTAPVTVAVA 442 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF 538 LADKLDTL+ F+AI+EKP+GSKDP+ALRRA LG+IR++LEN + L L F Sbjct: 443 LADKLDTLVGFFAIDEKPTGSKDPFALRRAALGVIRLVLENGVRASLGAL-----LAAFV 497 Query: 539 HDRLKLYLHDRDIRH--DLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 + L+ + + DL E L + + ++ F E L++ R Sbjct: 498 NSVLRAHEMHKLSDWLVDLNETPSLDGLKRLASATARLGYVAGFAGLTNEEAALVA--RS 555 Query: 597 FQILAIEEKKNREISLEISPQY 618 I+A E K+ + Sbjct: 556 DSIVAQEYFKDAAWIDRLDTYL 577 Score = 188 bits (477), Expect = 3e-45, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 9/228 (3%) Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--DQNL 534 + D+LDT + + + + S D + T D+ L +++ +L Sbjct: 567 AAWIDRLDTYLVWRGLEDDLSRYPDDEFVESRTRD------WTGFDLELQAWVQGLVGDL 620 Query: 535 ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 + FF DRL + L D+ RHDL+ A+ +D+L+ IV ++ L F ++ G L K Sbjct: 621 VAFFADRLTVLLRDQGQRHDLVAAVFALGDDDLVRIVRRVEALAAFLATDDGANLLAGYK 680 Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEA-EKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 R IL EEKK + + E L + T ++ +++ + + Sbjct: 681 RASNILRAEEKKGPVPTGMVQTGLPNQPEPETVLAFAVGAARTAVEAALETEDFAAAMTA 740 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + P++ FF+ VLVN D RDNRL LL +++++ V + +I Sbjct: 741 LARLRAPVDRFFEDVLVNSDVPAERDNRLKLLGQVRDVMGQVADFGQI 788 >gi|163855083|ref|YP_001629381.1| glycyl-tRNA synthetase beta chain [Bordetella petrii DSM 12804] gi|163258811|emb|CAP41110.1| glycyl-tRNA synthetase beta chain [Bordetella petrii] Length = 712 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 191/728 (26%), Positives = 319/728 (43%), Gaps = 75/728 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKI-EER 70 P + K + + + L + G++ + TP RL + L + +P++ E+ Sbjct: 18 PPKALQKLGQAFAEGVRATLHKHGLLADGCQATAFATPRRLAVRLSQVREQAPDQDYAEK 77 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQI-KKDPKKGDVYLAVLRKPKRLIEDV 123 L P G A+ L + GL+ I+ + ++ K D +A P + D Sbjct: 78 LMPVKVGLDADGNATPALLKKLAAKGLEGIAPASLARESDGKQDYLVARGTAPGAKLADG 137 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + AI +P PK MR+ ++ ++RP ++ + A+ ++ + + Sbjct: 138 LQEGLLAAIDGLPIPKVMRYQLADG-VTTVKFVRPAHGLVALHGAD-----VVSVSALGL 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G T GHRF A P+ V D Y L E V+ E RR I + A+ +G Sbjct: 192 SAGRRTLGHRFMADAPVDVADADAYETVLAEQGRVVASFEARRAEIDSQLQAHAARLGAT 251 Query: 243 LVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGV 298 L D + LL+E+ LVE V++G FD+++L +P+E + LT++ NQK F G Sbjct: 252 LGTDPEVAALLDEVTALVEHPTVYVGQFDEQFLQVPQECLILTMRLNQKYFPLFDPASGK 311 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L + F++VSN+ D IV+GN RVV RL DA F+ D+ Sbjct: 312 LTHRFLIVSNMHTDD-PVNIVEGNQRVVRPRLADAQFFFDTDR----------------- 353 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 PL R+ +L +V+H K+GTQ ERV R+R + + +A L+ D A DRA +L+ Sbjct: 354 ---KTPLAARVQQLG--SIVYHNKLGTQLERVERVRAIARGVAGLLGGDAAAADRAALLA 408 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T +V EFPELQG +G YA E A+ E + R + + + Sbjct: 409 KADLGTNMVGEFPELQGIMGAYYAAGDGEPGDVVRALREQYRIRLDAPVTADSLTAAVLF 468 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN----------KIDIPLSQF 528 +A++ +TL+ W I P+G +DP+ LRRA LG+I + + L Sbjct: 469 IAERAETLVGIWGIGLAPTGERDPFGLRRAALGLISAFEQLAAGGLLAASANGPLSLDGL 528 Query: 529 IE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 +E + F ++R + L R + ++A++ L Sbjct: 529 LELAAGTFPAGKIATATVPEVRAFIYERYRNQLAAEFDR-NAVDAVIALAP-PLHQAAAR 586 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + F + + KRI +L E + L AE+ L A ++ Sbjct: 587 VRAVTAFGQLPEAASLAAANKRIGNLLKKAEGD----IGAVDASRLAEPAEQALAAAVAA 642 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + + L EP++ FF V+V DD VR NRL+LL + ++ Sbjct: 643 LRPQAEAQLQAGDFAGSLSTLAQAREPVDAFFADVMVMADDPAVRANRLALLAQLHGMMN 702 Query: 694 IVINVQKI 701 V ++ ++ Sbjct: 703 QVADISRL 710 >gi|126696157|ref|YP_001091043.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9301] gi|126543200|gb|ABO17442.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9301] Length = 720 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 179/751 (23%), Positives = 327/751 (43%), Gaps = 83/751 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA+ + E ++ L ++ + ++++ TP R+ L L+GL Sbjct: 1 MSKYLLEIGTEELPAKFSYSVLEQFKSLIEFELDKKLIKFEHIVVTSTPRRIVLLLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ +KI ER GP+ G A GF S + K+ +KGD Sbjct: 61 DYAEDKIIERKGPKANSAYLNGCPTNAALGFANSLDINVGELEI--KNTEKGDFVFGKKI 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + L +I+P ++ + + M+W + + RP++ I I E + Sbjct: 119 EKGLSTKISLSSIIPKLVKSLQGARFMKWGAGN-----MKFSRPIRWIASIYNDEILDFE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + D +I N T HR ++VQ+ D + L+ V+ + R+ I + ++ Sbjct: 174 FDECD-PKIKISNKTKSHR-LINEVLEVQNPDEFFELLKRNRVIAIRKERKEKIESLINQ 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + ++ LE + LL E+ LVEW + +G F ++L LP E++ +K +Q+ Sbjct: 232 ASKSLNLEPDLSEGLLNELTDLVEWPDLIIGKFSNEFLDLPVEVLSTVMKIHQRYVPLLL 291 Query: 295 REGVL----------ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 + + V + + I +GN +V+ AR DA F + D+ Sbjct: 292 KNESFSKLDLSSEKNISTTFCVISNGLEESNNNIAKGNEKVLRARFSDAKFFVESDKKVA 351 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 +R +L V + +G +RV RI + KKI + + Sbjct: 352 S--------------------IERNEKLK--SVSYLKGLGNIFQRVERIEEVTKKILKFL 389 Query: 405 D---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + + + A K DLC+EIV EFPELQG +G +Y + + C A+ EH P Sbjct: 390 NDKSLEEKKIIEAAKYCKNDLCSEIVFEFPELQGIMGAKYLKYEGFSEDVCLAVAEHYLP 449 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 + +P+ K VS+ADK++TLI+ + ++PSGS DPYALRR G+I+II + + Sbjct: 450 SFYKDALPSTKYGAIVSIADKVETLISIFISGKRPSGSSDPYALRRNLNGVIKIIWDYEF 509 Query: 522 DIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 D+PL + +L F R+ +L + + +LI A+ Sbjct: 510 DLPLDKLFNELIDFWKIAFPNLNFSREKVFNDLNEFLVQRIVSHLEEISLSKELIRAVCS 569 Query: 562 PE------NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE-- 613 + N++ + + IK + +F + R ++ + ++ Sbjct: 570 SDELSKKRVLNIVDLKNRIKSIMDFNEKENFVEIQKVITRASKLANNSDLSTDVLATRDY 629 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ---VLV 670 ++ + + E +++ I + E D+ Y ++ +L IE FD VL+ Sbjct: 630 VNTKLFEKDCELKVFEFIEELEKLFSE--DYCNYLELLNLFEINVNTIEDLFDNEKGVLI 687 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D ++R+NRL+LL I+N L + + + Sbjct: 688 MSEDLKIRNNRLNLLSLIRNYSLKIADFTLL 718 >gi|257458792|ref|ZP_05623915.1| glycyl-tRNA synthetase, beta subunit [Campylobacter gracilis RM3268] gi|257443780|gb|EEV18900.1| glycyl-tRNA synthetase, beta subunit [Campylobacter gracilis RM3268] Length = 675 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 176/717 (24%), Positives = 319/717 (44%), Gaps = 63/717 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA K +++ +L+ + + R ++P R L+ + Sbjct: 2 ELLIEIGVEELPAIPFLKERANIAPKWRAVLEANRIN-SDFRFEFSPRRFVLFHEDFPQR 60 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + G GA A F + G+ S+ + ++ K +V + Sbjct: 61 GDDAQIVSTGAPKSVALKDGAWSPAALSFAKKYGIS-ESELEFRQVGGK-EVLYHAEVQK 118 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++L ++ ++ + + ++MRW + F +IRP++SI C+L + + Sbjct: 119 GRDSREILGEMIEEFLRSLNFGRAMRWGSGE-----FEFIRPIRSIACVLGG-----QNV 168 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D ++ + + HR IK + Y LE V+L + R++ IL++ +L Sbjct: 169 DFEIYGVRSAAAFFPHRKFGYEAIKFKDAVDYFALLERNGVILSEQKRKDKILSEFAKLE 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G ++ D LL+E+ + E+ +GSF++ +L +P+E+I ++K NQ+ F + Sbjct: 229 KKHGFKIEVDPALLDEVTAITEYPTALLGSFERDFLSVPKEVIITSMKENQRYFPVFEGK 288 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L+N F++VSN D +V+GN +V+ ARL DA+ FWK D + L Sbjct: 289 -NLSNHFVVVSNAITDD-DELVVRGNEKVLRARLSDAMFFWKSDLQAEFSPEKL------ 340 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 ++++ + L V+ ++ + +I I V+ A Sbjct: 341 ----------KQISYMQALGSVYDKQVRELAVARALSADYATQIEAEIGKKDFAQDVENA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 ++ SKADL + +V EF ELQG +G YA C AI E P G +P+ S Sbjct: 391 VMFSKADLSSTMVGEFSELQGIMGSYYAAHAGLADHVCRAIREQYLPSGEDSELPSGVFS 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 +++A K +TL+ ++IN+ PSG+KDPYALRRA G+I+I+L + + Sbjct: 451 SVIAIAMKFETLLGLFSINKVPSGNKDPYALRRAATGLIKILLNQGLSFDANALAQKLAP 510 Query: 529 ----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + L+ F DRL + I +I+A + ++LL + IK L E ++A Sbjct: 511 NYKKFDISKLLDFIKDRLYGIFDE--INPSVIKACIASGENDLLLLSKAIKALGEIAAAA 568 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + + KR+ I+ E+ + AE+ L A ++ Sbjct: 569 DFGENFATFKRLANIIKDEK------IGAVDENLFEHGAERALNAAFRAIK------LNE 616 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + I+ FFD V++NV D ++R NR++ + I L ++++I Sbjct: 617 NDVSGYLRSLFGLKGVIDDFFDNVMINVQDVKIRTNRIANIGQIYRAFLQFADIKEI 673 >gi|154148492|ref|YP_001406797.1| glycyl-tRNA synthetase subunit beta [Campylobacter hominis ATCC BAA-381] gi|153804501|gb|ABS51508.1| glycyl-tRNA synthetase, beta subunit [Campylobacter hominis ATCC BAA-381] Length = 674 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 182/725 (25%), Positives = 338/725 (46%), Gaps = 80/725 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+PA K ++++ +L + + + +TP RL L K S Sbjct: 2 ELLIEIGTEELPAIPFLKEFKNIAPKWREILCKNSLETE-FEFEFTPRRLVLIHKNFSEF 60 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ + G G KA F + G+ ++ +V + Sbjct: 61 QPDSEIIKTGAPKNIALKDGVFTKAALSFAKKCGISENELKF--ENVDGKEVLYYKKLQK 118 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++L +++ + + + +SMRW FS+IRP++S+ C+L K + Sbjct: 119 GKASAEILGSMIEEFLLSLNFGRSMRWGNGE-----FSFIRPIRSVACLLDG-----KNV 168 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D + + + HR I+ + D Y + L + ++L + R+ IL++ ++ Sbjct: 169 DFKIFGVQSRAAFFPHRNFGYELIRFRDSDEYFKLLAKNGIILKSDDRKTEILSEFGKIE 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G+++ D +LL E+I + E +G+FD+ +L +P+E+I ++K NQ+ F Sbjct: 229 RENGVKIQIDNELLNEVIAITEHPTALLGNFDESFLAVPKEVIITSMKENQRYFPVF-EN 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L+N F++VSN + D G I++GN +V+ ARL DA+ FW+ D + + Sbjct: 288 GKLSNHFVVVSNAVSDDNG-LIIKGNEKVLRARLSDAMFFWQNDLKAEFSEN-------- 338 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI----------DA 406 + +V + +G+ E+ R K A+ D Sbjct: 339 ----------------KLKNVSYMDGLGSVYEKELRELETAKIFAEFYKDELKNEFKKDC 382 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 ++RAI+LSKADL + +V EFPELQG +G YA+ +NE+ AI E P G Sbjct: 383 FENEINRAIMLSKADLTSSMVGEFPELQGVMGSYYALYKNEHPLVARAIYEQYLPNGENS 442 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P S ++++ K +TLI ++I + P+G+KDPYALRRA LGI++I+L ++ ++ Sbjct: 443 ELPNGIFSSIIAISVKFETLIGLFSIGKIPNGNKDPYALRRAALGILKIVLNQNLNFNIA 502 Query: 527 QF----------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ +LI F DRL D +I+A + +++ + I Sbjct: 503 SVIKKLAKNYAKFDENSLINFLKDRLYSLY---DANVSVIKACINSGENDIKKLNSAIIS 559 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L+E A + + KR+ I+ E+ ++ E E L +V Sbjct: 560 LDEISKEADFSEKFATFKRLANIIKDEK------IGVVNEALFENETEILLNSVFKSLD- 612 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + + L ++ + I+ FFD+V++N +D++++ NR++L+ I N L V Sbjct: 613 -----LNDEDCKNYLNSLFALKDKIDEFFDKVMINAEDKKIKANRIALIGQIYNAFLKVA 667 Query: 697 NVQKI 701 ++++I Sbjct: 668 DIKEI 672 >gi|78779151|ref|YP_397263.1| glycyl-tRNA synthetase, beta subunit [Prochlorococcus marinus str. MIT 9312] gi|78712650|gb|ABB49827.1| glycyl-tRNA synthetase beta chain [Prochlorococcus marinus str. MIT 9312] Length = 720 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 182/753 (24%), Positives = 329/753 (43%), Gaps = 87/753 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA+ H E ++ L ++ + + N+ TP R+ L L+GL Sbjct: 1 MSKYLLEIGTEELPAKFSHSVLEQFKSLIEFELDKKLIKFNNIVVTSTPRRIVLLLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + +K R GP+ G+ A GF S G+ K+ +KG+ Sbjct: 61 DYGEDKTIVRKGPKANSAFLNGSPTNAALGFANSLGIDVDDLEI--KNTEKGEFVFGKKI 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + L +I+P ++ + + M+W + + RP++ I I + Sbjct: 119 EKGQSTRISLSSIIPKVVKSLQGTRFMKWGAGN-----IKFSRPIRWITSIYNDDILDFA 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + D I N + HR +VQ+ D++ L++ VL+ R+ I H+ Sbjct: 174 FNECD-PNIQISNKSKSHR-LINEVFEVQNPDNFFELLKQNRVLVKRHERQEQIETLIHQ 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + L+ K+LL E+ LVEW + +G F +++L LP E++ +K++Q+ Sbjct: 232 ASKLLNLKPDLSKELLNELTDLVEWPDLVIGKFSEEFLDLPVEVLSTVMKSHQRYVPLLL 291 Query: 295 REGVL------------ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 + N F++ + ++ S+ I +GN +V+ AR DA F + D+ Sbjct: 292 KNNTFSKLDLSSEKNISTNFFVISNGLEESNNN--IAKGNEKVLRARFSDAKFFVESDK- 348 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 +R +L V + +G +RV RI+ + KKI Sbjct: 349 -------------------KVSSIERNEKLK--SVSYLKGLGNIFQRVERIQEVTKKILT 387 Query: 403 LID---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 ++ + + A K DLC+EIV EFPELQG +G +Y + + C A+ EH Sbjct: 388 FLNDKSLEDKKIIEAARYCKNDLCSEIVFEFPELQGIMGGKYLKNEGFSEDVCLAVAEHY 447 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P + +P++K VS+ADK++TLI+ + ++PSGS DPYALRR G+I+II + Sbjct: 448 LPSFYKDALPSSKYGAIVSIADKVETLISIFISGKRPSGSSDPYALRRNLNGVIKIIWDY 507 Query: 520 KIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAI 559 ++D+PL ++ +L F R+ +L + + +LI+AI Sbjct: 508 ELDLPLDNLFKELFDFWKISFPNLDFSKDKVLNDLNEFLVQRIVSHLEEISLSKELIKAI 567 Query: 560 LRPE------NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE--IS 611 + N++ + + IK + F + R+ ++ Sbjct: 568 CSSDELYQKRILNIVDLKNRIKSIVNFKEKETFVEIQKVITRVSKLANSSNLSTDVFLTG 627 Query: 612 LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ---V 668 ++ + E E +++ I + Y ++ +L IE FD V Sbjct: 628 DYVNTKIFEKECELKVFEFIRELEKLFSTGY--CNYLKLLNLFEINKNTIEDLFDNEKGV 685 Query: 669 LVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 LV +D ++R+NRL+LL I+N L++ + + Sbjct: 686 LVMSEDIKIRNNRLNLLSLIRNYSLLIADFTLL 718 >gi|313884232|ref|ZP_07817998.1| glycine--tRNA ligase, beta subunit [Eremococcus coleocola ACS-139-V-Col8] gi|312620679|gb|EFR32102.1| glycine--tRNA ligase, beta subunit [Eremococcus coleocola ACS-139-V-Col8] Length = 685 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 185/728 (25%), Positives = 328/728 (45%), Gaps = 75/728 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 ++LLEI EEIPAR ++ L + L + + + +++Y TP RL + + GL+ Sbjct: 3 HNYLLEIGMEEIPARYLLSLSQQLKERMANFLNDNRLEFDAIQEYATPRRLAVLVTGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP + G KA GF G T +D D Sbjct: 63 KQADLSEQAKGPALKIAKDDQGQWTKAAQGFAHGQGGTTDD--LFVQDLNGEDYVFINKF 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + DVL V + + +P +M W ++IRP+ ++ +L E Sbjct: 121 QAGESSRDVLNG-VESVVSGMTFPVTMHWHDYQ-----INYIRPVHWLVSLLDQE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I D + N + GHRF + + D Y LE+ VL D R+ I Sbjct: 170 VIPFDFAGVTASNGSRGHRFLGHD-LVIAQADQYEASLEKEFVLADFHKRQAVIEAQIKE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A ++ D+DLLEE+ +VEW F G F++KYL +P+ ++ +K +Q+ F Sbjct: 229 IADQNHWQVPIDQDLLEEVTAIVEWPTAFYGDFEEKYLEIPDMVLITAMKDHQRYFYALD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G + ++ +V+GN +V+ ARLEDAL F+K D Sbjct: 289 QAGEKLQAIFISVRNGDANHLENVVRGNQKVLKARLEDALFFYKED-------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA----DVAL 410 L ++ +A+LD V H K+G+ ++ +R+ + +A ++ D+ Sbjct: 335 ------LKGSIETYVAKLD--HVNEHYKLGSLADKQARVGKILDLLAVKVNQIDKNDLET 386 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 A + K DL T +V EF ELQG++G YA ++ AI P +P Sbjct: 387 AKMAAKMYKFDLMTGMVGEFDELQGQMGAWYARQFGQSDQVAQAIASQYLPTTAGGQLPI 446 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 K +++ADKLD+L+ ++A++ P+GS DPYALRR +G++ I+ + + L + Sbjct: 447 TKAGALLAMADKLDSLVQYFAVDLIPTGSNDPYALRRQAMGVVEIMADQAWSLDLVDLFQ 506 Query: 531 D-------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 D NL F R++ L ++ D+IEA+L + N++ I++ L Sbjct: 507 DILAHFNLSDSELLNNLKEFMAARMEQQLAKLNLNFDIIEAVLAGDFLNVVHILEAGPVL 566 Query: 578 NEFFSSA--KGEKFLLSAKRIFQI-LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 F + + S R+ + L ++E K+ +++ E+E+ L+ + D Sbjct: 567 QAFKNQEPQAYRNLVESLSRVLNLGLTVKEAKDLDLN------LAQSESEQVLFDAVKDL 620 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + ++ D ++ PI FF+ +VN D +++DNR +L+ Y+ ++ Sbjct: 621 N------YEADSMAELLDEFKALVTPIGDFFENNMVNADQADIKDNRYALMAYLSRYVMQ 674 Query: 695 VINVQKIV 702 ++N QK++ Sbjct: 675 MMNPQKLI 682 >gi|206901223|ref|YP_002251032.1| glycyl-tRNA synthetase, beta subunit [Dictyoglomus thermophilum H-6-12] gi|238064848|sp|B5YES4|SYGB_DICT6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|206740326|gb|ACI19384.1| glycyl-tRNA synthetase, beta subunit [Dictyoglomus thermophilum H-6-12] Length = 689 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 186/730 (25%), Positives = 340/730 (46%), Gaps = 74/730 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FLLEI +EE+PA A + + K + + ++++ + TP RL +Y++ L Sbjct: 3 KNFLLEIGTEEMPAHFIDPAIRQMYDFSLEYFKNKKISLESVKIWATPRRLVVYIENLGE 62 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G + F+ G ++ KG K Sbjct: 63 KQEAQEEEIRGPAAHIGYKDGMWTEVAKRFVEQYGASLEDLHI--EETPKGKYIFLRKVK 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L + ++ + +PK M+W F + RP++ I+ + + Sbjct: 121 EGMNTLEILPDYITSLLKSIRFPKMMKWGDVD-----FYFGRPIRWIVALY-----GDTE 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I++++ + + RF PI+++ D Y+ + E +++D E R+N IL +++ Sbjct: 171 IEVEIAGVKSSRYSRPPRFLPQIPIEIRDADSYLNVMRENYIIVDQEERKNEILKQINKI 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ L + DLL+E+ LVE+ +G FDKKYL LPE ++ +T++ Q+ F R Sbjct: 231 ANENSFILDYEDDLLKEVNYLVEYPTALLGEFDKKYLALPEVVLIITMEKKQRYFPLRDA 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L N FI++ N + ++QGN +V+ ARL DA +++ D Sbjct: 291 DGNLTNKFIVIRNG-TDNYKDIVIQGNEKVLKARLSDAEYYYHEDT-------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VD 412 PL++ +L ++F ++GT ++V R+R+L ++IA ++ ++ Sbjct: 336 ------KHPLEKYTEKLS--GIIFQEQLGTIKDKVERVRILVREIANILGLSSEENKILE 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 R++ L KADL T +V E+PEL G +G+ YA + E + I E++ PR + +P+N Sbjct: 388 RSVNLYKADLGTLMVSEYPELHGIMGRIYAKISGEKDPIPEVIGEYIYPRTLDDRLPSNF 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG------------IIRIILENK 520 ++ + +AD++D+L ++A++ P+GS+DP LRR + G +R + Sbjct: 448 LASILGIADRIDSLTGYFALDLFPTGSEDPIGLRRISGGLLRLLLESSLKLNLRNLFVKS 507 Query: 521 IDI-------PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 +I PLSQ + F RL+ L DR D+++A++ D + + Sbjct: 508 FEIYNFGEKYPLSQIDKGMG---FIGQRLRNLLLDR-YSIDIVDAVMEVGYDEMWRLKRR 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + +++F EK + R+++IL + E+S L EK+LY Sbjct: 564 LDFISKFKEKESYEKLKKALNRLYRILPKDF-----TPKEVSENLLSSPFEKKLYEDYLK 618 Query: 634 FGTHIQESMDHKRYHQIGDL--LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 I + Y + L+ + IE FFD VLV + + R NRLSLL IK + Sbjct: 619 IKNEIFNDILEGNYEVLLSYDFLNEFSDDIEKFFDNVLVMSPNEDERINRLSLLSLIKLL 678 Query: 692 ILIVINVQKI 701 +++ ++ Sbjct: 679 FWEILDWSRL 688 >gi|33862851|ref|NP_894411.1| putative glycyl-tRNA synthetase, beta subunit [Prochlorococcus marinus str. MIT 9313] gi|33634767|emb|CAE20753.1| putative Glycyl-tRNA synthetase, beta subunit [Prochlorococcus marinus str. MIT 9313] Length = 721 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 181/752 (24%), Positives = 313/752 (41%), Gaps = 84/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L+EI +EE+PA A L ++ L+ + Y ++ TP RL + ++ L+ Sbjct: 1 MSTLLVEIGTEELPADFARLALPQLEQMVSRDLQGLRLSYGMLQCTSTPRRLVVLVENLA 60 Query: 61 PHSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + E R GP G +A GF + GL+ ++ KG A + Sbjct: 61 SATADLEEVRKGPPAGQAFKNGVPTQAAAGFAKRCGLKAEDLEI--RETPKGPFVFATVL 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L +P I + + MRW + RP++ ++ +L E Sbjct: 119 EHGRSAMELLTDQIPEWIGSLQGRRFMRWGEGER-----RFSRPIRWLVALLD-EQIIPV 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +D EI N++ GHR H + + S + Y++ L + V +D + R I + Sbjct: 173 CLDGSDPEICAANLSRGHRLH-DQAVIIPSAESYVQTLAKVGVEVDRQKRGTLIRHAIDT 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ + DL EE+ LVE + G+F K YL LP E++ ++ +Q+ Sbjct: 232 AAAGLEACPNCPDDLFEELTDLVEAPLLLEGTFAKSYLDLPAEVLSTVMRVHQRYVPLYR 291 Query: 295 -----------REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 + L F+ +SN A + +GN RV+ ARL DA F + D+ Sbjct: 292 LDAVNDPLALDAKSSLLPRFLCISNGLAK-ASDPVRRGNERVLKARLADAEFFVEADR-- 348 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 L R + V F +G+ +RV R+ L + +L Sbjct: 349 --------------------SLASIERRKKLAHVTFAEGLGSLLDRVERMEWLTDVLVEL 388 Query: 404 IDADVA---LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 +D V RA+ L K DL +++V EFPELQG +G +Y + + E A+ EH Sbjct: 389 LDLSAEISVQVRRAVHLCKHDLVSQMVGEFPELQGVMGAKYLLAEGEPREVALAVLEHYL 448 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PRG + +P ++ ++LAD+L+ L++ +A ++PSGS DPYALRRA G+++I+ Sbjct: 449 PRGAGDALPESESGAVLALADRLELLLSIYAKGDRPSGSSDPYALRRAGNGLLQILWSKG 508 Query: 521 IDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAI- 559 + L ++ L F R+ L + DL +A+ Sbjct: 509 WRLNLLALLQRATNHWSKLLPHLNVTPSALAAELGEFLRQRMLSLLEEAGTDIDLAQAVA 568 Query: 560 -----LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE- 613 + + + L + K R ++ + +S Sbjct: 569 GETVLIDRLLSDPADARLRVDLLVRMRRTGKLLAVQAVVTRAARLAEKGDLPATVLSAAE 628 Query: 614 -ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVL 669 + P +E + V++ I + +RY + D L + E + FFD V+ Sbjct: 629 VVDPGLFEKPSELEMLKVLNALEP-ITKDSSSERYRHLADGLIAGSEALAAFFDGDQSVM 687 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V +D VR NRL+LL ++N ++ + +I Sbjct: 688 VMSEDLAVRANRLNLLSLLRNQAGVLADFSQI 719 >gi|315638432|ref|ZP_07893609.1| glycyl-tRNA synthetase beta subunit [Campylobacter upsaliensis JV21] gi|315481423|gb|EFU72050.1| glycyl-tRNA synthetase beta subunit [Campylobacter upsaliensis JV21] Length = 662 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 189/718 (26%), Positives = 332/718 (46%), Gaps = 75/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ LLKE + Y+TP RL + Sbjct: 1 MKELLIEILTEELPAIPFLKELPNIKGKWEKLLKEYRLE-AEFDFYYTPRRLVFFHPHFK 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G +A F++ G+ C ++ K +V Sbjct: 60 TKQENSLVEFIGAPKNVAYKDGKLSQAGLSFIQKVGIDETQICF--REIKGKEVLYYQKE 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++L ++ ++ + + KSMRW F +IR +++I+C+L E Sbjct: 118 LEGKESSEILGEMIENFLKSLHFGKSMRWGAYQ-----FEFIRAIRNIVCVL-----GED 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + T+ HR + ++ Y LEE V+LDPE R+ I+ Sbjct: 168 LVKFQSYGVQSSKQTFVHRSVSYEAFAFKNAKEYFELLEENFVILDPEKRKEKIIESFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + L + +D +LLEE+I + E+ +GSF+ ++L +P E+I +++ NQ+ F T Sbjct: 228 IETKENLNIAQDDELLEEVIAITEYPNALLGSFESEFLEIPSEVIITSMRENQRYFATFD 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D I+ GN RV+ ARL DA+ F+K D Sbjct: 288 EKG-LSNHFIVVSNAVCKDYSK-IIHGNERVLRARLSDAMFFYKND-------------- 331 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD-R 413 L + + + +++ +GT ++V R + L + + +D D + Sbjct: 332 ----------LQKGLEPEKLSKMLYLDSLGTVMDKVEREKALALLLCKFLDNDKQEAILQ 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ SKADL T++V EFP LQG +G YA + AI+E P +P+++ Sbjct: 382 ALHFSKADLATQMVYEFPNLQGIMGSYYAEKMGLSYEISLAIKEQYLPNQS--ALPSSEF 439 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----- 528 S V+LA K DTL++ ++I + PSG+KDPYALRRA GI++I+L L+ F Sbjct: 440 SSIVALAYKFDTLLSLFSIGKIPSGTKDPYALRRAANGILKILLHLGKKFDLNAFLKEAS 499 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + +L F +R+ + I+A+L +N +L+ I +K L E Sbjct: 500 KTYKSFDLNSLYDFILERIYPFYE---ANPSFIKAVLSTKNSDLIHIDSAVKALIELSKK 556 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I E I+ EAEK+LY + S+ Sbjct: 557 TNFNENFSTFKRLANIATKNE-------NLINESLFENEAEKKLYLAFKE-------SLK 602 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + Q + L ++ I+ FF+ V++N ++ ++++NR +L+ I N L + +++++ Sbjct: 603 VQNLKQKLESLFALKPFIDEFFENVMINSENEKLKNNRQALIFAIYNEFLKIADIKEL 660 >gi|311087596|gb|ADP67675.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 682 Score = 469 bits (1206), Expect = e-129, Method: Composition-based stats. Identities = 208/702 (29%), Positives = 340/702 (48%), Gaps = 62/702 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 6 LLIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDIDITE 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ GP + G +A +L+ G+ ++K + KG+ RK Sbjct: 66 RFVEIKKRGPSIINSYDKDGFLTEAATRWLKHCGININQAIRLKNE--KGEWLFYKTRKK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + IE ++ I A++ + KSMRW + + RP+++I+ +L +K+I Sbjct: 124 QENIESLIPKITESALKNISIKKSMRWGQDNQ-----KFSRPIRNIVILL-----DKKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILNDAHRL 235 D+ I N+ H IK++ Y LE+ ++ D R+ I+ D + Sbjct: 174 PGDVFNITSKNLLQNHLSSKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIEDIENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 234 AKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFPIYNS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 294 EKKLLPYFIFISNIQTQES-EKIIIGNQRVMHARLSDAEFFFKNDR-------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L + V+F +G+ E+ RI++L K IA+ +DV RA Sbjct: 339 ------KVKLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSDVEDSIRAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P I Sbjct: 391 LLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCTPIGC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 451 GLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKKSLSL 510 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I FF RL + + +I+++L ++ L+ I I+ ++ Sbjct: 511 YNKKNEEDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQAISF 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F + + Sbjct: 571 FKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFDNYTK 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 K+Y+ I + S PI FF +V + D ++R NR Sbjct: 628 NLFLEKKYNDILIKIKSFENPIYNFFKKVKIYHSDSKIRLNR 669 >gi|224418133|ref|ZP_03656139.1| glycyl-tRNA synthetase subunit beta [Helicobacter canadensis MIT 98-5491] gi|253827460|ref|ZP_04870345.1| Glycine--tRNA ligase [Helicobacter canadensis MIT 98-5491] gi|313141668|ref|ZP_07803861.1| glycyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253510866|gb|EES89525.1| Glycine--tRNA ligase [Helicobacter canadensis MIT 98-5491] gi|313130699|gb|EFR48316.1| glycyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 680 Score = 468 bits (1205), Expect = e-129, Method: Composition-based stats. Identities = 199/724 (27%), Positives = 328/724 (45%), Gaps = 74/724 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FLLEI ++E+PA ++ +L++ ++ + ++TP RL L K Sbjct: 4 TFLLEIGTQELPAIPLLTELPNIKPKFAKILEKYRLLC-DFDFFYTPRRLVLIAKQFPIT 62 Query: 63 SPEKIEERLGPRVG------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E GP + +A GF + G+ + KD K ++ P Sbjct: 63 QKSQTLEFFGPPLNIAYKDNEPTQAALGFFKKCGITQQEVTTLIKDDK--EILYFKKESP 120 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +D+L+ I ++ + + KSMRW S+IRP+ ILC+L + +I Sbjct: 121 QTPAQDLLQIITQEFLESLNFGKSMRWGNHKE-----SFIRPISWILCLL-----NDTLI 170 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 L L I + T+ HR + +V SLD+Y + L+ ++L + RR IL + + Sbjct: 171 PLHLYGINSKSQTFVHRNISFDAKEVTSLDNYFQVLQGGKIILKQDQRREKILQEIQAIQ 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + G+++ D++LLEEI+ + E+ G F + +L LP I ++K NQ+ F T + Sbjct: 231 TQKGIKVEIDEELLEEIVSITEYPTALFGEFSEHFLELPPPCIITSMKINQRYFATY-KN 289 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L N F++VSN + + I++GN +V+ ARLEDAL F+ D N N Sbjct: 290 EKLHNGFVMVSNSLS-EKNQIIIEGNVKVLKARLEDALFFYHNDLKNGLNPE-------- 340 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---------IDAD 407 + +V F +GT ++ R R + K +A L Sbjct: 341 ----------------KLKEVTFVEGLGTMWDKTQRERQIIKILAPLYQKYFNSQDFGLT 384 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + ++D+A LSKADL +E+V EF +LQG +G YA + AI+E P Sbjct: 385 LEILDQASNLSKADLMSEMVYEFTDLQGIMGYYYANALGYESNVALAIKEQYLPNSEESP 444 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P+N IS V+LA KLD L +++ + PSGS+DP+ALRRA +G+I+IIL + L + Sbjct: 445 LPSNLISAFVALAYKLDNLFGLFSVKKIPSGSRDPFALRRAAIGMIKIILHFDLPFDLKK 504 Query: 528 F----------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + Q L F +RL L L+ A+L +LL I + L Sbjct: 505 IFSLIAPLYRPFDLQQLENFILERLDSMLS---FNASLLRAVLATGERDLLQIYQKLSVL 561 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + + + KR+ I + N L I LL E LY + Sbjct: 562 DSILKNQDKALLTQTFKRVANITK---EINLNSDLPIKADKLLASEEIELYKAFCAYEEK 618 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 Y + + L ++ + FFD+VLVN D + ++NR +L+ I L + + Sbjct: 619 SLTL----NYQEQLENLLALNPLLSRFFDKVLVNAPDEDFKNNRKNLIARIYKAFLKIAD 674 Query: 698 VQKI 701 +++I Sbjct: 675 IKEI 678 >gi|300214614|gb|ADJ79030.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Lactobacillus salivarius CECT 5713] Length = 636 Score = 468 bits (1205), Expect = e-129, Method: Composition-based stats. Identities = 188/667 (28%), Positives = 297/667 (44%), Gaps = 71/667 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M FLLEI EEIPA + + L LKE+ + + + Y TP RL + + GL Sbjct: 1 MAHTFLLEIGLEEIPAHVVTPSVNQLVQKTTKFLKEQRIDFDEVIPYSTPRRLTVKVTGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF+R G+ K+ K + Sbjct: 61 ADKQADIEEEAKGPSKKIALDDEGNWSKAAQGFVRGQGVTVDD--IFFKELKGTEYVYVK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + + +VL + + +P MRW + F ++RP+K ++ +L Sbjct: 119 KFIPGKPVAEVLTGM-KDVAMDLKFPTMMRWGSND-----FEYVRPIKWLVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++ ++ +I G T GHRF + V S D Y+ LE V+ D R+ I Sbjct: 168 NEVVPFEILDIKTGRTTQGHRFLG-EAVDVPSADKYLETLETQKVIADAGVRKAEIRKQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ +V D+DLLEE+ LVE+ VF G F ++YL +P E++ ++K +Q+ F Sbjct: 227 DALATEKNWNIVVDEDLLEEVNNLVEYPTVFAGKFKEEYLQVPNEVLITSMKDHQRFFYV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L F+ V N D ++ GN +V+ ARLEDA F++ DQ Sbjct: 287 TDKEGNLLPNFVSVRNG-NKDYLENVIAGNEKVLTARLEDAKFFYEEDQQ---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 + + RL V+FH KIGT E++ R+ +L K + + ++ Sbjct: 336 ----------HTIADYVERLK--KVMFHDKIGTIYEKMERVNLLAKFLGNKLGLSETELK 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA ++ K DL T +V EF ELQG +G+ YA LQ E+ + AI E P +P Sbjct: 384 DLDRASMIYKFDLVTGMVGEFSELQGIMGEIYARLQGEDDNVSTAIREEYMPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +S+ADKLD++ +F+A N PSGS DPYALRR LGIIRI L+ DI L Sbjct: 444 QSNVGAVLSIADKLDSIQSFFAANMIPSGSNDPYALRRQALGIIRIALDKGWDISLPVLH 503 Query: 530 EDQNLIL---------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 N F DRL L R D+++A++ + + Sbjct: 504 AAINYAYAEREDLYKNTQPIANISETDTFVIDRLAQVLSGNKFRRDILDAVVTGADMPFI 563 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + L++ ++ + + R+ ++ + + EK L Sbjct: 564 QALQAAQVLSKHAEDNDFKEVIEALTRVTRLAKKAPXFXXDAXX--DSTLFENDTEKXLA 621 Query: 629 AVISDFG 635 + Sbjct: 622 DXFAKXE 628 >gi|145343082|ref|XP_001416295.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576520|gb|ABO94588.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1051 Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats. Identities = 171/730 (23%), Positives = 298/730 (40%), Gaps = 76/730 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D ++E+ +EE+P + + + LLK EG+ + + TP R L +K LS Sbjct: 364 ADCVIELGTEELPPQDVTSTSRQFHEAVDALLKAEGLTHAGISVGATPRRFTLSIKALSA 423 Query: 62 HSPEKIEERLGPRVG--------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 E GP + KA GF + G+ + K G+ AV+ Sbjct: 424 GQANVEERVRGPPLSRAFEEDGTTPSKAAQGFCKKNGVDAGAL------EKDGEYVWAVV 477 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K R VL+ +P I + +P++MRW + S ++ RPL+ + + + Sbjct: 478 KKEGRSAVAVLEEALPKIIAAINFPRAMRW----TTNSEAAFSRPLRWLFGV-----HGD 528 Query: 174 KIIDLDLKEIPCGNITYGHRFHAP--HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + + + G T R + Y L + ++L E R ++I ++ Sbjct: 529 HHLTFEALGVHSGTTTRLLRTRGDVTDTYSAANAAEYHALLAKDSIVLSFEDRMSSIWSE 588 Query: 232 AHRLASAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A A VG E+ + + LLEE+ LVE + MG F++ +L LP+E++ + ++ +Q+ Sbjct: 589 AKAAAKTVGGEIPDSAGEGLLEEVANLVEAPNLVMGDFEEAFLTLPKEVLVMVMRKHQRY 648 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +G L FI +N + GN V+ AR EDA F++ D Sbjct: 649 FPVEGADGALKPHFITFANGSCD--KGVVKHGNEAVLRARYEDAKFFYETD--------- 697 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L+KPL + L + F ++G E+ R+ L +A + Sbjct: 698 -----------LNKPLAEFKPELS--GITFQQELGNMLEKTQRVEGLVADVAAALGYGPD 744 Query: 410 L---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + A L++ADL T +V E L G +G+ YA + + +AI E PR + Sbjct: 745 VVAPATVAAGLARADLATAMVMELTALAGTMGRHYAQKEGLPANVSEAIFEACLPRSAGD 804 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+ ITV++AD+LDTLI +A+ P S DP+ LRRA G+++ I+ + L Sbjct: 805 ALPSTPAGITVAVADRLDTLIGLFAVVGGPKASADPFGLRRAAYGLVQTIVNSGATCDLR 864 Query: 527 QFIE--------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 IE + + F RL+ D + + A+L+ + Sbjct: 865 SLIELAAAKQPVEVSNERIEECVTFITRRLEQLFIDAGNDVECVRAVLKERGGSPALASA 924 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRLYAVI 631 I L G+ + + + + K L I+ E E+ L+A Sbjct: 925 SISELVAV----DGKALETCVRVLSRPTRLVRGKMGANADLRINEASFECEEERALHAAY 980 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 I + + + FFD V V DD E++ NR++L + ++ Sbjct: 981 VAARAKIVDGCSVTDMISAVCEMDNAA---TAFFDNVFVMADDAELKRNRMALCAAVASL 1037 Query: 692 ILIVINVQKI 701 V++ ++ Sbjct: 1038 PSGVLDFAEL 1047 >gi|150020527|ref|YP_001305881.1| glycine--tRNA ligase [Thermosipho melanesiensis BI429] gi|149793048|gb|ABR30496.1| Glycine--tRNA ligase [Thermosipho melanesiensis BI429] Length = 661 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 185/718 (25%), Positives = 322/718 (44%), Gaps = 81/718 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 ++ EI EE+P + L L KEE + Y + ++ P R ++K + Sbjct: 2 YIFEIGVEELPTTEVNNILLQLEEKLEKFFKEEELRYSGLTVFYAPRRFGFFIKKIDEKQ 61 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 +K E+ GP G KA++GFL+S I D +I+ + + Sbjct: 62 KDKTIEKRGPSKTVAFDENGNPTKALNGFLKSNNAS-IKDIEIRNN-----YVFLSKKVE 115 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E++LK +P I + + KSM+W FS++R IL + E I+ Sbjct: 116 GKKTEELLKEKIPQIIYSLNFRKSMKWGNGE-----FSFVRIPHWILSVYKGE-----IL 165 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 +++L I N TYGHRF + ++V+S++ Y+ +L V+ R+ +L+ Sbjct: 166 EIELFGIKASNKTYGHRFVDDNIVEVKSIEDYLENLRRLKVIALHGERKEKVLSLL---- 221 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 E D+ L++E++ L E+ + G F +KYL LPEELI TIK +Q+ F E Sbjct: 222 --KNYETSFDEGLIDEVVTLTEYPILLEGRFLEKYLSLPEELITTTIKHHQRSFTVYKGE 279 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 + N F+ + + I +G +VV ARLEDA +++++D Sbjct: 280 -KITNKFLSFIDS-PNGNVDLIKKGYEKVVNARLEDAKYYYEKD---------------- 321 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR--- 413 L PL+ L ++VF +GT ++V RI + +KI + + D + R Sbjct: 322 ----LKVPLESFNESLK--EIVFQKSLGTLMDKVERIEKISEKICEELKIDYSDKKRVLR 375 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L KAD+ + +V EFPELQG +G+ YA+ E+ + IEEH +VP N Sbjct: 376 TAHLCKADIASSVVYEFPELQGVMGRIYALKDGEDYNVALGIEEHY------SDVPKNIT 429 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 V++AD++DT++ + + PSGSKDP+ +R+ + I DI L + ++ Sbjct: 430 GAIVAIADRVDTVVGNFIVGNIPSGSKDPFGIRKKVDTLFEIPNVFSWDIDLLEVVKFSA 489 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L FF R +++ + R+D+ A+ + L + + L Sbjct: 490 ELFGKGIPNELFEFFEARYEVFNS--NTRYDIARAV-KRFWKRPLRGRLIAQALMNIVDK 546 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + L+ +R+ I + + S E L AEK L+ + I E++D Sbjct: 547 EEFQSLLIGFERVHNISSKFD------SCEFDSTKFLDNAEKELFNKYIELKPRILEALD 600 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L + I+ +FD V V ++R NRL L+ + + L + ++ + Sbjct: 601 NLSFDAALLYLVEFRKYIDSYFDNVFVMTKQDDIRMNRLGFLKSLDRLFLKLGDLNLL 658 >gi|317402364|gb|EFV82937.1| glycyl-tRNA synthetase subunit beta [Achromobacter xylosoxidans C54] Length = 712 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 188/728 (25%), Positives = 324/728 (44%), Gaps = 75/728 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKI-EER 70 P + K + + + L G++ + Y TP RL + L + +P++ E+ Sbjct: 18 PPKALQKLGQAFAEGVRATLARHGLLADGCAVEPYATPRRLAVRLSAVLAQAPDQAYAEK 77 Query: 71 LGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 L P G A+ L + GL+ I ++++ K D +A P + Sbjct: 78 LMPVKIGLTEDGKATPALQKKLAAKGLENIDLATLERESDGKQDYLVARGTAPGAALAVG 137 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + AI +P PK MR+ + ++RP ++ + A+ ++ + + Sbjct: 138 LQEGIDAAIDGLPIPKVMRYQLADGE-TTVKFVRPAHGLIALFGAD-----VVPVTALGL 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 G T GHR+ + I + D Y L E V+ E RR+ I A + Sbjct: 192 TAGRETLGHRYMSSGAIAIADADAYAATLAEKGRVVASFEGRRDEIQRQLLDHAGRLSAT 251 Query: 243 LVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGV 298 L +D + LL+E+ LVE V++G F++++L +P+E + LT++ NQK F G Sbjct: 252 LGDDPEVAALLDEVTALVEHPTVYVGEFEEQFLQVPQECLILTMRLNQKYFPLFDPASGR 311 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L + F++VSN++ D IV+GN RVV RL DA F++ D+ Sbjct: 312 LTHRFLIVSNMRT-DNPVNIVEGNQRVVRPRLADAQFFFETDR----------------- 353 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 PL R+ +L +V+H K+GTQ ERV R+R + + +A + DVA DRA +L+ Sbjct: 354 ---KTPLAARVEQLG--SIVYHNKLGTQLERVERVRSIARDVAGKLGGDVAAADRAALLA 408 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA E S A+ + R + + T+ Sbjct: 409 KADLGSNMVGEFPELQGIMGAYYAAGDGEPDSVVQALRTQYRNRYDTPVSQDDLTAATLF 468 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII----------LENKIDIPLSQF 528 +A++ +TL+ WAI P+G +DP+ LRRA LG+I L + L Sbjct: 469 IAERAETLVGIWAIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKLNQDGPLSLDGL 528 Query: 529 IEDQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + F ++R + L + R + +EA++ L + + Sbjct: 529 LAATAATFPAGKIPADTLAEVRAFIYERYRNQLINEHDR-NAVEAVIALAP-PLHQVGER 586 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + F + + KRI +L E + ++ L+ AEK L A I+ Sbjct: 587 VRAASAFAQMPEAASLAAANKRIGNLLKKAEGE----IGAVNDAALVEPAEKALAAAIAA 642 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + + L EP++ FF ++V +D VR NRL+LL + ++ Sbjct: 643 LRPQAEAQLAAGDFAANLRTLAQAREPVDAFFADIMVMAEDPAVRANRLALLGQLHTLMN 702 Query: 694 IVINVQKI 701 V ++ ++ Sbjct: 703 QVADISRL 710 >gi|33861316|ref|NP_892877.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33633893|emb|CAE19218.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 720 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 181/749 (24%), Positives = 327/749 (43%), Gaps = 83/749 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+P++ H ++ ++ ++ + + N+ TP R+ L+L+GL Sbjct: 1 MSKYLLEIGTEELPSKFSHSVINQINSLIEFEFDKKIIKFNNIICTSTPRRIVLFLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 H+ +K R GP+ G A GF S G+ ++ +KG+ Sbjct: 61 DHADDKTVIRKGPKANSAFLNGIPTNAAIGFANSLGITIDDLEI--RETEKGEFVFGTKI 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + L +I+P I+ + P+ M+W +F + RP++ I+ + E + Sbjct: 119 EKGESTRSSLSSIIPKVIKNLQGPRFMKWG-----GGSFKFSRPIRWIVSLYNDEILDFE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + D +I GN + HR I++ S D+Y + + V + E R+ I+N ++ Sbjct: 174 FNECD-PKISIGNTSKSHR-LINKVIEIHSPDNYFELMAKNGVFVKREERKKEIVNLINQ 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + V LE +LL E+ LVE + +FDK++L LP E++ +K +Q+ Sbjct: 232 ESQLVNLEPDLSDNLLNELTDLVESANLLTSNFDKQFLNLPVEVLSTVMKNHQRYIPLLK 291 Query: 295 REG----------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 + + + V + + I +GN +V+ AR DA F + D+ Sbjct: 292 KNKTFSKLDLSSEKVISTNFFVLSNGLRESNNIISKGNEKVLRARFSDAKFFVESDKKVS 351 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 +R +L V + +G +RV RI +KI + Sbjct: 352 SK--------------------ERNEKLKT--VSYLKGMGNVFQRVKRIEATSEKILNYL 389 Query: 405 D---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + D + A K DLC+EIV EFPELQG + +Y + + C A+ EH P Sbjct: 390 NDQSLDTEKIKEAAKYCKNDLCSEIVYEFPELQGIMAGKYLRNEGFSKEICMAVAEHYLP 449 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 +++P+ K +S++DK++TLI+ + ++PSGS DPYALRR G+I II + + Sbjct: 450 GFYKDDLPSTKYGAIISISDKIETLISIFISGKRPSGSSDPYALRRNLNGVILIIWQFEF 509 Query: 522 DIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL- 560 D+ L E+ +LI F + R+ +L + I DLI+A Sbjct: 510 DLDLENIFEELLEYWKISLSNLKFVKEKVLNDLIEFTNQRIVSHLDELSISKDLIKATCF 569 Query: 561 -----RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE-- 613 + N+L + + I +N + + R+ ++ K S + Sbjct: 570 IDLSAERKIMNILDLKNRINTINNLKGTPNFSEIQKVISRVSKLAESGNLKTTIFSHKYY 629 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ---VLV 670 ++P + E +++ I + I+ + + Y Q+ L + FD VL+ Sbjct: 630 VNPDLFEKQCENKVFEFIKELEEIIK--LSNWDYFQLFKLFEDNSNNLNELFDNEKGVLI 687 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ E+R+NRL+LL ++N L + + Sbjct: 688 MTENLEIRNNRLNLLGLVRNYSLKIADFT 716 >gi|291276980|ref|YP_003516752.1| glycyl-tRNA synthetase subunit beta [Helicobacter mustelae 12198] gi|290964174|emb|CBG40019.1| glycyl-tRNA synthetase beta chain [Helicobacter mustelae 12198] Length = 688 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 192/731 (26%), Positives = 338/731 (46%), Gaps = 80/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + +EI+ EE+PA + ++ + L+ + + ++TP R+ L+ + Sbjct: 3 SELFIEIFVEELPALPFLREFKNFATKWQEALQRHSIPPIQTQFFYTPRRIVLFCEQFPI 62 Query: 62 HSPEKIEERLGPRVGAG----------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + E+ +E GP V A + FL+ LQ C +K +V + Sbjct: 63 RTQEEKKEIFGPPVDVAFEKGDKNAPLTAAGEAFLKKNHLQIEQLCYAQK--GGKEVLFS 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + ++L I+ +Q + + K MRW +IRP+++I+ L Sbjct: 121 LQVQEGVSLTEILPQILKSFLQSLHFGKHMRWGNVTED-----FIRPIRNIMIFL----- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+ + I T HR +V++ Y + L E V+LD E RR IL+ Sbjct: 171 GEEFVPFVGYGIEARPQTKLHRDFGLDWQEVKNFADYCKKLNEGGVILDQEERREKILSS 230 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L + + + D +LL+E++ + E+ QV +G F++++L LP+E+I ++K NQ+ F Sbjct: 231 IISLEKSQNIAVEVDGELLDEVVAITEYPQVILGHFEERFLELPKEVIITSMKENQRYFA 290 Query: 292 TRTREG--VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 + L N F++VSN + D G IV GN +V+ ARLEDA+ F+ D + + Sbjct: 291 VYQDKSLQHLKNHFVMVSNSTSKDEG-IIVLGNQKVLRARLEDAMFFYHNDCKKGLSNAG 349 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 + +L +F G+ ++V R + + + + Q D Sbjct: 350 -------------------LEKL-----LFIEGAGSMQDKVKREQKIAEFLIQRFDCQEL 385 Query: 410 LVDRA-----IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 +A I LSKADL +E+V EF LQG +G YA++ ++ S I+E P G Sbjct: 386 SAKKAQILECIELSKADLLSEMVYEFSNLQGVMGYYYALVIKKDPSIALGIKEQYLPLGE 445 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 +P+ S V+LA K D ++ +++ + P+GSKDP+ALRRA GI+RIIL+ D Sbjct: 446 HSALPSTPFSAIVALAHKFDNILTLFSVGKIPTGSKDPFALRRAANGILRIILQESFDFD 505 Query: 525 LSQ------------FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 L Q + Q + FF +R+ L L++++L +N+ I D Sbjct: 506 LEQDLAKMLRILDLDLSQTQKIATFFIERMDGLLQ---QNRALLKSVLATNEENICRIFD 562 Query: 573 LIKHLNEFFSSA--KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 L E F+ + + + + KR+ IL K++ EIS + L+ EAE+ LY Sbjct: 563 KAHALGEIFTGDGIEQGELVATFKRVANIL-----KSKIPLGEISQELLIEEAEQTLYHD 617 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + Y L + ++ FFD+V+VNV++ ++ NR+ L+ +I Sbjct: 618 FLQVCAK----NESGDYLIRLKNLCGLKGSLDDFFDKVMVNVENPALKQNRIQLIAHIYE 673 Query: 691 IILIVINVQKI 701 L + ++++I Sbjct: 674 EFLQIADIKEI 684 >gi|284033696|ref|YP_003383627.1| glycyl-tRNA synthetase subunit beta [Kribbella flavida DSM 17836] gi|283812989|gb|ADB34828.1| glycyl-tRNA synthetase, beta subunit [Kribbella flavida DSM 17836] Length = 996 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 168/729 (23%), Positives = 301/729 (41%), Gaps = 80/729 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI +EE+P K A+ + L L + + + Y TP R+ ++ + Sbjct: 311 LLFEIGTEEMPPSEVTKTADAVRTALTEKLAATRLGHGTVTTYATPRRVVAFVTEVQAVE 370 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ GPR G KA GF R G+ T + D + P Sbjct: 371 PDAERVVRGPRKSAAFDAEGNVTKAAAGFARGQGVGTDQLHDL--DVDGVEYVAVTKPDP 428 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +VL ++ + + K+MRW+ S+ RP++ ++ +L ++++ Sbjct: 429 GRGAAEVLSGVLSEIVSGLRSDKNMRWNDAK-----LSFTRPVRWLVALL-----GDQVV 478 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + G T HR A +++ + + Y+ L + DP RR I+ A LA Sbjct: 479 PVAASTLAAGRTTRVHRTAAQPTVEIAAAEGYLDLLRIHGIEADPARRREQIVTAAQELA 538 Query: 237 SAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A G + + L+++I+ LVE +GSF YL LP E++ ++ +Q+ R Sbjct: 539 KAAGGSVDVEGESALIDQIVNLVEEPTAILGSFSADYLDLPAEILTTVMRKHQRYLPVRD 598 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L F+ V+N + + GN V+ AR EDA FW+ D P Sbjct: 599 ADGTLLPHFVAVANGSVDE--DTVRTGNEGVLRARYEDAAFFWRADLQTTPETM------ 650 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + ++ + F ++G+ +R RI + + +A + D+ + Sbjct: 651 ----------------KGELDKLAFEQRLGSMAQRAGRIGRIAESLAGTVGLAGDDLTTL 694 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L+K DL +++V E L G + +EYA E + A+ + PR + VP+ Sbjct: 695 RRAAELAKFDLGSQMVVELTSLAGTMAREYARRAGETEAVAQALYDMELPRSAGDPVPST 754 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK------IDIPL 525 ++LAD+ D L +AI KP+GS DP+ALRRA G++ I+ E+ + + L Sbjct: 755 TPGALLALADRFDLLAGLFAIGAKPTGSSDPFALRRAAAGVVAILREHPELRAITLPVGL 814 Query: 526 SQFIED-------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + + + F R + L DR H + A+L T + Sbjct: 815 AAAADQIGAQGIEVPAESLAEVSEFSVRRYEQQLIDRGDDHHQVAAVLPLAEA-PATADE 873 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L + + + +R+ +I+ + + P L AE L+ + Sbjct: 874 TLAELRRQVETEGFAELVAVLQRVRRIVPA------DTDPQYDPSKLTEPAEVVLHEAVQ 927 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + EP+ FF+++LV +D +VR RL LL I+++ Sbjct: 928 KVSPAPTTL------AEFVPAAAVLVEPVTTFFEEILVMAEDSDVRAARLGLLATIRDLA 981 Query: 693 LIVINVQKI 701 +++ Q + Sbjct: 982 APILDWQAL 990 >gi|288818943|ref|YP_003433291.1| glycine-tRNA ligase beta subunit [Hydrogenobacter thermophilus TK-6] gi|288788343|dbj|BAI70090.1| glycine-tRNA ligase beta subunit [Hydrogenobacter thermophilus TK-6] gi|308752529|gb|ADO46012.1| glycyl-tRNA synthetase, beta subunit [Hydrogenobacter thermophilus TK-6] Length = 657 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 197/717 (27%), Positives = 319/717 (44%), Gaps = 82/717 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+PA++ + E L +L ++ + Y TP RL LY + Sbjct: 2 DLLIEIGTEELPAKVINHILEYLKESFGEVLGR-----KDAKLYGTPRRLALYYRDFENA 56 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 S + E +GP V G +A+ GFL+ + +I+K + Sbjct: 57 SILQEEVVVGPPVSVAYDSEGKPTRALLGFLQRVSASSEDVMRIRK--GDAEYIAIRKVY 114 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + D L + P PK MRW S S++RP++ I + E + Sbjct: 115 EGKKPLDALAERFEDILLSAPLPKRMRW-----DKSGLSFLRPIRWICALYGGE-----V 164 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L + T GHRF + I+++ Y L+E V+ D + R IL Sbjct: 165 VPLSFGSVKASRKTKGHRFLSQGWIELKDASEYEEKLKENYVIPDFKERLGMILAFLKEE 224 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + ++G + L +E+ LVE+ +G ++KYL LPE +I + +Q+ F + + Sbjct: 225 SYSLGGYPEYPEGLDQEVANLVEFPFAVVGELEEKYLELPERVIVTVLAHHQRFFCIK-K 283 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI +S D + IV G +V+ ARLEDAL F++ D Sbjct: 284 EGRLLPNFIGISGNLPKD--SLIVMGYQKVIRARLEDALFFYRED--------------- 326 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVD 412 L L+ + +L VVFH K G E+ R+ L ++I + + + + Sbjct: 327 -----LKVKLEHLVDKLSQ--VVFHPKAGNMLEKTQRLVYLSEEIGRHLMLNEETIAKIK 379 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSKADL T +V+EF ELQG +G YA LQ E+ AI EH P +P + Sbjct: 380 RASYLSKADLLTNMVKEFDELQGYMGYIYATLQGEDKDVSYAIYEHYLP------MPEST 433 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 + +SLADK+D+++ F E PSGS DPY LRR GI I+ + DI L + IE Sbjct: 434 VGKVLSLADKIDSIVMFIKAGEIPSGSSDPYGLRRHAYGIFAIMEDALWDIDLRKLIEKF 493 Query: 531 ----DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAK 585 + L F RL+ YL +D++ A+L + L+ + ++K + K Sbjct: 494 YGGTNPQLEAFLRGRLEAYLEVYG--YDVVRAVLEVHDPLKPLSCIKMVKRIASLKEEQK 551 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 + + + +R+ +IL E + + + + L+ + + Q+ +D Sbjct: 552 FKDVVSAYRRVVRILPKEWEDSMVEEEVLKEKEE-----INLWEKVKELNFKAQDVLD-- 604 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L + E ++ FFD VLV D ++ NRL+LL +K + + +V Sbjct: 605 --------LQPLKESVDAFFDAVLVMDKDERIKRNRLALLCNVKQLFNKFADFSMLV 653 >gi|308801046|ref|XP_003075304.1| putative aminoacyl-t-RNA synthetase (ISS) [Ostreococcus tauri] gi|116061858|emb|CAL52576.1| putative aminoacyl-t-RNA synthetase (ISS) [Ostreococcus tauri] Length = 950 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 171/729 (23%), Positives = 304/729 (41%), Gaps = 74/729 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D L+E+ +EE+P + AA L + L G+ ++ + TP R + +K LSP Sbjct: 263 ADCLIELGTEELPPQDVASAARQLFDAVDAALAAAGLTHEGVCVGSTPRRFAIDIKALSP 322 Query: 62 HSPEKIEERLGPRVG--------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+ E GP + KA GF + G+ + + GD AV+ Sbjct: 323 GQPDVEERVRGPPLSRAFEDDGVTPSKAAMGFCKKNGVDASALER------DGDYVWAVV 376 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K R VL+ ++P I + +P++MRW+ S ++ RPL+ ++ + Sbjct: 377 KKEGRSASAVLEDVLPKIIAGITFPRTMRWAAN----SEAAFSRPLRWLVG-----AHGD 427 Query: 174 KIIDLDLKEIPCGNITYGHRFHAP--HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + + + + G T R V + Y LE+ ++++ E R + I +D Sbjct: 428 RHLAFEALGVHSGTTTRLLRTRGDVTDVHTVANAAAYHALLEKEGIVVNFEDRMSRIWSD 487 Query: 232 AHRLASAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A A +VG ++ E + LLEE+ LVE V G FD+ +L LP+E++ + ++ +Q+ Sbjct: 488 ARAAAKSVGGDVPESSREGLLEEVANLVEAPTVITGDFDEAFLSLPKEVLVMVMRKHQRY 547 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +G L F+ +N +G + GN V+ AR EDA F++ D Sbjct: 548 FPVENADGSLKPHFVTFANGPCDEG--VVKHGNESVLRARYEDAKFFYESD--------- 596 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L K L L + F ++G E+ R+ L +A ++ D A Sbjct: 597 -----------LKKKLADFKPELS--GITFQQELGNMLEKTRRVEGLVSDVAAVLGYDSA 643 Query: 410 LVDRAIV---LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +V A L++ADL + +V E L G +G+ YA + +AI E PR + Sbjct: 644 VVATATHAAGLARADLASSMVMELTALAGTMGRHYAREEGLPADVSEAIFEACLPRSAGD 703 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P ITV++ D+LDTL+ +A+ P S DP+ LRRA G+++ ++ + + Sbjct: 704 LLPKTPAGITVAVTDRLDTLVGLFAVVGGPKASADPFGLRRAAYGLVQTLVASGATCDMR 763 Query: 527 QFIED--------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +E + F RL+ D + + A+L+ +N Sbjct: 764 SLVEIAATKQPVPVSNERVDECVTFITRRLEQLFIDAGNDVERVRAVLKERGNNPALASA 823 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L E + R +++ K L I+ + E+ L+A Sbjct: 824 SVAQLVS-ADEKSLETCMRVLSRPTRLVR--GKMEDGTDLTINEASFECDEERALHAAYV 880 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 I E + FFD+V V +D E++ NR+++ + + Sbjct: 881 AARAKITEGCSVTDLIAAVCEMDDAS---TAFFDKVFVMAEDPELKRNRVAMCAAVARLP 937 Query: 693 LIVINVQKI 701 V++ ++ Sbjct: 938 AGVLDFGEL 946 >gi|157363331|ref|YP_001470098.1| glycyl-tRNA synthetase, beta subunit [Thermotoga lettingae TMO] gi|157313935|gb|ABV33034.1| glycyl-tRNA synthetase, beta subunit [Thermotoga lettingae TMO] Length = 671 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 178/717 (24%), Positives = 315/717 (43%), Gaps = 73/717 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLEI EE+PA + + L ++ L E+ + ++ + T R+ + +K ++ Sbjct: 6 LLEIGIEELPASEMSQIQQQLQLLTEKLFTEKRLAFRTVLSVVTNRRMAVLVKEIAERQE 65 Query: 65 EKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 + I E+ GP G KA+ GFL S + D + K + + P R Sbjct: 66 DSILEKRGPSKSTAFLDGKPTKALIGFL-SANEASEEDIYL-----KDEYVYIRKKVPGR 119 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 +VL I IQ + + KSMRW + ++RP+K ++ +L +I+ Sbjct: 120 KASEVLPEIFTEVIQSLKFTKSMRWGNGK-----YLFVRPVKWVVLML-----NNQILPF 169 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 + N T GH I V++ YI L+ VL++ E R I + ++ Sbjct: 170 QIFGKNSSNKTQGHPNL-QKVITVENCADYIDLLKNHYVLVNQEERIEKIKAELAKIEKE 228 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 L DK+L+++I L+EW +G F ++YL LPEELI +T+K + F T + Sbjct: 229 HFLTCDRDKELIKKISNLLEWPTAIVGKFKEEYLNLPEELITVTVKHHLSAFTTFENQ-K 287 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 + F+ + + + G S VV ARLEDA ++++ D+ Sbjct: 288 ITPYFVAFIDNPFGNIEKITI-GYSNVVNARLEDARYYFEIDKRY--------------- 331 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA--LVDRAIV 416 L+ RL +VF ++GT ++V RI+ L +A+ + + RA + Sbjct: 332 -----NLEDFNERLK--GMVFQKELGTLFDKVLRIKKLSLYMAEKLGLSQMAEKIGRAAI 384 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 LSKAD+ + +V EFPELQG IGK YA++ E+ +AIEE P Sbjct: 385 LSKADIASHVVYEFPELQGTIGKLYALMNEEDAEVAEAIEEQYFDE------PKTITGSI 438 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------- 528 +++AD++DT+I A+ PSGS+DP+ LR + I + I+ K D+ L + Sbjct: 439 IAIADRIDTIIGNLAVGNIPSGSRDPFGLRNKSDVIFKTIVNRKWDLDLEELIRETLKLL 498 Query: 529 ---IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + + + F +R +L +DL A+ + L + + L E + Sbjct: 499 SITCKWEIISDFMSNRYYAFLSGEGFNYDLSRAVNHLWSKPLRGFLS-ARALAEMVKNNS 557 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 + + +R+ I + AE L + + + S+ Sbjct: 558 FNELCVGFERVHNITKNFN------DTKFDGALFEENAEIELLNRFIEVKSTVVSSLKEL 611 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y + L ++ I+ +FD V V V+ ++R NRL+ L+ I + +++ ++ +++ Sbjct: 612 DYERGVSSLITLKPFIDKYFDDVFVMVNREDIRKNRLAFLKNIDELFMMIGDLTQLI 668 >gi|148261175|ref|YP_001235302.1| glycine--tRNA ligase [Acidiphilium cryptum JF-5] gi|146402856|gb|ABQ31383.1| glycyl-tRNA synthetase beta chain [Acidiphilium cryptum JF-5] Length = 723 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 224/732 (30%), Positives = 334/732 (45%), Gaps = 100/732 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F LE++SEEIPARMQ AAE L+ ++ L + ++++ + R+ + + Sbjct: 1 MAEFFLELFSEEIPARMQEAAAEQLAKLVGAQL--APLSPRDIKAFGAARRIAVVAT-ID 57 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 PE E GP++ A +A++GFLR G + +++D +L P R Sbjct: 58 AEVPESASELRGPKLAAPPQALEGFLRKNGAA--REELVEEDG----YFLLRRNLPSRPA 111 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ A+ WPKSMRW AF+W+RPL+ ++C+L E ++ L Sbjct: 112 GELIAGEFAQALAGFGWPKSMRWG----QSGAFTWVRPLRRVVCLLDGE-----VVPFTL 162 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G+ + GHRF AP +V S + +L V++D + RR I A G Sbjct: 163 GPVASGDESEGHRFLAPGAFRVSSAAQWREELRARFVIVDADERRERIRAGLRAAAGDKG 222 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L + D LL+E+ GLVEW +G+ D + LP E+ L++K NQ+ F TR G A Sbjct: 223 LGVAGDAGLLDEVAGLVEWPVCLIGAIDPGQMALPPEVRELSMKVNQRYFATRDAAGTPA 282 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F V+NI A+DGGAAI+ GN RV+ ARL DA HFW +D+ Sbjct: 283 PYFAFVANIAANDGGAAIIAGNERVLRARLADAEHFWAQDR------------------- 323 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI---AQLIDADVALVDRAIVL 417 + L+ + +LD V FHAK+GTQ R RI L ++I A RA L Sbjct: 324 -KQTLESWLPKLD--AVTFHAKLGTQHARAGRIEALAREIALALGADAAAADAAARAGRL 380 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 KADL + +V EFPELQG +G YA E + AI H +P+GP + VP+ +S V Sbjct: 381 CKADLVSGMVGEFPELQGIMGGYYAEASGEGDAIAGAIRTHYQPKGPSDEVPSGVVSAAV 440 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 +LADK+DTL F+ I EKP+GS DPYALRRA LG+IRI+L N+ +PL Q ++ Sbjct: 441 ALADKIDTLAGFFVIGEKPTGSGDPYALRRAALGVIRIVLVNRFALPLRQILDVAVERIS 500 Query: 531 --DQNLILFFHDRLKLYLHDR----DIRHDLIEAILRPEN-------------------- 564 D+ Y + R + + Sbjct: 501 ESIFAAAEETTDKAIAYAQSQNVPVGARARFFARVTVLDPASGKQINSRVPEIFDFIIDR 560 Query: 565 ------------------------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 D+L ++ + L F ++ G L + +R IL Sbjct: 561 LRVLLRSEGKRFDVLNAVLDTARDDDLTRLIARTEALGAFLATEDGANLLAAYRRSTNIL 620 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 IE+ K+ I P L AE L + + + + ++ P Sbjct: 621 RIEDAKDGPHEGTIDPGLLAEAAEIALADALEAVDREAVRRLADEDFAGAMRGFAALRAP 680 Query: 661 IEIFFDQVLVNV 672 ++ FFD V VN Sbjct: 681 VDAFFDHVTVNA 692 >gi|254525694|ref|ZP_05137746.1| glycyl-tRNA synthetase, beta subunit [Prochlorococcus marinus str. MIT 9202] gi|221537118|gb|EEE39571.1| glycyl-tRNA synthetase, beta subunit [Prochlorococcus marinus str. MIT 9202] Length = 718 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 182/751 (24%), Positives = 333/751 (44%), Gaps = 83/751 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA H + ++ + + + TP R+ L L+GL Sbjct: 1 MSKYLLEIGTEELPANFSHYVLNQFKSQIEFEFDKKLIKFNKISCTSTPRRIVLLLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++I R GP+ G KA GF S G+ ++ +KG Sbjct: 61 DRGDDEIIIRKGPKASSAYINGTPTKAAVGFANSLGIDVDDLEI--ENTEKGGFVFGKKV 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + L I+P I+ + P+ M+W + F + RP++ ++ I E Sbjct: 119 RKGESTRISLSLIIPKVIKSLQGPRFMKWGNGN-----FKFSRPIRWLVSIYNDEILDFN 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +D +I GN++ HR I++ S ++Y L E VL+ E R+ I+N ++ Sbjct: 174 -LDECDPKIVVGNLSKSHR-LIDKVIEINSPENYFEILAENGVLVKREERKEKIINFINQ 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + ++ L+ +LL E+ LVE+ V G F++++L LP E++ + +K++Q+ Sbjct: 232 SSESLNLKPDLSDELLNELTDLVEFPNVITGKFEEEFLDLPVEVLSMVMKSHQRYIPLLK 291 Query: 295 REG----------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 + + + L+ + + IV+GN +V+ AR DA F + D+ Sbjct: 292 KSDSFSKLDLSSEQIISTNFLLISNGLQESNNIIVKGNEKVLKARFSDAKFFVESDKTVS 351 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 +R +L V + G +RV RI+ + K+ + + Sbjct: 352 S--------------------SERNEKLK--SVSYLKGFGNVFQRVERIKFIALKVLKNL 389 Query: 405 D---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + D + A SK DLC+EIV EFPELQG +G +Y + + C A+ EH P Sbjct: 390 NDKFLDKEKIIEAANFSKNDLCSEIVYEFPELQGIMGGKYLKYEGYSEEVCLAVAEHYLP 449 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 + +P+ K +S+ADKL+TLI+ + ++PSGS DPYALRR G+++I+ ++ Sbjct: 450 SSSKDELPSTKYGAIISVADKLETLISIFVSGKRPSGSSDPYALRRNLNGVVKIMWNFEL 509 Query: 522 DIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 D + E +LI F R++ +L + I +L+ AI Sbjct: 510 DFLIENLFEELLEYWKTSLPNLNFIQKKVFDDLIEFLLQRIESHLEEISIDKELVRAICS 569 Query: 562 PE------NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE-- 613 + N+ + + I+ ++ + ++ R+ ++ K +S E Sbjct: 570 SDEFFKKRILNITDLKNRIEAISIYKERGSFDEIQKIITRVSKLADSGNLKKDVLSNEGY 629 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ---VLV 670 I+ + + E +++ I + + + Y ++ +L + +E FD VLV Sbjct: 630 INKEIFEKQCELKVFEFIEELEGLFTK--NDWNYLKLLNLFEINSKNLEELFDNEKGVLV 687 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D ++R+NRL+LL +I+N L +I+ + Sbjct: 688 MSEDNQIRENRLNLLGFIRNYSLKIIDFTLL 718 >gi|57242321|ref|ZP_00370260.1| glycyl-tRNA synthetase, beta subunit [Campylobacter upsaliensis RM3195] gi|57017001|gb|EAL53783.1| glycyl-tRNA synthetase, beta subunit [Campylobacter upsaliensis RM3195] Length = 662 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 189/718 (26%), Positives = 330/718 (45%), Gaps = 75/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ LLKE + Y+TP RL + Sbjct: 1 MKELLIEILTEELPAIPFLKELPNIKGKWEKLLKEYHLE-AEFDFYYTPRRLVFFHPHFK 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G +A F++ G+ C ++ K +V Sbjct: 60 TKQENSLVEFIGAPKNVAYKDGKLSQAGLSFIQKVGIDETQICF--REIKGKEVLYYQKE 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +VL ++ ++ + + KSMRW F +IR +++I C+L E Sbjct: 118 LECKESSEVLGEMIESFLKSLHFGKSMRWGAYQ-----FEFIRAIRNIACVL-----GED 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + T+ HR + ++ Y LEE V+LDPE R+ I+ Sbjct: 168 LVKFQSYGVQSSKQTFVHRSVSYEAFAFKNAKEYFELLEENFVILDPEKRKEKIIESFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + L + +D +LLEE+I + E+ +GSF+ ++L +P E+I +++ NQ+ F T Sbjct: 228 IEAKENLNIAQDDELLEEVIAITEYPNALLGSFESEFLEIPSEVIITSMRENQRYFATFD 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + L+N FI+VSN D I+ GN RV+ ARL DA+ F+K D Sbjct: 288 EK-ELSNHFIVVSNAVCKDYSK-IIHGNERVLRARLSDAMFFYKND-------------- 331 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD-R 413 L + + + +++ +GT ++V R + L + + +D D + Sbjct: 332 ----------LQKGLEPEKLSKMLYLDSLGTVMDKVEREKALALLLCKFLDNDKQEAILQ 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ SKADL T++V EFP LQG +G YA + AI+E P +P+++ Sbjct: 382 AVHFSKADLATQMVYEFPNLQGIMGSYYAEKMGLSYEISLAIKEQYLPNQS--ALPSSEF 439 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----- 528 S V+LA K DTL++ ++I + PSG+KDPYALRRA GI++I+L L+ F Sbjct: 440 SSIVALAYKFDTLLSLFSIGKIPSGTKDPYALRRAANGILKILLHLGKKFDLNAFLKEAS 499 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + +L F +R+ + I+A+L +N +L+ I +K L E Sbjct: 500 KTYKSFDLNSLYDFILERIYPFYE---ANPSFIKAVLSTKNSDLIHIDTAVKALIELSKK 556 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I E I+ EAEK+LY + S+ Sbjct: 557 TNFNENFSTFKRLANIATKNE-------NLINESLFENEAEKKLYLAFKE-------SLK 602 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + Q + L ++ I+ FF+ V++N ++ ++++NR +L+ I N L + +++++ Sbjct: 603 VQNLKQKLESLFALKPFIDEFFENVMINSENEKLKNNRQALIFTIYNEFLKIADIKEL 660 >gi|311087031|gb|ADP67111.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 690 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 204/691 (29%), Positives = 334/691 (48%), Gaps = 62/691 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 6 LLIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDIDITE 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ GP + G +A +L+ G+ ++K + KG+ RK Sbjct: 66 RFVEIKKRGPSIINSYDKDGFLTEAATRWLKHCGININQAIRLKNE--KGEWLFYKTRKK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + IE ++ I A++ + KSMRW + + RP+++I+ +L +K+I Sbjct: 124 QENIESLIPKITESALKNISIKKSMRWGQDNQ-----KFSRPIRNIVILL-----DKKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILNDAHRL 235 D+ I N+ H IK++ Y LE+ ++ D R+ I+ D + Sbjct: 174 PGDIFNITSKNLLQNHLSSKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIEDIENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 234 AKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFPIYNS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 294 EKKLLPYFIFISNIQTQES-EKIIIGNQRVMHARLSDAEFFFKNDR-------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L + V+F +G+ E+ RI++L K IA+ +DV RA Sbjct: 339 ------KVKLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSDVEDSIRAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P I Sbjct: 391 LLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCTPIGC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 451 GLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKKSLSL 510 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I FF RL + + +I+++L ++ L+ I I+ ++ Sbjct: 511 YNKKNEEDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQAISF 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F + + Sbjct: 571 FKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFDNYTK 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 K+Y+ I + S PI FF +V + Sbjct: 628 NLFLEKKYNDILIKIKSFENPIYNFFKKVKI 658 >gi|15616755|ref|NP_239967.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681510|ref|YP_002467895.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471191|ref|ZP_05635190.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11135203|sp|P57235|SYGB_BUCAI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781844|sp|B8D8T6|SYGB_BUCA5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|25293201|pir||E84945 glycine-tRNA ligase (EC 6.1.1.14) beta chain [imported] - Buchnera sp. (strain APS) gi|10038818|dbj|BAB12853.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624353|gb|ACL30508.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 690 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 204/691 (29%), Positives = 334/691 (48%), Gaps = 62/691 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 6 LLIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDIDITE 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ GP + G +A +L+ G+ ++K + KG+ RK Sbjct: 66 RFVEIKKRGPSIINSYDKDGFLTEAATRWLKHCGININQAIRLKNE--KGEWLFYKTRKK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + IE ++ I A++ + KSMRW + + RP+++I+ +L +K+I Sbjct: 124 QENIESLIPKITESALKNISIKKSMRWGQDNQ-----KFSRPIRNIVILL-----DKKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILNDAHRL 235 D+ I N+ H IK++ Y LE+ ++ D R+ I+ D + Sbjct: 174 PGDVFNITSKNLLQNHLSSKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIEDIENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 234 AKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFPIYNS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 294 EKKLLPYFIFISNIQTQES-EKIIIGNQRVMHARLSDAEFFFKNDR-------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L + V+F +G+ E+ RI++L K IA+ +DV RA Sbjct: 339 ------KVKLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSDVEDSIRAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P I Sbjct: 391 LLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCTPIGC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 451 GLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKKSLSL 510 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I FF RL + + +I+++L ++ L+ I I+ ++ Sbjct: 511 YNKKNEDDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQAISF 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F + + Sbjct: 571 FKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFDNYTK 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 K+Y+ I + S PI FF +V + Sbjct: 628 NLFLEKKYNDILIKIKSFENPIYNFFKKVKI 658 >gi|124023374|ref|YP_001017681.1| glycyl-tRNA synthetase subunit beta [Prochlorococcus marinus str. MIT 9303] gi|123963660|gb|ABM78416.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9303] Length = 721 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 181/752 (24%), Positives = 312/752 (41%), Gaps = 84/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L+EI +EE+PA A L ++ L+ + Y ++ TP RL + ++ L+ Sbjct: 1 MSTLLVEIGTEELPADFARLALPQLEQMVSRDLQGLRLSYGMIQCTSTPRRLVVLVEDLA 60 Query: 61 PHSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + E R GP G +A GF + GL+ ++ KG A + Sbjct: 61 SATADLEEVRKGPPAGQAFKNGVPTQAAAGFAKRCGLKPEDLEI--RETPKGPFVFATVL 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L +P I + + MRW + RP++ ++ +L E Sbjct: 119 EHGRSAMELLTDQIPEWIGSLQGRRFMRWGEGER-----RFSRPIRWLVALLD-EQIIPV 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +D EI N++ GHR H + + S Y++ L E V +D + R I + Sbjct: 173 CLDGGDPEICAANLSRGHRLH-DQAVIIPSAGSYVQTLAEVGVEVDRQKRGTLIRHAIDT 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ + DL EE+ LVE + G+F K YL LP E++ ++ +Q+ Sbjct: 232 AAAGLEACPDCPDDLFEELTDLVEAPLLLEGAFAKSYLDLPAEVLSTVMRVHQRYVPLYR 291 Query: 295 -----------REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 + L F+ +SN A ++ +GN RV+ ARL DA F + D+ Sbjct: 292 LDAVNDPLALDAKSSLLPRFLCISNGLAK-ASDSVRRGNERVLKARLADAEFFVEADR-- 348 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 L R + V F +G+ +RV R+ L + +L Sbjct: 349 --------------------SLASIERRKKLAHVTFAEGLGSLLDRVERMEWLTDVLVEL 388 Query: 404 IDADVA---LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 +D V RA+ L K DL +++V EFPELQG +G +Y + + E A+ EH Sbjct: 389 LDLSAEISVQVRRAVHLCKHDLVSQMVGEFPELQGVMGAKYLLAEGEPREVALAVLEHYL 448 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PRG + +P ++ ++LA++L+ L++ +A ++PSGS DPYALRRA G+++I+ Sbjct: 449 PRGAGDALPESESGAVLALAERLELLLSIYAKGDRPSGSSDPYALRRAGNGLLQILWSKG 508 Query: 521 IDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAI- 559 + L ++ L F R+ L + DL +A+ Sbjct: 509 WRLNLLALLQRATNHWSKLLPHLKVTPSALAAELSEFLRQRMLSLLEEAGTDTDLAQAVA 568 Query: 560 -----LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE- 613 + + + L + K R ++ + +S Sbjct: 569 GETVLIDRLLSDPADARLRVDLLVRMRRTGKLLAVQAVVTRAARLAEKGDLPATVLSAAE 628 Query: 614 -ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVL 669 + P +E + V+ I + +RY + D L + E + FFD V+ Sbjct: 629 VVDPGLFEKPSELEMLKVLDALEP-ITKDSSSERYRHLADGLIAGSEALAAFFDGDQSVM 687 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V +D VR NRL+LL ++N ++ + +I Sbjct: 688 VMSEDLAVRANRLNLLSLLRNQAGVLADFSQI 719 >gi|254468463|ref|ZP_05081869.1| glycyl-tRNA synthetase, beta subunit [beta proteobacterium KB13] gi|207087273|gb|EDZ64556.1| glycyl-tRNA synthetase, beta subunit [beta proteobacterium KB13] Length = 693 Score = 459 bits (1180), Expect = e-126, Method: Composition-based stats. Identities = 193/709 (27%), Positives = 349/709 (49%), Gaps = 58/709 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P Q + ++ L+ + L + N + Y TP R+ + + SP+++ E Sbjct: 16 PPSSQKQMSDFLATEIFNQLNQNKFTTSNSKLNIYSTPRRIGFKISHTATKSPDELTEIK 75 Query: 72 -GPRVGAG--KKAIDGFLRSTGLQTISDCQIKKDPKK----GDVYLAVLRKPKRLIEDVL 124 P+ +A ++ L++++ +K +V A I + + Sbjct: 76 LMPKKIGWVDDQAAAPLIKK--LESLNLIDLKDSLDNFIIQDEVLYAKKNIEGTSIVEFI 133 Query: 125 KTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIP 184 + + ++K+P K M + ++ ++ RP +++C+ +E I+D+++ + Sbjct: 134 QKELNQVLKKMPIEKVMSYQLADG-WTSVNFARPAINLICMHGSE-----ILDIEILGLK 187 Query: 185 CGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASA--VGL 241 NI GHRF + + +++ D Y LE+ V+ + + R + I N L Sbjct: 188 ANNIIQGHRFESTEALSLKNADQYEDLLEKKGNVIPEFDKRYDEIQNQISHLVKNLGNNY 247 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 D +LLEE+ LVE MGSFD ++L +P E + L++K+NQK F ++ L N Sbjct: 248 SCPLDNELLEEVTTLVEKPNAMMGSFDSQFLDIPSECLILSMKSNQKYFPVL-KDNQLTN 306 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 FIL+SNI D + +++GN +V+ RL DA F+ +D+ Sbjct: 307 KFILISNIYPKD-PSMVIKGNEKVIYPRLADAEFFFSQDK-------------------- 345 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDRAIVLSKA 420 + L ++ LD ++V+H K+G+ ER + + I + + D L+KA Sbjct: 346 KRSLTAMVSDLD--NIVYHQKLGSLNERCLSVSKIFNHIRENTTLNSNHDSDLLAKLAKA 403 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +GK YA+ + + AIE+H KP+ + +P N S+ +SLA Sbjct: 404 DLSSLMVGEFPELQGIMGKYYALASDMDEDFAQAIEDHYKPKFSGDELPKNDTSLILSLA 463 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----------IE 530 DK TLI+ ++I EKPSG KDP+ALRRA + IIRI++E I++ L + + Sbjct: 464 DKFTTLIDLFSIGEKPSGVKDPFALRRAAISIIRILIECDINLDLIELINKTFPGDHEED 523 Query: 531 DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 LI F +DRL+ ++ DR +++++ + + I+ ++ +NEF E Sbjct: 524 KAQLIDFIYDRLENFIKDRGYETLVVQSVCDSQPRLINDIIFKVEAVNEFKKIDLSENLA 583 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 S KR+ IL K + ++ +++ L ++EK LY I + + ++ K+Y+ + Sbjct: 584 QSNKRVLNILK---KYDNPLTDKVNQDLLESDSEKLLYQSIVKVNENNKGYLEAKKYNIL 640 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + L + EPI+ FF+ +VN DD++++ NR LL + + I+ N+ Sbjct: 641 LNNLIHLSEPIDNFFEDTMVNADDKDIKHNRHLLLSELNKAMNIIANLS 689 >gi|258611682|ref|ZP_05711600.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL R2-503] gi|258605382|gb|EEW17990.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL R2-503] Length = 622 Score = 459 bits (1180), Expect = e-126, Method: Composition-based stats. Identities = 173/648 (26%), Positives = 299/648 (46%), Gaps = 68/648 (10%) Query: 76 GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKV 135 G KA GF +S + ++ K + +L + + + + Sbjct: 18 GNWSKAALGFAKSQKVAPED--LTFREIKGVEYIYIKKEVIGEKTTALLPS-LEKVVTSM 74 Query: 136 PWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFH 195 +P SM W + +IRP+K ++ + E+II ++ + N + GHRF Sbjct: 75 TFPVSMHWGSND-----LRYIRPIKWLIAMF-----GEEIIPFEITGVSTSNTSRGHRFL 124 Query: 196 APHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIG 255 + Y L E V+++ R+ AI+ L + ++ ED DLLEE+ Sbjct: 125 G-KTATINQPSDYPNALLEQFVVVNASERKQAIVEQLRELETMENWQIREDDDLLEEVTN 183 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGG 315 LVE+ V G+F+K+YL LPEE++ T+K +Q+ F ++EG L F+ V N + Sbjct: 184 LVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPVFSQEGELLPHFVTVRNG-NHENL 242 Query: 316 AAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDML 375 + +GN +V+ ARL DA F++ D L +D+ +A+L Sbjct: 243 DTVARGNEKVLRARLSDADFFYQED--------------------LKITIDEAVAKLQ-- 280 Query: 376 DVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLCTEIVREFPE 432 ++VFH K+GT E++ R++ + +A ++ D + R + K DL T IV EFPE Sbjct: 281 NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQDIIRLTNIYKFDLVTNIVGEFPE 340 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G++YA+LQ E + AI EH P ++P + +++ADKL+TLI F+ + Sbjct: 341 LQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDLPQTDLGSLIAIADKLETLIGFFCV 400 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------------------QN 533 N P+GS DP+ LRR+ G +RII N DIP+ + + + Sbjct: 401 NIAPTGSADPFGLRRSAFGAVRIIQANGWDIPMLEVVSRIVDMERAEGATELPSSDVIKE 460 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSA 593 + F +RL++ L IRHD+I+A++ + + + ++D + LN+ + + + Sbjct: 461 VQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNMIPQLIDRAQILNKHADAEWFRPTIEAL 520 Query: 594 KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 R+ I E +E+ P E E+ L+ + R Sbjct: 521 TRVVNISKKYEDG-----VEVDPSLFENEYEQALFDKLEKLKFDFAGLKIVDR----LKA 571 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + I+ +FD LV D+ E+++NRL+LL + + I + +I Sbjct: 572 FADLRTTIDAYFDNTLVMTDNDELKNNRLALLFELASFIKEFAQMDEI 619 >gi|330867892|gb|EGH02601.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 501 Score = 459 bits (1180), Expect = e-126, Method: Composition-based stats. Identities = 170/540 (31%), Positives = 257/540 (47%), Gaps = 48/540 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKD-PAQIVAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 >gi|25009294|sp|Q8KA07|SYGB_BUCAP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|21623027|gb|AAM67695.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 691 Score = 458 bits (1179), Expect = e-126, Method: Composition-based stats. Identities = 202/728 (27%), Positives = 343/728 (47%), Gaps = 69/728 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI +EE+P+ + K + L ++Y+N+ + TP RL L + L Sbjct: 4 KTFLVEIGTEELPSNILKKIILVFYKNFVDELSFNKILYKNINYFSTPRRLALQIIELDT 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + GP + G KA + +S + ++K G+ + ++ Sbjct: 64 SEKINEKIKKGPAIKHAFDENGNPTKAAYYWAKSCKINLNQAERLKTKT--GEWIIHRIQ 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K IE + I+ ++++ +MRW + +IRP+++I+ +L EK Sbjct: 122 EKKEKIELLFPKIIEKILKQINLKNTMRW-----ETTNLRFIRPIRNIVMLL-----DEK 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 II ++ +P N Y H I +++ Y L + ++ + E R+ I +A Sbjct: 172 IIKSEVFNVPSNNFLYHHISCKEEKIYIKNAIEYPAVLFKKNKIIANYETRKEKIKYEAK 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLC-LPEELIRLTIKTNQKCFVT 292 ++A V + + LLEE+ LVE Q + F K Y+ +P++++ TI+ Q+CF Sbjct: 232 KIAKKVDGIIKTNPFLLEEVTSLVESPQALLARFKKDYINYIPKKILIHTIEKQQRCFSI 291 Query: 293 RTREGV--LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + + FI +SNI++ I+ GN +V+ ARL DA+ F K+D+ Sbjct: 292 YSNNSKKEILPYFIFISNIKSKKNKE-IILGNEKVMHARLSDAMFFLKQDR--------- 341 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVA 409 + L+ + L V F+ +GT E+ R+++L + I+ + + Sbjct: 342 -----------KRKLENYLPFLK--KVSFYNNLGTLYEKTLRLKLLIESISCYTNTINKN 388 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R+ VLSK DL T++V EFPELQG IG YA+ EN AI+E P + +P Sbjct: 389 DLIRSAVLSKCDLITQMVDEFPELQGTIGMYYALENKENKEVAIAIKEQYLPSFSGDELP 448 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I +S++DK+DTL +AI E P+ KDP+ LRRA LGI+RII+ KI I L + I Sbjct: 449 STPIGCLLSISDKIDTLSGMFAIGETPTPEKDPFGLRRAALGILRIIITKKIPIDLKKII 508 Query: 530 E----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 E + +I FF RL + + +I+++L + L I Sbjct: 509 EISLKIYTFKKVNYSIISKKIIKFFISRLSFFYEKKGYSTKVIKSVLSCKLTEPLDIDKR 568 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I +++ E +L AKRI I+ ++ IS EI + + EK L I Sbjct: 569 INAISDLKKI---ESIILIAKRIDNIVKN---NHQIISSEIHVELMKKTEEKNLLKEIKI 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 F + +E K+Y +I + + +PI+ FFD+V +N + E+R NRL LL I+ L Sbjct: 623 FNSKTKELFIQKKYKEILVEIKKLEKPIDNFFDKVQINHSNFEIRQNRLLLLIKIQKFFL 682 Query: 694 IVINVQKI 701 + N + Sbjct: 683 KIANFSYL 690 >gi|303282639|ref|XP_003060611.1| predicted protein [Micromonas pusilla CCMP1545] gi|226458082|gb|EEH55380.1| predicted protein [Micromonas pusilla CCMP1545] Length = 963 Score = 458 bits (1179), Expect = e-126, Method: Composition-based stats. Identities = 171/727 (23%), Positives = 308/727 (42%), Gaps = 75/727 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DF +EI +EE+PA A+ L + L+ G+ + + TP R+ + + L+ Sbjct: 276 ADFFVEIGTEELPAADVTTGAKQLLNAVKACLETAGLKHDGVTYGATPRRMVVRVANLAA 335 Query: 62 HSPEKIEERLGPRVG--------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 K E GP + KA GF + G+ K G+ A + Sbjct: 336 SQESKEERNRGPPLSRAFEEDGTTPTKAALGFCKKNGVDPADL------EKDGEYIWANV 389 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + DVLK +P + + +PK+MRW++ + + RPL+ +L + E Sbjct: 390 KTTGKAAVDVLKEALPGMVSSINFPKTMRWNSEST------FSRPLRWLLAM-----HGE 438 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + +P G+ T R A ++V+ H+ L + +D E RR I + A Sbjct: 439 HHVPFTALNVPSGSTTRLLRNSATPVVEVKDSAHHASALAADTIEIDFEARREMIWSTAG 498 Query: 234 RLASAVGLELV----EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA+ VG + E L++E++ L+E +G+FD +L LP+E++ + ++ +Q+ Sbjct: 499 ELAAGVGGVVPASSGEPGGLIDEVVNLIESPTPILGNFDAAFLSLPKEVLVMVMRKHQRY 558 Query: 290 FVTRTRE-GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F E G L F+ V+N A+ GN V+ AR +DA F++ D Sbjct: 559 FPVENAETGDLLPHFVTVANGAVD--PDAVRHGNECVLKARYDDAQFFYEADT------- 609 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 SK L +L+ + F ++GT E+ R+ L +A+ + Sbjct: 610 -------------SKSLADFKPKLE--GITFQTELGTMLEKTERVEKLAPTLARALGFSD 654 Query: 409 ALVDRAIVLSKADLC---TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 A A + T++V+EF L G +GK YA + CDAI E PR Sbjct: 655 ADAKVAAEAAALARADLATQLVQEFTSLAGVMGKHYATREGLPAPLCDAIFEAALPRSSG 714 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +PT+ + V++AD+LDTL+ +A+ P + DP+ LRRA G ++ ++ + + L Sbjct: 715 DLLPTSNAGVAVAVADRLDTLVGLFAVVGAPKATADPFGLRRAAYGAVQALVSSNVRCDL 774 Query: 526 SQFIED--------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +++ + + RL+ +L D +++ A L + Sbjct: 775 RAALKEAAALQPVTCGDDVVTECLEYVTRRLEQFLVDDGCGAEVVRAALAERGGDPALAA 834 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L F + + + R +++ K LE+ + E E L+ Sbjct: 835 TTARALETFVGGDELKAAIAVLARPTRLVR---GKELPEDLEVKRESFAEEEETALWDAY 891 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 I + + + EP E FFD+V V ++ E+R NRL+L+ + ++ Sbjct: 892 EKAAAKIGDK-STASVEDLLSAAALLVEPSEAFFDKVFVMAEEPELRRNRLALVNAVASL 950 Query: 692 ILIVINV 698 V+++ Sbjct: 951 PNGVVDL 957 >gi|58584628|ref|YP_198201.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418944|gb|AAW70959.1| Glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 702 Score = 458 bits (1179), Expect = e-126, Method: Composition-based stats. Identities = 220/732 (30%), Positives = 350/732 (47%), Gaps = 72/732 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 L E SEEIP+RMQ+ AA + + + V + ++ + T R+ L++ +S Sbjct: 3 SQLLFECLSEEIPSRMQNSAAAQVKNYITNAFNKNNVKFASIEVFITARRITLFVDNISI 62 Query: 62 HS-PEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +E GP V A K AI+GFLR + D Y I Sbjct: 63 SGLKGSNDEIKGPNVNASKSAIEGFLRKNKKSETDLL--VRKVNNVDFYYLKKDVYSFNI 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ LK+ + ++ WPKSMRWS W+RP+K+ILC L +II + Sbjct: 121 KEFLKSQLEEMLKNFSWPKSMRWSERKE-----RWVRPIKNILCTL-----NNEIIPISF 170 Query: 181 KEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I NITYGHRF + + V++ Y LE+ V+L P R+ IL+ ++ Sbjct: 171 AGITVCNITYGHRFLSSGTALTVKTPKDYFELLEKNNVILQPGKRKQFILDQINKFTKEQ 230 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKK-YLCLPEELIRLTIKTNQKCFVTRTREGV 298 L+L ++ LL E+ GL+EW V G +++ L LP+E+I I T QK G Sbjct: 231 NLQLEKNDYLLNELTGLIEWPIVLFGEVNQEKLLGLPKEVILSIINTQQKYLAL--SNGQ 288 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 + FI + +V+G++R++ ARL DA +D+ Sbjct: 289 KISHFI----TVVNVNNDEVVKGHARILEARLADAQFLISQDK----------------- 327 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALVDRAIVL 417 + LD + +LD ++FHA +G+ GE+V RI L K IA + + + RA L Sbjct: 328 ---KENLDYYVKKLD--SILFHASLGSVGEKVKRIITLSKYIAIYVPRVSLIKIGRAAYL 382 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL T IV+EFPELQG +G YA E+ +AI EH KP GP + P + +I + Sbjct: 383 AKADLATLIVKEFPELQGIMGGYYASYFQEDREIVEAITEHYKPIGPEQECPKSSAAIVM 442 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS----------- 526 S+ADK+D+L+ A EK SGS D + LRR +GIIR+ILEN + IP+ Sbjct: 443 SIADKIDSLVGLIAAGEKISGSYDQFGLRRMAIGIIRMILENNLHIPIRLLIDKSVSLYP 502 Query: 527 ---------------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTI 570 + + ++ F +R ++ L +RDIR D++++IL + + ++LLT Sbjct: 503 KLVFTKDVTSVDHPHKLSRAELVLKFCLERFRVILKNRDIRQDIVDSILCKDDINDLLTA 562 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYA 629 L+ + ++ +G++ L + KR+ I+ EK + S + ++L+ E L Sbjct: 563 ERQTVILDRYLNTPEGKQILSTYKRVSNIVNKAEKNDNTAYSAPYNKKFLIESEEMVLSD 622 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +I+++M ++ D L I F + V +N D ++R NRLSLL + Sbjct: 623 YAITACRNIKQAMQSGNFNAALDELIRFTPFINQFMNSVKINCDSDKLRRNRLSLLANVA 682 Query: 690 NIILIVINVQKI 701 + +V I Sbjct: 683 STFHLVACFNLI 694 >gi|311086449|gb|ADP66530.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 690 Score = 458 bits (1178), Expect = e-126, Method: Composition-based stats. Identities = 203/691 (29%), Positives = 334/691 (48%), Gaps = 62/691 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 6 LLIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDIDITE 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ GP + G +A +L+ G+ ++K + KG+ RK Sbjct: 66 RFVEIKKRGPSIINSYDKDGFLTEAATRWLKHCGININQAIRLKNE--KGEWLFYKTRKK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + IE ++ I A++ + KSMRW + + RP+++I+ +L +K+I Sbjct: 124 QENIESLIPKITESALKNISIKKSMRWGQDNQ-----KFSRPIRNIVILL-----DKKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILNDAHRL 235 D+ I N+ H IK++ Y LE+ ++ D R+ I+ D + Sbjct: 174 PGDVFNITSKNLLQNHLSSKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIEDIENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 234 AKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFPIYNS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 294 EKKLLPYFIFISNIQTQES-EKIIIGNQRVMHARLSDAEFFFKNDR-------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L + V+F +G+ E+ RI++L K IA+ ++V RA Sbjct: 339 ------KVKLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSNVEDSIRAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P I Sbjct: 391 LLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCTPIGC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 451 GLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKKSLSL 510 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I FF RL + + +I+++L ++ L+ I I+ ++ Sbjct: 511 YNKKNEEDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQAISF 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F + + Sbjct: 571 FKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFDNYTK 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 K+Y+ I + S PI FF +V + Sbjct: 628 NLFLEKKYNDILIKIKSFENPIYNFFKKVKI 658 >gi|219682066|ref|YP_002468450.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254781845|sp|B8D740|SYGB_BUCAT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219621799|gb|ACL29955.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] Length = 690 Score = 458 bits (1178), Expect = e-126, Method: Composition-based stats. Identities = 204/691 (29%), Positives = 334/691 (48%), Gaps = 62/691 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 6 LLIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDIDITE 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ GP + G +A +L+ G+ ++K + KG+ RK Sbjct: 66 RFVEIKKRGPSIINSYDKDGFLTEAATRWLKHCGININQAIRLKNE--KGEWLFYKTRKK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + IE ++ I A++ + KSMRW + + RP+++I+ +L +K+I Sbjct: 124 QENIESLIPKITESALKNISIKKSMRWGQDNQ-----KFSRPIRNIVILL-----DKKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILNDAHRL 235 D+ I N+ H IK++ Y LE+ ++ D R+ I+ D + Sbjct: 174 PGDVFNITSKNLLQNHLSLKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIEDIENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 234 AKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFPIYNS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 294 EKKLLPYFIFISNIQTQES-EKIIIGNQRVMHARLSDAEFFFKNDR-------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L + V+F +G+ E+ RI++L K IA+ +DV RA Sbjct: 339 ------KVKLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSDVEDSIRAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P I Sbjct: 391 LLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCTLIGC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 451 GLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKKSLSL 510 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I FF RL + + +I+++L ++ L+ I I+ ++ Sbjct: 511 YNKKNEEDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQAISF 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F + + Sbjct: 571 FKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFDNYTK 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 K+Y+ I + S PI FF +V + Sbjct: 628 NLFLEKKYNDILIKIKSFENPIYNFFKKVKI 658 >gi|32266566|ref|NP_860598.1| glycyl-tRNA synthetase subunit beta [Helicobacter hepaticus ATCC 51449] gi|32262617|gb|AAP77664.1| glycyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] Length = 703 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 201/722 (27%), Positives = 333/722 (46%), Gaps = 64/722 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI++EE+PA K + + ++ + Y+TP R+ LY + + H+ Sbjct: 20 LLIEIFTEELPALPFLKELPHMVEKWQKIAQKHRIT-STPTLYFTPRRIVLYEQNFATHT 78 Query: 64 PEKIEERLGPRVGAG----------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + + E GP + KA + F + L T + +I+ K +Y A + Sbjct: 79 QDILIESYGPPLAIAFINGDKTKGLSKAGESFFKKLELPTNTPYEIRIKENKEVLYYAKM 138 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +D++ I+ ++ + + KSM W + S+IRP+++I +L E Sbjct: 139 -QKGVQTKDIVGEILIEWLKALQFGKSMFWGNLNE-----SFIRPVRNIFILL-----GE 187 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + + + + TY HR + P + S Y + LE++ V+L+ RR IL Sbjct: 188 QSVSFNAFGLHSIAQTYPHRDISFEPYAITSPSDYFQSLEKSKVILEQNKRRAMILEQIV 247 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + S +++ D+ LL EI+ + E+ + G FDK++L LP E+I ++K NQ+ F T Sbjct: 248 VIESQENIKVEIDEALLNEIVAITEYPRAAYGIFDKQFLQLPNEVIITSMKENQRYFATY 307 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L N F+LV+N A++ G IVQGN +V+ ARL DA+ F++ D N L + Sbjct: 308 -KDGHLHNGFVLVANSTAANLG-PIVQGNQKVLKARLSDAVFFYENDLKNGFAPEKLGQI 365 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L + + V+ + + KI I ++ Sbjct: 366 LFVDG------LGSLLDKTKRESVIALELL----------KFYTHKIDMKIQESQEILST 409 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL TE+V EF ELQG IG YA + AI+E P G +P++ + Sbjct: 410 AVKYAKADLLTEMVYEFTELQGIIGYYYAQSFGMHPLVAQAIKEQYLPTGEDSPLPSHIL 469 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------- 526 S ++L+ KLD + ++I++ PSGSKDP+ALRRA G+I+II +D LS Sbjct: 470 SAILALSIKLDNIFALFSIDKIPSGSKDPFALRRAANGVIKIIWHYGLDFDLSIDIPRLY 529 Query: 527 -----QFIEDQNLILFFHDRLKLYLHDRD--IRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + Q + FF +RL+ L IR L + + NL TI+ I+ L+ Sbjct: 530 QAGGYKPSNMQRIESFFLERLEGMLKVNPSLIRCVLNARVNNAKVRNLNTIIHNIEALSA 589 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 FF + + + KR+ IL + I I L E LY + Sbjct: 590 FFEKSDKQSLITLFKRVANILN-----DDIIPTHIDESLLSFPQEIALYQALKALKAK-- 642 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K + L S+ EP+E FF VLVN +D ++ NR L+ I N L + +++ Sbjct: 643 ---EFKDISEHIATLFSLKEPLEAFFASVLVNDNDNAIKTNRQMLILSIYNEFLRIGDIK 699 Query: 700 KI 701 I Sbjct: 700 DI 701 >gi|30410816|ref|NP_660484.2| glyS: glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 712 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 202/728 (27%), Positives = 343/728 (47%), Gaps = 69/728 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI +EE+P+ + K + L ++Y+N+ + TP RL L + L Sbjct: 25 KTFLVEIGTEELPSNILKKIILVFYKNFVDELSFNKILYKNINYFSTPRRLALQIIELDT 84 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + GP + G KA + +S + ++K G+ + ++ Sbjct: 85 SEKINEKIKKGPAIKHAFDENGNPTKAAYYWAKSCKINLNQAERLKTKT--GEWIIHRIQ 142 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K IE + I+ ++++ +MRW + +IRP+++I+ +L EK Sbjct: 143 EKKEKIELLFPKIIEKILKQINLKNTMRW-----ETTNLRFIRPIRNIVMLL-----DEK 192 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 II ++ +P N Y H I +++ Y L + ++ + E R+ I +A Sbjct: 193 IIKSEVFNVPSNNFLYHHISCKEEKIYIKNAIEYPAVLFKKNKIIANYETRKEKIKYEAK 252 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLC-LPEELIRLTIKTNQKCFVT 292 ++A V + + LLEE+ LVE Q + F K Y+ +P++++ TI+ Q+CF Sbjct: 253 KIAKKVDGIIKTNPFLLEEVTSLVESPQALLARFKKDYINYIPKKILIHTIEKQQRCFSI 312 Query: 293 RTREGV--LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + + FI +SNI++ I+ GN +V+ ARL DA+ F K+D+ Sbjct: 313 YSNNSKKEILPYFIFISNIKSKKNKE-IILGNEKVMHARLSDAMFFLKQDR--------- 362 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVA 409 + L+ + L V F+ +GT E+ R+++L + I+ + + Sbjct: 363 -----------KRKLENYLPFLK--KVSFYNNLGTLYEKTLRLKLLIESISCYTNTINKN 409 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R+ VLSK DL T++V EFPELQG IG YA+ EN AI+E P + +P Sbjct: 410 DLIRSAVLSKCDLITQMVDEFPELQGTIGMYYALENKENKEVAIAIKEQYLPSFSGDELP 469 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I +S++DK+DTL +AI E P+ KDP+ LRRA LGI+RII+ KI I L + I Sbjct: 470 STPIGCLLSISDKIDTLSGMFAIGETPTPEKDPFGLRRAALGILRIIITKKIPIDLKKII 529 Query: 530 E----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 E + +I FF RL + + +I+++L + L I Sbjct: 530 EISLKIYTFKKVNYSIISKKIIKFFISRLSFFYEKKGYSTKVIKSVLSCKLTEPLDIDKR 589 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I +++ E +L AKRI I+ ++ IS EI + + EK L I Sbjct: 590 INAISDLKKI---ESIILIAKRIDNIVKN---NHQIISSEIHVELMKKTEEKNLLKEIKI 643 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 F + +E K+Y +I + + +PI+ FFD+V +N + E+R NRL LL I+ L Sbjct: 644 FNSKTKELFIQKKYKEILVEIKKLEKPIDNFFDKVQINHSNFEIRQNRLLLLIKIQKFFL 703 Query: 694 IVINVQKI 701 + N + Sbjct: 704 KIANFSYL 711 >gi|123966059|ref|YP_001011140.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9515] gi|123200425|gb|ABM72033.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9515] Length = 719 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 185/751 (24%), Positives = 331/751 (44%), Gaps = 83/751 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA H + + ++ + Y+N+ TP R+ L+L+GL Sbjct: 1 MSKYLLEIGTEELPANFSHSVINQIYSNIKFEFDKKLIKYKNIICTSTPRRIVLFLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ +K R GP+ G +A GF S G+ + +KG+ Sbjct: 61 DYADDKRVTRKGPKASAAFLNGVPTQAALGFANSLGINIEDLQI--RKTEKGEFVFGTKI 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + L I+P I+ + P+ M+W +F + RP++ I+ + E Sbjct: 119 EKGESTKSALSLIIPKLIKNLQGPRFMKWG-----YGSFKFSRPIRWIVSLYDDEILDFA 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + D I GN + GHR I++QS +Y + E+ V ++ E R+ I N ++ Sbjct: 174 FDECD-PRIKIGNKSNGHR-LINKVIEIQSSYNYFGLMAESGVFVNREERKEKIDNLINQ 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + L+ + LL E+ LVE + +FDK++L LP E++ +K +Q+ Sbjct: 232 ESQLLKLDPSLSESLLNELTDLVESPNLITCNFDKQFLNLPVEVLSTVMKNHQRYIPLLK 291 Query: 295 REGV----------LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 + + + V + + I +GN +V+ AR DA F + D+ Sbjct: 292 KNKKFSKLGLSSEEIISTKFFVLSNGLKESNNTIAKGNEKVLRARFSDARFFVESDKKVA 351 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 N+ R +L V + +G +RV RI+ +KI + Sbjct: 352 SNV--------------------RNEKLK--SVSYLKGMGNVFQRVKRIQATSEKILNYL 389 Query: 405 D---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + D + A K DLC+EIV EFPELQG +G +Y + + C A+ EH P Sbjct: 390 NDQSLDSNKIIEAAKYCKNDLCSEIVYEFPELQGIMGGKYLRNEGFSKEICIAVAEHYLP 449 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R +++P+ K VS++DK++TLI+ + ++PSGS DPYALRR G+I II + ++ Sbjct: 450 RFYKDDLPSTKYGAIVSISDKIETLISIFISGKRPSGSSDPYALRRNLNGVILIIWQFEL 509 Query: 522 DIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 DI + + +LI F + R+ +L + I D+I+A Sbjct: 510 DIAIENIFRELIEYWEISLPNLKFEKEKVLTDLIEFSNQRIASHLDELSISKDVIKATCF 569 Query: 562 PEND------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE-- 613 ++ N+L + I + + A + R+ ++ K + + Sbjct: 570 TDSSVETRIVNILDLKKRINTIKQLKEKANFSEIQKVISRVCKLAESGNLKRSIFASKDY 629 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ---VLV 670 ++P E E +++ I + I + Y ++ +L + + FD VL+ Sbjct: 630 VNPNLFEKECETKVFQFIKEIEVFISS--TNWDYFELFNLFENNTNNLNELFDNDKGVLI 687 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D E+++NRL+LL I+N L + + K+ Sbjct: 688 MSEDPEIKNNRLNLLGLIRNYSLKIADFTKL 718 >gi|217076748|ref|YP_002334464.1| glycyl-tRNA synthetase, beta subunit [Thermosipho africanus TCF52B] gi|217036601|gb|ACJ75123.1| glycyl-tRNA synthetase, beta subunit [Thermosipho africanus TCF52B] Length = 637 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 183/692 (26%), Positives = 316/692 (45%), Gaps = 81/692 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +++ EI EE+P L+ + LL EEG+ Y ++ ++ P R Y+K L Sbjct: 1 MAEYIFEIGVEELPTTEVENILVQLNEKISKLLDEEGLSYGELKVFYAPRRFGFYIKDLD 60 Query: 61 PHSPEKIEERLGPRVG-------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 +KI ++ GP V +A++GFL+S G K + Sbjct: 61 EKQGDKIVQKRGPSVNIAYDKNKQPTRALEGFLKSNGASLEDIVI------KDNYVYIEK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + + +LK +P I K+ + K MRW +S++R IL + Sbjct: 115 KIEGKSSDVILKENIPSIISKLSFRKPMRWGN-----GTYSFVRIPHWILSLYNG----- 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K++D ++ ++ N T+GHRF PI++ +D Y + L++ V+ + R+ + N Sbjct: 165 KVLDFEIFDLKADNKTFGHRFVKDEPIEISGIDDYFKKLKDTNVIALHDERKKVVENILS 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +++D+DL++E++ L E+ QV GSF K+YL LPEELI TIK +Q+ F Sbjct: 225 ------NYSVLKDEDLIDEVVTLCEYPQVVEGSFSKEYLKLPEELITTTIKHHQRSFTVY 278 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 E + N F+ + + I +G +VV ARLEDA +++++D Sbjct: 279 EGE-KITNKFLSFID-SPTGNIEIIKKGYEKVVNARLEDARYYYEKD------------- 323 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVAL 410 L PL++ L D++F +GT ++V RI + +K+ + D Sbjct: 324 -------LKIPLEKFNESLK--DIIFQKDLGTLMDKVERIEKISEKLCDDLSIGYSDKVR 374 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + R L KAD+ + +V EFPELQG +G+ YA+ E+ IEEH K +VP Sbjct: 375 ILRIAHLCKADIASNVVYEFPELQGTMGRIYALKDGEDYKVAIGIEEHYK------DVPE 428 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + V++AD++DT++ + + P+GSKDP+ LR+ T I II++ +I L + Sbjct: 429 SLTGAVVAIADRIDTIVGNFLVGNIPTGSKDPFGLRKKTDTIFEIIVKYSFNIDLENLSK 488 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 L+ FF R +L+ ++ R+D+ A+ + L + + L Sbjct: 489 FAASLFSKDIPNELVEFFETRYELFN--QNTRYDIARAV-KRFWKKPLYGRLVAESLINI 545 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + L +R+ I + + S E L +AEK L+ + I E Sbjct: 546 VEQEEFQHLLTGFERVHNISSKFD------SYEFDSTKFLDDAEKELFNKYIEQKPKILE 599 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNV 672 ++D+ L + I+ +FD V V Sbjct: 600 AIDNLNIDIALKYLIELRPYIDNYFDNVFVMT 631 >gi|254991890|ref|ZP_05274080.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL J2-064] Length = 575 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 173/612 (28%), Positives = 295/612 (48%), Gaps = 67/612 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + ++ K + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVAPED--LTFREIKGVEYIYIK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +L + + + + +P SM W + +IRP+K ++ + Sbjct: 119 KEVIGEKTTALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF + Y L E V+++ R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLG-KTATINQPSDYPNALLEQFVVVNASERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEGELLPHFVTVRNG-NHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P ++P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + + Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIAPTGSADPFGLRRSAFGAVRIIQANGWDIPMLEVV 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGATELPSSDVIKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNMIPQL 563 Query: 571 VDLIKHLNEFFS 582 +D + LN+ Sbjct: 564 IDRAQILNKHAD 575 >gi|71891813|ref|YP_277542.1| glycine-tRNA synthetase, beta subunit [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795919|gb|AAZ40670.1| glycine-tRNA synthetase, beta subunit [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 695 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 195/748 (26%), Positives = 331/748 (44%), Gaps = 108/748 (14%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +E +P+++ K +D +I K+ +Y + + + RL + L Sbjct: 5 TFLVEIGTESLPSKILKKLGKDFFYQIISGFKKNNFVYDKVNWFASSCRLAVKA-NLIIK 63 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKK----------------- 105 S F +T + + K Sbjct: 64 SD--------------------F--NTNIACVDQSDTGDTYDKYINNTDTQINHIVNNIN 101 Query: 106 ---GDVYLAVLRKPK--------RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFS 154 G V R + + ++ +L I+ A++K+ + MRWS P Sbjct: 102 IRSGVCVNNVQRTLECDTNIVIHKNLKYLLCKIISSALEKLNNYEMMRWSDIDIP----- 156 Query: 155 WIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE 214 +IRP++++ +L +I + + YG+R I ++ DHY L + Sbjct: 157 FIRPVRTVTILL-----DTYLIPGYFFGMKTDRVLYGNRCMEDDKITLEHADHYPDVLIK 211 Query: 215 AM-VLLDPECRRNAILNDAHRLASAVGLELVEDKD--LLEEIIGLVEWVQVFMGSFDKKY 271 V+ D + R+N I ++ + A +G + + LLEE+ LVEW + G F+ K+ Sbjct: 212 NGWVIADYDIRKNIICSEIEKEARKLGGVVDVQDEKILLEEVTSLVEWPVILSGQFNNKF 271 Query: 272 LCLPEELIRLTIKTNQKCFVTRT-REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARL 330 L LP E+I +K +QK F +GVL FI VSN SD I+ G+ V+ RL Sbjct: 272 LVLPREVILHIMKYDQKYFPVYNVIDGVLLPYFIFVSNT-ISDNYKKIIAGHENVIIPRL 330 Query: 331 EDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERV 390 DA F +D L+ + +L+ V+FH+++GT ++ Sbjct: 331 MDAEFFLMQDN--------------------KCRLEDYIPKLN--SVLFHSRLGTLRDKS 368 Query: 391 SRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENIS 450 RI L IA+ I D+ RA L K DL + +V EFP QG IG YA+ E+ Sbjct: 369 WRIAELSGWIAEKIGIDIEQTKRAGYLCKCDLMSNMVFEFPSAQGTIGMHYALRDGESEE 428 Query: 451 CCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATL 510 A +EH +PR + +PT IS VS+ADK+DT+ + + E P G++DP+AL+R+ + Sbjct: 429 IALAQKEHYQPRFSKDTLPTTHISCAVSIADKMDTISGIFGVKELPKGNRDPFALKRSAI 488 Query: 511 GIIRIILENKIDIPLSQFIED---------------QNLILFFHDRLKLYLHDRDIRHDL 555 GI+RI++ K+ I L I+ ++ F ++RL + R + D+ Sbjct: 489 GILRILMYKKLPINLFDLIQKSVKLYGSQLINTTVINDIHHFMYNRLLSWYSSRGYKLDV 548 Query: 556 IEAILRPENDNLLTIVDLIKHLNEF--FSSAKGEKFLLSAKRIFQILAIEEKKNREISLE 613 I+A+L ++D+++ I I+ + +F + K L KRI IL K + + Sbjct: 549 IKAVLSVKSDSVVDIDARIRAVTDFFGLQKEENVKVNLIYKRISNIL---LKNKISCNED 605 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 + L + E L + +Q H RY+ + +I + FFD V++ + Sbjct: 606 VQHFLLKIPEEICLAMEVILIEKRLQVLCMHHRYYDALTIAITITSAVNAFFDNVIIMDE 665 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKI 701 + +VR NRL+LL +KN+ L V ++ + Sbjct: 666 NEDVRINRLTLLNKVKNLFLRVADISLL 693 >gi|58696740|ref|ZP_00372283.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila simulans] gi|225629952|ref|YP_002726743.1| glycyl-tRNA synthetase, beta subunit [Wolbachia sp. wRi] gi|58537077|gb|EAL60201.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila simulans] gi|225591933|gb|ACN94952.1| glycyl-tRNA synthetase, beta subunit [Wolbachia sp. wRi] Length = 705 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 222/734 (30%), Positives = 349/734 (47%), Gaps = 73/734 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M L E SEEIP RMQ+ A + + + + V + +M + T R+ L++ + Sbjct: 1 MSLQLLFECLSEEIPPRMQNSATVQVKSCIANVFNKNNVKFTSMEVFITARRITLFVDNI 60 Query: 60 -SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 + + E GP + A K AI+GFLR Q + + + D Y Sbjct: 61 NALELKDSNNEVKGPNINAPKSAIEGFLRKY--QKNEEDLLVRKVNNEDFYFIKRESCSF 118 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 I + LK + ++ W KSMRW W+RP+K+ILCIL ++II + Sbjct: 119 NIREFLKNQLEEMLKNFSWLKSMRWGEGKE-----RWVRPIKNILCIL-----NDEIIPV 168 Query: 179 DLKEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 I N TYGHRF + + V++ Y LE+ V+L + R+ IL+ ++ Sbjct: 169 SFAGITASNTTYGHRFLSSGTALTVKAPKDYFELLEKNSVILQMDKRKQFILDQINKFTK 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKK-YLCLPEELIRLTIKTNQKCFVTRTRE 296 L+L ++ LL E+ GL+EW V G +++ LP+E+I + T QK Sbjct: 229 EQNLQLEKNDYLLNELTGLIEWPIVLFGEVNQEKSFGLPKEVILSIVNTQQKYLAL--SN 286 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G + F + +V+G+ R++ ARL DA +D+ Sbjct: 287 GKRISHF----VTVVNVNNGEVVKGHERILEARLADAQFLISQDK--------------- 327 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAI 415 + LD + +L ++FHA +G+ GE+V RI L K IA I A + V+RA Sbjct: 328 -----KENLDYYVKKLG--SILFHASLGSVGEKVKRITALSKYIAIFIPHASLIKVERAA 380 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL T IVREFPELQG +G YA E+ +AI EH KP GP + P + +I Sbjct: 381 YLAKADLATSIVREFPELQGVMGGYYASYFQEDREIVEAITEHYKPIGPEQECPKSPSAI 440 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 VS+ADK+D+L+ A EK SGS D + LRR T+GIIR ILEN + IP+ I+ Sbjct: 441 AVSIADKVDSLVGLIAAGEKISGSYDQFGLRRMTIGIIRTILENNLHIPIRLMIDKSVSL 500 Query: 532 ----------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLL 568 + + F +R K+ L +RDIR D++++IL + ++LL Sbjct: 501 YSRLLFNKNTTSVDKPNRKQISELVFRFCLERFKVILKNRDIRQDIVDSILYKIGINDLL 560 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE-ISLEISPQYLLLEAEKRL 627 T L+ + S +GE+ L + KR+ +++ K + S ++L+ E L Sbjct: 561 TAEKQTVILDRYLSMPEGEQILSTYKRVSNMMSKVRKSDGTTYSASYGKRFLIENEEIAL 620 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 +I++++ + ++ D L I F D V +N D ++R NRLSLL+ Sbjct: 621 SNCAITACKNIKQAIKNNHFNAALDELAGFAPFINQFMDSVKINCDSDKLRRNRLSLLEN 680 Query: 688 IKNIILIVINVQKI 701 + +I +V + I Sbjct: 681 VVSIFHLVADFNLI 694 >gi|224437212|ref|ZP_03658193.1| glycyl-tRNA synthetase subunit beta [Helicobacter cinaedi CCUG 18818] gi|313143677|ref|ZP_07805870.1| glycyl-tRNA synthetase beta chain protein [Helicobacter cinaedi CCUG 18818] gi|313128708|gb|EFR46325.1| glycyl-tRNA synthetase beta chain protein [Helicobacter cinaedi CCUG 18818] Length = 696 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 198/722 (27%), Positives = 326/722 (45%), Gaps = 58/722 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +EE+PA K + + K+ V Y+TP RL LY +G H+ Sbjct: 7 LLIEILTEELPALPLLKELPHIIQKWQSIAKKHNVS-STPTLYYTPRRLVLYEEGFLAHT 65 Query: 64 PEKIEERLGPRVGAG----------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+ + E GP + KA + F + L + + + K +V + Sbjct: 66 PDSLIESYGPPLSIAYIDGDKTKGLSKAGESFYKKNNLPLEQELETRIKDNK-EVLYYAI 124 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +L+++V + + + KSM W +IRP+++IL +L + Sbjct: 125 TQKGVETSSLLESMVVEWLHSLQFGKSMFWGDVEQG-----FIRPVRNILILLGEQSI-- 177 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + + HR + P K+ S++ Y L++ V+L + R+ IL+ Sbjct: 178 -CVNAFNRHFGKQAQIFVHRDVSFEPFKITSIEQYFDTLQKNFVILSQDKRKELILSQIA 236 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L SA +++ D DLL EI+ + E+ Q GSFD +L LP E+I ++K NQ+ F T Sbjct: 237 ELESAHKIQVEIDTDLLNEIVAITEYPQAAYGSFDSSFLALPSEVIITSMKENQRYFATY 296 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++ VL N F+LVSN A D + IVQGN +V+ ARL DA+ F++ D L++ Sbjct: 297 -KDSVLHNGFVLVSNSTAKD-LSPIVQGNQKVLKARLADAMFFYENDLKKGFTPELLEQI 354 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 NL L + R L + + + ++I Sbjct: 355 VFVENLG---SLLDKSKRESALANALLESFAPALDSIDMPKDEARQILTQ---------- 401 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +KADL TE+V EF ELQG +G YA + AI+E P G +P++ + Sbjct: 402 ATKYAKADLLTEMVYEFTELQGVMGYYYAKNFCFHPLVALAIKEQYLPTGEDSALPSHIL 461 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------- 526 S ++L+ KLD + ++I++ PSGSKDP+ALRRA G+I+II +D L Sbjct: 462 SAILALSIKLDNIFALFSIDKIPSGSKDPFALRRAANGVIKIINHYDLDFDLLSDMPRLY 521 Query: 527 -----QFIEDQNLILFFHDRLKLYLH--DRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + + + FF +RL+ L IR L + NL I+ K LN Sbjct: 522 QAGGYKISDMKRIEQFFIERLEGALKINPSIIRSVLKARVNNKRVLNLKNIIRNTKALNA 581 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 FF + + + KR+ IL+ E K I L L E L+ + + Sbjct: 582 FFEKSDKQALVSLFKRVANILSDEIK-----PTHIDESLLKLPQEIALFQALKSLKSQAL 636 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + L S+ EP+E FF+ VLVN ++ ++ NR L+ + + L + +++ Sbjct: 637 TA----DVDSQITALFSLKEPLEAFFNSVLVNDENNAIKTNRQMLVFSVHSEFLRIGDMR 692 Query: 700 KI 701 +I Sbjct: 693 EI 694 >gi|42520058|ref|NP_965973.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409795|gb|AAS13907.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila melanogaster] Length = 705 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 220/734 (29%), Positives = 351/734 (47%), Gaps = 73/734 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M L E SEEIP RMQ+ A + + + + V + +M + T R+ L++ + Sbjct: 1 MSLQLLFECLSEEIPPRMQNVVATQVKSCIANVFNKNNVKFTSMEVFITARRITLFVDNI 60 Query: 60 -SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 + + E GP + A K AI+GFLR Q + + + D Y Sbjct: 61 NALELKDSNNEVKGPNINAPKSAIEGFLRKY--QKNEEDLLVRKVNNEDFYFIKRESCSF 118 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 I + LK + ++ W KSMRW W+RP+K+ILCIL ++II + Sbjct: 119 NIREFLKNQLEEMLKNFSWLKSMRWGEGKE-----RWVRPIKNILCIL-----NDEIIPV 168 Query: 179 DLKEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 I N TYGHRF + + V++ Y LE+ V+L + R+ IL+ ++ Sbjct: 169 SFAGITASNTTYGHRFLSSGTALTVKAPKDYFELLEKNSVILQMDKRKQFILDQINKFTK 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKK-YLCLPEELIRLTIKTNQKCFVTRTRE 296 L+L ++ LL E+ GL+EW V G +++ LP+E+I + T QK Sbjct: 229 EQNLQLEKNDYLLNELTGLIEWPIVLFGEVNQEKSFGLPKEVILSIVNTQQKYLAL--SN 286 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G + F + +V+G+ R++ ARL DA +D+ Sbjct: 287 GKRISHF----VTVVNVNNGEVVKGHERILEARLADAQFLISQDK--------------- 327 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAI 415 + LD + +L ++FHA +G+ GE+V RI L K IA I A + V+ A Sbjct: 328 -----KENLDYYVKKLG--SILFHASLGSVGEKVKRITALSKYIAIFIPHASLIKVECAA 380 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL T IVREFPELQG +G YA E+ +AI EH KP GP + P + +I Sbjct: 381 YLAKADLATSIVREFPELQGVMGGYYASYFQEDKEVVEAITEHYKPIGPEQECPKSPSAI 440 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 VS+ADK+D+L+ A EK SGS D + LRR T+GIIR ILEN + +P+ I+ Sbjct: 441 AVSIADKVDSLVGLIAAGEKISGSYDQFGLRRMTIGIIRTILENNLHVPIRLMIDKSVSL 500 Query: 532 ----------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLL 568 + + F +R K+ L +RDIR D++++IL + + ++LL Sbjct: 501 YSRLLFNKNTASVDKPNRKQISELVFRFCLERFKVILKNRDIRQDVVDSILYKIDINDLL 560 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRL 627 T L+ + S+ +GE+ L + KR+ +++ K + S ++L+ E L Sbjct: 561 TAEKRTVILDRYLSTPEGEQILSTYKRVSNMMSKARKSDGTTYSASYGKRFLIESEEIAL 620 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 +I++++ + ++ D L S I F D + +N D ++R NRLSLL+ Sbjct: 621 SNCAITACKNIKQAIKNNHFNVALDELASFAPFINKFMDSIKINCDSDKLRRNRLSLLEN 680 Query: 688 IKNIILIVINVQKI 701 + +I +V + I Sbjct: 681 VVSIFHLVADFNLI 694 >gi|190571503|ref|YP_001975861.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018906|ref|ZP_03334714.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357775|emb|CAQ55229.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995857|gb|EEB56497.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 702 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 217/731 (29%), Positives = 346/731 (47%), Gaps = 73/731 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 L E SEEIP+RMQ+ +A + + + V + ++ Y T R+ L++ G+S Sbjct: 3 SQLLFECLSEEIPSRMQNSSAAQVKSYITNAFSKNNVKFASIEVYVTARRIALFIDGISA 62 Query: 62 -HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + E GPRV A K AI+GFLR + + + + D Y I Sbjct: 63 LELKDSNNEIKGPRVNAPKSAIEGFLRKN--RKGEEDLLIRKVNDEDFYFIKRESCLFNI 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 LK + ++ WPKSMRWS W+RP+K+ILCIL ++II + Sbjct: 121 NGFLKNQLEEMLKNFSWPKSMRWSERKE-----RWVRPIKNILCIL-----NDEIIPISF 170 Query: 181 KEIPCGNITYGHRFHAPHPI-KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + + V++ Y LE+ V+L + R+ IL+ ++ Sbjct: 171 AGVTACNVTYGHRFLSGDAVLTVKTPKDYFELLEKNNVILQLDKRKQFILDQINKFTKEE 230 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 L+L ++ LL E+ GL+EW V G LP+++I I T QK +G Sbjct: 231 NLQLEKNDYLLNELAGLIEWPIVLFGKVKSS--ELPKKVILSIINTQQKYLAL--SDGQK 286 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 + F + +V+G+ R++ ARL DA +D+ Sbjct: 287 ISHF----VTVVNVNNNEVVKGHERILEARLADAQFLISQDK------------------ 324 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVLS 418 + LD + +L + FHA +G+ E+V RI L K IA I A + V+RA L+ Sbjct: 325 --KENLDYYVKKLS--SISFHASLGSVEEKVKRIIALSKYIAIFIPHASLIKVERAAYLA 380 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T IV+EFP LQG + YA E+ +AI EH KP G + P + +I V+ Sbjct: 381 KADLATLIVKEFPGLQGVMSGYYASYFQEDKEVVEAITEHYKPIGSDQECPRSPTAIAVA 440 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 +ADK+D+L+ A EK SGS D + LRR T+GIIR ILEN + IP+ I+ Sbjct: 441 IADKMDSLVGLIAAGEKISGSYDQFGLRRMTIGIIRTILENNLHIPIRLLIDKSVSLCSR 500 Query: 532 -------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTIV 571 + + F +R K+ L +R+IR D++++IL + + ++LL Sbjct: 501 LLLNKNITPVDKPSEKQILELVFKFCLERFKIILKNRNIRQDVVDSILYKVDINDLLKAE 560 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAV 630 L+ + S+ +GE+ L + KR +++ K + + S ++L+ + E L Sbjct: 561 KQTVILDRYLSTKEGEQVLSTYKRASNMMSKVRKSDGTTYNASYSKKFLIEDEEIALSNC 620 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 +I++++++ ++ D L I F D V +N D E+R NRLSLL + + Sbjct: 621 AIAACKNIKQAIENNDFNTALDELARFAPFINQFMDSVKINCDSNELRINRLSLLANVVS 680 Query: 691 IILIVINVQKI 701 +V I Sbjct: 681 TFHLVAEFNLI 691 >gi|302837349|ref|XP_002950234.1| hypothetical protein VOLCADRAFT_59982 [Volvox carteri f. nagariensis] gi|300264707|gb|EFJ48902.1| hypothetical protein VOLCADRAFT_59982 [Volvox carteri f. nagariensis] Length = 1069 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 167/715 (23%), Positives = 287/715 (40%), Gaps = 68/715 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F+LEI +EE+P A L + LL + + + ++ TP RL + ++GL+ Sbjct: 361 FVLEIGTEELPPDDVVSALNQLRERVPALLSKLRLTHGSVHVEGTPRRLAVVVEGLAARQ 420 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + GP G+ KA++GF R G+ S + + D K + AV+R Sbjct: 421 ASEEAKVRGPPAKQAFSADGSPTKALEGFCRKNGVDVGSVTR-EADAKGVEYVYAVVRDA 479 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +VL +P + + + KSMRW S+ RP++ +L + + ++ Sbjct: 480 GRDAVEVLTDELPGLVGSLSFKKSMRW-----NGHGASFSRPMRWLLAL-----HGDVVL 529 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + T R + V S + Y+ L A + L R AI D A Sbjct: 530 PFVYGGLQAARTTRVLRNSPAPELVVSSAETYLPALATAGIALSGSDRAEAIWRDVEAAA 589 Query: 237 SAVGLELVEDKDLLEEIIGLVEWV-----------QVFMGSFDKKYLCLPEELIRLTIKT 285 + VG GL F G E++ + ++ Sbjct: 590 ANVGRCPPILSPPSSPPCGLCNSTSPPFPPLPLPGHTFTGGTQHNTTQHDSEVLVMVMRK 649 Query: 286 NQKCFVTRTREGV-LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 +Q+ F +G L FI V+N A + GN V+ AR EDA F++ D Sbjct: 650 HQRYFPVFAPDGKSLLPYFITVANGPVD--PAVVAAGNEAVLRARFEDATFFYREDLKQP 707 Query: 345 PNLSSLKESALKFNLDLSKPLDQ--RMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 K S F DL LD+ R+ RL +G V+ R + Sbjct: 708 LEAFRPKLSGTTFQKDLGSLLDKALRLERL----------VGPLAAAVAAARPGQAAWGE 757 Query: 403 LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNE---NISCCDAIEEHL 459 +V A L KADL T V E L G +G+ YA Q + + +AI E Sbjct: 758 AGVLEV--AVEAARLCKADLATSTVTEMTALAGTMGRHYAYKQASCGLSAAVAEAIFEAA 815 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 PR + +P + + V+ AD+LD+L+ +A P+ + DPY LRRA G+++ ++ N Sbjct: 816 LPRQAGDLLPASPAGVLVAAADRLDSLVGLFAAGCAPTAAADPYGLRRAAYGMLQTLVTN 875 Query: 520 KIDIPLSQFIE--------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 + + L + +++ + + RL+ L D +++ A+L D Sbjct: 876 NVGVSLRAAVAAAAALQPIAVSDAVQSDVLSYVNGRLEQLLGDGGAPAEVVRAVLGERGD 935 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 + ++ L + + + + + R +I+ K+ + S+ + P E E+ Sbjct: 936 DPALAAKTVEELKVWLRAGSLRRVMAAFSRPTRIVR--GKEVPDASVAVDPAVFEGEEER 993 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 +LYA +D + ++ + + L I+ FFD+V V +D VR N Sbjct: 994 QLYAAYTDARAKMSPAVSVSEWLAAVEPLL---PAIDRFFDKVFVMCEDAAVRAN 1045 >gi|111073620|emb|CAL29483.1| Glycyl-tRNA synthetase, beta chain [Wolbachia endosymbiont of Onchocerca volvulus] Length = 701 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 213/735 (28%), Positives = 348/735 (47%), Gaps = 75/735 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 L E SEEIP+RMQ A + + + V + ++ + T R+ L++ ++ Sbjct: 3 SQLLFECLSEEIPSRMQSLAVAQVKSYITNAFNKNNVKFASIEVFVTARRIALFVSDINI 62 Query: 62 HSPEKIEERL-GPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + ++ GP V A + AI+GFL+ + G+ Y I Sbjct: 63 SELKGSNNKISGPNVSAPESAIEGFLKKYQKDRKDLLI--RKVNDGEFYFIKRESSSFNI 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ LK + ++ WPKSMRWS W+RP+K+ILCIL ++II + Sbjct: 121 KEFLKNQLEKMLKDFSWPKSMRWSKGKE-----RWVRPIKNILCIL-----NDEIIPVFF 170 Query: 181 KEIPCGNITYGHRFHAPHPI-KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I N TYGHRF + + V+ Y L++ V+L + R+ IL+ ++ Sbjct: 171 AGITACNTTYGHRFLSGGAMLTVKVPKDYFELLKKNNVILQQDKRKQFILDQINKFIKEQ 230 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKK-YLCLPEELIRLTIKTNQKCFVTRTREGV 298 L+L E+ LL+E+ GL+EW V G + + LP+E I I T QKC G Sbjct: 231 NLQLEENNYLLDELTGLIEWPVVLFGKVNHEKSFGLPKEAILSIINTQQKCLAL--SNGK 288 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 + F V N+ + + +++G+ R++ ARL DA +D+ Sbjct: 289 RISHFATVVNVSSDE----VIKGHERILEARLADAQFLMSQDR----------------- 327 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVL 417 + LD + +LD ++ HA +G GE+V RI VL K IA + A + V+ A L Sbjct: 328 ---KENLDYYVRKLD--SILSHAYLGNVGEKVRRIMVLSKYIAMYVPHASLTKVEHAAYL 382 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL T +VREFPELQG +G YA E+ +AI EH KP P + P + +I V Sbjct: 383 AKADLATSMVREFPELQGIMGGYYASYFQEDKEIVEAITEHYKPVRPEQECPRSPTAIVV 442 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------ 531 ++ADK+D+L+ A EK SGS D + LRR +GIIR ILEN + IP+ I+ Sbjct: 443 AIADKVDSLVGLIAAGEKISGSYDQFGLRRTAIGIIRTILENNLHIPIRLLIDKSVSLYL 502 Query: 532 -----------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNL 567 + ++ F R ++ L ++ +R D+I++IL + + D+L Sbjct: 503 EFVFAGDAASVGQPNKLNREQILELVLKFCLKRFRVILKNKGVRQDVIDSILYKTDIDDL 562 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS-LEISPQYLLLEAEKR 626 LT L+ + S+ KGE+ L + +R+ I++ +K + + ++L+ E Sbjct: 563 LTAEKQTIILDCYLSTPKGEQILNTYRRVSNIVSKAKKNDNTTYIASYNQEFLIDNKEIA 622 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L + I++++ + + D L+ I F D V +N ++R+NR SLL Sbjct: 623 LSNCVVAVYERIKQAIKNDHFSAALDELNRFLPLINQFMDNVKINCAYDKLRENRFSLLA 682 Query: 687 YIKNIILIVINVQKI 701 + +I V + I Sbjct: 683 SVISIFHSVACFKLI 697 >gi|159488996|ref|XP_001702483.1| predicted protein [Chlamydomonas reinhardtii] gi|158280505|gb|EDP06262.1| predicted protein [Chlamydomonas reinhardtii] Length = 1097 Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats. Identities = 175/707 (24%), Positives = 304/707 (42%), Gaps = 66/707 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 F+LE+ EE+P A L + LL + + + + TP RL + ++ L+ Sbjct: 404 TFVLEVGGEELPPDDVVSAVHQLRERVPALLAKLRLSHGAVHVEGTPRRLAVVVEALAAA 463 Query: 63 SPEKIEERLGPRVGA--------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + GP KA++GF R G++ + + + DPK + AV++ Sbjct: 464 QTSEESKVRGPPAKQAFAADGVTPTKALEGFCRKNGVEAGAVFK-EADPKGVEYVWAVVK 522 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +VL +P + + + KSMRWS S ++ RPL+ +L + + Sbjct: 523 DAGRPAVEVLTDELPALVGGLSFKKSMRWSPGTGAASP-AFSRPLRWLLAL-----HGDT 576 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + G T R A + V S + Y+ L A + L R AI D Sbjct: 577 VLPFVYGTLQAGATTRVLRNAASPTLPVPSAEAYLPALAAAGISLPGAGRAEAIWRDVTA 636 Query: 235 LASAVGLELVEDK--DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A+ VG + + DLLEE+ LVE V MGSF +L LP E++ + ++ +Q+ F Sbjct: 637 AAARVGGVVPDSTRGDLLEEVTNLVEAPSVVMGSFSPDFLALPSEVLVMVMRKHQRYFPV 696 Query: 293 RTREGV-LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 T +G L FI V+N A + GN V+ AR EDA F++ D Sbjct: 697 FTADGKSLLPHFITVANGPID--PAVVAAGNEAVLRARFEDAAFFYRED----------- 743 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL- 410 L +PL +L F ++G+ + R+ L +A Sbjct: 744 ---------LKQPLQDFRPKLS--GTTFQKELGSLLAKSDRVEQLVPALAAAAAWASPAV 792 Query: 411 ---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 +A L KADL T V E L G +G+ YA Q + +A+ E PR + Sbjct: 793 LEVAVQAAHLCKADLATSTVTEMTALAGTMGRHYAAKQGLPAAVSEAVFEACLPRQAGDL 852 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS- 526 +P++ + V++AD+LD+L+ +A PS + DP+ALRRA G+++ ++ NK+ + L Sbjct: 853 LPSSPAGVLVAVADRLDSLVGLFAAGCAPSAATDPFALRRAAYGMLQTLVANKVSVSLKA 912 Query: 527 -------------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 +++ + R++ L D +++ A L D+ + Sbjct: 913 AVAAAAALQPIPVSAQVQSDVLAYLGGRMEQLLGDGGAGAEVVRAALAERGDDPALVAAT 972 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ L + K + + R +I+ K+ S+ ++ + E E+ L+A S+ Sbjct: 973 VEQLKA-GEGGRLRKVMAAFSRPTRIVR--GKEVPPASVAVAQELFEGEEERALFAAYSE 1029 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 + + + + L S PI+ FF++V V +D+ VR N Sbjct: 1030 ARAKVTSASTVSEWLAAAEPLLS---PIDKFFEKVFVMCEDQAVRAN 1073 >gi|299783170|gb|ADJ41168.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Lactobacillus fermentum CECT 5716] Length = 600 Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 175/599 (29%), Positives = 285/599 (47%), Gaps = 70/599 (11%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +LLE+ EE+PA + + + L + L EE + +++++ Y TP RL L + GL Sbjct: 1 MAHSYLLEVGLEEMPAHVVTPSIQQLKTRVANYLTEERIDFEDIQAYSTPRRLALLISGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ E GP G KA GF R G I+ KG Y+ V Sbjct: 61 ADKQPDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQGATVDD---IEFKEVKGVEYVYV 117 Query: 113 -LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +++VL + I + +P MRW + ++IRP+ ++ +L Sbjct: 118 EKHIQGKPVDEVLAG-LNDVITAMNFPTLMRWGSFK-----LNFIRPIHWLVSLL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ D+ + G +T GHRF ++++S Y+ L++ V++D R+ I + Sbjct: 167 DDQVVPFDILNVTAGRLTRGHRFLGHD-VEIKSATDYVAALKDDFVIVDAAERKATIKDQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + D++LLEE+ LVEW F G+FD+KYL LPE ++ ++K NQ+ F Sbjct: 226 IQAIVDQHNWVIDWDEELLEEVNNLVEWPTAFAGTFDQKYLELPEPVLITSMKDNQRFFC 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R +G L FI V N A ++GN RV+ RLEDA F+ DQ Sbjct: 286 VRDHDGKLQPAFISVRNGNAVHLDNV-IKGNERVLVPRLEDAKFFFDEDQ---------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DV 408 +DQ + RL +V FH +I + ++++R + L + Q + ++ Sbjct: 335 ----------KMTIDQYVDRLK--NVSFHDQISSMYDKMARTKALANLLGQQLGLSDQEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A + RA + K DL T++V EF ELQG +G+ YA EN + A+ EH P + Sbjct: 383 ADLARAASIYKFDLTTQMVGEFAELQGIMGEIYAKRFGENEAVAAAVREHYMPISADGAL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKLD++ +F+A++ PSGS DPYALRR GI+R++ + K + L F Sbjct: 443 PQTTVGAVLAIADKLDSIYSFFAVDMIPSGSNDPYALRRQAYGIVRMLADRKWHLNLLDF 502 Query: 529 IED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + FF DRLK +RHD+++A R D Sbjct: 503 QASAKQAVEQATPALGLDYAKNADAVTDFFIDRLKQLFSLDHLRHDIVDAGHRHPRDRP 561 >gi|255085132|ref|XP_002504997.1| predicted protein [Micromonas sp. RCC299] gi|226520266|gb|ACO66255.1| predicted protein [Micromonas sp. RCC299] Length = 1045 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 168/734 (22%), Positives = 302/734 (41%), Gaps = 81/734 (11%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFLLE+ +EE+P +E LS + L G+ + + TP R+ + +K L+ Sbjct: 356 ADFLLEVGTEELPPADVASGSEQLSKAIEACLDAAGLTHGGVVVGATPRRMVVKVKDLAA 415 Query: 62 HSPEKIEERLGPRVG--------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 K E GP + KA GF + G+ K G+ A + Sbjct: 416 AQESKQERNRGPPLSRAFEEDGVTPTKAAMGFAKKNGVDPADL------EKDGEYVWANV 469 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +V+ +P + + +PK+MRW+ ++ RPL+ +L + E Sbjct: 470 QTVGRAAHEVIADALPGIVGGINFPKTMRWN------GDAAFSRPLRWLLAM-----HGE 518 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + + G+ T R +V S H+ + LE + + + RR AI + A Sbjct: 519 YHLPFVALGVASGSTTRLLRNSPTPTAEVTSAAHHAQLLEGDTIEISFDARRAAIWSAAE 578 Query: 234 RLASAVGLELVEDKD----LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +LA+ V + L++E++ L+E +G FD +L LP+E++ + ++ +Q+ Sbjct: 579 KLAAGVNGVVPPTAGESGGLIDEVVNLIESPTPIIGGFDPAFLELPKEVLVMVMRKHQRY 638 Query: 290 FVTRT-REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI V+N + GN V+ AR EDA F++ D Sbjct: 639 FPVEDVATGDLLPHFITVANGSV--NPDVVRAGNESVLKARYEDAKFFYEADTR------ 690 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + L L + F ++GT E+ R+ L K+A + Sbjct: 691 --------------RKLADFKPDL--AGITFQTELGTMLEKTERVEKLAPKLATSLGFSE 734 Query: 409 ALVD---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 + A L++ADL T++V+EF L G +GK YA + + C+AI E PR Sbjct: 735 SDAKVATEAAALARADLATQLVQEFTSLAGVMGKHYAAREGLDAPLCEAIFEAALPRSSG 794 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P++ I V++AD+LDTL +A+ P + DP+ LRRA G ++ ++ + L Sbjct: 795 DILPSSPAGIAVAVADRLDTLAGLFAVVGAPKATADPFGLRRAAYGAVQALVASNSRCDL 854 Query: 526 SQFIED--------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + + + RL+ YL D + + A+L + Sbjct: 855 RAALAEAAALQPVECGDDVVDECLEYMTRRLEQYLVDSGCGVEAVRAVLAERGGDPAVAA 914 Query: 572 DLIKHLNEFF--SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L+ S + + + R +++ K LE+ + L+ E LY Sbjct: 915 VTARALDAAIVGGSEELKAAMTVLARPTRLVR---GKELPADLEVKKESLVDAEEVALYE 971 Query: 630 VISDFGTHIQESMDH--KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + L E FFD+V V ++ E+R NR++L+ Sbjct: 972 AYVAAREKVGVHSEATVGDLLSAAASLSEASE---AFFDKVYVMAEEPELRRNRMALMNA 1028 Query: 688 IKNIILIVINVQKI 701 I ++ +++ ++ Sbjct: 1029 IASLSEGIVDFTEL 1042 >gi|269123853|ref|YP_003306430.1| glycyl-tRNA synthetase, beta subunit [Streptobacillus moniliformis DSM 12112] gi|268315179|gb|ACZ01553.1| glycyl-tRNA synthetase, beta subunit [Streptobacillus moniliformis DSM 12112] Length = 668 Score = 448 bits (1153), Expect = e-123, Method: Composition-based stats. Identities = 189/719 (26%), Positives = 325/719 (45%), Gaps = 81/719 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL EI EE+P+R KA +DL I L E + + ++Y +P R+ +Y + ++ Sbjct: 3 FLFEIGVEELPSRYVDKACDDLLEIFKKELIEARIEFSGEKKYNSPRRIAIYFENIAKMQ 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E+++GP V G KA GFL S L + KG+ Sbjct: 63 KDLYEKKIGPSVQVAYKEGELTKAALGFLNSQNLTLSDLKI--EKTDKGEYIYVEKNIKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 VL ++ +AI+ + + K+M+WS +F + RP+K I+ L ++IID Sbjct: 121 IESFKVLPELMEMAIKSLDFDKTMKWSD-----KSFRFARPIKWIVATL-----DDEIID 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + I NI+ G R + + Y L V++D RR IL+ ++ Sbjct: 171 FTFEGITASNISRGMRLFGNQEVLISDSSKYEDILLNEYVVVDTLKRREMILDSINKNCE 230 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G ++ +K LL+E++ LVE+ G F+K YL LPE++I +T++T+Q+ F + EG Sbjct: 231 KDGDRVIVNKYLLDEVVNLVEYPYAIKGEFNKDYLELPEDIITITMETHQRYFPVKNSEG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F+L+ N A + + +GN +V+ RL DA F+ D Sbjct: 291 KLTNKFVLIRN--APEYSELVKKGNEKVIEPRLADAKFFFDED----------------- 331 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALVDRAIV 416 L L+ + +L +V F +GT E++ R + + K + ++ + + + I Sbjct: 332 ---LKINLNDNVEKLK--NVTFQKDMGTIFEKMERSQKIAKYLINKLNLENEEDILKTIY 386 Query: 417 LSKADLCTEIVR--EFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSKADL + ++ EF +LQG +G YA Q E I EH PR + +P Sbjct: 387 LSKADLVSNVINEKEFTKLQGFMGSIYAEKQGEKPEISKGIFEHYLPRFQGDILPETMEG 446 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 S++DKLDTL+ +++N P+ SKDPYALRRAT G++ ++I Sbjct: 447 TIASISDKLDTLVGTFSVNLIPTSSKDPYALRRATNGLLLTAFNKNLNIDYLDLINKAFE 506 Query: 529 -----------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +N++ F RL+ L + + A +++ I + + L Sbjct: 507 IFSEDKKILNDNAKENILDFIKQRLEAILAIDFSK--NLIAYQINNVTSIMDIKNRLIKL 564 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +E S E + KR+ I ++E+ ++ E EK LY + Sbjct: 565 SELEKSENFEILINLIKRLKNI-------SKEVVENVNINLFTNEEEKELYNLSQSLSGD 617 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + D+L + I FF++V++NV D +++NR++L+ + + + +I Sbjct: 618 FND----------IDMLIDKKDIINRFFEKVIINVKDEVIKNNRIALINEMLSKVNRLI 666 >gi|148284356|ref|YP_001248446.1| glycyl-tRNA synthetase subunit beta [Orientia tsutsugamushi str. Boryong] gi|146739795|emb|CAM79670.1| glycyl-tRNA synthetase beta chain [Orientia tsutsugamushi str. Boryong] Length = 683 Score = 448 bits (1152), Expect = e-123, Method: Composition-based stats. Identities = 210/713 (29%), Positives = 344/713 (48%), Gaps = 58/713 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LE+YSEEIPA+MQ KA I K + + +++ Y P R+ L+ S Sbjct: 6 LILELYSEEIPAKMQKKAELAFQEIFTKNFKLANISFNHLKVYIGPCRVVLHTVFSSKEL 65 Query: 64 PEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 K E GP+VGA K A++GF ++ +S K Y+ P + I+D+ Sbjct: 66 AAKAIEHKGPKVGAKKSAVEGFCKAK--SILSKDLTIKTFNNQQFYVYTHVTPTQPIKDL 123 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L I+ +I++ WPKSM+W +W+RPL++ILC+ E+ + + + Sbjct: 124 LPEIILNSIKEYTWPKSMKWGNYQ-----INWVRPLRNILCMFNGEE-----LKISWHHL 173 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 N ++GH+F +P+ V + Y +L + V+LD R+ ILN + +G+ L Sbjct: 174 TSNNKSFGHKFMSPNSFTVSTWKDYTNNLRDNFVILDRSERQAIILNSLEKTCQTLGITL 233 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCF 303 + LL+E+ GLVE+ V G+ ++L LPEE+I +++T+QK F T+ LA F Sbjct: 234 NYNNKLLDEVTGLVEYPIVLYGTIPNEFLSLPEEIIITSVQTHQKYFTTKDHSNKLAPYF 293 Query: 304 ILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSK 363 + V+NI D + I++GN +V+++RL DA++F+ +D K Sbjct: 294 LFVTNINTEDY-SNIIKGNEKVLSSRLTDAIYFFNQDCQLTLLSKLEKLKK--------- 343 Query: 364 PLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLC 423 VVFH KIG+ ++V RI+ + K+A D + A L K+DL Sbjct: 344 -------------VVFHTKIGSIFDKVQRIKKICHKLAP----DDQELAIAAELCKSDLV 386 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 +E+V+EFP LQG +GK YA+ + + + I H P + VP K + ++LADKL Sbjct: 387 SEVVQEFPNLQGIMGKYYALNDKLSPAVANIIGNHYYPTRIEDEVPNGK-AAILALADKL 445 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------------ 531 D L + + E+ + SKDP+ALRR I RIIL NKI + L + Sbjct: 446 DNLTSLYLAGERATSSKDPFALRRCAFSIARIILTNKIQVKLLDLLTFIYQLHDIYTNEL 505 Query: 532 -QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 ++LF D+ K L+ + + + D+L + + L+ F +S KG+ F+ Sbjct: 506 ATEVLLFIKDKTKNLLNAKFNHLLVEAIFQQNNYDDLTELELRMNILDHFLTSTKGQNFI 565 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY-AVISDFGTHIQESMDHKRYHQ 649 S KR + I+ EE + +I LL + E LY ++ + + + + Sbjct: 566 QSYKRAYNIIKDEEIRQAKIDGY----KLLTKQETILYQQAMNSKVSQLSTQFSAESFTL 621 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 D L ++ I F D V VN D+ + D R +LQY+ + K++ Sbjct: 622 ALDQLSNLSIQIAEFLDNVTVNTTDQYLTDTRKLILQYVVQFCNNIAPFDKVI 674 >gi|237751531|ref|ZP_04582011.1| glycyl-tRNA synthetase [Helicobacter bilis ATCC 43879] gi|229372897|gb|EEO23288.1| glycyl-tRNA synthetase [Helicobacter bilis ATCC 43879] Length = 692 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 181/728 (24%), Positives = 330/728 (45%), Gaps = 65/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + +EI++EE+PA K ++ +LK+ + ++TP RL K + Sbjct: 1 MAELFIEIFTEELPAIPLLKNLSNIKENWKKILKDSHLD-APFDFFYTPRRLSFIHKDFA 59 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+ + GP + KA+ FL+ + KD K +V Sbjct: 60 LKQPDTKTQSYGPPLAIAYDSSNNPTKAMQSFLQKNNITKDMVKTAIKDNK--EVLFYEK 117 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++L+++V + + + KSMRW S+IRP+++I +L Sbjct: 118 EVKGIESSNLLESMVITLLHSLHFGKSMRWGDCKD-----SFIRPIRNICIML-----DH 167 Query: 174 KIIDLDLKEIPCGNITYGHR-----FHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 K I + I N+ + HR S++ Y+ L + V+LD + R++ I Sbjct: 168 KNIPCNAYNIQGNNLIFAHRQAKDTNGEQKSHYATSIESYLDFLSQNGVILDQDKRKDLI 227 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L + L + +++ D DLL+EI+ + E+ +G FD+K+L +P+E+I ++K NQ+ Sbjct: 228 LQEIKELENKHNIKVEIDTDLLQEIVAITEYPHAMLGIFDEKFLKIPKEMIITSMKENQR 287 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F ++ L + F++VSN D + I +GN +V+ ARLEDA+ F+ +D ++ Sbjct: 288 YFAVY-KDSNLFHGFVVVSNSFGGDF-SLITKGNEKVLRARLEDAMFFYTQDIDSKMEFG 345 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 SL + ++ + L ++AR + A + T+ S + Sbjct: 346 SLNSISF---MEGAGSLADKIAREQNMANSLIALLNTKHIECSEN-------------EK 389 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 ALV +A+ +K DL ++ V EFPELQG +G +A C AI E P G + Sbjct: 390 ALVIQALKYAKCDLLSQSVGEFPELQGIMGSYFAKDCGMESEVCLAIREQYLPNGIQATL 449 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P++KIS V++A+KLDT+ + IN+ PSGSKDP+ALRR I++I + D+ + + Sbjct: 450 PSSKISALVNMANKLDTIFTLFNINKIPSGSKDPFALRRQATAILKIAHQFGFDLSIKEI 509 Query: 529 IEDQN----------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + LI F +R+ Y + ++ +L + D I L Sbjct: 510 CNLASKDYNNAKQNMLIDFMMERI--YGIFPGVNPSIVRCVLLMGFG-ITQSFDKILALA 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH- 637 +F S + + + KR+ IL N + ++ +E +LY + + Sbjct: 567 SYFESVDIKSVIGTFKRVANILDNA---NLTKDITLNTSLFEE-SETKLYNNLMAYTKSK 622 Query: 638 ----IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++D + Y + L ++ ++ FD VL+ D+ E++ NR+ L+ + + Sbjct: 623 KTEITNNTLDSESYLAQIESLFALKSDLDSVFDNVLIMTDNVELKQNRIGLITLVFKAFM 682 Query: 694 IVINVQKI 701 ++++I Sbjct: 683 EFGDMREI 690 >gi|189183850|ref|YP_001937635.1| glycyl-tRNA synthetase subunit beta [Orientia tsutsugamushi str. Ikeda] gi|189180621|dbj|BAG40401.1| glycyl-tRNA synthetase beta chain [Orientia tsutsugamushi str. Ikeda] Length = 683 Score = 445 bits (1145), Expect = e-122, Method: Composition-based stats. Identities = 209/713 (29%), Positives = 346/713 (48%), Gaps = 58/713 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LE+YSEEIPA+MQ KA I K + + +++ Y P R+ L+ S Sbjct: 6 LILELYSEEIPAKMQKKAELAFQEIFTKNFKLANISFNHLKVYIGPCRVVLHTVFSSKEL 65 Query: 64 PEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 K E GP+VGA K A++GF ++ +S K Y+ P + I+D+ Sbjct: 66 AAKAIEHKGPKVGAKKSAVEGFCKAK--SILSKDLTIKTFNNQQFYVYTHVTPTQPIKDL 123 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L I+ ++++ WPKSM+W +W+RPL++ILC+ E+ + + + Sbjct: 124 LPEIILNSVKEYTWPKSMKWENYQ-----INWVRPLRNILCMFNGEE-----LKISWHHL 173 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 N ++GH+F +P+ V + Y +L + V+LD R+ ILN + +G+ L Sbjct: 174 TSNNKSFGHKFMSPNSFTVSTWQDYTNNLRDNFVILDRSERQAIILNSLEKTCKTLGITL 233 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCF 303 + LL+E+ GLVE+ V G+ ++L LPEE+I +++T+QK F T+ LA F Sbjct: 234 NYNNKLLDEVTGLVEYPIVLYGTIPNEFLSLPEEIIITSVQTHQKYFTTKDHNNKLAPYF 293 Query: 304 ILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSK 363 + V+NI D + I++GN +V+++RL DA++F+ +D K Sbjct: 294 LFVTNINTEDY-SNIIKGNEKVLSSRLSDAIYFFNQDCQFTLLSKLEKLKK--------- 343 Query: 364 PLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLC 423 VVFH K+G+ ++V RI+ + K+A D + A L K+DL Sbjct: 344 -------------VVFHTKLGSIFDKVQRIKKICHKLAP----DDQELAIAAELCKSDLV 386 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 +E+V+EFP LQG +GK YA+ + + + I H P G + VP K + ++LADKL Sbjct: 387 SEVVQEFPNLQGIMGKYYALNDKLSPAVANIIGNHYHPTGIEDEVPNGK-AAILALADKL 445 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------------ 531 D L + + E+ + SKDP+ALRR I RIIL NKI + L + Sbjct: 446 DNLTSLYLAGERATSSKDPFALRRCAFSIARIILTNKIQVKLLDLLTFIYQLHDIYTNEL 505 Query: 532 -QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 ++LF D+ K L+ + + + D+L + + L+ F +S KG+ F+ Sbjct: 506 ATEVLLFIKDKTKNLLNAKFNHLLVEAIFQQNNYDDLTELELRMNILDHFLTSTKGQNFI 565 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY-AVISDFGTHIQESMDHKRYHQ 649 S KR + I+ EE + +I LL + E LY + + + + + + Sbjct: 566 QSYKRAYNIIKDEEIRQ----AKIDVCKLLTKQETILYQQAVDAKISQLFTQLSAETFSL 621 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + D L +I I F D V VN D+ + NR +LQ++ + K++ Sbjct: 622 LLDQLSNIGISIAKFLDNVPVNTTDQCLTYNRKLILQHVVQWCNNIAPFDKVI 674 >gi|124025502|ref|YP_001014618.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. NATL1A] gi|123960570|gb|ABM75353.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. NATL1A] Length = 720 Score = 445 bits (1144), Expect = e-122, Method: Composition-based stats. Identities = 180/766 (23%), Positives = 314/766 (40%), Gaps = 112/766 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA + L + + L + + + TP R+ L ++G++ Sbjct: 1 MSTYLLEIGTEELPADLAESVISQLELSVNNDLNSAQIKFSEISVTTTPRRIALTIEGIA 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P S + I ER GP V G KA GF + L ++ KG A Sbjct: 61 PFSEDNIAERKGPPVSQAFHDGQPTKAAIGFAKRYELSPEKLEI--RETSKGSFVFAKSI 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + + +L +P I K+ + MRW F + RP++ I+ +L +E Sbjct: 119 EKGKPVTTLLSDYLPRWISKIQGRRFMRWGKGD-----FRFSRPIRWIVSLLDSE----- 168 Query: 175 IIDLDLKEIPCG----NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ + NI+ HR + +K+ Y L++ V +D R + I + Sbjct: 169 VLPFKISGCDPEIQIGNISRPHRLYGAK-LKINDAKTYFDQLQDVGVTVDRGRRLSCIND 227 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 ++ LL E+ L+E + G FD+ +L LP E++ +K +Q+ Sbjct: 228 LVLNHEIDKKVKPDLTDPLLNELTDLIESPLLVTGCFDETFLELPPEVLSTVMKVHQRYI 287 Query: 291 VTR-----------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 + +L F+ +SN + I++GN +V+ AR DA F K Sbjct: 288 PLYKVNVEFDPLSLDSKNILLPTFLCISNGLPT-AKEKIIKGNEKVLKARFADASFFIKS 346 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D L R+ +L DV F +G+ ERV+RI L K Sbjct: 347 D--------------------LLISSSSRINKLK--DVTFAEGLGSLYERVNRIEWLVKL 384 Query: 400 IAQLIDADVALVDRA---IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 + ++ D + ++ SK DL + +V EFPELQG IG +Y + + E+ C + Sbjct: 385 LTLKLEFDQEDIQKSVKVAHFSKHDLVSNMVDEFPELQGIIGSKYLLHEGESRDVCLGVL 444 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 EH KP+G +++P+N + VSL ++ + LI+ +A E+PSGS DPYALRRA GI+ I+ Sbjct: 445 EHYKPKGTSDSLPSNNLGNAVSLGERFELLISIYAKGERPSGSSDPYALRRAANGILLIL 504 Query: 517 LENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLI 556 + +++ ++D L FF R+ L ++D+ D+I Sbjct: 505 WNKDWQLNINKILDDSLIYWQQLFPSLSLDISNLLSELKEFFRQRIISLLEEKDVEFDII 564 Query: 557 EAI------LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EKKNR 608 +A+ D+ + L E + R ++ A K Sbjct: 565 QAVAGDTTSTSKLLDDPTDVYFRTSLLMEMRKNNTLNLLQAVVTRASKLAAKSSISKDVI 624 Query: 609 EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD-- 666 + + + E+ ++ V+ + + D +Y + D L S E + FFD Sbjct: 625 DPLDFVDRSLFEKDCEREMFDVLEKLKP-LAVNCDRDKYKLLADGLVSSTETLSNFFDGE 683 Query: 667 -QVLVNVDD----------REVRDNRLSLLQYIKNIILIVINVQKI 701 V+V +D + ++N L + + K+ Sbjct: 684 GSVMVMTEDVNLRNNRLNLLTI----------LRNQSLKLADFSKL 719 >gi|158313955|ref|YP_001506463.1| glycyl-tRNA synthetase, beta subunit [Frankia sp. EAN1pec] gi|158109360|gb|ABW11557.1| glycyl-tRNA synthetase, beta subunit [Frankia sp. EAN1pec] Length = 1019 Score = 445 bits (1144), Expect = e-122, Method: Composition-based stats. Identities = 184/742 (24%), Positives = 306/742 (41%), Gaps = 91/742 (12%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 L EI +EE+PA + + L+ L + Y +R TP R+ + ++P Sbjct: 311 ATLLFEIGTEELPAAEVTRQTAAVRAALVERLAATRLTYGELRVQGTPRRIVAIVDDVAP 370 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+ GP GA KA GF+R G ++ + V Sbjct: 371 REPDVERVVRGPRRSAAYDAQGAPTKAATGFVRGQGGDVADLTVVEHR--GVEHVALVRT 428 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +VL ++ + + ++MRW+ S+ RP++ ++ +L Sbjct: 429 DTGRPATEVLAEVLGAVLGGLRAERNMRWNDPE-----LSFSRPVRWVVALLGG-----A 478 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + + G+ T GHR PI+V Y L E VLLDP RR I+++A + Sbjct: 479 VVPVAASTLAAGSTTRGHRRAGSPPIEVTGAVGYPELLAENSVLLDPAARRELIVDEAAK 538 Query: 235 LASAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ + D D+L+E+ LVE+ + +GSF+ +YL LP E++ + +Q+ Sbjct: 539 LAAEHAGTIDLDTEADVLDEVTNLVEFPRPVLGSFEPRYLDLPAEILTTVMHKHQRYLAV 598 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R G L CF+ V++ + GN VV AR EDA F+ D Sbjct: 599 RDTAGALLPCFVTVADGAVDVP--LVRAGNEAVVRARFEDAAFFFDAD------------ 644 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-------- 404 L PL+ A L + F ++G+ +R RI L A + Sbjct: 645 --------LKVPLETFRAGL--AKLTFEQRLGSVADRAERIARLAGLFADRLATSDAGAL 694 Query: 405 -DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 A+ +DRA L+K DL T++V E L G + +EYA E + A+ E PR Sbjct: 695 SPAERRTLDRAGELAKFDLATQMVIELSSLAGTMAREYARRAGEPEAVAVALHEMELPRR 754 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN---- 519 +P ++LAD++D L +A++ P+GS DP+ LRRA LG+ I+ E Sbjct: 755 AGGTLPATVPGALLALADRIDLLAGLFALDAAPTGSSDPFGLRRAALGVTAILAERPELA 814 Query: 520 ---------------KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + +P + + F R YL D + H L+ A LRP Sbjct: 815 GITVADMLAEAAKLVPVPVPEAALEQAD---AFVRGRFAQYLLDTGVDHRLVGA-LRPLT 870 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 + +K L +A + + R+ +I+ + EIS + P A+ Sbjct: 871 GRPGQAMVTLKALRPLVETASFARLAAALGRVRRIVPADVAPGIEISALVDP------AD 924 Query: 625 KRLYAVISDFGTHIQESMDHK-----RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 RL +++ + + + + + ++ FFD VLV DD +R Sbjct: 925 HRLAQAVTELSRQLAARTAGRLPGLDDFVAAAG---QLPDAVDGFFDAVLVMADDPALRA 981 Query: 680 NRLSLLQYIKNIILIVINVQKI 701 RL LL I+++ V++ + Sbjct: 982 ARLGLLAEIRDVAAEVLDWDAL 1003 >gi|72382003|ref|YP_291358.1| glycyl-tRNA synthetase subunit beta [Prochlorococcus marinus str. NATL2A] gi|72001853|gb|AAZ57655.1| glycyl-tRNA synthetase beta chain [Prochlorococcus marinus str. NATL2A] Length = 720 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 179/729 (24%), Positives = 307/729 (42%), Gaps = 92/729 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA + L + + L + + + TP R+ L ++G++ Sbjct: 1 MSTYLLEIGTEELPADLAESVISQLELSVNNDLNSAQIKFSEISVTTTPRRIALTIEGIA 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P S + I ER GP V G KA GF + L ++ KG A Sbjct: 61 PFSEDNIAERKGPPVSQAFHDGKPTKAAIGFAKRYELSPEKLEI--RETSKGSFVFAKSI 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + + VL +P I K+ + MRW F + RP++ I+ +L +E Sbjct: 119 EKGKPVTTVLSDYLPRWISKIQGRRFMRWGKGD-----FRFSRPIRWIVSLLDSE----- 168 Query: 175 IIDLDLKEIPCG----NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ + NI+ HR + +++ Y L++ V +D + R + I + Sbjct: 169 VLPFKISGCDPEIQIGNISRPHRLYGTK-LEINDAKTYFDQLQDVGVTVDRDRRLSCIND 227 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 ++ LL E+ L+E + G FD+ +L LP E++ +K +Q+ Sbjct: 228 LVLNHEIDKKVKPDLTDPLLNELTDLIESPLLVTGCFDESFLELPPEVLSTVMKVHQRYI 287 Query: 291 VTR-----------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 + L F+ +SN S I++GN +V+ AR DA F K Sbjct: 288 PLYKVNVEFDPLSLNSKNTLLPTFLCISNGLPS-AKEKIIKGNEKVLKARFADASFFIKS 346 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D L R+ +L DV F +G+ ERV+RI L K Sbjct: 347 D--------------------LLISSSSRIDKLK--DVTFAEGLGSLYERVNRIEWLVKL 384 Query: 400 IAQLIDADVALVDRA---IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 + ++ D + ++ SK DL + +V EFPELQG IG +Y + + E+ C + Sbjct: 385 LTLKLEFDQEDIQKSVKVAHFSKHDLVSNMVDEFPELQGIIGSKYLLHEGESRDVCLGVL 444 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 EH KP+G +++P+N + VSLA++ + LI+ +A E+PSGS DPYALRRA GI+ I+ Sbjct: 445 EHYKPKGTSDSLPSNNLGNAVSLAERFELLISIYAKGERPSGSSDPYALRRAANGILLIL 504 Query: 517 LENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLI 556 + +++ ++D +L FF R+ L ++D+ D+I Sbjct: 505 WNKDWQLNINKILDDSLIYWQQLFPSLSLDISNLLSDLKEFFRQRIISLLEEKDVEFDII 564 Query: 557 EAI------LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EKKNR 608 +A+ D+ + L E + R ++ A K Sbjct: 565 QAVAGDTTSTSKLLDDPTDVYFRTSLLMEMRKNNTLNLLQAVVTRASRLAAKSSISKDVI 624 Query: 609 EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD-- 666 + + + E+ ++ V+ + + D +Y + D L S E + FFD Sbjct: 625 DPLDFVDRSLFEKDCEREMFDVLEKLKP-LAVNCDRDKYKLLADGLVSSTETLSNFFDGE 683 Query: 667 -QVLVNVDD 674 V+V +D Sbjct: 684 GSVMVMTED 692 >gi|329924044|ref|ZP_08279307.1| glycine--tRNA ligase, beta subunit [Paenibacillus sp. HGF5] gi|328940883|gb|EGG37191.1| glycine--tRNA ligase, beta subunit [Paenibacillus sp. HGF5] Length = 494 Score = 439 bits (1128), Expect = e-120, Method: Composition-based stats. Identities = 157/530 (29%), Positives = 262/530 (49%), Gaps = 47/530 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI EE+PAR A E L L+ L + + + + TP RL ++++ + Sbjct: 1 MSKDLLFEIGLEEVPARFLRAAMEQLQDKLVKWLDASRIAHGEVTAFATPRRLAVWVQNV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF +S G+ S K+ + Sbjct: 61 ADKQEDVSEEVKGPSRKIALDDSGQWSKAALGFAKSQGVDPES--FTFKELGGVEYIYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +L + + + +PK+MRW F ++RP+K ++ +L +E Sbjct: 119 KNSVGVDTKSILSEGLLGILTSMTFPKNMRWGAHE-----FKFVRPIKWMVAMLGSET-- 171 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +DL++ + GN+T GHRF + + Y L E V++D + R+ I++ Sbjct: 172 ---VDLEITGVKAGNVTRGHRFLGGEAV-IPEASAYRDVLREQHVIVDVDERQEMIVSQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA + DLLEE++ LVE V GSFD +L +P+E++ +++ +Q+ F Sbjct: 228 QALAQEKDWNIAIKDDLLEEVLFLVETPTVLYGSFDSSFLHIPQEVLITSMREHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L F+ V + + I +GN +V+ ARL DA F++ DQ Sbjct: 288 LDKQGQLLPYFVTVRSGDSR-SLDVIARGNEKVLRARLSDAKFFYEEDQKLQIK------ 340 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 +++L+ +VFH ++GT G++V RIR + +++ ++ D Sbjct: 341 --------------DALSKLE--SIVFHEELGTIGDKVRRIRRISDQLSAKLNVSADAAD 384 Query: 413 ---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA + K DL T++V EFPELQG +G++YA E A+ EH +PR ++VP Sbjct: 385 SVSRAADICKFDLVTQMVYEFPELQGVMGEDYARKAGEKEHVAKAVFEHYQPRFAGDSVP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 + + VS+ADK+DT++ ++I P+GS+DPYALRR GI++IILE+ Sbjct: 445 STMVGSIVSIADKIDTIVGCFSIGIIPTGSQDPYALRRQAAGIVQIILEH 494 >gi|159040006|ref|YP_001539259.1| glycyl-tRNA synthetase, beta subunit [Salinispora arenicola CNS-205] gi|157918841|gb|ABW00269.1| glycyl-tRNA synthetase, beta subunit [Salinispora arenicola CNS-205] Length = 993 Score = 439 bits (1128), Expect = e-120, Method: Composition-based stats. Identities = 174/725 (24%), Positives = 294/725 (40%), Gaps = 74/725 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 + E+ EE+P A + + L L + + +R + TP R+ + ++ Sbjct: 314 LVFEVGVEEMPPAEARDARQQVENALTARLAAGRLPHGAIRVHATPRRITAIVTDVADRE 373 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GPRV G A GF RS G+ I D + + +P Sbjct: 374 TDAVTTMRGPRVSVAFKDGTPTPAAQGFARSHGVSAEELATIVVDGQ--EYLCVHREEPG 431 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R + L + + + K+MRWS + RP++ +L + + Sbjct: 432 RPAVEALAETLSTVVGGLRSAKNMRWSDPE-----LVFTRPIRWLLAMW-----GNAPVP 481 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 ++ + T HR + V S Y+ L A ++LD RR I++ A A+ Sbjct: 482 VNASRLRADTSTRVHRNADQPIVPVSSAGAYLPALAAAGIVLDERARRQVIIDAARTAAA 541 Query: 238 AVGLELVEDKD--LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 VG + D + LL++I LVE +G FD YL LP+ ++ ++ +Q+ R Sbjct: 542 TVGGSIDVDGEAPLLDQITFLVEQPTAILGDFDPGYLGLPDAILTTVMRKHQRYLPVRDT 601 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L F++++N A + GN V+ AR EDA F++ DQ Sbjct: 602 DGQLLPHFVVIANGVID--RATVQAGNEAVLRARFEDAAFFYRADQTV------------ 647 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVALVD 412 P+ RL + F K+G+ R RI L + +A + D++ ++ Sbjct: 648 --------PIATMRKRLHR--LTFTDKLGSMANRADRIAGLAQALASDVSLKDSERTTLE 697 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL +++V E L G +G+EYA+ E A+ E PR + +P + Sbjct: 698 RAAQIVKFDLGSQMVTEMTSLAGIMGREYALHAGETADVAAAMFEAELPRHADDQLPHST 757 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI------ILENKIDIPLS 526 ++LADKLD+LI A P+ S DP+ALRRA +G I I + + L+ Sbjct: 758 PGALLALADKLDSLIGLAATVGLPTSSSDPFALRRAAVGTIAIHRGTPALAGLSLRDALA 817 Query: 527 QF----------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + + F RL+ L D D + A++ D T +++ Sbjct: 818 EAARLQPVPVTSETIDAVSEFVTRRLEQQLLDEGHAVDRVRAVI-IHADKPSTADRVLRQ 876 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L + +F + +R +I E P L AE L+ +S Sbjct: 877 LTNLADTPDFRRFAAALQRARRIATTG-------GAEYDPAALTEPAELHLHETVSKSAG 929 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + E D G L + ++ FD +LV DD +VR RL L+ + + V+ Sbjct: 930 ELPEHADLGDLVAAGGALPA---AVDTSFDGILVMADDPQVRARRLGLVGAVAALGDGVL 986 Query: 697 NVQKI 701 + Q + Sbjct: 987 DWQAL 991 >gi|315500103|ref|YP_004088906.1| glycyl-tRNA synthetase, beta subunit [Asticcacaulis excentricus CB 48] gi|315418115|gb|ADU14755.1| glycyl-tRNA synthetase, beta subunit [Asticcacaulis excentricus CB 48] Length = 759 Score = 438 bits (1126), Expect = e-120, Method: Composition-based stats. Identities = 206/532 (38%), Positives = 300/532 (56%), Gaps = 39/532 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L+E++SEEIPARMQ +AA D + K +G+I+ +++ Y P RL L+++GL Sbjct: 1 MAQLLIELFSEEIPARMQLQAARDFERLFGDRAKAQGLIWHSLKAYVGPRRLALHVEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EE GP+ GA ++A+ GFLR GL + G +A + KP + Sbjct: 61 LEQAAVTEEVKGPKDGAPEQAMAGFLRKVGLTQDQLVL-----ENGVW-MARIEKPAKRT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL I+ I PWPKSMR S+F W+RPLK IL + K+I L + Sbjct: 115 AEVLPGILEDVILTFPWPKSMRSG-----TSSFRWVRPLKRILFLF-----DGKVIPLSV 164 Query: 181 KEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + G++T GHR + V+ Y L + V+LD R++ IL+ A+ +A Sbjct: 165 GGVTSGDLTQGHRVLSSLEAFAVKDFADYQLKLRDNFVILDHIERQSLILDKANEACAAA 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGV 298 G L++D LLEE+ GL EW +G D K+L LP E+I+ +++T+QK F R G Sbjct: 225 GCALMDDPGLLEEVAGLNEWPTPLLGDMDPKFLSLPPEVIKTSMRTHQKYFAVRDLSTGK 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 +A FI+V+N A+DGGA I +GN++V++ARL D + FW D Sbjct: 285 MAAKFIIVANQVANDGGAEIRRGNAKVLSARLSDGVFFWSEDNR---------------- 328 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 D + +L+ V +HAK+GT +RV+RI L + IA L+ ADV+L A L+ Sbjct: 329 ---KGNFDAWLQKLN--GVTYHAKLGTMAQRVARIEALAEVIAPLVKADVSLAKSAAHLA 383 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA +AI EH KP+GP ++VP + V+ Sbjct: 384 KADLASYMVGEFPELQGVMGGYYAEAARLPGDVAEAIREHYKPQGPSDSVPEGAVPAAVA 443 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 LADK+DTL+ F+AI+EKP+GSKDPYALRRA LGI+RI+ ++ + LS+ + Sbjct: 444 LADKIDTLVGFFAIDEKPTGSKDPYALRRAALGILRILRQHNVRASLSELVA 495 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 4/171 (2%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 FF DRLK+ L D +R D++EA ++D+++ V IK L ++ G + + Sbjct: 590 EFADFFADRLKVMLKDEGVRFDVVEAGFALKDDDMVRTVGRIKALESVLATPAGTELQAA 649 Query: 593 AKRIFQILAIEEKKNREISLEISPQYLLL--EAEKRLYAVISDFGTHIQESMDHKRYHQI 650 R IL E KK + E P+ L E E L + ++ +D +++ + Sbjct: 650 YTRFANILNAEAKKGALPTAE--PKLLSGAPEVETALTQQVIALTPVLERLIDAEQFEEA 707 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D L + ++ F D VLVN D R+NRLSLL ++ + V ++ K+ Sbjct: 708 LDKLAGLHGAVDAFLDGVLVNSDVAAERENRLSLLSALRRLFDGVGDLSKL 758 >gi|73666637|ref|YP_302653.1| glycyl-tRNA synthetase, beta subunit [Ehrlichia canis str. Jake] gi|72393778|gb|AAZ68055.1| glycyl-tRNA synthetase beta chain [Ehrlichia canis str. Jake] Length = 701 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 212/737 (28%), Positives = 360/737 (48%), Gaps = 77/737 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 MP + L E SEEIP MQ+ A ++ + L + ++++ + TP+RL LY+ + Sbjct: 1 MPLELLFECLSEEIPPEMQNSAYLYINSYIKKELNRYNINFKSIEVFVTPNRLTLYVNNI 60 Query: 60 SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 S + +R GP+V A K AI+GFL+ + ISD I K Y + + Sbjct: 61 VNSSSNNLLKRKGPKVSADKIAIEGFLKKVN-KKISDLIICKVGNDEFYYAEISNNIEIN 119 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 E+++ +I+ + PW K MRW T ++ WIRP+ +I+CIL K++ + Sbjct: 120 TENIISSIIENMLTNFPWDKKMRWGTGNTH-----WIRPIINIMCIL-----DGKVLPIK 169 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 +I N + G+RF +V+ + YI L++ V+L E R N+IL + Sbjct: 170 FADIEANNKSRGNRF--TKFFEVKDFNSYISQLKKNNVILCQEERMNSILQQIQNITEEN 227 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 L +++L+ ++ G++E+ V MGS D+K+ LP+ELI + +QK G Sbjct: 228 NLVCENNQNLINKLNGILEYPIVIMGSVDEKFHDLPKELILSVMHNHQKYLAAF--TGGK 285 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 FI +S + AI+ G++ V+ ARL DA +D+ Sbjct: 286 ITNFITISTVS----NDAIISGHNNVLNARLSDASFLINKDKEY---------------- 325 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVLS 418 +D + +L ++VFHAK+G+ E+V+RI L K I+ I + + V+RA LS Sbjct: 326 ----NIDYYIEKLK--NIVFHAKLGSVFEKVNRIVALSKYISMWIPHSSLIKVERASQLS 379 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T V+EFPELQG IG YA NE + ++I H +P + P++ I+I VS Sbjct: 380 KFDLSTLAVKEFPELQGIIGGYYASYFNEELEISESIVNHYEPTSSKKECPSSPITIAVS 439 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 ++DK D+L+ E+ +GS+DP+++RR + +IR I+EN ++IP+ +E Sbjct: 440 ISDKTDSLVGMIVAGEQVTGSRDPFSIRRMAISVIRTIIENNLNIPIKLLVEKSVSLYSY 499 Query: 532 -------------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPEND 565 ++ FF +R K+ L + I+ D+I A++ + + Sbjct: 500 AITEKNAINKIKDVISRKNRRKDIIFYVLEFFSNRFKIMLKEDGIKEDIINAVIESRKFN 559 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 NLL I LNE+ + G + + + KR+ I IE+ + + + + E Sbjct: 560 NLLIIKKEANLLNEYVFTNNGIEIIKAYKRLSNISDIEDNISITTKQKPNKKLFSANEEH 619 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD-DREVRDNRLSL 684 LY IS +I++ + ++ + D L++ + F D V VN ++E+ NR+SL Sbjct: 620 DLYKEISYQKNNIKKLIKENKFKESLDNLYNFSCCVNRFMDNVKVNDKMNKELYKNRISL 679 Query: 685 LQYIKNIILIVINVQKI 701 ++ I +V + KI Sbjct: 680 VKSAFYIFDLVTDFSKI 696 >gi|315453371|ref|YP_004073641.1| glycyl-tRNA synthetase beta chain [Helicobacter felis ATCC 49179] gi|315132423|emb|CBY83051.1| glycyl-tRNA synthetase beta chain [Helicobacter felis ATCC 49179] Length = 691 Score = 435 bits (1118), Expect = e-119, Method: Composition-based stats. Identities = 187/730 (25%), Positives = 315/730 (43%), Gaps = 75/730 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA+ ++ L++ G+ + ++TP RL LY H+ Sbjct: 5 LLIEILVEEMPAKPLLDELPNIPKKFCHSLEKHGLGGTALEVFYTPTRLVLYAPNFPTHT 64 Query: 64 PEKIEERLGPRVGAGK--------------KAIDGFLRSTGLQTISDCQIKKDPKKGDVY 109 P EE GP + G F L ++ K +V Sbjct: 65 PAITEEFFGPPLDIGTNVEKGVKEGTRVLNPIGLKFYAKLNLPPN--LEVGMKNNK-EVL 121 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A R +L I+ + + + KSM W + +IRP+ ++ I +E Sbjct: 122 YATKRTEPIPTATLLDDILLHFLGALDFGKSMAWGALKA-----RFIRPIHNLCVIFGSE 176 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 D + T H + Y + LEE V+LDP RR IL Sbjct: 177 DIDLSAC-TNTYGCSAKRATKLHFSKGFGYHDTPDISTYFKTLEEGFVILDPLKRRTRIL 235 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + H L + + D +LLEEII + + G F+ +L LP E+ +++T+Q+ Sbjct: 236 DQIHALEDQHHMRVEVDPELLEEIIAITAYPTALYGEFEAHFLQLPTEIATTSMQTHQRY 295 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F T ++ L + F++VSN+ + + I+ GN +V+ ARL DA+ F++ D Sbjct: 296 FPTF-KDSSLHHGFVVVSNLPSKGDFSQIIAGNEKVLKARLSDAIFFYQND--------- 345 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L L+ + + + F +G+ ++V R + +G + + Sbjct: 346 -----------LQTSLEWEVVGPKLEQISFMQGLGSLKDKVEREQRIGAWLVDRYGEESM 394 Query: 410 --LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 LV + + L+KADLC+E+V EFPELQG +G YA N C AI+E P Sbjct: 395 RPLVQKILELAKADLCSEVVYEFPELQGIMGGYYAKHHNHPQEVCQAIQEQYLPTSENAP 454 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-- 525 +P++ ++ +LA KLDTL++ +++ + P+GSKDP+ALRRA G++RI L ++D L Sbjct: 455 LPSSLLAALSALAIKLDTLLSLFSVGKIPTGSKDPFALRRACNGVLRICLHYQLDFNLAS 514 Query: 526 -----SQFIEDQN---LILFFHDRLKLYLHDRDIRHDLIEAI------LRPENDNLLTIV 571 ++F L F +R L D A+ L+ EN + I Sbjct: 515 DLQTIARFYAPFEWTLLQDFILERFTHVLGD--FDPSFYRAVLKGLQTLKSENYGICQIA 572 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ L+ FF+ + KR+ I + L+ P +E LY Sbjct: 573 HKVQALHVFFAQENTADLVAIFKRVANIT------QLDTLLQTDPALFTDSSEHALYETY 626 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + M+ + L + +P+E FF++VLVN + +V++NR LL I + Sbjct: 627 ENIAR-----MEFGNFLDKLKALSHLKQPLENFFEKVLVNDPNLQVQNNRKGLLALIYHA 681 Query: 692 ILIVINVQKI 701 L V +++ + Sbjct: 682 FLDVADIKDL 691 >gi|254797100|ref|YP_003081938.1| glycyl-tRNA synthetase, beta subunit [Neorickettsia risticii str. Illinois] gi|254590340|gb|ACT69702.1| glycyl-tRNA synthetase, beta subunit [Neorickettsia risticii str. Illinois] Length = 696 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 342/733 (46%), Gaps = 80/733 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLEI SEEIPA +Q A + + K+ + + + + R+ + + ++ Sbjct: 1 MPKFLLEILSEEIPAALQSYAQKSFFDLFSSATKD--LSVGKIEVFTSCRRIAVLIDDVN 58 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 K ++ GP VG+ ++ F S G + S+ IK K + Y A + I Sbjct: 59 SDPVNKKVDKKGPSVGSDLSVVERFATSMG-TSASNLYIKSIGNK-EYYFAPVVGKVLCI 116 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++V++ ++ WP+SMRW + +WIRP+KSI+C+L + +I + Sbjct: 117 DEVMRQRTEDILRSFSWPRSMRWGNY-----SLNWIRPIKSIVCML-----GKSVIPVQF 166 Query: 181 KEIPCGNITY-GHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 G +T H A IK+ S + Y L + V+L R N I +L + Sbjct: 167 HHYTAGAVTIGAHVDPALKKIKITSAEEYKSLLMKGGVVLSQFERENLIKAQISQLEAEH 226 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G + ++LL E++G+ E V MGSF + +L L E ++ I ++QK F ++ G L Sbjct: 227 GFSVCVTEELLSEVVGITESPNVLMGSFPQSFLDLHECIVETVIVSHQKVFPV-SKNGRL 285 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 N F++VS+I ++ A ++G RV+ ARL DA A + Sbjct: 286 LNKFVVVSSISSN----APIRGYERVITARLADA--------------------ASMVLI 321 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVLS 418 D PL + +L ++FH K+G+ E+V R+R L K IA + +A + V+ A L+ Sbjct: 322 DSKTPLCELGPKLKQ--LIFHKKLGSFREKVQRVRALAKFIAFWVPNASIIKVEEAAELA 379 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENI-SCCDAIEEHLKPRGPLENVPTNKISITV 477 K DL T VR+FP+L G +G Y L E DA+ +H P + P +++T+ Sbjct: 380 KLDLLTTFVRDFPKLAGFVGSHYLNLGGETDVEIIDAVRDHYLPVDAADVCPNAPVTVTL 439 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ-FIEDQNL-- 534 +LADK+DTL+ ++ EK + ++DP +RRA +G++RII+ENK+D+PL ++ +L Sbjct: 440 ALADKIDTLVGLISVKEKVTSTRDPLGIRRAAIGVLRIIIENKLDVPLQVFLMKAIDLYP 499 Query: 535 -----------------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 + FF +RLK L + + A+ Sbjct: 500 SSLFFSLIKKIGASSDEEKQRKDDVVNFTLSFFSERLKALLLKSGVSQAVFAAV-SGGIT 558 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + + ++E+ A G +F+ KR+ IL + + S + L+L E Sbjct: 559 RPLVLTEKCIAISEWLKQADGAEFVQLHKRMMGILK---GFSGSAKAKFSKKVLVLPEEV 615 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L F + ++ + + + +PI +F D VLVNV+D E+R NR+ LL Sbjct: 616 SLVQEFEVFQSLFCNALKERNFEMAFSRCADLLKPITVFMDSVLVNVEDPELRKNRIGLL 675 Query: 686 QYIKNIILIVINV 698 I + + + Sbjct: 676 LSISETLNELCDF 688 >gi|298736070|ref|YP_003728595.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori B8] gi|298355259|emb|CBI66131.1| glycyl-tRNA synthetase beta chain [Helicobacter pylori B8] Length = 701 Score = 432 bits (1111), Expect = e-118, Method: Composition-based stats. Identities = 194/731 (26%), Positives = 327/731 (44%), Gaps = 68/731 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDPKHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-QPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 G--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHHIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAV 296 Query: 293 RTREGV-----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 +++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + Sbjct: 297 FSQKSQEESPTLHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYENDLKKPLDN 355 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 + L+ L L +M R + K + ++ Sbjct: 356 APLERVVFVQGLG---TLKDKMERESTIAQCLTQKYISSLN-------------MPLEKA 399 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P Sbjct: 400 LELVKRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAP 459 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-S 526 +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II ++ L + Sbjct: 460 LPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKA 519 Query: 527 QFIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 L F +R + D +I ++L +++ I+ + Sbjct: 520 DLKSLFEKVGVYQSFDLEVLEKFLLERFHNLI---DCNPSIIRSVLNTNERDIVKIIQKV 576 Query: 575 KHLNEFFSSA----KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 K L F K E + KR+ I + +N S S E L+ Sbjct: 577 KALKRFLDDPKNARKKELLFSAFKRLANI---NKDRNPNESSGFSISLFKEPEEHALFEA 633 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + T E +D K + S+ P+E +F VLV D E++ NR + L + Sbjct: 634 FNAIKTSAFEGLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQ 688 Query: 691 IILIVINVQKI 701 L + ++++I Sbjct: 689 SFLEIGDIKEI 699 >gi|271965733|ref|YP_003339929.1| glycine--tRNA ligase [Streptosporangium roseum DSM 43021] gi|270508908|gb|ACZ87186.1| Glycine--tRNA ligase [Streptosporangium roseum DSM 43021] Length = 1024 Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats. Identities = 176/732 (24%), Positives = 302/732 (41%), Gaps = 76/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + EI +EE+PA + A + + L + + +R Y TP R+ ++ + P Sbjct: 329 ATLVFEIGTEELPAGDVTRTAATVRDAVARKLAATRLGHGGIRTYATPRRVVTIVEQVQP 388 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+ + GPRV G KA GF R + +I D V Sbjct: 389 REPDSEQTVRGPRVSVAYADDGEPTKAAVGFARGRQVDVAKLRRI--DVDGVAHVGVVRP 446 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R VL ++ + ++ K+MRW+ S++RPL+ +L +L + Sbjct: 447 DPGRDAVAVLSELLGQVVAELRADKNMRWNDPK-----LSFVRPLRWLLALL-----GDV 496 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + L + + G T R A ++V S D Y+ L ++LDP RR I+ A R Sbjct: 497 PVPLAVSALAGGTTTRVLRNAAEPSVEVPSADGYLELLAGEGIVLDPAERRTRIVRAAQR 556 Query: 235 LASAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA VG + + L++EI LVE G F ++YL LP E++ ++ +Q+ Sbjct: 557 LARDVGGVVDVEGESALIDEITNLVEEPTPIRGGFAEEYLALPSEILMTVMRKHQRYLPV 616 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G L FI V+N + GN V+ AR EDAL FW+ D + P+ Sbjct: 617 RAADGTLMPYFITVANGSCDQ--EVVGTGNEAVLRARYEDALFFWRADLDVSPDRFRAAL 674 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L F L R D + V + + +A+ + Sbjct: 675 DKLSFAE----NLGSMADRADRIAAVAQDL-------------GALPMVFMTEAERRTLT 717 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L+K DL + +V E L G + +EYA+ E A+ E +PR +P + Sbjct: 718 RAAALAKFDLASHMVVELTSLAGTMAREYALRAGEPEPVAQALHEMEQPRSAGGQLPRST 777 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN------------- 519 ++LAD+LD L+ + I P+G DP+ LRRA G++ I+ ++ Sbjct: 778 PGALLALADRLDLLVGMFGIGSGPTGRSDPFGLRRAASGLVSILRDHTALRSMDVSACLA 837 Query: 520 ---------KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 +D+P + + F R + L D H + A+L P + Sbjct: 838 VAAEHLRARAVDVPATTL---DEIREFVTRRYEQQLLDSGQDHRYVAAVL-PLAGSPARA 893 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + + L++ + + + + R+ +I+ + L+ E L+ V Sbjct: 894 DETLAELHKRAKAPDFAELVAALLRVRRIVPAG------TAAGYDASRLVEPCELSLHQV 947 Query: 631 ISDFGTHIQESMDH-KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + T + E + + D ++ P+ FFD+VLV +D + R RL LL +I+ Sbjct: 948 LGEVRTALGEQPTRLRDF---VDTAAALVGPVNTFFDEVLVMDEDADRRATRLGLLAHIR 1004 Query: 690 NIILIVINVQKI 701 ++ V++ + Sbjct: 1005 DLSAGVLDWSAL 1016 >gi|309810962|ref|ZP_07704762.1| glycine--tRNA ligase, beta subunit [Dermacoccus sp. Ellin185] gi|308435116|gb|EFP58948.1| glycine--tRNA ligase, beta subunit [Dermacoccus sp. Ellin185] Length = 1021 Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats. Identities = 182/716 (25%), Positives = 309/716 (43%), Gaps = 78/716 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 F EI EE+P + + + L + + ++ TP R+ + + G+S H Sbjct: 335 TFAFEIGVEEMPPHVLDATIPAVREAVASALAGTRLEHGDVAVVGTPRRIVVTVPGVSAH 394 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ GP+V GA KA++GF R G+ + D + Sbjct: 395 EPDSETLAKGPKVAAAYKDGAPTKALEGFARGKGVSVDDVVTAEFD--GAQHVAVKQTQT 452 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R + +VL IV + + K+M+W+ ++ RP++ ++ + + ++ Sbjct: 453 GRGVLEVLGEIVADVVSGLRSDKNMKWNDPQ-----LTFSRPIRWVVALW-----GKHVV 502 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + G TY R A + V + D + LE A +LDP RR +++ A LA Sbjct: 503 PATVGSLTTGRTTYVARTAAQPHVDVAAADELVPTLEAAGFVLDPTARRRQVVDGALALA 562 Query: 237 SAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +VG + D L++EI LVE +G+F+++YL LPE+++ ++ +Q+ R Sbjct: 563 KSVGGTIDIDGEAGLVDEITNLVEEPHGVLGTFEERYLELPEQILTTVMRKHQRYLPVRD 622 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L F+ ++N D + GN V+ AR EDA FW+ D Sbjct: 623 ASGTLMPYFVTMANGSIDD--DVVRAGNESVLRARYEDAAFFWEAD-------------- 666 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALV 411 L PLD A++D + F ++G+ +R RI+ + K+A +L + A + Sbjct: 667 ------LKVPLDDFRAQID--KLTFENRLGSFAQRADRIKDVSTKLAASVELTGDEQATL 718 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L+K DL T +V E L G + +EYA+ E + DA+ E KPR +++P++ Sbjct: 719 SRAGALAKFDLSTAMVVELSSLAGTMAREYALKAGETAAVADALFEMEKPRSAGDSLPSS 778 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII----------LENKI 521 ++LAD+ D L +AI KP+GS DP+ALRRA LG++ I+ + + + Sbjct: 779 TPGALLALADRFDLLTAMFAIGAKPTGSSDPFALRRAALGVVSILRGVPAVAAISVSDGL 838 Query: 522 DIPLSQFIED---------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 D ++ E + + F R L D + L+ A L P Sbjct: 839 DAAAARLREQGVEVSDEVLASALEFVEGRFGQQLRDEGVSAALVTA-LSPSAGTPGRAAA 897 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ + + +RI +I+ L EAEK L ++ Sbjct: 898 VLADVEALRDDEAFRALVQVTQRITRIVPAG------TQPGFDASVLTDEAEKTLAPLVE 951 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 H +S+ + + EP+ FFD VLV DD ++ RL LLQ + Sbjct: 952 ALPDHSGDSLTQW-FADA----SGLTEPLNRFFDDVLVMADDEALKAARLGLLQSV 1002 >gi|308183122|ref|YP_003927249.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori PeCan4] gi|308065307|gb|ADO07199.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori PeCan4] Length = 700 Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats. Identities = 194/730 (26%), Positives = 330/730 (45%), Gaps = 67/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKHALEVGKIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW + S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIIPIVLEFLEGLNFGKSMRWGSVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHHIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAA 296 Query: 293 RTREGV----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D + + Sbjct: 297 FNQKSQESPTLHNGFIVVSNAISKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDNA 355 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L+ L L +M R ++ K + ++ + Sbjct: 356 PLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYASSLN-------------MPLEKAL 399 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 400 ELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPL 459 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQ 527 P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II ++ L + Sbjct: 460 PSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKAD 519 Query: 528 FIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L F +R + D +I ++L +++ I+ +K Sbjct: 520 LKNLFEKVGVYQSFDLEVLEKFLLERFHNLI---DCNPSIIRSVLNTNERDIVKIIQKVK 576 Query: 576 HLNEFF----SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L F ++ K E + KR+ I + +N S E S E L+ Sbjct: 577 ALKRFLDDPKNAPKKELLFSAFKRLANI---NKDRNPNESSEFSTHLFKEPKEHALFEAF 633 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + T E +D K + S+ P+E +F VLV D E++ NR + L + Sbjct: 634 NTIKTSAFEGLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQS 688 Query: 692 ILIVINVQKI 701 L + ++++I Sbjct: 689 FLEIGDIKEI 698 >gi|210135161|ref|YP_002301600.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori P12] gi|238064851|sp|B6JMJ2|SYGB_HELP2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|210133129|gb|ACJ08120.1| glycyl-tRNA synthetase beta subunit [Helicobacter pylori P12] Length = 701 Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 192/731 (26%), Positives = 327/731 (44%), Gaps = 68/731 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGTIEVFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKMQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I++ T HR I+V S Y LE+ V+LDP+ R+ IL + Sbjct: 179 N--IEVKEYGFKTKQATKTHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKRKAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHHIIVEIDRDLLDEVVAITEYPSVLLGEFDKAFLKLPSEIITTSMKENQRYFAV 296 Query: 293 RTREGV-----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 +++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D + Sbjct: 297 FSQKSQEESPTLHNGFIVVSNAISKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDN 355 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 + L+ L L +M R + K ++ Sbjct: 356 APLESVVFVQGLG---TLKDKMERESTIAQYLTQKYAPSLN-------------MPLEKA 399 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P Sbjct: 400 LELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSLKEQYLPASENAP 459 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-S 526 +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II ++ L + Sbjct: 460 LPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKA 519 Query: 527 QFIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 L F +R + D +I ++L +++ I+ + Sbjct: 520 DLKNLFEKVGIYQSFDLEILEKFLLERFNNLI---DCNPSIIRSVLNTNERDIVKIIQKV 576 Query: 575 KHLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 K L F K + + KR+ I + +N S S E L+ Sbjct: 577 KALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSGFSISLFKELQEHALFEA 633 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 FNAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQ 688 Query: 691 IILIVINVQKI 701 L + ++++I Sbjct: 689 SFLEIGDIKEI 699 >gi|302552599|ref|ZP_07304941.1| glycyl-tRNA synthetase, beta subunit [Streptomyces viridochromogenes DSM 40736] gi|302470217|gb|EFL33310.1| glycyl-tRNA synthetase, beta subunit [Streptomyces viridochromogenes DSM 40736] Length = 1009 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 172/732 (23%), Positives = 295/732 (40%), Gaps = 82/732 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 L EI EE+P E + + L + + + + TP R+ + ++ + P Sbjct: 327 TLLFEIGVEELPYADVPATTEAVRESVTAKLADTRLGHGAITVMATPRRIVITVENVQPR 386 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + GP+V GA A+ GF RS G + D K + + Sbjct: 387 ERDTVRTVRGPKVAAAYKDGAPTAALLGFARSQGADPADVRVV--DVKGVEYVSVTRHEE 444 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +VL ++ + + ++MRWS S+ RP++ +L +L + Sbjct: 445 GRPAVEVLSDLLAEVVSGLRAGRNMRWSDP-----GLSFSRPVRWLLALL-----GRTPL 494 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + + G+ T HR ++V + + Y L +LLD + RR A++ A A Sbjct: 495 PVVVSSLTAGDTTRVHRQAPYPEVRVTAAEGYPHFLHMHGILLDRDARRGAVVRGALEAA 554 Query: 237 SAVGLELVEDK--DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + VG + + L++EI ++E+ GSFD++YL LP ++ ++ +Q+ Sbjct: 555 AEVGGRIDVEDQAGLIDEITDILEFPYAVRGSFDERYLELPASVLTTVMRKHQRYLPVMD 614 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 E L F+ +N D + GN V+ AR EDA FW+ D P Sbjct: 615 GE-RLMPHFVTFANALCDD--DVVRAGNEAVLRARYEDAAFFWRADLKVTP--------- 662 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG---KKIAQLIDADVALV 411 + RLD + F ++GT +R RI VL + A L + V +V Sbjct: 663 -----------AEFRRRLD--KLTFEDRLGTVADRAERIAVLALDLTRRAGLAEETVDVV 709 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L+K DL +++V EF L G + +EYA E+ +A+ E PR +PT Sbjct: 710 RRAGALAKFDLASQMVIEFSGLAGVMAEEYARRAGESPEVAEALAEMELPRSAGGALPTG 769 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL-------------- 517 +SLAD+ D + + I +P+GS DPY +RRA +G++ ++ Sbjct: 770 DAGAVMSLADRFDLVTGMFLIGAEPTGSSDPYGVRRAAIGLLNVLRTAPAVAGLRVSDGL 829 Query: 518 --------ENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 +++P + L+ R + L D H L++A+L D Sbjct: 830 RAAAVRYAAQGVEVPAERVAAAAELVT---RRYEQQLTDAGHEHRLVQAVL-GWADRPAY 885 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L + E + +R+ +IL P L AE RL Sbjct: 886 GDRTLATLERHIGTEAFEALAAAFQRVVRILPEGG------VEAADPSLLTAPAELRLAE 939 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + ++ + E I +FFD+VLV D VR RL+LL + Sbjct: 940 SAEAVRQALHG--REDDLGALIEVSGPLVEAIGVFFDEVLVMDPDPAVRAARLALLTEVA 997 Query: 690 NIILIVINVQKI 701 + ++ + Sbjct: 998 GLARTTLDWGAL 1009 >gi|332296312|ref|YP_004438235.1| glycyl-tRNA synthetase, beta subunit [Thermodesulfobium narugense DSM 14796] gi|332179415|gb|AEE15104.1| glycyl-tRNA synthetase, beta subunit [Thermodesulfobium narugense DSM 14796] Length = 691 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 184/730 (25%), Positives = 326/730 (44%), Gaps = 75/730 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLL------KEEGVIYQNMRQYWTPHRLFLYLK 57 +LLEI EE+P D I + K+ +I Q+ Y TP R+ + Sbjct: 3 YLLEIGCEEMPFNFASSVCVDFKEIFLSKFSEIFDGKDLEMIKQSTECYATPRRI-VLFS 61 Query: 58 GLSPHSPEKIEERLGPRVG-------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 L +PE ++ GP V A+ F+ + K + G+ + Sbjct: 62 SLPDFTPETKQKIKGPPVRFAYDSNMKPMPALFKFVEKFNISVDDVMIDKSES--GEYVV 119 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 I D++ I+P + ++ PKSMRW ++RP++ IL I Sbjct: 120 FYKTDKGLKISDIIPNILPKIVSELKMPKSMRWGAG------IRFVRPIRWILSI----- 168 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 + + + L + T+ RF +V S++ Y ++E +++D R I Sbjct: 169 SDSGHVKVHLGRLESDKFTFLERFAPNEQHEVNSIEDYFNIMKEKNIIVDHNERAKMIDF 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + +++ + ++V D++LL E++ LVE + F+GSF+ ++L LP E++ + +Q+ F Sbjct: 229 EINKVLNKSQ-KIVCDENLLREVLFLVESPKAFLGSFNSEFLNLPREVLITVMARHQRYF 287 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + F+ + N D + GN +V+ ARL DA+ F K+D Sbjct: 288 AVVDNNNQIMPNFVGIINGVNKDT-KIVRAGNEKVLKARLSDAMFFMKKD---------- 336 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--IDADV 408 L+K L R+ L + V + +G ++ RIR L + I+ D Sbjct: 337 ----------LTKKLRDRLDDL--VSVSYLEGLGNYLDKTFRIRELSLAFNRFFDINLDE 384 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L+ + L K DL T++V EFPELQG +G+ YA + + AIEEH P + Sbjct: 385 ELIKNSSTLLKCDLVTQMVFEFPELQGIMGRIYAEKEGIDPEIARAIEEHYLPISMKSPL 444 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 PT + S +DK D L + N PSG+ DPY RRA+ G++RI+++ + L + Sbjct: 445 PTTLLGKLFSFSDKCDHLFMSFLNNLTPSGAGDPYGQRRASAGVLRILMDIGYENELEEI 504 Query: 529 I----------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + LI F R+ D R+DL++A+L + + Sbjct: 505 FNFALNSISYITTLPSRDISQLISFMKTRMSSLFIDMGYRYDLVDAVLDITSS-PVKAKR 563 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L E+ + + R+ +I++ ++E + L+ E+ LY Sbjct: 564 RLDVLTEWSKRKDFFDIVSTIIRLGRIIS-----DKEELVAFDSSLLVERDERELYEKFI 618 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + +++++ +K+Y +I +++ ++ PI FF+ VLVNV+D+++RDNR +LL I Sbjct: 619 NNKDKLEDAIINKKYDEILNIIINLSGPIHTFFENVLVNVEDKKIRDNRKALLNLISLPF 678 Query: 693 LIVINVQKIV 702 + N +KIV Sbjct: 679 FRLWNWKKIV 688 >gi|254779566|ref|YP_003057672.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori B38] gi|254001478|emb|CAX29483.1| Glycyl-tRNA synthetase beta chain (Glycine--tRNA ligase beta chain) (GlyRS) [Helicobacter pylori B38] Length = 701 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 197/728 (27%), Positives = 333/728 (45%), Gaps = 62/728 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + + ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGTIEVFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNNEDKTQGLNALGLGFYQKLGLKDPKHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 G--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F T Sbjct: 237 KELETKHDIIVEIDRDLLDEVVAITEYPSVLLGEFDKAFLKLPSEIITTSMKENQRYFAT 296 Query: 293 RTREGV-----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + Sbjct: 297 FCQKSQEESPTLHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYENDLKKPLDN 355 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 + L+ L L +M R ++ K ++ Sbjct: 356 APLESVVFVQGLG---TLKDKMERESIIAQYLTQKYAPSLN-------------MPLEKA 399 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P Sbjct: 400 LELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENKLVALSLKEQYLPASENAP 459 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII----LENKIDI 523 +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II LE + Sbjct: 460 LPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKA 519 Query: 524 PLSQFIEDQNLIL-FFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHL 577 L E ++ F + L+ +L +R D +I ++L +++ I+ +K L Sbjct: 520 DLKNLFEKVDVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDIVKIIQKVKAL 579 Query: 578 NEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 F K + + KR+ I + +N S S E L+ + Sbjct: 580 KRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSGFSTSLFKESQEHALFEAFNA 636 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 T ES+D K + + P+E +F VLV D E++ NR + L + L Sbjct: 637 IKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQSFL 691 Query: 694 IVINVQKI 701 + ++++I Sbjct: 692 EIGDIKEI 699 >gi|15645587|ref|NP_207763.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori 26695] gi|3024686|sp|P56454|SYGB_HELPY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|2314109|gb|AAD08014.1| glycyl-tRNA synthetase, beta subunit (glyS) [Helicobacter pylori 26695] Length = 701 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 196/731 (26%), Positives = 330/731 (45%), Gaps = 68/731 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQYFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +D++ IV ++ + + KSMRW S+IRP+ +I + ED Sbjct: 125 IHEK-EPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGEDFS 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 G--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F T Sbjct: 237 KELETKHHIIVETDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYFAT 296 Query: 293 RTREGV-----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + Sbjct: 297 FCQKSQEESPTLHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYENDLKKPLDN 355 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 + L+ L L +M R ++ K + ++ Sbjct: 356 APLESVVFVQGLG---TLKDKMERESIIAQYLTQKYISSLN-------------MPLEKA 399 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P Sbjct: 400 LELVKRAVQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAP 459 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS- 526 +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II ++ L Sbjct: 460 LPSSVFSSIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKA 519 Query: 527 ------------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 Q + + L F +R + D +I ++L +++ I+ + Sbjct: 520 DLKNLFQKVGVYQSFDLEILEKFLLERFHNLI---DCNPSIIRSVLNTNERDIVKIIQKV 576 Query: 575 KHLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 K L F K + + KR+ I + +N S E S E L+ Sbjct: 577 KALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSEFSTNLFKEPKEHALFEA 633 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 FNAIKMNAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQ 688 Query: 691 IILIVINVQKI 701 L + ++++I Sbjct: 689 SFLEIGDIKEI 699 >gi|317177763|dbj|BAJ55552.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori F16] Length = 700 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 190/730 (26%), Positives = 328/730 (44%), Gaps = 67/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFSKHALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAG------KKAI----DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V + + GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNELGLGFYQKLGLKDYQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR + I+V + Y LE+ V+LDP+ R+ IL + Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFNFIQVDNPKAYFEVLEKNHVILDPKKRKAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHHIVVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAA 296 Query: 293 RTREGV----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + + Sbjct: 297 FNQKSQESPTLHNGFIVVSNAINKD-KQKIITGNQKVLKARLSDAVFFYENDLKKPLDNA 355 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L+ L L +M R ++ K + ++ + Sbjct: 356 PLESVVFVQGLG---TLKDKMEREVIIAQYLTQKYASSLN-------------MPLEKAL 399 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 400 ELIGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPTSENAPL 459 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQ 527 P++ S V+L+ KLD+L +F+++ + PSGSKDP+ALRR + G+++II ++ L + Sbjct: 460 PSSVFSTIVALSLKLDSLFSFFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKAD 519 Query: 528 FIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L F +R + D +I ++L +++ I+ +K Sbjct: 520 LKNLFEKVGVYQSFDLEILEKFLLERFNNLI---DCNPSIIRSVLNTNERDIVKIIQKVK 576 Query: 576 HLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L F K + + KR+ I + +N S E E L+ Sbjct: 577 ALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSEFFISLFKESQEHALFEAF 633 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 NAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQS 688 Query: 692 ILIVINVQKI 701 L + ++++I Sbjct: 689 FLEIGDIKEI 698 >gi|317178678|dbj|BAJ56466.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori F30] Length = 701 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 189/731 (25%), Positives = 328/731 (44%), Gaps = 68/731 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFSKHALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAG------KKAI----DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V + + GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNELGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW + S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPIVLEFLEGLNFGKSMRWGSVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFDFIRVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYFAV 296 Query: 293 RTREGV-----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + Sbjct: 297 FDQKSQEESPTLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDN 355 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 + L+ L L +M R ++ K + ++ Sbjct: 356 APLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYASSFN-------------MPLEKA 399 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P Sbjct: 400 LELIGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAP 459 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-S 526 +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I++ ++ L + Sbjct: 460 LPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVVHYGLEFDLKA 519 Query: 527 QFIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 L F +R + D +I ++L +++ I+ + Sbjct: 520 DLKNLFEKVGVYQSFDLEVLEKFLLERFNNLI---DCNPSIIRSVLNTNERDIVKIIQKV 576 Query: 575 KHLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 K L F K + + KR+ I + +N S E E L+ Sbjct: 577 KALKRFLDDPKNAQKKELLFSTFKRLANI---NKDRNPNESSEFFISLFKESQEHALFEA 633 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + T + ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 FNAIKTSVFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQ 688 Query: 691 IILIVINVQKI 701 L + ++++I Sbjct: 689 SFLEIGDIKEI 699 >gi|317009626|gb|ADU80206.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori India7] Length = 701 Score = 428 bits (1101), Expect = e-117, Method: Composition-based stats. Identities = 192/731 (26%), Positives = 327/731 (44%), Gaps = 68/731 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ ++ L L ++ + + ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYREMPKKLHALFQKRALEVGTIEVFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ +V ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPVVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F T Sbjct: 237 KELETKHCIIVETDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYFAT 296 Query: 293 RTREGV-----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + Sbjct: 297 FCQKSQEESPTLHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYENDLKKPLDN 355 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 + L+ L L +M R ++ K + ++ Sbjct: 356 APLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYISSLN-------------MPLEKA 399 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P Sbjct: 400 LELVKRAVQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAP 459 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-S 526 +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II ++ L + Sbjct: 460 LPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKA 519 Query: 527 QFIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 L F +R + D +I ++L +++ I+ + Sbjct: 520 DLKNLFEKVGVYQSFDLEVLEKFLLERFHNLI---DCNPSIIRSVLNTNERDIVKIIQKV 576 Query: 575 KHLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 K L F K + + KR+ I + +N S E S E L+ Sbjct: 577 KALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSEFSTSLFKESQEHALFEA 633 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 FNAIKMSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQ 688 Query: 691 IILIVINVQKI 701 L + ++++I Sbjct: 689 SFLEIGDIKEI 699 >gi|312198751|ref|YP_004018812.1| glycyl-tRNA synthetase, subunit beta [Frankia sp. EuI1c] gi|311230087|gb|ADP82942.1| glycyl-tRNA synthetase, beta subunit [Frankia sp. EuI1c] Length = 1027 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 177/747 (23%), Positives = 288/747 (38%), Gaps = 91/747 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 LLEI EE+P A + + +L L E + + + TP RL + ++ Sbjct: 322 TLLLEIGVEEMPPAEAVAARDQVESLLAKKLAEGRLAHGALTVSATPRRLVATVADVASR 381 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + GP+V G A GF R+ G++ + + + V + Sbjct: 382 EADATRVVRGPKVTAAFRPDGTPTPAAAGFARANGVEVTALA--RTTENGVEHLAVVRHE 439 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R D L + ++K+ K+MRW+ S+ RP++ ++ +L E + Sbjct: 440 RGRPATDALAPALADVVRKLRASKNMRWNNPE-----LSFTRPIRWVVALL-----GESV 489 Query: 176 IDLDLKEIPCGNIT--------YGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 + +++ + G T R P +++ D Y L+ A +LLD RR Sbjct: 490 VPIEVGGLVSGRRTTLVRVAPGQPSRAGIPATVELTGADAYTAALDRAGILLDAGERRER 549 Query: 228 ILNDAHRLASAVGLELVE--DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 I A RLA+ G + + LL+E+ LVE +G FD YL LPE ++ ++ Sbjct: 550 IAAAAARLAAEAGGHVDVAAESRLLDEVSFLVEQPTPILGGFDPGYLELPEAVLTTVMRK 609 Query: 286 NQKCFVTRTREG----------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALH 335 +Q+ R L F+ V+N A+ GN V+ AR EDA Sbjct: 610 HQRYLPVRAGAAPGAAGPDDAGRLLPRFVAVANGTVDV--DAVRAGNEAVLRARFEDAAF 667 Query: 336 FWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV 395 F++ D L PL + RL + F K+G+ +R RI Sbjct: 668 FYRAD--------------------LKTPLAAMVERLSR--LTFTDKLGSMADRAGRIAT 705 Query: 396 LGKKIAQLI-----DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENIS 450 L +A + AD ++ RA L K DL +++V E L G + EYA E + Sbjct: 706 LAAGLAGRLAPGLAGADREVLRRASDLVKFDLGSQMVIELTSLAGTMAHEYAQAAGEQPA 765 Query: 451 CCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATL 510 A+ E PR +P ++LAD+LD L+ A P+GS DP+A+RRA L Sbjct: 766 VATALLEAELPRSAGGPLPATVPGALLALADRLDALVGLAATVGLPTGSSDPFAVRRAAL 825 Query: 511 GIIRIILENK--IDIPLSQFIED--------------QNLILFFHDRLKLYLHDRDIRHD 554 G + I+ + L + F RL+L L D D Sbjct: 826 GALAILRTRPELAGLSLRDALAASAAGQPVAVTAALLDETAAFLARRLELTLVDEGFPVD 885 Query: 555 LIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI 614 + A+L P D L + L + + R +I+ + Sbjct: 886 HVRAVL-PHADRPAHAERLARQLADLRGRDDFRAVAAALDRARRIVPAA------TTAGY 938 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 P L AE L+ ++ G + + P+ FFD +LV D Sbjct: 939 DPARLTEPAELALHQSVATVGAGLAGLGAAPDLVSFTAATAPLVAPVNQFFDDILVMDPD 998 Query: 675 REVRDNRLSLLQYIKNIILIVINVQKI 701 E+R RL LL ++++ V++ + Sbjct: 999 PEIRATRLGLLATVRDLGAGVLDWSAL 1025 >gi|308184750|ref|YP_003928883.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori SJM180] gi|308060670|gb|ADO02566.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori SJM180] Length = 700 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 192/730 (26%), Positives = 325/730 (44%), Gaps = 67/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKCALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAG------KKAI----DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V + + GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNNEDKTQGLNELGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPIVLEFLESLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAV 296 Query: 293 RTREGV----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + + Sbjct: 297 FNQKSQESPTLHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYENDLKKPLDNA 355 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L+ L L +M R ++ K + ++ + Sbjct: 356 PLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYASSLN-------------MPLEKAL 399 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 400 ELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPL 459 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQ 527 P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II ++ L + Sbjct: 460 PSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKAD 519 Query: 528 FIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L F +R + D +I ++L ++ I+ +K Sbjct: 520 LKNLFEKVGVYQSFDLEVLEKFLLERFNNLI---DCNPSIIRSVLNTNERGIVKIIQKVK 576 Query: 576 HLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L F K + + KR+ I + +N S E S E L+ Sbjct: 577 ALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSEFSISLFKESQEHALFEAF 633 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 NAIKTSTFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDVEIQKNRKNFLWGVYQS 688 Query: 692 ILIVINVQKI 701 L + ++++I Sbjct: 689 FLEIGDIKEI 698 >gi|109947592|ref|YP_664820.1| glycyl-tRNA synthetase subunit beta [Helicobacter acinonychis str. Sheeba] gi|109714813|emb|CAJ99821.1| glycyl-tRNA synthetase, beta chain [Helicobacter acinonychis str. Sheeba] Length = 705 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 200/735 (27%), Positives = 331/735 (45%), Gaps = 72/735 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI----YQNMRQYWTPHRLFLYLKG 58 + L+EI +EE+PA+ +++ L L ++ + QN+ ++TP RL +++K Sbjct: 5 ELLVEILTEELPAQALLNEYKEMPKKLHALFQKHAIEMQNEVQNIEIFYTPRRLCVFVKD 64 Query: 59 LSPHSPEKIEERLGPRVGAG----KKA------IDGFLRSTGLQTISDCQIKKDPKKGDV 108 + E EE GP V KA GF + GL+ Q K + Sbjct: 65 FPLLTKETKEEFFGPPVEIACNHKDKAQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVL 124 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 Y A + PK+ ++++ IV ++ + + KSMRW + S+IRP+ +I + Sbjct: 125 YHAKIN-PKQPTKNLIMPIVLEFLESLNFGKSMRWGSVEK-----SFIRPIHNICVLFNG 178 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E+ I + T HR I V S Y LE+ V+LDP+ R I Sbjct: 179 ENFNN--IKIKGYGFKTKQATKTHRQEGFDFIGVDSPKEYFEVLEKNHVILDPKKREAKI 236 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L + L + + D+DLL+EI+ + E+ V +G FDK +L LP E+I ++K NQ+ Sbjct: 237 LQEIKELEKKHQIIVEVDRDLLDEIVAITEYPTVLLGEFDKAFLKLPSEIITTSMKENQR 296 Query: 289 CFVTRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 F T +E L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 YFATFNQESQEESQKLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYENDLKK 355 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 + + L+ L L +M R ++ K Sbjct: 356 PLDNTPLESVVFVQGLG---TLKDKMERELVIAQYLTQKYAPSLN-------------MP 399 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 ++ + L+ RAI ++KADL +E+V EF ELQG +G YA+ QNEN +++E P Sbjct: 400 LEKALELIGRAIKIAKADLLSEVVYEFTELQGIMGYYYALKQNENELVALSLKEQYLPTS 459 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II+ + Sbjct: 460 ENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIVHYGLKF 519 Query: 524 PLS-QFIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 L L F +R + D +I ++L +++ I Sbjct: 520 DLKMDLKNLFEKVGVYQSFDLEVLEKFLLERFNNLI---DCNPSIIRSVLNTNERDIVAI 576 Query: 571 VDLIKHLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + +K L F K + + KR+ I + +N + E S E Sbjct: 577 IQKVKALKRFLDDPKNAQKKELLFSAFKRLANI---NKDQNPNQTSEFSTNLFKEPQEHA 633 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L+ + T ES+D K + S+ P+E +F VLV D E++ NR + L Sbjct: 634 LFKAFNAITTSAFESLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDLEIQKNRKNFLW 688 Query: 687 YIKNIILIVINVQKI 701 + L + +V++I Sbjct: 689 NVYQSFLEIGDVKEI 703 >gi|308063798|gb|ADO05685.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Sat464] Length = 700 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 192/730 (26%), Positives = 327/730 (44%), Gaps = 67/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R+ IL + Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKRKAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAV 296 Query: 293 RTREGV----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D + + Sbjct: 297 FNQKSQESPILHNGFIVVSNAISKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDNA 355 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L+ L L +M R ++ K + ++ + Sbjct: 356 PLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYASSLN-------------MPLEKAL 399 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 400 ELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPL 459 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQ 527 P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ ++ L + Sbjct: 460 PSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAHYGLEFDLKAD 519 Query: 528 FIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L F +R + D +I ++L ++ I+ +K Sbjct: 520 LKNLFEKVGVYQSFDLEVLEKFLLERFNNLI---DCNPSIIRSVLNTNERGIVKIIQKVK 576 Query: 576 HLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L F K + + KR+ I + +N S E E L+ Sbjct: 577 ALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSEFFISLFKESQEHALFEAF 633 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 NAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQS 688 Query: 692 ILIVINVQKI 701 L + ++++I Sbjct: 689 FLEIGDIKEI 698 >gi|261838340|gb|ACX98106.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori 51] Length = 700 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 193/730 (26%), Positives = 328/730 (44%), Gaps = 67/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKHALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSVLLGEFDKAFLKLPSEIITTSMKENQRYFAA 296 Query: 293 RTREGV----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + + Sbjct: 297 FNQKSQESPTLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDNA 355 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L+ L L +M R ++ K + ++ + Sbjct: 356 PLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYASSLN-------------MSLEKAL 399 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 400 ELVSRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPL 459 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQ 527 P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ ++ L + Sbjct: 460 PSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAHYGLEFDLKAD 519 Query: 528 FIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L F +R + D +I ++L +++ I+ +K Sbjct: 520 LKNLFEKVGVYQSFDLEVLEKFLLERFNNLI---DCNPSIIRSVLNTNERDIVKIIQKVK 576 Query: 576 HLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L F K + + KR+ I + +N S E S E L+ Sbjct: 577 ALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSEFSISLFKELQEHALFEAF 633 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + T ES+D K + + P+E +F VLV D ++ NR + L + Sbjct: 634 NAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIGIQKNRKNFLWGVYQS 688 Query: 692 ILIVINVQKI 701 L + ++++I Sbjct: 689 FLEIGDIKEI 698 >gi|317182271|dbj|BAJ60055.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori F57] Length = 700 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 194/730 (26%), Positives = 329/730 (45%), Gaps = 67/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFSKHALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW + S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPIVLEFLEGLNFGKSMRWGSVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIQVGSPKAYFEVLEKKHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAA 296 Query: 293 RTREGV----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D + + Sbjct: 297 FNQKSQESLTLHNGFIVVSNAISKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDNA 355 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L+ L L +M R ++ K + ++ + Sbjct: 356 PLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYASSLN-------------MSLEKAL 399 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 400 ELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPL 459 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQ 527 P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II ++ L + Sbjct: 460 PSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKAD 519 Query: 528 FIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L F +R + D +I ++L +++ I+ +K Sbjct: 520 LKNLFEKVGVYQSFDLEVLEKFLLERFNNLI---DCNPSIIRSVLNTNERDIVKIIQKVK 576 Query: 576 HLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L F K + + KR+ I + +N S E S E L+ Sbjct: 577 ALKRFLDDPKNAQKKELLFGAFKRLANI---NKDRNPNESSEFSISLFKELQEHALFEAF 633 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 NAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQS 688 Query: 692 ILIVINVQKI 701 L + ++++I Sbjct: 689 FLEIGDIKEI 698 >gi|208434873|ref|YP_002266539.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori G27] gi|238064852|sp|B5Z7X4|SYGB_HELPG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|208432802|gb|ACI27673.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori G27] Length = 701 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 195/731 (26%), Positives = 330/731 (45%), Gaps = 68/731 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNNEDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHEK-EPTKDLIMPIVLEFLEDLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR + I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQESFDFIEVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F T Sbjct: 237 KELETEHHISIEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAT 296 Query: 293 RTREGV-----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + Sbjct: 297 FCQKSQEESPTLHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYENDLKKPLDN 355 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 + L+ L L +M R ++ K ++ Sbjct: 356 APLESVVFVQGLG---TLKDKMERESIIAQYLTQKYAPSLN-------------MPLEKA 399 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P Sbjct: 400 LELVKRAVQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSLKEQYLPASENAP 459 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS- 526 +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II ++ L Sbjct: 460 LPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKA 519 Query: 527 ------------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 Q + + L F +R + D +I ++L +++ I+ + Sbjct: 520 DLKSLFEKVGVYQSFDLEILEKFLLERFNNLI---DCNPSIIRSVLNTNERDIVKIIQKV 576 Query: 575 KHLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 K L F K + + KR+ I + +N S E S E L+ Sbjct: 577 KALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSEFSISLFKESQEHALFEA 633 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + T E +D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 FNAIKTSAFEGLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWSVYQ 688 Query: 691 IILIVINVQKI 701 L + ++++I Sbjct: 689 SFLEIGDIKEI 699 >gi|317123698|ref|YP_004097810.1| glycyl-tRNA synthetase beta chain [Intrasporangium calvum DSM 43043] gi|315587786|gb|ADU47083.1| glycyl-tRNA synthetase beta chain [Intrasporangium calvum DSM 43043] Length = 1020 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 176/729 (24%), Positives = 316/729 (43%), Gaps = 79/729 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 LEI EE+P + +A E + L L + + ++ TP R+ + + H Sbjct: 334 LALEIGVEELPPHVVPEAIEQVRTALTQKLGATRLPHGSVVVQGTPRRIIALVDAVGVHE 393 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ R GP+V GA KA +GF R + ++ + + + + Sbjct: 394 PDAETLRKGPKVAAAFGPDGAATKAAEGFARGQKVDVSD--LVRAEFDGVEHVAVRVAET 451 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R + +VL +I+ + + K+MRWS ++ RP++ I+ + + ++ Sbjct: 452 GRGVLEVLGSIIADVVAGLRADKNMRWSDPE-----LAYSRPIRWIVALW-----GDTVV 501 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + + G TYG R A I+V++ D + L E ++DP RR ++++ A LA Sbjct: 502 PVTVSGLRSGRTTYGERTEAGPLIEVENADVLLPKLAERDFIVDPVARRESVVSQAKSLA 561 Query: 237 SAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 ++VG + + L++EI LVE +GSF+++YL LPE+++ ++ +Q+ R+ Sbjct: 562 ASVGGAVDVEGEAALVDEITHLVEAPHGILGSFEERYLELPEQILTTVMRKHQRYLPVRS 621 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L F+ ++N + D + +GN V+ AR EDA F+ D Sbjct: 622 GDGALLPYFVTMANGECDD--DLVRKGNENVLRARYEDAAFFYAAD-------------- 665 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---V 411 L PL++ R + + F +IG+ +R RIR + +A+L+ D + + Sbjct: 666 ------LKVPLEEL--RAGIAKLTFEERIGSVADRADRIRDVAAALAELVGLDASEGATL 717 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L+K DL +++V E L G + +EYA+ E A+ E +PR +P + Sbjct: 718 ARAGQLAKFDLASQMVVELSSLAGFMAREYALKAGETPEVAAALYEMEQPRTAGGPLPAS 777 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII----------LENKI 521 + ++LAD+ D L+ +A+ KP+GS DP+ALRRA LG+I I+ +E + Sbjct: 778 RAGAVLALADRFDLLMAMFALGAKPTGSSDPFALRRAALGVIGILRSQPTLAGLTIEQGL 837 Query: 522 DIPLSQFIED---------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 Q + + + F R L + + L A+ Sbjct: 838 HAAADQLRQQGLDVSAEAIADAVEFVTGRFGQQLREEGVPSTLAGAVQPLAGT-PGKAEV 896 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ + K + + +RI +I+ PQ L EAE+ L + Sbjct: 897 ALRDIETVRGREGFAKLVEATQRITRIVP------EGSPAAYDPQVLREEAERELSVALE 950 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + +E FFD+VLV +D +R RL LLQ Sbjct: 951 TIPDLSGAALPEW-----AGVAVRAVPALERFFDEVLVMAEDPALRAARLGLLQTFVARA 1005 Query: 693 LIVINVQKI 701 I+ + + Sbjct: 1006 PRGIDWRAL 1014 >gi|217033940|ref|ZP_03439363.1| hypothetical protein HP9810_883g10 [Helicobacter pylori 98-10] gi|216943573|gb|EEC23021.1| hypothetical protein HP9810_883g10 [Helicobacter pylori 98-10] Length = 700 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 190/730 (26%), Positives = 326/730 (44%), Gaps = 67/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAG------KKAI----DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V + + GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNELGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAA 296 Query: 293 RTREGV----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + + Sbjct: 297 FNQKSQESPTLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDNA 355 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L+ L L +M R ++ K ++ + Sbjct: 356 PLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYAPSLN-------------MPLEKAL 399 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 400 ELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPL 459 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQ 527 P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ ++ L + Sbjct: 460 PSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAHYGLEFDLKAD 519 Query: 528 FIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L F +R + D +I ++L +++ I+ +K Sbjct: 520 LKNLFEKVGVYQSFDLEILEKFLLERFHNLI---DCNPSIIRSVLNTNERDIVKIIQKVK 576 Query: 576 HLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L F K + + KR+ I + +N S E S E L+ Sbjct: 577 ALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSEFSTSLFKELQEHALFEAF 633 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + T E +D K + S+ P+E +F VLV D E++ NR + L + Sbjct: 634 NAIKTSAFEGLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQS 688 Query: 692 ILIVINVQKI 701 L + ++++I Sbjct: 689 FLEIGDIKEI 698 >gi|222475634|ref|YP_002564051.1| glycyl-tRNA synthetase beta chain (glyS) [Anaplasma marginale str. Florida] gi|255003627|ref|ZP_05278591.1| glycyl-tRNA synthetase beta chain (glyS) [Anaplasma marginale str. Puerto Rico] gi|255004754|ref|ZP_05279555.1| glycyl-tRNA synthetase beta chain (glyS) [Anaplasma marginale str. Virginia] gi|222419772|gb|ACM49795.1| glycyl-tRNA synthetase beta chain (glyS) [Anaplasma marginale str. Florida] Length = 694 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 188/729 (25%), Positives = 337/729 (46%), Gaps = 70/729 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D +LE+ E++P + A E + + + + + T HR+ L +S Sbjct: 3 SDLILEVLCEQLPTKTIKSAHEYILPRIDKEFSSRRISCDAPKVFATSHRIILIACNVSQ 62 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 +S + +E GPR+ + K+ I GFLR G + + +I++ + Y + + K L Sbjct: 63 NSSDGKKEIKGPRISSDKEVISGFLRKVGKSGVEELEIREVSGEKFYYSSSVLSSKDLTN 122 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 + L ++ I+ P K MRW T W+RP+ ++LC+L K++ + + Sbjct: 123 E-LTEVIQCMIENFPLHKRMRWGTGTGY-----WVRPVINVLCVL-----DGKVLPVSVA 171 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 I N T+G+ + V Y+ L E MV++D E RR IL + S L Sbjct: 172 GITANNRTFGNLRFSNRKYTVTKAAEYLNFLSENMVIVDVEARRKHILEQLNEQISGTEL 231 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 ++ +LE++ +E+ +V +GS DK + +P E++ + +Q+ + + G + Sbjct: 232 TYDQNAQILEDMSSNLEYPKVLIGSVDKNFSEIPTEVVSCVMTNHQRYLAIKDQSGKIVK 291 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 S + +++ + +V+ ARL DAL K+D+ Sbjct: 292 FASAASVV-----NNMVIKNHEKVLRARLSDALFLIKKDKE------------------- 327 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-VDRAIVLSKA 420 +D + L VVF + +GT ++ RI L K + I L +RA ++SKA Sbjct: 328 -HNMDYYVGLLS--GVVFKSGLGTLLDKAERISALAKYCSVWIPRSSMLNTERAAMISKA 384 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T +VREFPELQGKIG+ YA E C AIEEH P G ++ P + I I VS+A Sbjct: 385 DLATLVVREFPELQGKIGRYYAKHSGEEEEVCVAIEEHYLPIGQKDHCPKSPIGIAVSIA 444 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DK+D+L+ A E SGS+DP+ALRR ++ ++R+++EN + IPL + Sbjct: 445 DKVDSLVGLMA-TENISGSRDPFALRRTSISLLRVMIENSVSIPLDLMVSKAVSMYMCKA 503 Query: 532 ------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ++ F +DRLK+ L + D+ ++++AI+ ++ + Sbjct: 504 RLNKNEGRFLRVDRDALISTILSFCYDRLKVILKESDLDKEVVDAIVGT-LHDIPIVKKK 562 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + F + KG+ + + +R I++ E + ++ + + + + E +LY I Sbjct: 563 VEVICSFLKTEKGKSVITAYRRANNIISK-ESFDWKLDGKSNKRLCKEDCEIQLYNQIQH 621 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD-DREVRDNRLSLLQYIKNII 692 + + + ++ + + L + IF D V V + E+ NR LL +I Sbjct: 622 YKKLLGSLIKEDKFLEAMESLFEFSSFVNIFMDGVRVCDKMNTELYRNRTRLLVSSVSIY 681 Query: 693 LIVINVQKI 701 V++ KI Sbjct: 682 NTVLDFSKI 690 >gi|317012780|gb|ADU83388.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Lithuania75] Length = 701 Score = 425 bits (1094), Expect = e-116, Method: Composition-based stats. Identities = 193/731 (26%), Positives = 326/731 (44%), Gaps = 68/731 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKCALEVGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNNEDKTQGLNALGLGFYQKLGLKDPKHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-QPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKTHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F T Sbjct: 237 KELETKHQIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAT 296 Query: 293 RTREGV-----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 +++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + Sbjct: 297 FSQKSQEESPTLYNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYENDLKKPLDN 355 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 + L+ L L +M R ++ K ++ Sbjct: 356 APLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYAPSLN-------------MPLEKA 399 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P Sbjct: 400 LELIGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAP 459 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-S 526 +P++ S V+L+ KLD+L + ++ + PSGSKDP+ALRR + G+++II ++ L + Sbjct: 460 LPSSVFSAIVALSLKLDSLFSLFSAGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKA 519 Query: 527 QFIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 L F +R + D +I ++L +++ I+ + Sbjct: 520 DLKNLFEKVGVYQSFDLEILEKFLLERFHNLI---DCNPSIIRSVLNTNERDIVKIIQKV 576 Query: 575 KHLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 K L F K + + KR+ I + +N S S E L+ Sbjct: 577 KALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSGFSISLFKELQEHALFEA 633 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 FDAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQ 688 Query: 691 IILIVINVQKI 701 L + ++++I Sbjct: 689 SFLEIGDIKEI 699 >gi|332673814|gb|AEE70631.1| glycyl-tRNA synthetase beta subunit [Helicobacter pylori 83] Length = 700 Score = 425 bits (1093), Expect = e-116, Method: Composition-based stats. Identities = 193/730 (26%), Positives = 328/730 (44%), Gaps = 67/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGTIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQEIKEEFFGPPVKIACNHQDKMQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHHIIVEIDRDLLDEVVAITEYPSVLLGEFDKAFLKLPSEIITTSMKENQRYFAA 296 Query: 293 RTREGV----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + + Sbjct: 297 FNQKSQESPTLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDNA 355 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L+ L L +M R ++ K + ++ + Sbjct: 356 PLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYASSLN-------------MPLEKAL 399 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 400 ELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPL 459 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQ 527 P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ ++ L + Sbjct: 460 PSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAHYGLEFDLKAD 519 Query: 528 FIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L F +R + D +I ++L +++ I+ +K Sbjct: 520 LKNLFEKVGVYQSFDLEVLEKFLLERFNNLI---DCNPSIIRSVLNTNERDIVKIIQKVK 576 Query: 576 HLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L F K + + KR+ I + +N S E S E L+ Sbjct: 577 ALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSEFSISLFKELQEHALFEAF 633 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 NAIKTSAFESLDSK-----IEAYFGLHVPLEEYFKSVLVMDKDVEIQKNRKNFLWGVYQS 688 Query: 692 ILIVINVQKI 701 L + ++++I Sbjct: 689 FLEIGDIKEI 698 >gi|254995439|ref|ZP_05277629.1| glycyl-tRNA synthetase beta chain (glyS) [Anaplasma marginale str. Mississippi] Length = 693 Score = 425 bits (1093), Expect = e-116, Method: Composition-based stats. Identities = 187/729 (25%), Positives = 338/729 (46%), Gaps = 71/729 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D +LE+ E++P + A E + + + + + T HR+ L +S Sbjct: 3 SDLILEVLCEQLPTKTIKSAHEYILPRIDKEFSSRRISCDAPKVFTTSHRIILIACNVSQ 62 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 +S + +E GPR+ + K+ I GFLR G + + +I+ +K Y + + + Sbjct: 63 NSSDGKKEIKGPRISSDKEVISGFLRKVGKSGVEELEIQVSGEK--FYYSSSVLSSKDLT 120 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 + L ++ I+ P K MRW T W+RP+ ++LC+L K++ + + Sbjct: 121 NELTEVIQCMIENFPLHKRMRWGTGTGY-----WVRPVINVLCVL-----DGKVLPVSVA 170 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 I N+T+G+ + V + Y+ L E MV++D E RR IL + S L Sbjct: 171 GITANNVTFGNLRFSNRKYTVTKAEEYLNFLSENMVIVDVEARRKHILEQLNEQISGTEL 230 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 ++ +LE++ +E+ +V +GS DK + +P E++ + +Q+ + + G + Sbjct: 231 TYDQNAQILEDMSSNLEYPKVLIGSVDKNFSEIPTEVVSCVMTHHQRYLAIKDQNGKIVK 290 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 S + +++ + +V+ ARL DAL K+D+ Sbjct: 291 FASAASVV-----NNMVIKNHEKVLRARLSDALFLIKKDKE------------------- 326 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-VDRAIVLSKA 420 +D + L VVF + +GT ++ RI L K + I L +RA ++SKA Sbjct: 327 -HNMDYYVGLLS--GVVFKSGLGTLLDKAERISALAKYCSVWIPRSSMLNTERAAMISKA 383 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T +VREFPELQGKIG+ YA E C AIEEH P G ++ P + I I VS+A Sbjct: 384 DLATLVVREFPELQGKIGRYYAKHSGEEEEVCVAIEEHYLPIGQKDHCPKSPIGIAVSIA 443 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DK+D+L+ A E SGS+DP+ALRR ++ ++R+++EN + IPL + Sbjct: 444 DKVDSLVGLMA-TENISGSRDPFALRRTSISLLRVMIENSVSIPLDLMVSKAVSMYMCKA 502 Query: 532 ------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ++ F +DRLK+ L + D+ ++++AI+ ++ + Sbjct: 503 RLNKNEGRFLRVDRDALISTILSFCYDRLKVILKESDLDKEVVDAIVGT-LHDIPIVKKK 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + F + KG+ + + +R I++ E + ++ + + + + E +LY I Sbjct: 562 VEVICSFLKTEKGKSVITAYRRANNIISK-ESFDWKLDGKSNKRLCKEDCEIQLYNQIQH 620 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD-DREVRDNRLSLLQYIKNII 692 + + + ++ + + L + IF D V V + E+ NR LL +I Sbjct: 621 YKKLLGSLIKEDKFLEAMESLFEFSSFVNIFMDGVRVCDKMNTELYRNRTRLLVSSVSIY 680 Query: 693 LIVINVQKI 701 V++ KI Sbjct: 681 NTVLDFSKI 689 >gi|88606787|ref|YP_504651.1| glycyl-tRNA synthetase, beta subunit [Anaplasma phagocytophilum HZ] gi|88597850|gb|ABD43320.1| glycyl-tRNA synthetase, beta subunit [Anaplasma phagocytophilum HZ] Length = 701 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 192/737 (26%), Positives = 348/737 (47%), Gaps = 76/737 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D + EI E++P++M A L + + + +N R + +R+ +GL Sbjct: 1 MSLDLVFEILCEQMPSKMMDIALGYLKNTICSGFSKFAIESRNSRTLVSANRICFIAEGL 60 Query: 60 SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR- 118 + + +E GPRV + +++I GFLR G + + +++ + + Y +V Sbjct: 61 EQGNSTENKEIKGPRVSSSQESIAGFLRKVGKSEVGELEVR-NIGGVEFYYSVRESVGVN 119 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 + + + I+ A+ P K M+W W+RP+ ++ C+L E ++ + Sbjct: 120 NLNEKVCEILQDAVDNFPLHKRMKWGCGIG-----EWVRPVLNVACVLGGE-----VVPV 169 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 + NITYG+ A P + +D Y+ L E MV+LD E RR +IL + Sbjct: 170 TVAGSKANNITYGNIRFAKTPHTINGVDSYLSFLSENMVMLDHEERRRSILRQLDEQIAG 229 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 L+ ++EE+ G++E+ +V +GS D+K++ LP E++ + +Q+C G Sbjct: 230 TLLKYDVHDKIIEELNGMLEYPKVLLGSVDEKFMSLPREVVACVLTKHQRCLAIYDSSGR 289 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 + + S I +++ + V+ ARL DA+ ++D+ Sbjct: 290 IVKFASVASVI-----NERVIKIHEMVLRARLSDAMFLIEKDKQYG-------------- 330 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALVDRAIVL 417 LD+ +L ++VF +G+ ++V+RI L K + + A + V+RA +L Sbjct: 331 ------LDRYREQL--ANIVFKRDLGSVLDKVNRISALAKYASVWVPRAHMLEVERASLL 382 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SKADL + +V+EFPELQGK+G+ YA E + CDA+EEH P + P++ + I + Sbjct: 383 SKADLASLMVKEFPELQGKMGRYYAQHAGEESAVCDALEEHYLPSSQQDRCPSSPVGIAL 442 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS----------- 526 S+ADK+DTL+ A E+ SGS+DP+ALRR + ++R+I EN I IPL Sbjct: 443 SIADKVDTLVGLMA-TERISGSRDPFALRRTAIALLRVIKENCISIPLDLMVSKSVSFYL 501 Query: 527 -QFIEDQNL----------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++++L + F ++RLK+ L + + D++ ++ E ++L Sbjct: 502 CDAKKNKDLKSVFRSVDVDCITSLILDFCYERLKIILREEGLDRDIVNIVV-GEFHDILL 560 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE----KKNREISLEISPQYLLLEAEK 625 + L+E+ + G+ L + +RI +L K+ R S + + E Sbjct: 561 VKKKAVILSEYLKTEDGKNILAAYRRIRNVLLKGSSVPVKEKRIWYKWCSEKLCIESCEI 620 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD-DREVRDNRLSL 684 LY I + + + D L ++ + F D+V V+ D E R NR++L Sbjct: 621 ELYRKAKHCDGVISSVLKAHSFKEAMDCLANMSSVVNDFLDKVRVHDDGSIETRKNRVNL 680 Query: 685 LQYIKNIILIVINVQKI 701 ++ ++ VI+ KI Sbjct: 681 SLWVVSLYNSVIDFSKI 697 >gi|56417270|ref|YP_154344.1| glycyl-tRNA synthetase beta chain [Anaplasma marginale str. St. Maries] gi|56388502|gb|AAV87089.1| glycyl-tRNA synthetase beta chain [Anaplasma marginale str. St. Maries] Length = 694 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 187/729 (25%), Positives = 334/729 (45%), Gaps = 70/729 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D +LE+ E++P + A E + + + + + T HR+ L +S Sbjct: 3 SDLILEVLCEQLPTKTIKSAHEYILPRIDKEFSSRRISCDVPKVFTTSHRIILIACNVSQ 62 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 +S + +E GPR+ + K+ I GFLR G + + +I++ Y + + + Sbjct: 63 NSSDGKKEIKGPRISSDKEVISGFLRKVGKSGVEELEIREVSG-EKFYYSSSVLSSKDLT 121 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 D L ++ I+ P K MRW T W+RP+ ++LC+L K++ + + Sbjct: 122 DELTEVIQCMIENFPLHKRMRWGTGTGY-----WVRPVINVLCVL-----DGKVLPVSVA 171 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 I N T+G+ + V Y+ L E MV++D E RR IL S L Sbjct: 172 GITANNRTFGNLRFSNRKYTVTKAAEYLNFLSENMVIVDVEARRKHILEQLSEQISGTEL 231 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 ++ +LE++ +E+ +V +GS DK + +P E++ + +Q+ + + G + Sbjct: 232 TYDQNAQILEDMSSNLEYPKVLIGSVDKNFSEIPTEVVSCVMTNHQRYLAIKDQSGKIVK 291 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 S + +++ + +V+ ARL DAL K+D+ Sbjct: 292 FASAASVV-----NNMVIKNHEKVLRARLSDALFLIKKDKE------------------- 327 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-VDRAIVLSKA 420 +D + L VVF + +GT ++ RI L K + I L +RA ++SKA Sbjct: 328 -HNMDYYVGLLS--GVVFKSGLGTLLDKAERISALAKYCSVWIPRSSMLNTERAAMISKA 384 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T +VREFPELQGKIG+ YA E C AIEEH P G ++ P + I I VS+A Sbjct: 385 DLATLVVREFPELQGKIGRYYAKHSGEEEEVCVAIEEHYLPIGQKDHCPKSPIGIAVSIA 444 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DK+D+L+ A E SGS+DP+ALRR ++ ++R+++EN + IPL + Sbjct: 445 DKVDSLVGLMA-TENISGSRDPFALRRTSISLLRVMIENSVSIPLDLMVSKAVSMYMCKA 503 Query: 532 ------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ++ F +DRLK+ L + D+ ++++AI+ ++ + Sbjct: 504 RLNKNEGRFLRVDRDALISTILSFCYDRLKVILKESDLDKEVVDAIVGT-LHDIPIVKKK 562 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + F + KG+ + + +R I++ E + ++ + + + + E +LY I Sbjct: 563 VEVICSFLKTEKGKSVITAYRRANNIISK-ESFDWKLDGKSNKRLCKEDCEIQLYNQIQH 621 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD-DREVRDNRLSLLQYIKNII 692 + + + ++ + + L + IF D V V + E+ NR LL +I Sbjct: 622 YKKLLGSLIKEDKFLEAMESLFEFSSFVNIFMDGVRVCDKMNTELYRNRTRLLVSSVSIY 681 Query: 693 LIVINVQKI 701 V++ KI Sbjct: 682 NTVLDFSKI 690 >gi|261839755|gb|ACX99520.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori 52] Length = 701 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 193/731 (26%), Positives = 327/731 (44%), Gaps = 68/731 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+EI+ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHHIIVETDRDLLDEIVAITEYPSALLGEFDKAFLKLPNEIITTSMKENQRYFAA 296 Query: 293 RTREGV-----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 +++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + Sbjct: 297 FSQKSQEESPTLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDN 355 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 + L+ L L +M R ++ K ++ Sbjct: 356 APLESVVFVQGLG---TLKDKMERESIIAQYLTQKYAPSLN-------------MPLEKA 399 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P Sbjct: 400 LELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAP 459 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-S 526 +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ + L + Sbjct: 460 LPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAHYGLGFDLKA 519 Query: 527 QFIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 L F +R + D +I ++L +++ I+ + Sbjct: 520 DLKNLFEKVGVYQSFDLEVLEKFLLERFNNLI---DCNPSIIRSVLNTNERDIVKIIQKV 576 Query: 575 KHLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 K L F K + + KR+ I + +N S E S E L+ Sbjct: 577 KALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSEFSTSLFKELQEHALFEA 633 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + T E +D K + S+ P+E +F VLV D E++ NR + L + Sbjct: 634 FNAIKTSAFEGLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQ 688 Query: 691 IILIVINVQKI 701 L + ++++I Sbjct: 689 SFLEIGDIKEI 699 >gi|188527791|ref|YP_001910478.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Shi470] gi|238691937|sp|B2UUB6|SYGB_HELPS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|188144031|gb|ACD48448.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Shi470] Length = 700 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 188/730 (25%), Positives = 325/730 (44%), Gaps = 67/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGKIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAG------KKAI----DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V + + GF + GL+ Q +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNELGLGFYQKLGLKDHQHFQTAFKNNNEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R+ IL + Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKRKAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPNEIIITSMKENQRYFAA 296 Query: 293 RTREGV----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D + + Sbjct: 297 FNQKSQESPTLHNGFIVVSNAISKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDNA 355 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L+ L L +M R ++ K + ++ + Sbjct: 356 PLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYASSLN-------------MPLEKAL 399 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 400 ELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPL 459 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQ 527 P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I++ ++ L + Sbjct: 460 PSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVVHYGLEFDLKAD 519 Query: 528 FIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L F +R + D +I ++L ++ I+ +K Sbjct: 520 LKNLFEKVGVYQSFDLEVLEKFLLERFNNLI---DCNPSIIRSVLNTNERGIVKIIQKVK 576 Query: 576 HLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L F K + + KR+ I + +N S E E L+ Sbjct: 577 ALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSEFFISLFKESQEHALFEAF 633 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 NAIKTSTFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQS 688 Query: 692 ILIVINVQKI 701 L + ++++I Sbjct: 689 FLEIGDIKEI 698 >gi|308062285|gb|ADO04173.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Cuz20] Length = 700 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 191/730 (26%), Positives = 325/730 (44%), Gaps = 67/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGKIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYFAA 296 Query: 293 RTREGV----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D + + Sbjct: 297 FNQKSQESPTLHNGFIVVSNAISKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDNA 355 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L+ L L +M R ++ K + ++ + Sbjct: 356 PLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYASSLN-------------MPLEKAL 399 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 400 ELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPL 459 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQ 527 P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ ++ L + Sbjct: 460 PSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAHYGLEFDLKAD 519 Query: 528 FIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L F +R + D +I ++L ++ I+ +K Sbjct: 520 LKNLFEKVGVYQSFDLEILEKFLLERFNNLI---DCNPSIIRSVLNTNERGIVKIIQKVK 576 Query: 576 HLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L F K + + KR+ I + +N S E E L+ Sbjct: 577 ALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSEFFISLFKESQEHALFEAF 633 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 NAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQS 688 Query: 692 ILIVINVQKI 701 L + ++++I Sbjct: 689 FLEIGDIKEI 698 >gi|315586911|gb|ADU41292.1| glycyl-tRNA synthetase beta subunit [Helicobacter pylori 35A] Length = 700 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 192/730 (26%), Positives = 327/730 (44%), Gaps = 67/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ IV ++ + + KSMRW + S+IRP+ +I + E+ Sbjct: 125 IHAK-EPTKDLIMPIVLEFLEGLNFGKSMRWGSVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIRVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAA 296 Query: 293 RTREGV----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + + Sbjct: 297 FNQKSQESPTLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDNA 355 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L+ L L +M R ++ K ++ + Sbjct: 356 PLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYAPSLN-------------MPLEKAL 399 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 400 ELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALEQNENELVALSVKEQYLPASENAPL 459 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQ 527 P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ ++ L + Sbjct: 460 PSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAHYGLEFDLKAD 519 Query: 528 FIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L F +R + D +I ++L +++ I+ +K Sbjct: 520 LKNLFEKVGVYQKFDLEVLEKFLLERFNNLI---DCNPSIIRSVLNTNERDIVKIIQKVK 576 Query: 576 HLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L F K + + KR+ I + +N S E E L+ Sbjct: 577 ALKRFLDDPKNAQKKELLFSTFKRLANI---NKDRNPNESSEFFISLFKESQEHALFEAF 633 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 NAIKTSTFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQS 688 Query: 692 ILIVINVQKI 701 L + ++++I Sbjct: 689 FLEIGDIKEI 698 >gi|317011207|gb|ADU84954.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori SouthAfrica7] Length = 709 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 190/739 (25%), Positives = 333/739 (45%), Gaps = 76/739 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--------YQNMRQYWTPHRLFL 54 + L+E+ +EE+PA+ +++ L L ++ + +N+ ++TP RL + Sbjct: 5 ELLVEVLTEELPAQALLNEYKEMPKKLHALFQKHALEVRNETQNEARNIEVFYTPRRLCV 64 Query: 55 YLKGLSPHSPEKIEERLGPRV----GAGKKA------IDGFLRSTGLQTISDCQIKKDPK 104 +K + E EE GP + KA GF + GL+ Q Sbjct: 65 LVKDFPLFTKETKEEFFGPPIEIACNNKDKAQGLNALGLGFYQKLGLKDYKHFQSAFKNN 124 Query: 105 KGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILC 164 K +Y A + PK+ ++++ IV ++ + + KSMRW + S+IRP+ +I Sbjct: 125 KEVLYHAKIN-PKQPTKNLIMPIVLEFLESLNFGKSMRWGSVEK-----SFIRPIHNICV 178 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECR 224 + E+ I++ T HR I V S Y LE+ V+LDP+ R Sbjct: 179 LFNGENFNN--IEIKEYGFKTKQATKTHRQEGFDFIGVNSPREYFEVLEKNHVILDPKKR 236 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 IL + L + + + D+DLL+E+I + E+ +G FDK +L LP E+I ++K Sbjct: 237 EEKILQEIKELETKHHIIVEVDRDLLDEVIAITEYPSALLGEFDKAFLKLPSEIITTSMK 296 Query: 285 TNQKCFVTRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 NQ+ F T +EG L N FI+VSN D I+ GN +V+ ARL DA+ F++ Sbjct: 297 ENQRYFATFNQEGQKEGQKLHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYEN 355 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D + + L+ + L +++ ++ + Sbjct: 356 DLKKPLDNAPLESVVFV------QGLGTLRDKMERESIIAQ----------YLTQKYALS 399 Query: 400 IAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 + ++ + L++RAI ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 400 LNMPLEKALELMNRAIKIAKADLLSEVVYEFTELQGIMGYYYALKQNENEWVALSLKEQY 459 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P +P++ S V+L+ KLD+L + ++ + PSGSKDP+ALRR + G+++I+ Sbjct: 460 LPASENAPLPSSVFSAIVALSLKLDSLFSLFSTGKIPSGSKDPFALRRLSFGLLKIVAHY 519 Query: 520 KIDIPLS-------------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 + L Q + + L F +R + D +I ++L + Sbjct: 520 GLKFDLKVDLKNLFEKVGVYQSFDLEILEKFLLERFNNLI---DCNPSIIRSVLNTNERD 576 Query: 567 LLTIVDLIKHLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 ++ I+ +K L F K + + KR+ I + +N + S Sbjct: 577 IVAIIQKVKALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNQTSGFSANLFKEP 633 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 E L+ + T ES+D K + + P+E +F VLV D E++ NR Sbjct: 634 QEHALFKAFNALKTSAFESLDSK-----IEAYFGLHVPLEEYFKSVLVMDKDLEIQKNRK 688 Query: 683 SLLQYIKNIILIVINVQKI 701 + L + L + ++++I Sbjct: 689 NFLWNVYQSFLEIGDIKEI 707 >gi|317180185|dbj|BAJ57971.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori F32] Length = 700 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 193/730 (26%), Positives = 330/730 (45%), Gaps = 67/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKCALEVGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQEIKEEFFGPPVKIACNNEDKTQGLNALGLGFYQKLGLKDHRHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +D++ IV ++ + + KSMRW S+IRP+ +I + ED Sbjct: 125 IHEK-EPTKDLIMPIVLEFLESLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGEDFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVETDRDLLDEVVAITEYPSTLLGEFDKAFLKLPREIIITSMKENQRYFAA 296 Query: 293 RTREGV----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 +++ L N F++VSN D I+ GN +V+ ARL DA+ F++ D + + Sbjct: 297 FSQKSQESSTLHNGFVVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDNA 355 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L+ L L +M R ++ K ++ + Sbjct: 356 PLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYAPSLN-------------MPLEKAL 399 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 400 ELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPL 459 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-- 526 P++ S V+L+ KLD+L + ++ + PSGSKDP+ALRR + G+++I+ ++ L Sbjct: 460 PSSVFSAIVALSLKLDSLFSLFSAGKIPSGSKDPFALRRLSFGLLKIVAHYGLEFDLKAD 519 Query: 527 -----------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 Q + + L F +R + D +I ++L +++ I+ +K Sbjct: 520 LKNLFEKVGVYQSFDLEILEKFLLERFHNLI---DCNPSIIRSVLNTNERDIVKIIQKVK 576 Query: 576 HLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L F K + + KR+ I + +N S E S E L+ Sbjct: 577 ALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSEFSTSLFKELQEHALFEAF 633 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + T E +D K + S+ P+E +F VLV D E++ NR + L + Sbjct: 634 NAIKTSAFEGLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQS 688 Query: 692 ILIVINVQKI 701 L + ++++I Sbjct: 689 FLEIGDIKEI 698 >gi|108563378|ref|YP_627694.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori HPAG1] gi|122386356|sp|Q1CSQ2|SYGB_HELPH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|107837151|gb|ABF85020.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori HPAG1] Length = 701 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 192/731 (26%), Positives = 327/731 (44%), Gaps = 68/731 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L LL + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALLNKRALEAGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP + G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPIKIAFNNEDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHEK-EPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 G--IEVKEYGFKTKQATKVHRQEGFDFIEVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHDIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPNEIITTSMKENQRYFAV 296 Query: 293 RTREGV-----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + Sbjct: 297 FDQKSQEESPTLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDN 355 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 + L+ L L +M R ++ K ++ Sbjct: 356 TPLESVVFVQGLG---TLKDKMEREAIIAQYLTQKYAPSLN-------------MPLEKA 399 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P Sbjct: 400 LELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAP 459 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS- 526 +P++ S V+L+ KLD+L + ++ + PSGSKDP+ALRR + G+++I+ ++ L Sbjct: 460 LPSSVFSAIVALSLKLDSLFSLFSAGKIPSGSKDPFALRRLSFGLLKIVAHYGLEFDLKA 519 Query: 527 ------------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 Q + + L F +R + D +I ++L +++ I+ + Sbjct: 520 DLKNLFEKVGVYQSFDLEILEKFLLERFHNLI---DCNPSIIRSVLNTNERDIVKIIQKV 576 Query: 575 KHLNEFFSSAKGEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 K L F K + + KR+ I + +N S E S E L+ Sbjct: 577 KALKRFLDDPKNAQKKELLFSAFKRLANI---NKDRNPNESSEFSISLFKELQEHALFEA 633 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + T E +D K + + P+E +F VLV D E++ NR + L + Sbjct: 634 FNAIQTSAFEGLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQ 688 Query: 691 IILIVINVQKI 701 L + ++++I Sbjct: 689 SFLEIGDIKEI 699 >gi|313888907|ref|ZP_07822567.1| glycine--tRNA ligase, beta subunit [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845080|gb|EFR32481.1| glycine--tRNA ligase, beta subunit [Peptoniphilus harei ACS-146-V-Sch2b] Length = 576 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 197/615 (32%), Positives = 320/615 (52%), Gaps = 63/615 (10%) Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A + R +++K I+P I+ + +PK+MRW + RP++ ++ +L Sbjct: 2 FAHISSIGRDSAEIIKEIIPGLIKDINFPKNMRWG-----GKNIRFARPIRWVVSLL--- 53 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +K+++ D + I NIT GHRF IK+ +++Y + LE+ V+LD RR I Sbjct: 54 --NDKVVEFDFEGIQVSNITKGHRFLGSSEIKIDKVENYEKLLEDNYVILDQNKRREIIK 111 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 ++ ++A ++G E+ E++DLLEE+ +VE+ GS +KYL LP+E++ T+ + + Sbjct: 112 YESTKIAKSLGGEIHENEDLLEELTYIVEYPTPIKGSIKEKYLSLPKEVVTTTMIDHLRF 171 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 +++G L FI V N D ++ GN +V+ ARLEDA F+ D Sbjct: 172 TPIYSQDGGLLPYFITVRNG-TRDYEDIVIAGNEKVLGARLEDAKFFYDDD--------- 221 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DA 406 +SKPL + L+ V+FH K+GT E+ R V+ KIA+ + D Sbjct: 222 -----------ISKPLVDYVENLN--GVLFHDKLGTMLEKEKRDGVVANKIAESLSFADE 268 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + + R LSKADL T++V EF ELQG IG+ YA+ E AI E P+ + Sbjct: 269 AIDAIKRVAHLSKADLTTKMVIEFTELQGVIGEIYALKSGEKEIVATAIREQYLPKFAGD 328 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + + SLADK+DT+ +AI E P+GS DP+ALRR+ +G+I II N L Sbjct: 329 KLPESSVGSIFSLADKIDTIAGLFAIGEIPTGSTDPFALRRSAIGVINIIRNNSWKFNLD 388 Query: 527 QFIEDQ-------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + +E N+ FF R+K L D IR+D+I+++L PE++ + Sbjct: 389 EAVEASLYEYINDLGLTFNHEEVIANVRDFFLGRIKTMLQDEGIRYDIIDSVLIPESE-I 447 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 I D K LNE+F + + F+ + RI + + LE+ L+ EAEK L Sbjct: 448 HNIFDKAKELNEWFKEDRSK-FVDAYNRINNLTKNVDL------LEVKEDLLVEEAEKDL 500 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 Y + +E++ ++Y + DLL+ + I+ FFD V+V +D +VR+NRL L+ Sbjct: 501 YMKYLEIDGSFKEALAEEKYMEAMDLLNDLVPSIDKFFDNVMVMAEDDKVRENRLGLINR 560 Query: 688 IKNIILIVINVQKIV 702 I+ I ++ ++ IV Sbjct: 561 IEENIQKILKIENIV 575 >gi|88657718|ref|YP_506857.1| glycyl-tRNA synthetase, beta subunit [Ehrlichia chaffeensis str. Arkansas] gi|88599175|gb|ABD44644.1| glycyl-tRNA synthetase, beta subunit [Ehrlichia chaffeensis str. Arkansas] Length = 703 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 199/738 (26%), Positives = 343/738 (46%), Gaps = 77/738 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 MP + L E SEE P MQ A + + L + +++++ + T +RL LY+K + Sbjct: 1 MPLELLFECLSEETPPEMQSSAYAYMDSYIRKELSRCNISFESVKVFVTSNRLTLYVKNI 60 Query: 60 SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL-RKPKR 118 + + GP+V A K AI+GFL+ K D Y A L + Sbjct: 61 INNLSNNTLKIKGPKVSADKIAIEGFLKKVNKNFSDLITCK--IGNDDFYYAELNHNEET 118 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 E ++ +I+ + PW K MRW + W+RP+ +I+CIL K++ + Sbjct: 119 NTEHIILSIIENMLNNFPWDKKMRWGGGKTY-----WVRPILNIMCIL-----DGKVLPI 168 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 +I N + G+RF +V + Y L++ V+L + R N IL+ + Sbjct: 169 KFADIEANNKSCGNRFTNKEFFEVADFNSYNSKLKKNNVILCQKERLNFILHQIKSITEE 228 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 L +++ L+ ++ G +E+ V MGS D+K+ LP+ELI + +QK + Sbjct: 229 SNLICEDNQKLINKLNGTLEYPIVIMGSVDEKFSELPKELILSVMHNHQKYLAVFKEDK- 287 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 FI +S I + I++G++ ++ ARL DA K+D+ Sbjct: 288 -ITNFITISTISNDN----IIKGHNNILNARLLDASFLVKKDKEY--------------- 327 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVL 417 +D + +L +VFHAK+G+ E+V+RI L K I+ I + + V+RA L Sbjct: 328 -----NIDYYIEKLKQ--IVFHAKLGSVFEKVNRIIALSKYISIWIPHSSLIKVERAAKL 380 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL T ++EFPELQG +G YA NE++ ++I H +P P + P++ ISI V Sbjct: 381 SKFDLSTLAIKEFPELQGIMGGYYASYFNESLEISESIVNHYEPTNPQKECPSSPISIAV 440 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRAT------------LGIIRIILENKIDI-- 523 S++DK+D L+ E+ + S+DP+++RR IR+++E + + Sbjct: 441 SISDKIDNLVGMIVAGEQVTSSRDPFSMRRMAISIIRIIIENNLNIPIRLLIEKSVSLYS 500 Query: 524 ----------PLSQFIEDQN--------LILFFHDRLKLYLHDRDIRHDLIEAIL-RPEN 564 L I N +I FF +R K+ L + I+ D+I A+ + Sbjct: 501 FAITERTTINKLKNVISRTNRKKEIISSVIEFFSNRFKIILKEDGIKEDIINAVFESRKF 560 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 NLL I K LN + + G + + + KR+ I+ E N + + + ++ E Sbjct: 561 SNLLLIKTEAKFLNNYIFTKNGVEIIKAYKRLSNIITKGENVNNTAKYKCNKKLFTIKEE 620 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD-DREVRDNRLS 683 LY I+ +I+ + ++ + + L+ + + F D V VN ++E+ NRLS Sbjct: 621 TDLYKEITYQKNNIKRLIKDNKFEESLNNLYKLSCCVNSFMDNVKVNDQTNKELHKNRLS 680 Query: 684 LLQYIKNIILIVINVQKI 701 +++ I +V + KI Sbjct: 681 IVKNAFYIFDLVTDFSKI 698 >gi|307109903|gb|EFN58140.1| hypothetical protein CHLNCDRAFT_141905 [Chlorella variabilis] Length = 1035 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 173/773 (22%), Positives = 306/773 (39%), Gaps = 116/773 (15%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 F+LE+ SEE+P A + L + LL + + + TP RL + + L+ Sbjct: 302 TFVLEVGSEELPPDDVVSALQQLKDRVPALLDRLRLGHGGVTVEGTPRRLAVLVHELAAR 361 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 E GP G A+ GF + G+ + DC + D K + A +++ Sbjct: 362 QSNSSERVRGPPAKVAYDAAGTPSPALLGFCKKNGVT-VEDCFAEVDGKGVEYVWAEVKQ 420 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +VL +P + + + KSMRW S ++ RPL+ +L + E Sbjct: 421 MGRPAAEVLLEELPALLASLSFKKSMRW------RSDTAYSRPLRWLLAL-----HGEAA 469 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G T R +V S D Y+ L++ + L E R+ +I Sbjct: 470 VPFTYACLQAGATTRLLRNADQPEQQVASADAYLSVLQQGRISLGLEARKESIWQAVTAA 529 Query: 236 ASAVGLELVE--DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A VG + + DLLEE+ LVE V +G+FD +L LP E++ L ++ +Q+ F Sbjct: 530 AEGVGGVVPDGTRGDLLEEVANLVESPTVLLGAFDAAFLVLPREVLVLVMRKHQRYFPVY 589 Query: 294 -TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + L F+ V+N + + GN V+ AR EDA F+ D Sbjct: 590 KHQSDELLPYFVTVANGEVDVP--TVQAGNEAVLRARFEDAQFFYNND------------ 635 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVL--GKKIAQLIDADVAL 410 L+ PL RL +F +G+ ++ +R+ L A + V + Sbjct: 636 --------LATPLADARPRL--AGTMFQKDLGSLLDKSARVEQLVPALGAAAGLQDAVPV 685 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA---------------- 454 +A L KADL T +V E L G +G+ YA+ + Sbjct: 686 AVQAAHLCKADLATSMVTEMTALAGTMGRHYALKEGLPAGEPGGRGGWLPPGAGAGLRPG 745 Query: 455 --------------IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSK 500 I E + PR + +P + VS+ADKLD+L+ +A P+ + Sbjct: 746 PEPGSAAAANVAEAIFESVLPRSAGDRLPQTPAGLLVSVADKLDSLVGLFAAGCAPTATA 805 Query: 501 DPYALRRATLGIIRIILENKIDIPLSQFI--------------EDQNLILFFHDRLKLYL 546 DPY LRRA +G+++ +L + L + ++ F RL+ L Sbjct: 806 DPYGLRRAAVGLLQALLAGGTRLDLGTAVAAAAAVQPCAVTPHSQAAVVEFVERRLEQLL 865 Query: 547 HDRD--IRHDLIEAILRPENDNLLTIVDLIKHL--------------NEFFSSAKGE--K 588 D ++ + + A LR + + + +E + G + Sbjct: 866 SDAGVQVQIEAVRAALRERGRDAALAARTAREIRVGMPGAGAGAGPADEMAAGEAGRLHQ 925 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + R ++ K + + + E E+ L+A + M + Sbjct: 926 VMAALARPVRLTR---GKQIDAGWTVQEELFEQEEERALHAAYRQAAAQVTPDMPVPAFL 982 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L + P++ FFD+V V +++ VR NRL+LL+ + + ++++ ++ Sbjct: 983 AAAEPLIA---PLDAFFDKVFVMCEEQAVRQNRLALLRDVAALPAGILDLAEL 1032 >gi|269958340|ref|YP_003328127.1| glycyl-tRNA synthetase beta subunit [Anaplasma centrale str. Israel] gi|269848169|gb|ACZ48813.1| glycyl-tRNA synthetase beta subunit [Anaplasma centrale str. Israel] Length = 694 Score = 419 bits (1076), Expect = e-114, Method: Composition-based stats. Identities = 192/730 (26%), Positives = 338/730 (46%), Gaps = 72/730 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D +LE+ E++P + A E + + +G+ Y + + TP+R+ + Sbjct: 3 SDLVLEVLCEQLPIKTMKVACEYIQPKIDREFINKGISYSTSKTFTTPNRIIFTAYNIDQ 62 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 +E GPRV + +K I GFL+ G ++I + +I++ + Y + + K L Sbjct: 63 SKGSGKKEVKGPRVSSDEKVISGFLKKVGKESIEELEIREFSGEKFYYSSKVLSSKDLTS 122 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 +V ++ I P K MRW W RP+ ++LC++ ++ + + Sbjct: 123 EV-AEVIQCMIDDFPLHKRMRWGVGTGH-----WTRPVINVLCVMDGN-----VLPVSVA 171 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 + NITYG+ A V ++ Y++ L E+MV++D E RR IL + S L Sbjct: 172 GVVANNITYGNLRFANRQHTVTNVVGYLKFLSESMVIVDTEERRKCILEQLNEKISDAKL 231 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 + +LE++ +E+ ++ +GS D+ + +P E++ + +QK + +EG + Sbjct: 232 TYDHNAQMLEDMSSSLEYPKILVGSVDESFSEIPTEVVSCVMVHHQKYVALKNQEGKIVK 291 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 + S + +++ + V+ ARL DAL K+D+ N N S Sbjct: 292 FASVASVV-----NDKVIKNHEMVLRARLSDALFLIKKDKENEMNHYVNLLST------- 339 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-VDRAIVLSKA 420 +VF + +GT ++V R+ L K + I L +RA ++SKA Sbjct: 340 ---------------IVFRSGLGTLLDKVERMSALAKYCSVWIPHSSMLNAERAAMVSKA 384 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T +VREFPELQGK+G+ YA E C AIEEH P G + P + I I VS+A Sbjct: 385 DLATLVVREFPELQGKMGRYYAKHSGEVDDVCLAIEEHYLPTGQNDPCPKSPIGIAVSIA 444 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DK+D+L+ A EK S S+DP+ALRR ++ ++R+I+EN I IPL + Sbjct: 445 DKVDSLVGLMA-TEKISSSRDPFALRRTSISLLRVIIENNISIPLDLIVAKAVSMYTRKA 503 Query: 532 ------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 N++ F ++RLK+ L + D+ ++I+AI+ ++ T+ Sbjct: 504 WLSKNKNHLLSVDRDALTSNVLSFCYERLKVILKESDLDKEVIDAIV-GRFHDIPTVKKK 562 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E+ + +G + + KR + I+ E + + + + E +LY I+ Sbjct: 563 VEVICEYLKTKEGSTVITAYKRAYNIITK-ESVEWKSDVRPNKRLCKECYEVQLYDQINH 621 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD--DREVRDNRLSLLQYIKNI 691 I M ++ + + L + F D V V D + E+ NR+ LL N+ Sbjct: 622 HKKLISILMKGSKFSEAMNSLFEFSSFVNAFMDGVRV-CDRVNTELYRNRVDLLVSSVNV 680 Query: 692 ILIVINVQKI 701 V++ KI Sbjct: 681 YNKVLDFSKI 690 >gi|58617676|ref|YP_196875.1| glycyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Gardel] gi|58417288|emb|CAI28401.1| Glycyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Gardel] Length = 710 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 204/739 (27%), Positives = 355/739 (48%), Gaps = 80/739 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 MP + L E SEE+PA MQ A + + L + + + +++ + T +R+ + + + Sbjct: 9 MPLELLFECLSEEVPAEMQSSAYFYVDSYIKKELNKNNISFSSVKVFVTSNRISVCVSDI 68 Query: 60 SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 +S + + GPRV + K AIDGFL+ G K D Y A + Sbjct: 69 INNSLKNAPKVKGPRVSSDKSAIDGFLKKIGKNFNDLIICK--VGNDDFYYADISNKNET 126 Query: 120 IED-VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 + + VL +I+ + PW K MRW + WIRP+ ++LCIL K++ + Sbjct: 127 LIETVLSSIIENMLHNFPWNKKMRWGNGKTY-----WIRPILNLLCILDG-----KVLPV 176 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 +I N + G+++ +V++ D Y+ L+ + V+L E R N I N L A Sbjct: 177 KFADIEANNKSRGNKYTHKEFFEVKNFDSYVSQLQTSNVILCQEERLNFIFNQIRNLTEA 236 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 L + L+ E+ G++E+ V MG DK++ LP+ELI + QK T + Sbjct: 237 NNLVCENNIKLINELNGILEYPLVIMGHVDKQFSELPKELILSVMHNYQKYLAVFTSDK- 295 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 FI +S+I +I+QG++ V+ ARL DA K+D+ Sbjct: 296 -ITNFITISSIS----NDSILQGHNNVLNARLVDASFLIKKDKEY--------------- 335 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVL 417 +D + +L +VFHAK+G+ E+V+RI L K I+ I + + V+RA L Sbjct: 336 -----SIDYYIEKLK--HIVFHAKLGSIFEKVNRIVALSKYISMWIPHSSLIKVERAAEL 388 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL T V+EFPELQG +G YA E ++I + +P + P++ I+IT+ Sbjct: 389 SKFDLATLAVKEFPELQGIMGGYYASHFGEISEISESIVSYYEPTNSSKKTPSSPIAITL 448 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGII------------RIILENKIDIPL 525 S++DKLDTL+ E+ +GS+DP+++RR + II R+++E + + Sbjct: 449 SISDKLDTLVGMVVAGEQVTGSRDPFSMRRMAISIIRVIIENNINIPIRLLIEKSVSLYS 508 Query: 526 SQFIEDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPE-- 563 ++ +E + ++ F +R K+ L D IR D+I A+L + Sbjct: 509 NRLVERKTIRKIKDVISRTNKKKSIVSYVLEFCSNRFKIMLKDYGIREDVIRAVLDNDKK 568 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +NLL I LN + + G++ + + KR+ I++ + N I + + + Sbjct: 569 FNNLLMIKKEAIVLNSYIDTENGKEIIKAYKRLHNIISKDNVINSII--KCNKKLFSTNE 626 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNV-DDREVRDNRL 682 E LY ++I++ + +K++++ D L+++ + F D + VN ++ + NRL Sbjct: 627 EINLYKETIYQKSNIKKLLKNKKFNESLDNLYNLSCYVNNFMDNIKVNDITNKALYKNRL 686 Query: 683 SLLQYIKNIILIVINVQKI 701 SL++ I +V + KI Sbjct: 687 SLIKTTFYIFNLVTDFNKI 705 >gi|86739982|ref|YP_480382.1| glycine--tRNA ligase [Frankia sp. CcI3] gi|86566844|gb|ABD10653.1| glycyl-tRNA synthetase beta chain [Frankia sp. CcI3] Length = 1017 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 178/747 (23%), Positives = 303/747 (40%), Gaps = 93/747 (12%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 L EI +EE+PA + E + L+ L + + +R TP R+ + ++P Sbjct: 309 ATLLFEIGTEELPAAEVTRTVEAVRAGLVERLAATRLTHGAVRVLGTPRRIVAIVDEVAP 368 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+ GPRV GA KA GF R G + + + V Sbjct: 369 REPDVERVVRGPRVSAAYDAAGAPTKAAVGFARGQGADPAGLQVV--THRGVEHVALVRT 426 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R VL ++ + + ++MRW+ S+ RP++ +L +L E Sbjct: 427 EAGRDAARVLAGVLGELVVGLRAERNMRWNDP-----TLSFSRPVRWLLALL-----GET 476 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + + + G T GHR P+ V S Y L +LLDP RR ++ +A + Sbjct: 477 VVPVTVSTLAAGRTTRGHRRAGSPPLDVPSASGYPELLAARSILLDPVVRRELVVEEAAK 536 Query: 235 LASAVGLELV--EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + G + + D+L E+ LVE+ +GSF++++L LP E++ ++ +Q+ Sbjct: 537 LTADSGGHIDLVAEADVLTEVANLVEFPCPILGSFEERFLDLPAEILTTVMRKHQRYLPV 596 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R G L F+ V++ + A + GN V+ AR DA F+ D Sbjct: 597 RDAAGRLLPSFVAVADGKVDQ--ALVRAGNEDVIRARFTDAAFFYDAD------------ 642 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 ++ PL+ A L + F ++G+ +R RI L + +A+ ID D A Sbjct: 643 --------ITVPLETFRAEL--AKLTFEQRLGSVADRADRIAALARDLAEEIDLGEDDRA 692 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA L+K DL T++V E L G + +EYA E + A+ E PR + +P Sbjct: 693 TLDRAAALAKFDLATQMVIELSSLAGTMAREYARRAGEPEAVAVALFEMELPRRAGDQLP 752 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN---------- 519 ++LAD+LD L+ +A++ P+GS DP+ LRRA LG+ I+ Sbjct: 753 DTAPGGLLALADRLDLLVGLFALDAAPTGSSDPFGLRRAALGVAAILGSRPELAGLTVTG 812 Query: 520 ---------KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + + F R L D + H L+ A+ P Sbjct: 813 ALARAARLTPVPVSAEALEAAET---FVRGRYVQQLLDTGVDHRLVGAV-GPLTGTPARA 868 Query: 571 VDLIKHLNEFFSSA-----KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 + L + + +R+ +I+ + Q L AE Sbjct: 869 AATLVTLRQLVQGESAPAAGFAALAAALQRVRRIVPAG------TPAVLDAQRLTEPAEI 922 Query: 626 RLYAVISDFGTHIQESMDHKRYHQ-------IGDLLH----SICEPIEIFFDQVLVNVDD 674 L V++ + S D L + ++ FFD V+V DD Sbjct: 923 DLLEVVTALVRRLASSGADSAVTAETAAGAISLDELVVAAGDLPAAVDAFFDAVMVMADD 982 Query: 675 REVRDNRLSLLQYIKNIILIVINVQKI 701 VR RL LL +I+++ ++ + + Sbjct: 983 PAVRAARLGLLAWIRDLTTGALDWEAL 1009 >gi|88608720|ref|YP_506631.1| glycyl-tRNA synthetase, beta subunit [Neorickettsia sennetsu str. Miyayama] gi|88600889|gb|ABD46357.1| glycyl-tRNA synthetase, beta subunit [Neorickettsia sennetsu str. Miyayama] Length = 696 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 199/734 (27%), Positives = 334/734 (45%), Gaps = 80/734 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI SEE+P +Q A + + K+ + + + + R+ + + + Sbjct: 1 MHKFLLEILSEEMPVALQSYAQKSFFDLFSSATKD--LSVGKIEVFTSCRRIAVLIDDVK 58 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + ++ GP VG+ ++ F S G T K + Y A + I Sbjct: 59 SDLVNQKVDKKGPSVGSDLSVVERFATSMGASTADLYL--KSIGNKEYYFAPVAGKVLHI 116 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +D+++ ++ WP+SMRW + +WIRP+KSI+C+L + II + Sbjct: 117 DDIMRQRTEAILRSFSWPRSMRWGNY-----SLNWIRPIKSIVCML-----GKSIIPVQF 166 Query: 181 KEIPCGNITYGHR-FHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 G IT G A IK+ S + Y L + V+L R N I +L + Sbjct: 167 HHYTAGAITVGPYVDPALQKIKITSAEEYQSILMKGGVILSQIERENLIKEQISQLEAEH 226 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G + ++LL E++G+ E V +GSF + +L L E +I I ++QK F ++ G L Sbjct: 227 GFSVCVTEELLNEVVGITESPNVLLGSFPQSFLELHERIIETVIVSHQKVFPV-SKNGKL 285 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 N F+ VS+I G A ++G RV+ ARL DA A + Sbjct: 286 LNKFVFVSSI----AGDAPIRGYERVITARLADA--------------------ASMVLI 321 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVLS 418 D PL + +L ++FH K+G+ E+V R+R L K IA + +A + V+ A L+ Sbjct: 322 DSKNPLRELSPKLKQ--LIFHKKLGSFSEKVQRVRALAKFIAFWVPNASIIKVEEAAKLA 379 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENI-SCCDAIEEHLKPRGPLENVPTNKISITV 477 K DL T VR+FP+L G +G L E DA+ +H P + PT +++T+ Sbjct: 380 KLDLLTTFVRDFPKLAGFMGSHCLSLCGETDVEIIDAVRDHYLPVDAADICPTAPVTVTL 439 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ-FIEDQNL-- 534 +LADK+DTL+ ++ EK + ++DP +RRA +G++RII+ENK+D+PL ++ +L Sbjct: 440 ALADKIDTLVGLISVKEKVTSTRDPLGIRRAAIGVLRIIIENKLDVPLQVFLMKAIDLYP 499 Query: 535 -----------------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 + FF +RLK L + + ++ Sbjct: 500 SSLFFSLIKKIGASSDEEKQRKDDVVNFTLSFFSERLKALLFKSGVSQAVFASV-SSGVT 558 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + + ++E+ A+G +F+ KR+ IL + + S + L+L E Sbjct: 559 RPLVLTEKCIAISEWLKQAEGAEFMRLHKRMMGILK---GFSGSAKAKFSKKVLVLPEEV 615 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L F + ++ + + + +PI +F D VLVNV+D E++ NR+ LL Sbjct: 616 SLVQEFEGFQSLFCNAIKERNFEMAFSRCADLLKPITVFMDSVLVNVEDPELKKNRIGLL 675 Query: 686 QYIKNIILIVINVQ 699 I + + N Sbjct: 676 LSISETLNELCNFD 689 >gi|256375180|ref|YP_003098840.1| glycyl-tRNA synthetase, beta subunit [Actinosynnema mirum DSM 43827] gi|255919483|gb|ACU34994.1| glycyl-tRNA synthetase, beta subunit [Actinosynnema mirum DSM 43827] Length = 987 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 169/732 (23%), Positives = 291/732 (39%), Gaps = 86/732 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 L EI +EE+P + + + + L + + + TP R+ + + + P Sbjct: 307 TLLFEIGAEELPPHEVTRTTQAVREAVAAKLAATRLAVGEVAAHGTPRRVVVVVPDVQPR 366 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ GPRV G KA GF R G+ ++ + + Sbjct: 367 EPDAERTARGPRVSAAFDADGNPTKAAQGFARGQGVDVSELGRVVE--NGVEHVALTRTV 424 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +VL ++ + ++ K+M+WS S+ RP++ +L +L + Sbjct: 425 AGRGAVEVLSGVLGEVVTELRAEKNMKWSDPK-----LSFTRPVRWLLALL-----GDTP 474 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + + G T HR ++V S D Y L V+L + RR I+ A L Sbjct: 475 VPVVASALASGTTTRVHRTADQPVVEVSSADGYREFLAGHGVVLSADERRAEIVRRAQEL 534 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A++VG + D +L+E+ LVE +GSF+ YL LP +++ ++ +Q+ R Sbjct: 535 AASVGGSVDLD-GVLDEVTNLVEQPTPILGSFNADYLELPAQILTTVMRKHQRYLPVRAA 593 Query: 296 EG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L F+ V+N + + + GN V+ AR EDA FW+ D Sbjct: 594 GGEGAAGSLLPHFVAVANGEVDE--DLVRAGNEAVLRARYEDAAFFWRAD---------- 641 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 L PL+ LD + F K+G+ +R +RI L +++A+++ A Sbjct: 642 ----------LRTPLETMKGGLD--KLTFADKLGSMSDRSARIAALAERLAEVVGAGDET 689 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA L+K DL +++V E L G + +EYAV E A+ E PR + +P Sbjct: 690 LRRAGELAKFDLGSQMVIELSSLAGTMAREYAVRAGETPEVAQALYEMELPRSAGDAMPA 749 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN----------- 519 + +SL D+ D L +A P+GS DP+ LRRA LG + ++ Sbjct: 750 STAGALLSLGDRFDLLAGLFATGANPTGSSDPFGLRRAALGAVSVLRHFPELRAITLSAA 809 Query: 520 ----------KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + + F R + L D H + A+L D Sbjct: 810 LELAAAGLPEGVALSAEALEGARE---FAVRRYEQQLLDAGHDHRHVNAVLVL-ADAPAV 865 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + L + + +R+ +I+ S P L AE L+ Sbjct: 866 ADETLAELTALVGDEAFTALVAALQRVRRIVPAG------TSGGYDPSALREPAELALHE 919 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + + P+ FFD VLV ++ E+R RL LL I+ Sbjct: 920 ALGSVKPDGEGL------AAFVAAATPLTGPVNRFFDDVLVMAEEPELRAARLGLLATIR 973 Query: 690 NIILIVINVQKI 701 ++ V+ Q++ Sbjct: 974 DLAAPVLAWQEL 985 >gi|58579621|ref|YP_197833.1| glycyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Welgevonden] gi|58418247|emb|CAI27451.1| Glycyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Welgevonden] Length = 710 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 202/739 (27%), Positives = 353/739 (47%), Gaps = 80/739 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 MP + L E SEE+PA MQ A + + L + + + +++ + T +R+ + + + Sbjct: 9 MPLELLFECLSEEVPAEMQSSAYFYVDSYIKKELNKNNISFSSVKVFVTSNRISVCVSDI 68 Query: 60 SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 +S + + GPRV + K A+DGFL+ G K D Y A + Sbjct: 69 INNSLKNAQRVKGPRVSSDKSAVDGFLKKVGKNFNDLIICK--VGNDDFYYADISNKNET 126 Query: 120 IED-VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 + + VL +I+ + PW K MRW + WIRP+ ++LCIL K++ + Sbjct: 127 LIETVLSSIIENMLHNFPWNKKMRWGNGKTY-----WIRPILNLLCIL-----DGKVLPV 176 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 +I N + G+++ +V++ D Y+ L+ + V+L E R N I N L A Sbjct: 177 KFADIEANNKSRGNKYTHKEFFEVKNFDSYVSQLQNSNVILCQEERLNFIFNQIRNLTEA 236 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 L + L+ E+ G++E+ V MG DK++ LP+ELI + QK T + Sbjct: 237 NNLVCENNIKLINELNGILEYPLVIMGHVDKQFSELPKELILSVMHNYQKYLAVFTSDK- 295 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 FI +S+I +I+QG++ V+ ARL DA K+D+ Sbjct: 296 -ITNFITISSIS----NDSILQGHNNVLNARLVDASFLIKKDKEY--------------- 335 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVL 417 +D + +L +VFHAK+G+ E+V+RI L K I+ I + + V+RA L Sbjct: 336 -----SIDYYIEKLK--HIVFHAKLGSIFEKVNRIVALSKYISMWIPHSSLIKVERAAEL 388 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL T V+EFPELQG +G YA E ++I + +P + P++ I+IT+ Sbjct: 389 SKFDLATLAVKEFPELQGIMGGYYASHFGEIPEISESIVSYYEPTNSSKKTPSSPIAITL 448 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGII------------RIILENKIDIPL 525 S++DKLDTL+ E+ +GS+DP+++RR + II R+++E + + Sbjct: 449 SISDKLDTLVGMVVAGEQVTGSRDPFSMRRMAISIIRVIIENNINIPIRLLIEKSVSLYS 508 Query: 526 SQFIEDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPE-- 563 ++ +E + ++ F +R K+ L D IR D+I A+L + Sbjct: 509 NRLVEGKTIRKIKDVISRTNKKKSIVSYVLEFCSNRFKIMLKDYGIREDVIRAVLDNDKK 568 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +NLL I LN + + G++ + + KR+ I++ + N I + + + Sbjct: 569 FNNLLMIKKEAIVLNSYIDTENGKEIIKAYKRLHNIISKDNVINSII--KCNKKLFSTNE 626 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNV-DDREVRDNRL 682 E L +I++ + +K++++ D L+++ + F D + VN ++ + NRL Sbjct: 627 EINLCKETIYQKGNIKKLLKNKKFNESLDNLYNLSCYVNNFMDNIKVNDVTNKALYKNRL 686 Query: 683 SLLQYIKNIILIVINVQKI 701 SL++ I +V + KI Sbjct: 687 SLIKTTFYIFNLVTDFNKI 705 >gi|57238742|ref|YP_179878.1| glycyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Welgevonden] gi|57160821|emb|CAH57719.1| glycyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Welgevonden] Length = 702 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 202/739 (27%), Positives = 353/739 (47%), Gaps = 80/739 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 MP + L E SEE+PA MQ A + + L + + + +++ + T +R+ + + + Sbjct: 1 MPLELLFECLSEEVPAEMQSSAYFYVDSYIKKELNKNNISFSSVKVFVTSNRISVCVSDI 60 Query: 60 SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 +S + + GPRV + K A+DGFL+ G K D Y A + Sbjct: 61 INNSLKNAQRVKGPRVSSDKSAVDGFLKKVGKNFNDLIICK--VGNDDFYYADISNKNET 118 Query: 120 IED-VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 + + VL +I+ + PW K MRW + WIRP+ ++LCIL K++ + Sbjct: 119 LIETVLSSIIENMLHNFPWNKKMRWGNGKTY-----WIRPILNLLCIL-----DGKVLPV 168 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 +I N + G+++ +V++ D Y+ L+ + V+L E R N I N L A Sbjct: 169 KFADIEANNKSRGNKYTHKEFFEVKNFDSYVSQLQNSNVILCQEERLNFIFNQIRNLTEA 228 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 L + L+ E+ G++E+ V MG DK++ LP+ELI + QK T + Sbjct: 229 NNLVCENNIKLINELNGILEYPLVIMGHVDKQFSELPKELILSVMHNYQKYLAVFTSDK- 287 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 FI +S+I +I+QG++ V+ ARL DA K+D+ Sbjct: 288 -ITNFITISSIS----NDSILQGHNNVLNARLVDASFLIKKDKEY--------------- 327 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVL 417 +D + +L +VFHAK+G+ E+V+RI L K I+ I + + V+RA L Sbjct: 328 -----SIDYYIEKLK--HIVFHAKLGSIFEKVNRIVALSKYISMWIPHSSLIKVERAAEL 380 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL T V+EFPELQG +G YA E ++I + +P + P++ I+IT+ Sbjct: 381 SKFDLATLAVKEFPELQGIMGGYYASHFGEIPEISESIVSYYEPTNSSKKTPSSPIAITL 440 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGII------------RIILENKIDIPL 525 S++DKLDTL+ E+ +GS+DP+++RR + II R+++E + + Sbjct: 441 SISDKLDTLVGMVVAGEQVTGSRDPFSMRRMAISIIRVIIENNINIPIRLLIEKSVSLYS 500 Query: 526 SQFIEDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPE-- 563 ++ +E + ++ F +R K+ L D IR D+I A+L + Sbjct: 501 NRLVEGKTIRKIKDVISRTNKKKSIVSYVLEFCSNRFKIMLKDYGIREDVIRAVLDNDKK 560 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +NLL I LN + + G++ + + KR+ I++ + N I + + + Sbjct: 561 FNNLLMIKKEAIVLNSYIDTENGKEIIKAYKRLHNIISKDNVINSII--KCNKKLFSTNE 618 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNV-DDREVRDNRL 682 E L +I++ + +K++++ D L+++ + F D + VN ++ + NRL Sbjct: 619 EINLCKETIYQKGNIKKLLKNKKFNESLDNLYNLSCYVNNFMDNIKVNDVTNKALYKNRL 678 Query: 683 SLLQYIKNIILIVINVQKI 701 SL++ I +V + KI Sbjct: 679 SLIKTTFYIFNLVTDFNKI 697 >gi|330813968|ref|YP_004358207.1| glycyl-tRNA synthetase beta chain [Candidatus Pelagibacter sp. IMCC9063] gi|327487063|gb|AEA81468.1| glycyl-tRNA synthetase beta chain [Candidatus Pelagibacter sp. IMCC9063] Length = 503 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 188/539 (34%), Positives = 287/539 (53%), Gaps = 37/539 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+YSEEIP +Q +++ L+E Y+ + TP RL + + GL Sbjct: 1 MAQFLLELYSEEIPHGLQIDTRKNIESSFKKKLEEFSTSYKKFSVFSTPTRLCVSIDGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 H +E GP+VG+ ++A+ GFL+S L+ +K KG Y ++ K + Sbjct: 61 SHLSVPSKEIKGPKVGSPEQALIGFLKSNQLEQKD--VFEKTIDKGSFYFIKTKQQKIDL 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 + +L T VP +Q + W KSMRW+ + SW RPLKSI C+L + I+ + Sbjct: 119 QQLLATTVPEILQSLNWKKSMRWADHN-----LSWGRPLKSIFCLL-----DKHTINFNF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + N Y + I ++S + Y + L++ V+LD + R IL+ + Sbjct: 169 HHLSSCNKIYVGAIYDEKNITIKSAEQYFQVLKDKNVVLDQDVREKMILSSLTSIFKKSK 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 E + L+EE+ LV+ GSF +L LPEEL+ LT+ +Q+ F ++ G + Sbjct: 229 CEDNPNLRLVEEVTNLVDHPTALKGSFSADFLVLPEELLNLTMMQHQRYFPMKSLETGKI 288 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 N FI +SN Q D I+ GN RV+ ARL DA FW +++ Sbjct: 289 TNSFITISNNQ--DEKKLIIDGNERVLQARLSDAKFFWDKNRR----------------- 329 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L + +++L+ + F+ +GT ++ R+R L IA +I A+ + A + K Sbjct: 330 ---QNLVKNVSKLN--GITFYKDLGTLYDKTQRVRQLASLIADIIGANKGDAEIAASICK 384 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL T++V E+PELQG IGK +A+ Q + +AI EH P GP + VP +KI+I V+L Sbjct: 385 ADLVTDLVGEYPELQGVIGKYFAMSQGFSPEIANAISEHYLPLGPSDKVPKDKIAICVAL 444 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF 538 ADKLDTLI F+ I KP+ SKDP+ALRRA LG+IRI++ENK+ I L + I + +F Sbjct: 445 ADKLDTLIGFFGIGLKPTSSKDPFALRRAVLGMIRIVIENKLSISLKELINNAKKFIFI 503 >gi|317014380|gb|ADU81816.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Gambia94/24] Length = 701 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 192/720 (26%), Positives = 326/720 (45%), Gaps = 68/720 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ +++ L L ++ + N+ ++TP RL L++K + E EE GP Sbjct: 16 PAQALLNEYKEMPKKLHALFQKRALEVGNIEVFYTPRRLCLFVKDFPLLTQETKEEFFGP 75 Query: 74 RVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 V G A+ GF + GL+ Q K +Y A + + +D+ Sbjct: 76 PVKIACNNQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAKIHAK-QPTKDL 134 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 + IV ++ + + KSMRW S+IRP+ +I + E+ + I++ Sbjct: 135 IMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFND--IEVKGYGF 187 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 T HR I+V S Y LE+ V+LDP+ R IL + L + + Sbjct: 188 KTKQATKAHRQEGFDFIEVDSPKAYFEILEKNHVILDPKKREAKILQEIKGLEKKHDIIV 247 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV----- 298 D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F T +++ Sbjct: 248 EMDRDLLDEVVAITEYPTVLLGEFDKAFLKLPSEIITTSMKENQRYFATFSQKSQEESPT 307 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + + L+ Sbjct: 308 LHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYENDLKKPLDNAPLESVVFVQG 366 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 L L +M R ++ K + ++ + LV RA+ ++ Sbjct: 367 LG---TLKDKMERESIIAQYLTQKYISSLN-------------MPLEKALELVKRAVQIA 410 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EF ELQG +G YA+ QNEN +++E P +P+N S V+ Sbjct: 411 KADLLSEVVYEFSELQGIMGYYYALEQNENELVALSVKEQYLPASENAPLPSNVFSAIVA 470 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQFIEDQN---- 533 L+ K+D+L + +++ + PSGSKDP+ALRR + G+++II ++ L + Sbjct: 471 LSLKIDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKADLKNLFEKVGV 530 Query: 534 --------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 L F +R + D +I ++L +++TI+ +K L F K Sbjct: 531 YQSFDLEILEKFLLERFNNLI---DCNPSIIRSVLNTNERDIVTIIQKVKALKRFLDDPK 587 Query: 586 GEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + KR+ I + +N E S + E L+ + T ES Sbjct: 588 NAQKKELLFSAFKRLANI---NKDRNPNEKSEFSTRLFKEPKEHALFEAFNAIKTSAFES 644 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D K + S+ P+E +F VLV D E++ NR + L + L + ++++I Sbjct: 645 LDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWDVYQSFLEIGDIKEI 699 >gi|195953956|ref|YP_002122246.1| glycyl-tRNA synthetase, beta subunit [Hydrogenobaculum sp. Y04AAS1] gi|195933568|gb|ACG58268.1| glycyl-tRNA synthetase, beta subunit [Hydrogenobaculum sp. Y04AAS1] Length = 666 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 177/728 (24%), Positives = 325/728 (44%), Gaps = 92/728 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN-MRQYWTPHRLFLYLKGL 59 M D LLE+ +EE+P+ KA E L I+I LK++ + + + TP R+ + ++ L Sbjct: 1 MNDILLELQTEELPSLFLLKANETLKDIVISFLKDKNIEKDKTISLFTTPRRIGILIENL 60 Query: 60 SPHSPEKIEERLGPR------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 H+ ++ +GP G KA++ FL+ + +K G Sbjct: 61 PDHNKKEEILVIGPPYEACYKDGVPTKALEAFLKKNNASLEETFKYEKQ--GGVYIAIKK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + IE++ K I+ + + K MRW S+ + RP++ I +L Sbjct: 119 QTGGIPIEELFKEFPDFIIKSLNYKKMMRWDN-----SSMRFPRPIRGIALVLNDRPI-- 171 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +P N + GHRF + ++ Y L++ V+ + R++ IL+ Sbjct: 172 ---------LPYKNTSKGHRFLSNE-FVIEHAKAYEELLKKHYVIPTFKERKSIILDLVL 221 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A + + +++L++EI LVE+ + +G F+K++L LP+ +I+ + + + F+T Sbjct: 222 SKAKELNVTPDYEEELIDEITNLVEYPYIVIGEFEKEFLSLPDIVIKTVL-AHHQKFITT 280 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G + N F +SNI+ D I G +VV ARL DA+ F+ D Sbjct: 281 KKDG-ITNIFFGISNIE--DKKGYIKNGYQKVVKARLRDAIFFYNED------------- 324 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L KP + L ++FH K+GT ++ R + + +D +++ R Sbjct: 325 -------LKKPFHFFVEELK--GIMFHHKLGTLFDKTKRHI----ALGEYLDHQNSVLIR 371 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A LS D+ T +V+EF ELQG +G Y +NE+ A+ E P + + K Sbjct: 372 ACELSLFDIATNMVKEFDELQGYMGMIYVKAKNEDEELSKALLEQYMPDKIEG-IQSTKT 430 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + + K D +++ A E P G+ D Y ++R GII+ IL++++DI L + Sbjct: 431 GALLGIIVKSDNIVSLIAAGEIPKGTSDAYGIKRNIYGIIKTILDHELDINLEELFGKVF 490 Query: 532 ----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLI 574 ++ F RL Y + +D++ A+L + + I + I Sbjct: 491 ELLENKEKLLSYEEILSHIKNLFKTRLNTYFEEY--PYDIVRAVLEVEDPLKVKDIKNKI 548 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L+ + E + KRI +IL + +I + + EK LY ++ D Sbjct: 549 ELLS--SNRDIVENIAKAYKRIRKILPKDFS-----PKDIKQELFESDLEKELYKILEDI 601 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 D + ++ + + + I+ FFD++LV ++ +VR+NRLSLL I + Sbjct: 602 K-------DKELSKELLEYIDHKKKIIDEFFDKILVMAENIDVRNNRLSLLYNIYKSLKQ 654 Query: 695 VINVQKIV 702 + + + +V Sbjct: 655 IADFEHVV 662 >gi|307637660|gb|ADN80110.1| Glycyl-tRNA synthetase beta chain [Helicobacter pylori 908] gi|325996260|gb|ADZ51665.1| Glycyl-tRNA synthetase beta chain [Helicobacter pylori 2018] Length = 701 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 190/720 (26%), Positives = 325/720 (45%), Gaps = 68/720 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ +++ L L ++ + N+ ++TP RL L++K + E EE GP Sbjct: 16 PAQALLNEYKEMPKKLHALFQKRALEVGNIEVFYTPRRLCLFIKDFPLLTQETKEEFFGP 75 Query: 74 RVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 V G A+ GF + GL+ Q K +Y A + + +D+ Sbjct: 76 PVKIACNHQDKTQGLNALGLGFYQKLGLKDHQCFQTAFKNNKEVLYHAKIHAK-QPTKDL 134 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 + IV ++ + + KSMRW S+IRP+ +I + E+ + I++ Sbjct: 135 IMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFND--IEVKEYGF 187 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 T HR I+V S Y LE+ V+LDP+ R IL + L + + + Sbjct: 188 KTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEIKELETKHHIIV 247 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV----- 298 D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F ++ Sbjct: 248 EMDRDLLDEVVAITEYPTVLLGEFDKAFLKLPSEIITTSMKENQRYFAIFNQKSQEESPT 307 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + + L+ Sbjct: 308 LHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYENDLKKPLDNAPLESVVFVQG 366 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 L L +M R ++ K + ++ + LV RA+ ++ Sbjct: 367 LG---TLKDKMERESIIAQYLTQKYASSLN-------------MPLEKALELVKRAVQIA 410 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EF ELQG +G YA+ QNEN +++E P +P++ S V+ Sbjct: 411 KADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPLPSSVFSAIVA 470 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------------ 526 L+ K+D+L + +++ + PSGSKDP+ALRR + G+++II ++ L Sbjct: 471 LSLKIDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKADLKNLFQKVGV 530 Query: 527 -QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 Q + + L F +R + D +I ++L +++TI+ +K L F K Sbjct: 531 YQSFDLEILEKFLLERFNNLI---DCNPSIIRSVLNTNERDIVTIIQKVKALKRFLDDPK 587 Query: 586 GEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + KR+ I + +N E E L+ + T ES Sbjct: 588 NAQKKELLFSAFKRLANI---NKDRNPNEKSEFFTHLFKEPKEHALFEAFNAIKTSAFES 644 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D K + S+ P+E +F VLV D E++ NR + L + L + ++++I Sbjct: 645 LDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWDVYQSFLEIGDIKEI 699 >gi|15605530|ref|NP_220316.1| glycyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX] gi|290463313|sp|P0CE22|SYG_CHLTR RecName: Full=Glycyl-tRNA synthetase; Short=GlyRS; Includes: RecName: Full=Glycyl-tRNA synthetase alpha subunit; AltName: Full=Glycine--tRNA ligase alpha subunit; Includes: RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit gi|3329262|gb|AAC68391.1| Glycyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX] Length = 1003 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 171/734 (23%), Positives = 307/734 (41%), Gaps = 88/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTI--------SDCQIKKDPKKGD 107 + E+ GP + G+ + F S GL S + D Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGLSISHRSALDQPSAIWRVRSINGTD 433 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 434 YLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY- 487 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 ----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERRA- 542 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + + + + + L++E + L E V FD + LP+EL+ + +Q Sbjct: 543 IIKQGLQNLTGDQIVAIAPEHLIDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQHQ 602 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F T+ +G + N F++V + +D IV+GN + +A RL D +K+D Sbjct: 603 RYFPTQNMQGEITNRFLIVCDNSPTDS---IVEGNEKALAPRLTDGNFLFKQD------- 652 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++ SR+++ ++ L+ Sbjct: 653 -------------LLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPLC 697 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 698 AKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLGS 757 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ + + + Sbjct: 758 SISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDIE 815 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-ND 565 L F RL+ L ++I +L Sbjct: 816 DLFARLIRHFPSSIPNTVWSPEAVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCPK 875 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL-LLEAE 624 N LTI+ + + E ++ + R+ +ILA +S ++ Q L AE Sbjct: 876 NPLTIIQSAQSIQELKNTQILKTIAAMYNRLKKILA-------SLSFSVTEQMFSLQSAE 928 Query: 625 KRLY-AVISDFGTHIQES-MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 L+ + F + K Y + L E F D V V DD R+ R+ Sbjct: 929 DLLFKQALDRFVEETTALPISSKDYLHLLKELAQSTEL---FLDSVRVASDDESTRNQRI 985 Query: 683 SLLQYIKNIILIVI 696 +LL + Sbjct: 986 ALLIAAQKCFGFYA 999 >gi|15611973|ref|NP_223624.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori J99] gi|11135458|sp|Q9ZKM9|SYGB_HELPJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|4155477|gb|AAD06479.1| GLYCYL-TRNA SYNTHETASE BETA CHAIN [Helicobacter pylori J99] Length = 701 Score = 412 bits (1058), Expect = e-112, Method: Composition-based stats. Identities = 187/720 (25%), Positives = 323/720 (44%), Gaps = 68/720 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ +++ L L ++ + N+ ++TP RL L++K + E EE GP Sbjct: 16 PAQALLNEYKEMPKKLHALFQKRALEVGNIEVFYTPRRLCLFVKDFPLLTQETKEEFFGP 75 Query: 74 RVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 V G A+ GF + GL+ Q K +Y A + + +D+ Sbjct: 76 PVKIACNNQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKSNKEVLYHAKIHAK-QPTKDL 134 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 + IV ++ + + KSMRW S+IRP+ +I + E+ + I++ Sbjct: 135 IMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFND--IEIKEYGF 187 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 T HR I+V S Y LE+ V+LDP+ R IL + L + + Sbjct: 188 KTKQATKAHRQEGFDFIEVDSPKAYFEVLEKNHVILDPKKREAKILQEIKGLEKKHDIIV 247 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV----- 298 D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F ++ Sbjct: 248 EVDRDLLDEVVAITEYPTALLGEFDKAFLKLPSEIITTSMKENQRYFAIFNQKSQEESPT 307 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D + + L+ Sbjct: 308 LHNGFIVVSNAISKD-KQKIILGNQKVLKARLSDAVFFYENDLKKPLDNAPLESVVFVQG 366 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 L L +M R ++ K + + ++ + L+ RAI ++ Sbjct: 367 LG---TLKDKMERESIIAQYLTQKYISSL-------------SMPLEKALELISRAIQIA 410 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EF ELQG +G YA+ QNEN +++E P +P++ S V+ Sbjct: 411 KADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPLPSSVFSSIVA 470 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQFIEDQN---- 533 L+ K+D+L + +++ + PSGSKDP+ALRR + G+++II ++ L + Sbjct: 471 LSLKIDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKADLKNLFEKVGV 530 Query: 534 --------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 L F +R + D +I ++L +++ I+ +K L F + K Sbjct: 531 YQSFDLEVLEKFLLERFHNLI---DCNLSIIRSVLNTNERDIVKIIQKVKALKRFLDNPK 587 Query: 586 GEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + KR+ I + +N S S E L+ + T ES Sbjct: 588 NAQKKELLFSAFKRLANI---NKDRNPNESSGFSTSLFKELQEHALFEAFNAIKTSTFES 644 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D K + + P+E +F VLV D E++ NR + L + L + ++++I Sbjct: 645 LDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQSFLEIGDIKEI 699 >gi|297748924|gb|ADI51470.1| Glycyl-tRNA synthetase [Chlamydia trachomatis D-EC] gi|297749804|gb|ADI52482.1| Glycyl-tRNA synthetase [Chlamydia trachomatis D-LC] Length = 1031 Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats. Identities = 171/734 (23%), Positives = 307/734 (41%), Gaps = 88/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 342 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 401 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTI--------SDCQIKKDPKKGD 107 + E+ GP + G+ + F S GL S + D Sbjct: 402 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGLSISHRSALDQPSAIWRVRSINGTD 461 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 462 YLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY- 515 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 516 ----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERRA- 570 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + + + + + L++E + L E V FD + LP+EL+ + +Q Sbjct: 571 IIKQGLQNLTGDQIVAIAPEHLIDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQHQ 630 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F T+ +G + N F++V + +D IV+GN + +A RL D +K+D Sbjct: 631 RYFPTQNMQGEITNRFLIVCDNSPTDS---IVEGNEKALAPRLTDGNFLFKQD------- 680 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++ SR+++ ++ L+ Sbjct: 681 -------------LLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPLC 725 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 726 AKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLGS 785 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ + + + Sbjct: 786 SISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDIE 843 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-ND 565 L F RL+ L ++I +L Sbjct: 844 DLFARLIRHFPSSIPNTVWSPEAVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCPK 903 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL-LLEAE 624 N LTI+ + + E ++ + R+ +ILA +S ++ Q L AE Sbjct: 904 NPLTIIQSAQSIQELKNTQILKTIAAMYNRLKKILA-------SLSFSVTEQMFSLQSAE 956 Query: 625 KRLY-AVISDFGTHIQES-MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 L+ + F + K Y + L E F D V V DD R+ R+ Sbjct: 957 DLLFKQALDRFVEETTALPISSKDYLHLLKELAQSTEL---FLDSVRVASDDESTRNQRI 1013 Query: 683 SLLQYIKNIILIVI 696 +LL + Sbjct: 1014 ALLIAAQKCFGFYA 1027 >gi|255311632|ref|ZP_05354202.1| glycyl-tRNA synthetase [Chlamydia trachomatis 6276] gi|255317933|ref|ZP_05359179.1| glycyl-tRNA synthetase [Chlamydia trachomatis 6276s] Length = 1003 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 172/734 (23%), Positives = 307/734 (41%), Gaps = 88/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTI--------SDCQIKKDPKKGD 107 + E+ GP + G+ + F S GL S + D Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGLSISHRSALDQPSAIWRVRSINGTD 433 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 434 YLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY- 487 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 ----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERRA- 542 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + + + + + L++E + L E V FD + LP+EL+ + +Q Sbjct: 543 IIKQGLQNLTGDQIVAIAPEHLIDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQHQ 602 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F T+ +G + N F++V + +D IV+GN + +A RL D +K+D Sbjct: 603 RYFPTQNMQGEITNRFLIVCDNSPTDS---IVEGNEKALAPRLTDGNFLFKQD------- 652 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++ SR+++ ++ L+ Sbjct: 653 -------------LLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPLC 697 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 698 AKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLGS 757 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ + + + Sbjct: 758 SISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDIE 815 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-ND 565 L F RL+ L ++I +L Sbjct: 816 DLFARLIRHFPSSIPNTVWSPEAVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNRPK 875 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL-LLEAE 624 N LTI+ + + E ++ + R+ +ILA +S I+ Q L AE Sbjct: 876 NPLTIIQSAQSIQELKNTQILKTIAAMYNRLKKILA-------SLSFSITEQMFSLQSAE 928 Query: 625 KRLY-AVISDFGTHIQES-MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 L+ + F + K Y + L E F D V V DD R+ R+ Sbjct: 929 DLLFKQALDRFVEETTALPISSKDYLHLLKELAQSTEL---FLDSVRVASDDESTRNQRI 985 Query: 683 SLLQYIKNIILIVI 696 +LL + Sbjct: 986 ALLIAAQKCFGFYA 999 >gi|166154138|ref|YP_001654256.1| glycyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|166155013|ref|YP_001653268.1| glycyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335378|ref|ZP_07223622.1| glycyl-tRNA synthetase [Chlamydia trachomatis L2tet1] gi|290463312|sp|B0B923|SYG_CHLT2 RecName: Full=Glycyl-tRNA synthetase; Short=GlyRS; Includes: RecName: Full=Glycyl-tRNA synthetase alpha subunit; AltName: Full=Glycine--tRNA ligase alpha subunit; Includes: RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit gi|165930126|emb|CAP03610.1| glycyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|165931001|emb|CAP06564.1| glycyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 1003 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 172/734 (23%), Positives = 308/734 (41%), Gaps = 88/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTI--------SDCQIKKDPKKGD 107 + E+ GP + G+ + F S GL S + D Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFPSHGLSISHRSALDQPSAICRVRSINGTD 433 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 434 YLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY- 487 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 ----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERRA- 542 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + + + + + L++E + L E V FD + LP+EL+ + +Q Sbjct: 543 IIKQGLQNLTGDQIVAIAPEHLVDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQHQ 602 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F T+ +G + N F++V + +D IV+GN + +A RL D +K+D Sbjct: 603 RYFPTQNMQGEITNRFLIVCDNSPTDS---IVEGNEKALAPRLTDGNFLFKQD------- 652 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++ SR+++ ++ L+ Sbjct: 653 -------------LLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPLC 697 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 698 AKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLGS 757 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 N+ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ + + + Sbjct: 758 NISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDIE 815 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-ND 565 L F RL+ L ++I +L Sbjct: 816 DLFARLIRHFPSSIPNTVWSPEEVLSKLNTFVWGRLRTILSSLGFDKEIIATVLTDNCPK 875 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL-LLEAE 624 N LTI+ + + E ++ + + R+ +ILA +S ++ Q L AE Sbjct: 876 NPLTIIQSAQSIQELKNTQILKTIAATHNRLKKILA-------SLSFSVTEQMFSLQSAE 928 Query: 625 KRLY-AVISDFGTHIQES-MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 L+ + F + K Y + L E F D V V DD R+ R+ Sbjct: 929 DLLFKQALDRFVEETTALPISSKDYLHLLKELAQSTEL---FLDSVRVASDDESTRNQRI 985 Query: 683 SLLQYIKNIILIVI 696 +LL + Sbjct: 986 ALLIAAQKCFGFYA 999 >gi|288916965|ref|ZP_06411337.1| glycyl-tRNA synthetase, beta subunit [Frankia sp. EUN1f] gi|288351674|gb|EFC85879.1| glycyl-tRNA synthetase, beta subunit [Frankia sp. EUN1f] Length = 1027 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 175/728 (24%), Positives = 296/728 (40%), Gaps = 53/728 (7%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 L EI EE+PA + E + L+ L + + + TP R+ + ++P Sbjct: 311 ATLLFEIGVEELPAAEVTRQTEAVRAALVERLAATRLTHGEVLVRGTPRRIVAVVADVAP 370 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+ GP G KA GF+R G ++ + V Sbjct: 371 REPDVERVVRGPRRAAAYDAAGEPTKAATGFVRGQGGDVADLTVVEFR--GVEHVALVRT 428 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +VL ++ + + ++MRW+ S+ RP++ ++ +L Sbjct: 429 DVGRPATEVLAEVLGAVLAGLRAERNMRWNDPE-----LSFSRPVRWVVALL-----GAA 478 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + + + G + GHR PI+V D Y L VLLDP RR I+++A + Sbjct: 479 VVPVAVSTLAAGATSRGHRRAGSPPIEVAGADGYADLLAGHSVLLDPATRRELIVDEAAK 538 Query: 235 LASAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ + D D+L E+ LVE+ + +GSF+++YL LP E++ + +Q+ V Sbjct: 539 LAAEHQGTIDLDLEGDVLAEVTNLVEYPRPVLGSFEQRYLELPAEILTTVMHKHQRYLVV 598 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R G L CF+ +++ + GN V+ AR EDA F+ D Sbjct: 599 RDAAGALLPCFVTIADGAVDVP--LVRAGNEAVLRARFEDAAFFFDADLKVPLATFRAGL 656 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 + L F L + R R+ L V ++GT + L D A +D Sbjct: 657 AKLTFEQRLG-SVADRADRIARLAGVLADRLGT--GEGAATSGGTAAAGGLSPQDRATMD 713 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L+K DL T++V E L G + +EYA E + A+ E PR +P Sbjct: 714 RAGALAKFDLATQMVIELSSLAGTMAREYARRAGEPEAVAVALYEMELPRRAGGVLPQTV 773 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK------------ 520 ++LAD+LD L +A++ P+GS DP+ LRRA LG+ I+ + Sbjct: 774 PGALLALADRLDLLAGLFALDAAPTGSSDPFGLRRAALGVTAILAQRPELAGLAVADMLA 833 Query: 521 -----IDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 I +P+SQ + F R L D + H L+ A+ P + Sbjct: 834 EAAKLIPVPMSQ-EALEQADAFVRGRFTQQLLDTGVDHRLVAAV-APLTARPARATSTVA 891 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L + + RI +I+ + I+ + P + RL ++ Sbjct: 892 ELRVLVEDPSFARLAAAVGRIRRIVPADTAPGIAIADLVDP------VDHRLAQAATELS 945 Query: 636 TH--IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ S ++ E +E FFD V+V ++ +R RL LL I+++ Sbjct: 946 RQLVVRTSGRAPELVDFVAAAAALPEAVEAFFDGVMVMAEEPALRAARLGLLAEIRDVAG 1005 Query: 694 IVINVQKI 701 V++ + Sbjct: 1006 EVLDWDAL 1013 >gi|296436346|gb|ADH18520.1| glycyl-tRNA synthetase [Chlamydia trachomatis G/9768] gi|296438205|gb|ADH20366.1| glycyl-tRNA synthetase [Chlamydia trachomatis G/11074] gi|297140706|gb|ADH97464.1| glycyl-tRNA synthetase [Chlamydia trachomatis G/9301] Length = 1003 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 171/734 (23%), Positives = 307/734 (41%), Gaps = 88/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTI--------SDCQIKKDPKKGD 107 + E+ GP + G+ + F S GL S + D Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGLSISHRSALDQPSAIWRVRSINGTD 433 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 434 YLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY- 487 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 ----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERRA- 542 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + + + + + L++E + L E V FD + LP+EL+ + +Q Sbjct: 543 IIKQGLQNLTGDQIVAIAPEHLIDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQHQ 602 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F T+ +G + N F++V + +D IV+GN + +A RL D +K+D Sbjct: 603 RYFPTQNMQGEITNRFLIVCDNSPTDS---IVEGNEKALAPRLTDGNFLFKQD------- 652 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++ SR+++ ++ L+ Sbjct: 653 -------------LLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPLC 697 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 698 AKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLGS 757 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ + + + Sbjct: 758 SISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDIE 815 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-ND 565 L F RL+ L ++I +L Sbjct: 816 DLFARLIRHFPSSIPNTVWSPEAVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCPK 875 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL-LLEAE 624 N LTI+ + + E ++ + R+ +ILA +S ++ Q L AE Sbjct: 876 NPLTIIQSAQSIQELKNTQILKTIAAMHNRLKKILA-------SLSFSVTEQMFSLQSAE 928 Query: 625 KRLY-AVISDFGTHIQES-MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 L+ + F + K Y + L E F D V V DD R+ R+ Sbjct: 929 DLLFKQALDRFVEETTALPISSKDYLHLLKELAQSTEL---FLDSVRVASDDESTRNQRI 985 Query: 683 SLLQYIKNIILIVI 696 +LL + Sbjct: 986 ALLIAAQKCFGFYA 999 >gi|255349195|ref|ZP_05381202.1| glycyl-tRNA synthetase [Chlamydia trachomatis 70] gi|255503732|ref|ZP_05382122.1| glycyl-tRNA synthetase [Chlamydia trachomatis 70s] Length = 1003 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 171/734 (23%), Positives = 308/734 (41%), Gaps = 88/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADYGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTI--------SDCQIKKDPKKGD 107 + E+ GP + G+ + F S GL S + D Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGLSISHRSALDQPSAICRVRSINGTD 433 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 434 YLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY- 487 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 ----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERRA- 542 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + + + + + L++E + L E V FD + LP+EL+ + +Q Sbjct: 543 IIKQGLQNLTGDQIVAIAPEHLVDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQHQ 602 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F T+ +G + N F++V + +D IV+GN + +A RL D +K+D Sbjct: 603 RYFPTQNMQGEITNRFLIVCDNSPTDS---IVEGNEKALAPRLTDGNFLFKQD------- 652 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++ SR+++ ++ L+ Sbjct: 653 -------------LLAPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPLC 697 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 698 AKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLGS 757 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ + + + Sbjct: 758 SISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDIE 815 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-ND 565 L F RL+ L ++I +L Sbjct: 816 DLFARLIRHFPSSIPNTVWSPEEVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCPK 875 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL-LLEAE 624 N LTI+ + + E ++ + + R+ +ILA +S ++ Q L AE Sbjct: 876 NPLTIIQSAQSIQELKNTQILKTIAATHNRLKKILA-------SLSFSVTEQMFSLQSAE 928 Query: 625 KRLY-AVISDFGTHIQES-MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 L+ + F + K Y + L E F D V V DD R+ R+ Sbjct: 929 DLLFKQALDRFVEETAALPISSKDYLHLLKELAQSTEL---FLDSVRVASDDESTRNQRI 985 Query: 683 SLLQYIKNIILIVI 696 +LL + Sbjct: 986 ALLIAAQKCFGFYA 999 >gi|76789539|ref|YP_328625.1| glycyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|237803227|ref|YP_002888421.1| glycyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] gi|76168069|gb|AAX51077.1| glycyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|231274461|emb|CAX11256.1| glycyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] Length = 1003 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 171/734 (23%), Positives = 307/734 (41%), Gaps = 88/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTI--------SDCQIKKDPKKGD 107 + E+ GP + G+ + F S GL S + D Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGLSISHRSALDQPSAIWRVRSINGTD 433 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 434 YLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY- 487 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 ----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERRA- 542 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + + + + + L++E + L E V FD + LP+EL+ + +Q Sbjct: 543 IIKQGLQNLTGDQIVAIAPEHLIDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQHQ 602 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F T+ +G + N F++V + +D IV+GN + +A RL D +K+D Sbjct: 603 RYFPTQNMQGEITNRFLIVCDNSPTDS---IVEGNEKALAPRLTDGNFLFKQD------- 652 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++ SR+++ ++ L+ Sbjct: 653 -------------LLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPLC 697 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 698 AKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLGS 757 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ + + + Sbjct: 758 SISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDIE 815 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-ND 565 L F RL+ L ++I +L Sbjct: 816 DLFARLIRHFPSSIPNTVWSPEAVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCPK 875 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL-LLEAE 624 N LTI+ + + E ++ + R+ +ILA +S ++ Q L AE Sbjct: 876 NPLTIIQSAQSIQELKNTQILKTIAAMHNRLKKILA-------SLSFSVTEQMFSLQSAE 928 Query: 625 KRLY-AVISDFGTHIQES-MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 L+ + F + K Y + L E F D V V DD R+ R+ Sbjct: 929 DLLFKQALDRFVEETTALPISSKDYLHLLKELAQSTEL---FLDSVRVASDDESTRNQRI 985 Query: 683 SLLQYIKNIILIVI 696 +LL + Sbjct: 986 ALLIAAQKCFGFYA 999 >gi|237805148|ref|YP_002889302.1| glycyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|231273448|emb|CAX10363.1| glycyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] Length = 1003 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 171/734 (23%), Positives = 307/734 (41%), Gaps = 88/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTI--------SDCQIKKDPKKGD 107 + E+ GP + G+ + F S GL S + D Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGLSISHRSALDQPSAIWRVRSINGTD 433 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 434 YLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY- 487 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 ----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERRA- 542 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + + + + + L++E + L E V FD + LP+EL+ + +Q Sbjct: 543 IIKQGLQNLTGDQIVAIAPEHLIDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQHQ 602 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F T+ +G + N F++V + +D IV+GN + +A RL D +K+D Sbjct: 603 RYFPTQNMQGEITNRFLIVCDNSPTDS---IVEGNEKALAPRLTDGNFLFKQD------- 652 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++ SR+++ ++ L+ Sbjct: 653 -------------LLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPLC 697 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 698 AKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLGS 757 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ + + + Sbjct: 758 SISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDIE 815 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-ND 565 L F RL+ L ++I +L Sbjct: 816 DLFARLIRHFPSSIPNTVWSPEAVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCPK 875 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL-LLEAE 624 N LTI+ + + E ++ + R+ +ILA +S ++ Q L AE Sbjct: 876 NPLTIIQSAQSIQELKNTQILKTIAAMHNRLKKILA-------SLSFSVTEQMFSLQSAE 928 Query: 625 KRLY-AVISDFGTHIQES-MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 L+ + F + K Y + L E F D V V DD R+ R+ Sbjct: 929 DLLFKQALDRFVEETTALPISSKDYLHLLKELAQSTEL---FLDSVRVASDDESTRNQRI 985 Query: 683 SLLQYIKNIILIVI 696 +LL + Sbjct: 986 ALLIAAQKCFGFYA 999 >gi|255507412|ref|ZP_05383051.1| glycyl-tRNA synthetase [Chlamydia trachomatis D(s)2923] gi|289525841|emb|CBJ15322.1| glycyl-tRNA synthetase [Chlamydia trachomatis Sweden2] gi|296435421|gb|ADH17599.1| glycyl-tRNA synthetase [Chlamydia trachomatis E/150] gi|296439138|gb|ADH21291.1| glycyl-tRNA synthetase [Chlamydia trachomatis E/11023] Length = 1003 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 169/734 (23%), Positives = 308/734 (41%), Gaps = 88/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADYGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQI--------KKDPKKGD 107 + E+ GP + G+ + F S GL + + D Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGLSISQRSALDQPSAICRVRSINGTD 433 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 434 YLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY- 487 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++I+ + L + G+ ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 ----GDQILPISLGFVSSGSTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERRA- 542 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + + + + + L++E + L E V FD + LP+EL+ + +Q Sbjct: 543 IIKQGLQNLTGDQIVAIAPEHLVDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQHQ 602 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F T+ +G + N F++V + +D IV+GN + +A RL D +K+D Sbjct: 603 RYFPTQNMQGEITNRFLIVCDNSPTDS---IVEGNEKALAPRLTDGNFLFKQD------- 652 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++ SR+++ ++ L+ Sbjct: 653 -------------LLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPLC 697 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 698 AKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLGS 757 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ + + + Sbjct: 758 SISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDIE 815 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-ND 565 L F RL+ L ++I +L Sbjct: 816 DLFARLIRHFPSSIPNTVWSPEEVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCPK 875 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL-LLEAE 624 N LTI+ + + E ++ + + R+ +ILA +S ++ Q L AE Sbjct: 876 NPLTIIQSAQSIQELKNTQILKTIAATHNRLKKILA-------SLSFSVTEQMFSLQSAE 928 Query: 625 KRLY-AVISDFGTHIQES-MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 L+ + F + K Y + L E F D V V DD R+ R+ Sbjct: 929 DLLFKQALDRFVEETAALPISSKDYLHLLKELAQSTEL---FLDSVRVASDDESTRNQRI 985 Query: 683 SLLQYIKNIILIVI 696 +LL + Sbjct: 986 ALLIAAQKCFGFYA 999 >gi|296437277|gb|ADH19447.1| glycyl-tRNA synthetase [Chlamydia trachomatis G/11222] Length = 1003 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 169/734 (23%), Positives = 305/734 (41%), Gaps = 88/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTI--------SDCQIKKDPKKGD 107 + E+ GP + G+ + F S GL S + D Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGLSISHRSALDQPSAIWRVRSINGTD 433 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 434 YLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY- 487 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 ----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERRA- 542 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + + + + + L++E + L E V FD + LP+EL+ + +Q Sbjct: 543 IIKQGLQNLTGDQIVAIAPEHLIDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQHQ 602 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F T+ + + N F++V + +D IV+GN + + RL D +K+D Sbjct: 603 RYFPTQNMQREITNRFLIVCDNSPTDS---IVEGNEKALTPRLTDGNFLFKQD------- 652 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++ SR+++ ++ L+ Sbjct: 653 -------------LLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPLC 697 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 698 AKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLGS 757 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ + + + Sbjct: 758 SISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDIE 815 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-ND 565 L F RL+ L ++I +L Sbjct: 816 DLFARLIRHFPSSIPNTVWSPEAVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCPK 875 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL-LLEAE 624 N LTI+ + + E ++ + R+ +ILA +S ++ Q L AE Sbjct: 876 NPLTIIQSAQSIQELKNTQILKTIAAMYNRLKKILA-------SLSFSVTEQMFSLQSAE 928 Query: 625 KRLY-AVISDFGTHIQES-MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 L+ + F + K Y + L E F D V V DD R+ R+ Sbjct: 929 DLLFKQALDRFVEETTALPISSKDYLHLLKELAQSTEL---FLDSVRVASDDESTRNQRI 985 Query: 683 SLLQYIKNIILIVI 696 +LL + Sbjct: 986 ALLIAAQKCFGFYA 999 >gi|325997849|gb|ADZ50057.1| Glycyl-tRNA synthetase beta chain [Helicobacter pylori 2017] Length = 701 Score = 409 bits (1051), Expect = e-111, Method: Composition-based stats. Identities = 190/720 (26%), Positives = 325/720 (45%), Gaps = 68/720 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ +++ L L ++ + N+ ++TP RL L++K + E EE GP Sbjct: 16 PAQALLNEYKEMPKKLHALFQKRALEVGNIEVFYTPRRLCLFIKDFPLLTQETKEEFFGP 75 Query: 74 RVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 V G A+ GF + GL+ Q K +Y A + + +D+ Sbjct: 76 PVKIACNHQDKTQGLNALGLGFYQKLGLKDHQCFQTAFKNNKEVLYHAKIHAK-QPTKDL 134 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 + IV ++ + + KSMRW S+IRP+ +I + E+ + I++ Sbjct: 135 IMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFND--IEVKEYGF 187 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 T HR I+V S Y LE+ V+LDP+ R IL + L + + + Sbjct: 188 KTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEIKELETKHHIIV 247 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV----- 298 D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F ++ Sbjct: 248 EMDRDLLDEVVAITEYPTVLLGEFDKAFLKLPSEIITTSMKENQRYFAIFNQKSQEESPT 307 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + + L+ Sbjct: 308 LHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYENDLKKPLDNAPLESVVFVQG 366 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 L L +M R ++ K + ++ + LV RA+ ++ Sbjct: 367 LG---TLKDKMERESIIAQYLTQKYASSLN-------------MPLEKALELVKRAVQIA 410 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EF ELQG +G YA+ QNEN +++E P +P++ S V+ Sbjct: 411 KADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPLPSSVFSAIVA 470 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------------ 526 L+ K+D+L + +++ + PSGSKDP+ALRR + G+++II ++ L Sbjct: 471 LSLKIDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKADLKNLFQKVGV 530 Query: 527 -QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 Q + + L F +R + D +I ++L +++TI+ +K L F K Sbjct: 531 YQSFDLEILEKFLLERFNNLI---DCNPSIIRSVLNTNERDIVTIIQKVKALKRFLDDPK 587 Query: 586 GEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + KR+ I + +N E E L+ + T ES Sbjct: 588 NAQKKELLFSAFKRLATI---NKDRNPNEKSEFFTHLFKEPKEHALFEAFNAIKTSAFES 644 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D K + S+ P+E +F VLV D E++ NR + L + L + ++++I Sbjct: 645 LDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWDVYQSFLEIGDIKEI 699 >gi|27904629|ref|NP_777755.1| glycyl-tRNA synthetase beta chain (glycine--tRNA ligase beta chain) (GlyRS) [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29839497|sp|P59573|SYGB_BUCBP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|27904026|gb|AAO26860.1| glycyl-tRNA synthetase beta chain (Glycine--tRNA ligase beta chain) (GlyRS) [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 697 Score = 409 bits (1050), Expect = e-111, Method: Composition-based stats. Identities = 188/730 (25%), Positives = 330/730 (45%), Gaps = 68/730 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + FL+EI +EE+P + A+ + +I K + Y+ + + TP R+ + + + Sbjct: 1 MKNTFLIEIETEELPPKSLKAIAQSFNKQIIEKSKTYYLKYKQTKWFATPRRIAVMILDI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + GP + G + +++ ++ + + KG Sbjct: 61 NTSDTNFYLQTKGPSIKNAFDKLGNPTSIMKFWMQKMNIKIHEITYL--NTNKGSWVTCS 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K+ I+++L + +AI+ + P M+WS + RP+++++ +L E + Sbjct: 119 KITNKKSIQEILIELCRLAIKNISIPTFMKWSNND-----IQFSRPVRNVIMLLNHEIIR 173 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILND 231 ++ + + GH+F + I + Y L V+ D + R++ I Sbjct: 174 N-----NVLGLETNRLLSGHKFMTNNKIILNHAYQYPELLLNSGKVIADYDARKHKIQKH 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A A +V L LLEEI LVEW + + +F K++L LP+E++ I+ Q+C Sbjct: 229 ASIAAQSVNGILKIKTTLLEEITALVEWPTILLATFKKRFLNLPQEILVHIIEKKQRCLP 288 Query: 292 TR-TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 T G + N F++VSNI+ S IV+GN RV+ A+ DA Sbjct: 289 IYSTNNGTILNSFVVVSNIETSY-PNNIVRGNERVIHAQFVDAE---------------- 331 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 F D K L L ++FH +GT ++ RI+ L I++ A+V Sbjct: 332 ----FFFKKDTKKKLIDYKPLLK--KIIFHDTLGTLLDKTHRIKKLITWISKFTHANVND 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSK DL T + EFPE QG IG YA+ E + AI+E +P+ +N+P+ Sbjct: 386 CIRAADLSKCDLVTNMTFEFPECQGIIGMYYALHDLEPKNIAIAIKEQYQPKFSKDNLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGS-KDPYALRRATLGIIR------------IIL 517 N IS +++LADK+DTL ++IN+ + S KDP++LRR GI+R +L Sbjct: 446 NTISYSLALADKIDTLTGLFSINKNYNISEKDPFSLRRLATGIMRIIIKKNIHINLYDLL 505 Query: 518 ENKI----DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 E + I S I + + F +R+ H +I++IL L I Sbjct: 506 EKSLKTYKKINNSDIILKKEI-QFLFNRIYSIYDKNKYNHSIIKSILENNTKILTNIDPK 564 Query: 574 IKHLNEFFSS--AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 IK + F + + +++ KR+ IL ++ IS I+ + L E +L + Sbjct: 565 IKAITYVFKNHPKILQNLIITQKRVSNILKQFKEN---ISFNINMKTLEQIEEIKLIEQL 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + Y + L+S C+ I FF++V++N +++NRL++L I+N+ Sbjct: 622 NIIEKKYKHPFSKETYISMMLTLNSFCQLIHEFFNKVMINHKIVSIKNNRLAILFKIQNL 681 Query: 692 ILIVINVQKI 701 + N I Sbjct: 682 FFTISNFSNI 691 >gi|325923864|ref|ZP_08185468.1| glycyl-tRNA synthetase beta chain [Xanthomonas gardneri ATCC 19865] gi|325545651|gb|EGD16901.1| glycyl-tRNA synthetase beta chain [Xanthomonas gardneri ATCC 19865] Length = 690 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 164/651 (25%), Positives = 277/651 (42%), Gaps = 104/651 (15%) Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 D+L I+ AI +P PK MRW +++ RP++ ++ + + +I Sbjct: 74 PPADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLF-----GDAVIPA 123 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 +L + +T GHRF + + + Y+ L A VL+D + RR I+ + A Sbjct: 124 ELLGVRGDRLTRGHRFMHQGEVSLAAPGDYVEALRAAHVLVDADARRARIVEEVEAAAKQ 183 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 G +D L++++ LVEW + SF++ +L +P+E + T++ NQK F G Sbjct: 184 AGGSARISEDNLQQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQKFFPVLDAGGK 243 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L FI ++NI + D +G RV+ R DA F+ D Sbjct: 244 LTEQFIGIANIVSKDVAEVA-KGYERVIRPRFADAKFFFDED------------------ 284 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 L + L+ A L V + AK+GT ++V+R+ L + IA + AD RA L+ Sbjct: 285 --LKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEVIAPQVGADPVQARRAAELA 340 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL + +V EFPELQG G+ YA E AI+E +PR +++ + + ++ Sbjct: 341 KNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDIALSPLGKVLA 400 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 +A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L I+ Sbjct: 401 IAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLLDLIKKAVGLVSS 460 Query: 532 -----------------------------------------QNLILFFHDRLKLYLHDRD 550 + F DRL+ Y D+ Sbjct: 461 ALASSQASKQQTAAEAAKTQGVNVAQRQSGGLWVPNVEATAAEIFDFILDRLRGYYADKG 520 Query: 551 IRHDLIEAILRPEN--------------------DNLLTIVDLIKHLNEFFSSAKGEKFL 590 + A+ + +L I + F + + E Sbjct: 521 LPATHFNAVAALFSVAPEGAPTALGVGAHLGATHGSLYDFDRRIDAIGIFATLPEAEALA 580 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + KRI IL K EI +I L AE+ L + +++ Y + Sbjct: 581 AANKRIRNILR---KVEGEIPGDIDTSLLREPAEEALAEAVEAAIGDTGDALHRHDYVAV 637 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ + Sbjct: 638 LARLARLRPQVDAFFDGVMVNAEDAQLRANRLALLKKLGDRLGSVAAIEHL 688 >gi|251771355|gb|EES51936.1| Glycyl-tRNA synthetase, beta subunit [Leptospirillum ferrodiazotrophum] Length = 734 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 187/752 (24%), Positives = 322/752 (42%), Gaps = 98/752 (13%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLE+ EE+PA + L+ ++ L+E+G + + P RL + + GL P + Sbjct: 17 LLEVGCEELPAGSVSDVLDSLARLVRAGLEEKGASFSGIFSGGIPSRLVVRIDGLLPETS 76 Query: 65 EKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E GP V A A+ GF R+ ++ +G R P Sbjct: 77 AREELVTGPPVSAAGGWPSDPSPAVRGFARAQNATPEDLEVVE--TPRGRYLSLRKRLPS 134 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++L I A+ + + KSMRW + P ++RPL IL + ++++ Sbjct: 135 LPVFEILPGIFQGALSSLTFAKSMRWGRGNGP-----FLRPLLWILALYR-----DEVVG 184 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA---HR 234 + G +T R+ P+ V+++ HY ++ + V L RR+ I ND R Sbjct: 185 FEFAGQVSGRLTAPPRYRGSSPVLVRNVVHYDSEVRDWGVELSLARRRDRIENDLILAMR 244 Query: 235 LASAVGLELVE-----DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + + G + D LL+E+ LVE +V + +++ +P ++R +K +Q+ Sbjct: 245 MEESAGTWPDDLTLSLDPQLLDEVTCLVENYRVIPATLPERFSGIPAPVVRTVLKVHQRF 304 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 FV + G F+ VS ++ + + G RVVAARLEDA ++ RD Sbjct: 305 FVADSGAGRPVAHFLGVSGNPTAE-LSVVRDGYVRVVAARLEDAAYYISRD--------- 354 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-- 407 ++ PL R+ LD VVF +G+ G++V R L ++ L+ Sbjct: 355 -----------VAVPLSDRVPGLD--SVVFFPGVGSVGDKVRATRRLLFEVLALLPDGLI 401 Query: 408 ----------VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQ--------NENI 449 A+ +RA +L KADL T +V+EFPEL+G++G+ Y + + + Sbjct: 402 ARHHTTREDLAAICERAAILYKADLLTGLVKEFPELEGEVGRYYFLREVEKGGEITPLDR 461 Query: 450 SCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRAT 509 + +AI H PR + VP + S+ +SL D+ + PSGS DP+ALRR+ Sbjct: 462 AVAEAIASHYAPRTFRDPVPEDLPSLLLSLCDRAVGQAGAFLGGANPSGSLDPFALRRSG 521 Query: 510 LGIIRIILENKIDIPLSQFIE------------------DQNLILFFHDRLKLYLHDRDI 551 LG++RI+ E + + LS+ + L+ F+ DR++ Sbjct: 522 LGLVRILAEGALPLTLSKLADLALEAWGLSSPPKPLSETSPALVAFWEDRMESLFTRDGA 581 Query: 552 RHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS 611 A L E ++ L+EF SA F R+ +IL+ E + Sbjct: 582 SAWYGAARLSDEP--PFLSWRRLEFLSEFLLSADFGAFETVKTRVDRILSGE-------N 632 Query: 612 LEISPQYLLLEAEKRLYAVISDFGTH-IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 P + + E+ L+ ++ + + L + IE FF VLV Sbjct: 633 SSFDPALIAVSEERALWESLAALEKTPFPHDPTREDFFTEVLRLKPLLPVIEAFFSAVLV 692 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 N D VR NR +LL + + + ++ ++V Sbjct: 693 NDPDPGVRRNRQALLAILSGRLSVFGHLDRLV 724 >gi|124514351|gb|EAY55864.1| Glycyl-tRNA synthetase, beta subunit [Leptospirillum rubarum] Length = 739 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 188/726 (25%), Positives = 296/726 (40%), Gaps = 93/726 (12%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLEI EE+PA + E + + L ++ + + R + TP RL L L+ L Sbjct: 21 LLEIGCEELPAGVLPSLREAMEVRARSLRQDFRLGPGSARVFGTPSRLILLLENLPEEQA 80 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 E GP A GF RS G+ I + +I+K +G+ Sbjct: 81 PFRETVFGPPARLAGTLPDAPSPQALGFARSQGVA-IQEIRIEK-TPRGEYLAVDKTLEA 138 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R DVL + P + +P PK+MRW + P ++RP+ ++ + +D Sbjct: 139 RKTSDVLLELFPQTLDNLPLPKTMRWGSGEGP-----FLRPVLWVVAFW-----GNQPLD 188 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + + G T RF P V+ + HY+ LEE + DP R I D Sbjct: 189 VRIAGVLSGTTTRSPRFTGFLPRPVRGISHYVTLLEEWGIEADPVKRGEKIEKDLDLSLR 248 Query: 238 --------AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A G+ D L EE+ LVE +V GSF + YL LP ELI+ ++ +Q+ Sbjct: 249 MEQDVGKIAPGVVRRPDAGLTEEVRDLVESYRVIAGSFPEHYLDLPPELIQTVLRVHQRF 308 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 +V +G L+N F+ +S +D + G +VV ARLEDA ++ RD+ Sbjct: 309 YVLEKPDGTLSNRFLAISGNPGADAN-LVQAGFEKVVRARLEDAQYYLNRDR-------- 359 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI----- 404 ++PL ++ LD +VF +GT +++ R L I + + Sbjct: 360 ------------ARPLSSYISDLD--GMVFFPGVGTLSDKIRMARELSGWILEHVPEKEV 405 Query: 405 -------DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNEN--------- 448 +D L+KADL T +VREF EL+G IG Y + ++ Sbjct: 406 SATGLSRGEMAESLDSLCALAKADLATGLVREFTELEGVIGASYWLAEHREILSRDGKEA 465 Query: 449 ---ISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYAL 505 AI EH +PR + +P +SL DK+ + A P+GS DPYAL Sbjct: 466 RRIHLESAAIREHYRPRHAQDVLPETLPGRILSLVDKVLHQVGALAAGFVPTGSMDPYAL 525 Query: 506 RRATLGIIRIILENKIDIPLSQFIEDQ-----------NLILFFHDRLKLYLHDRDIRHD 554 RRA G+I ++ E I LS + +L F+ +RL Y +R+ Sbjct: 526 RRAANGMIALLRETGWPIGLSAMLAKTRTLVPGKDPSADLEKFWKERLVSYW-EREYPST 584 Query: 555 LIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI 614 L+ L ++ + + L E + + R+ IL+ E +R + Sbjct: 585 LVRIALVDFSETVWRTGSRLAFLKEALGRPEAPSLVALHTRLSNILSGE---DRGPTPRP 641 Query: 615 SPQYLLLEAEKRLYAVISDF----GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 P AEK L+ + GT E + + I +P+ F+ V+V Sbjct: 642 DPTLFQQSAEKDLFRLAEKAGLLDGTGWSEKALNGDWEGIWKASLVFVDPVGTLFETVMV 701 Query: 671 NVDDRE 676 N D Sbjct: 702 NDPDPA 707 >gi|297380170|gb|ADI35057.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori v225d] Length = 674 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 188/703 (26%), Positives = 313/703 (44%), Gaps = 61/703 (8%) Query: 27 IILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAG------KK 80 L L + + N+ ++TP RL L +K + E EE GP V + Sbjct: 3 KKLHALFNKRALEVGNIEIFYTPRRLCLLVKDFPLLTQETKEEFFGPPVKIACNHQDKTQ 62 Query: 81 AI----DGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVP 136 + GF + GL+ Q K +Y A + +D++ IV + + Sbjct: 63 GLNELGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAKIHAK-EPTKDLIMPIVLEFLGGLN 121 Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 + KSMRW S+IRP+ +I + E+ I++ T HR Sbjct: 122 FGKSMRWGNVEK-----SFIRPIHNICVLFNGENFNG--IEVKEYGFKTKQATKAHRQEG 174 Query: 197 PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGL 256 I+V S Y LE+ V+LDP+ R IL + L + + + DKDLL+E++ + Sbjct: 175 FDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEIKELETKHHIIVEIDKDLLDEVVAI 234 Query: 257 VEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV----LANCFILVSNIQAS 312 E+ +G FDK +L LP E+I ++K NQ+ F ++ L N FI+VSN + Sbjct: 235 TEYPSALLGEFDKAFLKLPNEIITTSMKENQRYFAVFNQKSQESPTLHNGFIVVSNAISK 294 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 D I+ GN +V+ ARL DA+ F++ D + + L+ L L +M R Sbjct: 295 D-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDNAPLESVVFVQGLG---TLKDKMERE 350 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 ++ K + ++ L+ RA+ ++KADL +E+V EF E Sbjct: 351 AIIAQYLTQKYASSLN-------------MPLEKAFELIGRAVRIAKADLLSEVVYEFSE 397 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA+ QNEN +++E P +P++ S V+L+ KLD+L + ++ Sbjct: 398 LQGIMGYYYALKQNENELVALSVKEQYLPASENAPLPSSVFSAIVALSLKLDSLFSLFSA 457 Query: 493 NEKPSGSKDPYALRRATLGIIRII----LENKIDIPLSQFIEDQNLIL-FFHDRLKLYLH 547 + PSGSKDP+ALRR + G+++I+ LE + L E + F + L+ +L Sbjct: 458 GKIPSGSKDPFALRRLSFGLLKIVAHYELEFDLKADLKNLFEKVGVYQSFDLEVLEKFLL 517 Query: 548 DR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK----FLLSAKRIFQ 598 +R D +I ++L ++ I+ +K L F K + + KR+ Sbjct: 518 ERFNNLIDCNPSIIRSVLNTNERGIVKIIQKVKALKRFLDDPKNAQKKELLFSAFKRLAN 577 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 I + +N S E S E L+ + T ES+D K + + Sbjct: 578 I---NKDRNPNESSEFSISLFKESQEHALFEAFNAIKTSAFESLDSK-----IEAYFGLH 629 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P+E +F VLV D E++ NR + L + L + ++++I Sbjct: 630 APLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQSFLEIGDIKEI 672 >gi|319760170|ref|YP_004124108.1| glycyl-tRNA synthetase beta subunit [Candidatus Blochmannia vafer str. BVAF] gi|318038884|gb|ADV33434.1| glycyl-tRNA synthetase beta subunit [Candidatus Blochmannia vafer str. BVAF] Length = 701 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 172/748 (22%), Positives = 320/748 (42%), Gaps = 106/748 (14%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK----- 57 L+EI ++E+PA+ +D + K+ ++Y + + +P L + + Sbjct: 5 TLLVEIGTDELPAKFLKNIGKDFYSHIKNEFKKNNILYNEIYWFASPRHLAVKSRISIGK 64 Query: 58 -------------GLSPHSPEKIEERLGPRVGAGKKAIDGFLRSTG----------LQTI 94 + +K FL+ + + Sbjct: 65 NQSLFKSDVYNRSDIDNCIVDKNL----------------FLKKKNNKFSQNISSHVNIL 108 Query: 95 SDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFS 154 + + + + D ++ V R + +L I+ A+ + ++MRW Sbjct: 109 EFNRFETEGIRQDKFINV-----RQFKLLLVQIIKNALGNLINYETMRWGDV-----LIP 158 Query: 155 WIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE- 213 +IRP+ ++ +L I+ + I YG+R+ + I + + + Y L Sbjct: 159 FIRPVNTVTILL-----DTNIVSGRIFNKNINRIVYGNRYIKNNKIILNNANDYPNVLFE 213 Query: 214 EAMVLLDPECRRNAILNDAHRLASAVGLELVE-DKDLLEEIIGLVEWVQVFMGSFDKKYL 272 + V++D R+ I D A +G + + D LE+I +EW + G F+K++L Sbjct: 214 QGYVIVDYNIRKQKIRMDVEHKALKLGGVVDIKNDDFLEKITSSIEWPIILFGKFNKRFL 273 Query: 273 CLPEELIRLTIKTNQKCFVTRTRE-GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLE 331 LP+ELI ++ Q+ F + +L FI V NI + I+ + ++ R Sbjct: 274 KLPKELIIHIMQDKQQYFPVYGKNQDILLPYFIFVINIIIDNYNK-IINDHENIINMRFL 332 Query: 332 DALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVS 391 DA F K D N L+ +L ++VFH+++G+ ++V Sbjct: 333 DAEFFLKNDNKN--------------------RLEDYFPKLS--EIVFHSQLGSLKDKVH 370 Query: 392 RIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 RI L IA ++ + RA L K DL T++V EFPE+QG +G YA E Sbjct: 371 RITELSGWIANQVNENEFKARRAGYLCKCDLVTDVVLEFPEVQGIMGMYYAQRDGEEKEV 430 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 A +EH +PR + +PT +IS VS+ADK+DT+ +++ E P+GS+DP+ L+RA G Sbjct: 431 ALAQKEHYQPRYYTDKLPTERISCIVSIADKMDTISGIFSVKEFPTGSRDPFGLKRAAKG 490 Query: 512 IIRIILENKIDIPLSQFIE------------------DQNLILFFHDRLKLYLHDRDIRH 553 I+ I+LE + I L I ++ F RL LY + Sbjct: 491 ILNIVLEKNMPINLLDLISKSIMLYKLQLVDDDLINIKNDVYTFMCQRLCLYYRALGYKE 550 Query: 554 DLIEAILRPENDNLLTIVDLIKHLNEF--FSSAKGEKFLLSAKRIFQILAIEEKKNREIS 611 +++ ++L N++ + I ++ F KG F L KRI ++ + I+ Sbjct: 551 NIVRSVLNIRFGNIINLGKHIDSVHNFYTIQKEKGAMFNLVYKRISNLIRNQN-VFCNIT 609 Query: 612 LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVN 671 EI+ L E +L+ I+ ++ + RY +++ ++ F D V + Sbjct: 610 EEINKTLLKSLEEIKLFEQITYTKMNLNSVLQESRYSDALNIVENLFHRTNFFLDNVFIM 669 Query: 672 VDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ +++NRLSL++ +K+++ VI++ Sbjct: 670 SKNQNIKENRLSLIKTVKDLVSRVIDIS 697 >gi|317122966|ref|YP_004102969.1| glycyl-tRNA synthetase subunit beta [Thermaerobacter marianensis DSM 12885] gi|315592946|gb|ADU52242.1| glycyl-tRNA synthetase, beta subunit [Thermaerobacter marianensis DSM 12885] Length = 766 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 167/528 (31%), Positives = 264/528 (50%), Gaps = 49/528 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ EEIPA +A L+ L E G+ Y+ +R TP RL L +KGL+ Sbjct: 6 DLLVEVGCEEIPAGDCAEARRQLAERAGTALAEAGLPYEVVRTLGTPRRLTLIVKGLAAR 65 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP G +A GF R G+ + + +G+ A + Sbjct: 66 QEAREEWVRGPSKAAAFGPDGEPTRAALGFARGQGVDVAD--LVVRQTLQGEYVFARKVR 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +VL +P + + + ++MRW ++RP+ ++ +L E++ Sbjct: 124 EGRPAAEVLAEQLPAILGGLEFRRTMRWGAGEH-----RFVRPVHWLVALL-----GEEV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSL--DHYIRDLEEAMVLLDPECRRNAILNDAH 233 + + + G TYGHRF P +++ S D Y R L EA V++DPE RR I+ A Sbjct: 174 LPVSFAGVRAGRKTYGHRFLHPGAVELASASEDEYRRRLAEAYVVVDPEERRQRIVEQAR 233 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A+AVG E D +LL+E++ LVE+ F GSF + L LP +++ T+K +Q+ F R Sbjct: 234 AVAAAVGGEAEIDPELLDEVVDLVEYPTAFTGSFAAEMLELPRDVLVTTMKVHQRYFPVR 293 Query: 294 TR-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 E L FI V N + QGN RV+ ARL DA F+++D+ Sbjct: 294 QPGESRLLPYFIAVRNGD-RRHLDTVRQGNERVIRARLADARFFFQQDRQ---------- 342 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 + L R+A L+ V F +GT ++ R+ L +AQ +D + Sbjct: 343 ----------RRLADRVADLER--VSFLPGLGTLLDKTRRLERLVGWLAQRLDLPSPERE 390 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE-NV 468 RA L+KADL T +V EF EL G++G+EYA+L E + +A+ E PRG + + Sbjct: 391 QAARAAHLAKADLVTSLVYEFTELAGRMGREYALLDGEPPAVAEALAEQYLPRGGDDGEL 450 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 P+ + +++AD+ DTL +A +P+GS+DPY LRRA +G++R++ Sbjct: 451 PSTWPGLLLAIADRADTLAGCFAAGLEPTGSQDPYGLRRAGVGLLRLL 498 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 73/168 (43%), Gaps = 6/168 (3%) Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSA 593 L+ F RL+ L + HD+I+A+L + ++ + + + +S L Sbjct: 601 LLDFLAARLRGLLAEAGYAHDVIQAVLAVDGRDVPGVWARARAVAGLLASPLAADVLTVH 660 Query: 594 KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 +R + E + + P E+ L+A + +QE++ + Y Sbjct: 661 RRAANLAGRAE------ADAVDPALFREPEEQALHAAVEAAAGAVQEALAVRDYGAYFRA 714 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ F D+VLV +D +R NRL+LL+ + ++ V + ++ Sbjct: 715 IAGLRPAVDAFLDRVLVMAEDPALRANRLALLKRVADLAGRVAALGEL 762 >gi|237736436|ref|ZP_04566917.1| glycyl-tRNA synthetase subunit beta [Fusobacterium mortiferum ATCC 9817] gi|229421478|gb|EEO36525.1| glycyl-tRNA synthetase subunit beta [Fusobacterium mortiferum ATCC 9817] Length = 527 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 146/535 (27%), Positives = 264/535 (49%), Gaps = 48/535 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EE+PAR +A DL L L E + + ++ Y TP RL L + L+ + Sbjct: 3 LLFEIGMEELPARFLKQALSDLKSNLETKLNNERIKFDEIKTYGTPRRLVLDVHNLAENQ 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + LGP G +A GF +S G++ + KG+ A Sbjct: 63 EDLDLVNLGPAKSVAYVNGEISRAGLGFAKSQGIEPEQLEIV--STPKGEYIAARKFMKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +++L I+ + ++ +PKSM+W+ + RP++ L + +E ++ Sbjct: 121 KATKELLSEILKSLVLELNFPKSMKWADKK-----LRFARPVQWFLALCDSE-----VVP 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ I GN + GHRF +V +++ Y + E V++D E RR ++ D + Sbjct: 171 FEIEGIASGNKSRGHRFFG-KEFEVSNVEEYFTKIRENNVIIDIEERRA-LVKDLVAKCA 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G ++ +++LL+E+ L+E+ +GSF+ +L +P++++ ++++ +Q+ F G Sbjct: 229 GAGEQVHIEEELLDEVTNLIEYPCPIVGSFNADFLEVPQDVLIISMQVHQRYFPILDTNG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L F++V N + + +GN +V++ARL DA F++ D Sbjct: 289 KLLPKFVVVRNGI--ESSDFVRKGNEKVLSARLADARFFYQED----------------- 329 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRAI 415 L PL + +L VVF +GT +++ R + + + ++ V R + Sbjct: 330 ---LKHPLADNVEKLKT--VVFQKDLGTIYQKIERSKEIATYLIDVLGCADRKEDVLRTV 384 Query: 416 VLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L+KADL + ++ +EF +LQG +G +YA+ EN I+EH PR + +PT Sbjct: 385 YLAKADLVSNMIGEKEFTKLQGFMGADYALKSGENERVSLGIKEHYYPRFQGDLLPTEME 444 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 I ++D++DTL+ + + PSGSKDP+ALRRA LGI +I+ +K++I L Sbjct: 445 GIIAGISDRIDTLVGCFGVGVIPSGSKDPFALRRAALGIANVIVNSKLNISLKAL 499 >gi|15834798|ref|NP_296557.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydia muridarum Nigg] gi|270284964|ref|ZP_06194358.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydia muridarum Nigg] gi|270288989|ref|ZP_06195291.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydia muridarum Weiss] gi|301336362|ref|ZP_07224564.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydia muridarum MopnTet14] gi|11387146|sp|Q9PLC6|SYG_CHLMU RecName: Full=Glycyl-tRNA synthetase; Short=GlyRS; Includes: RecName: Full=Glycyl-tRNA synthetase alpha subunit; AltName: Full=Glycine--tRNA ligase alpha subunit; Includes: RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit gi|7190215|gb|AAF39052.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydia muridarum Nigg] Length = 1003 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 169/734 (23%), Positives = 312/734 (42%), Gaps = 88/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + + Y N+ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPAAFVPTGIQQLESLAKKLLADHNISYNNLEVLGTPRRLALRIQGLSHL 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTG--------LQTISDCQIKKDPKKGD 107 + E+ GP + G+ + F S G L S + K D Sbjct: 374 TIRPEAEKKGPPLSLLFEEDGSVSSQGEQFFASHGLSISHRSALDQSSTICRVRSIKGTD 433 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 V+ + + +L +P+ I+ + +PK M W + RP++ ++ + Sbjct: 434 YLFLVIPEERIETAAILVNELPLLIRSMRFPKKMTWDN-----GGVEYARPIRWLVALY- 487 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++++ + L + GNI++GHR + + S YI L +A V++ + RR+ Sbjct: 488 ----GDQVLPISLGFVSSGNISWGHRQLDNRQLTIPSSKEYIDILRDACVIVSQKERRS- 542 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + + + + L+EE + L E V F+ + LP+EL+ + +Q Sbjct: 543 IIEQGLQNLTGDQTVAIAPEHLIEETVFLTEHPFVICAQFNPDFCSLPKELLIAEMINHQ 602 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F T+ +G + N F++V + +D I++GN + +A RL D +K+D Sbjct: 603 RYFPTQNLQGEITNRFLIVCDNSPTD---TIIEGNEKALAPRLTDGNFLFKQD------- 652 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L LD + +L V + +G+ ++ +R+++ ++ L+ Sbjct: 653 -------------LLTSLDSFVEKLK--SVTYFDALGSLADKTARLKLHLEETYPLLPLC 697 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D A+ KADL + +V EFPELQG +G+ Y + + A+ EHL+ Sbjct: 698 PKEDIDTAVHYCKADLVSAVVNEFPELQGIMGRYYLQNAALSKAAAIAVGEHLQHITLGS 757 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +V T +S+ D++D L++ + + P+ S DPYALRR +L ++ ++ + + + Sbjct: 758 SVSTT--GALLSILDRVDNLLSCFILGLLPTSSHDPYALRRQSLELLTLLYTTQSSVDIE 815 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-ND 565 L F RLK L ++I A+L Sbjct: 816 DLFSRLVRHFPTTIPNTVWSPEDVLNKLCSFVWGRLKTILSSLGFAKEVIAAVLTENCPK 875 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL-LLEAE 624 N LTI++ + + E ++ E + R+ +ILA +S ++ Q L+ +E Sbjct: 876 NPLTIINSARSIQELQNTQTLETIASTHNRLKKILA-------SLSFSVTEQIFSLITSE 928 Query: 625 KRLY-AVISDFGTHIQES-MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 L+ + F + + Y L + + +F D V + DD +R+ R+ Sbjct: 929 DMLFKQALERFKEATTSLPISSREY---LLQLEDLSQSTALFLDSVRIADDDENIRNQRI 985 Query: 683 SLLQYIKNIILIVI 696 +LL + Sbjct: 986 ALLVATQKCFGFYA 999 >gi|206602766|gb|EDZ39247.1| Glycyl-tRNA synthetase, beta subunit [Leptospirillum sp. Group II '5-way CG'] Length = 739 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 183/725 (25%), Positives = 291/725 (40%), Gaps = 93/725 (12%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLE+ EE+PA + E + I L ++ + + R TP RL L L+ L Sbjct: 21 LLEVGCEELPAGVLPALREAMEIRARSLRQDFRLGPGSARVLGTPSRLILLLENLPEEQA 80 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 E GP A GF RS G+ + + +I+K +G+ Sbjct: 81 PFRETVFGPPARLAGTLPDAPSPQALGFARSQGVS-VQEIRIEK-TPRGEYLAVDKTLEI 138 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R DVL + P + +P PK+MRW + P ++RP+ ++ + +D Sbjct: 139 RKTSDVLSELFPQTLDNLPLPKTMRWGSGEGP-----FLRPVLWVMAFW-----GDLPLD 188 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + + G T RF P V+ + HY LEE + DP R I D Sbjct: 189 VRVAGVLSGTTTRSPRFSGFLPRPVRGISHYATLLEEWGIEADPVKRGEKIEKDLDLALR 248 Query: 238 AV--------GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 G+ D L +E+ LVE +V GSF + YL LP ELI+ ++ +Q+ Sbjct: 249 MEQDVGKILPGVVRRPDAGLTDEVRDLVESYRVIAGSFPEHYLDLPPELIQTVLRVHQRF 308 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 +V +G L+ F+ +S +D + + G +VV ARLEDA ++ RD+ Sbjct: 309 YVLEKPDGTLSCRFLAISGNPNADA-SLVQAGFEKVVRARLEDAQYYLNRDR-------- 359 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI----- 404 ++PL ++ LD +VF +GT +++ R L I + + Sbjct: 360 ------------ARPLSSYVSDLD--GMVFFPGVGTLSDKIRMARELSGWILEHVPEKEV 405 Query: 405 -------DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNEN--------- 448 +D L+KADL T +VREF EL+G IG Y + ++ Sbjct: 406 SASGLSRGEMAESLDSLCALAKADLATGLVREFTELEGVIGASYWLAEHREILSRDGKDA 465 Query: 449 ---ISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYAL 505 AI EH +PR + +P +SL DK+ + A P+GS DPYAL Sbjct: 466 RRIRLESAAIREHYRPRHAQDVLPETLPGRILSLVDKVLHQVGGLAGGFVPTGSMDPYAL 525 Query: 506 RRATLGIIRIILENKIDIPLSQFIED-----------QNLILFFHDRLKLYLHDRDIRHD 554 RRA G+I ++ E I LS + +L F+ +RL Y +R+ Sbjct: 526 RRAANGMIALLRETGWPIGLSAMLAKARTLVPGKDPSADLEKFWKERLVSYW-EREYPST 584 Query: 555 LIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI 614 L+ L ++ + + L E + + R+ IL+ E +L Sbjct: 585 LVRMALVDFSETVWRTGSRLAFLKEALERPEAPSLVALHTRLSNILSGE---GSGSTLRP 641 Query: 615 SPQYLLLEAEKRLYAVISDF----GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 P AEK L+ + T E + + I +P+ F+ V+V Sbjct: 642 DPTLFQQSAEKDLFRLAEKAGLLEDTGWTEKAQNGDWEGIWKASLVFVDPVGTLFETVMV 701 Query: 671 NVDDR 675 N D Sbjct: 702 NDPDP 706 >gi|295698764|ref|YP_003603419.1| glycyl-tRNA synthetase, beta subunit [Candidatus Riesia pediculicola USDA] gi|291157093|gb|ADD79538.1| glycyl-tRNA synthetase, beta subunit [Candidatus Riesia pediculicola USDA] Length = 689 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 166/721 (23%), Positives = 307/721 (42%), Gaps = 64/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 L+EI +E++P R+ + S + LK+ + Y + RL + + G S Sbjct: 10 KTLLIEIGTEDLPYRILWLILKKFSNNFLDQLKKNRFDSDKIYSYVSLRRLAVKIIGFSS 69 Query: 62 HSPEKIEERLGPRV-GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 E+ + + + + DC + + +Y ++R Sbjct: 70 SIEHCKPEKRLIKTRDFPQNNFSKCYKKKCFEENYDCLDEISFHRKTLYSKIIR------ 123 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V +++ + M+W + +IRP+ S++ +L + + Sbjct: 124 ------MVIFSLRNLSSFGFMKWGDGNVKN---QFIRPVHSVVILLDKFLVNDGN---RI 171 Query: 181 KEIPCGNITYGHR--FHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLAS 237 I T +R F I + S D Y L++ V+ D + R++ I + LA Sbjct: 172 FGINISRKTLKNRSYFSEEKYILLDSADQYPYSLQKFGHVIPDYKVRKSIIRKKINILAK 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + D +L+++ +VEW + SF K++L P+++I ++T K ++G Sbjct: 232 SSNGTVKLDYGILDQMTSMVEWPNLLKASFKKRFLSFPKDIIVHIVQTVHKYIPIYDKKG 291 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L + FI V + ++ N +V+ +RLED L F+++D+ Sbjct: 292 QLTSEFIFVYDAPFLRRKNKVIHDNQKVINSRLEDILFFFQKDRIY-------------- 337 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-DVALVDRAIV 416 L ++ ++F+ K+G E+ RI +L K I++ I LV RA + Sbjct: 338 ------SLFDFLSMTKR--ILFYKKLGNMYEKTKRIIILSKYISEKIGITQKKLVFRASL 389 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 LSK DL T +V F + QG +G YA L EN AI E PR + +P +KI Sbjct: 390 LSKCDLATSMVNCFSDTQGIVGMCYAKLDMENDEVSIAIREQYYPRYSRDRLPISKIGDI 449 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 +S++DK+D+L+ + I + G KDP LRR ++GI+RI++E K D L + IE Sbjct: 450 LSISDKIDSLVAMFGIGIEYQGKKDPLFLRRMSIGILRIMIEKKYDFNLLEIIEKSSKIY 509 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +N+ F RLK + +LI +I +L IK + F Sbjct: 510 SSFLFRKRDFLKNIDNFLMRRLKYWYFQNGCPMNLINSIQLSSIKDLQDFNLKIKAILLF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S+ K + KRI +I+ K ++ +I Q L E L+ + Sbjct: 570 QSNEKLQNLFRINKRISKIVN---KNTNQVHDDIDHQLLQSTQEIELFQTFLSVKREVYS 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 K Y + +H + P++ FF ++ + +R NR+++L+ +++++ +I+ Sbjct: 627 LFSRKMYFECMLKMHDLVIPVDHFFKHTIIMDKNHNIRQNRINILKSVQSLLSKIIDFSC 686 Query: 701 I 701 + Sbjct: 687 L 687 >gi|114778507|ref|ZP_01453351.1| Glycyl-tRNA synthetase, beta subunit:DALR anticodon binding protein [Mariprofundus ferrooxydans PV-1] gi|114551232|gb|EAU53791.1| Glycyl-tRNA synthetase, beta subunit:DALR anticodon binding protein [Mariprofundus ferrooxydans PV-1] Length = 597 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 176/622 (28%), Positives = 279/622 (44%), Gaps = 62/622 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L+EI +EEIPA + + L L LL + V ++R +P RL L+ Sbjct: 3 MKPLLIEIGTEEIPAGVAPRMGTALFDALHKLLADADVALASLRLGVSPRRLLLHAADCP 62 Query: 61 PHSPEKIEERLGPR------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ E GP A GF + +GL K KG AV Sbjct: 63 VMQADREETIWGPPERVAFADDKATGAALGFAKKSGLSLDDFTLADKGDGKGLYMKAVRT 122 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R + +++ +P ++K+P PK M+W S A +IRP++ I+ L ++ Sbjct: 123 QQGRPVAEIIAEAMPGILRKLPSPKQMQWQDGPSRSDA--FIRPVRWIVARL-----GDE 175 Query: 175 IIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +ID I G I+ GHR H I V LE V D + R+ I+ Sbjct: 176 VIDFTFAGIQSGKISRGHRVHGSSGEIDVNDP---FAWLEGQFVRADRDARKALIVTQLA 232 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+ G+ELV D LL+E+ LVEW Q +D+ +L LP E+ R+ +K +Q+CF Sbjct: 233 TAAATAGVELVGDDALLDEVTDLVEWPQAIAARYDESFLRLPAEVSRIELKHHQRCFSAC 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G ++ F V+NI++ AA+ QGN RVV ARL DA ++ RD Sbjct: 293 NADGSVSPVFFAVANIESK-NPAAVAQGNERVVNARLADAAFYFDRDPQ----------- 340 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 + LD R+ +L ++VF +G G++V RIR A+ + D R Sbjct: 341 ---------QSLDARVEKLS--EIVFQDGLGMVGDQVRRIRTFVLDNAKALGVDADAAQR 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L K+DL T +V EFPELQG +G YA + E+ + IE H P G + +P ++I Sbjct: 390 AAYLCKSDLTTGLVGEFPELQGYMGGIYARMDGESDAVAAGIESHYAPTGAEDALPEDRI 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 + + + ++ D L+ ++ + P+ S DPY LRRA +G+IR++ + + I ++ Sbjct: 450 ARAIGIGERADKLLGYFHLGRIPTASADPYGLRRAAIGLIRLLSDTAMPIDMTLAKVIDE 509 Query: 534 ---------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + F +RL + I+A + L+ Sbjct: 510 AAKQWNQQRVTIAIADDTKAQVHAFIIERLLGMSSTLGVSRTSIDAAVNSSESRPLSREA 569 Query: 573 L-IKHLNEFFSSAKGEKFLLSA 593 L +HL F SS +G+ + Sbjct: 570 LIARHLMGFESSDEGQAIAAAI 591 >gi|218462985|ref|ZP_03503076.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli Kim 5] Length = 418 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 228/416 (54%), Positives = 294/416 (70%), Gaps = 1/416 (0%) Query: 287 QKCFVTRTR-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 QKCFVTR + E L+N FILVSNIQA DGG IV GN +VV ARL DALHFWKRDQ NLP Sbjct: 1 QKCFVTRKQGEETLSNRFILVSNIQAHDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLP 60 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 +L +L SA KF LDL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L K++A + Sbjct: 61 DLETLAASAAKFGLDLKKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAKELAAVTG 120 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 AD AL DRA VL+KADL TE V EFPELQG +G++YAVLQ EN S AIE+H KP+GP Sbjct: 121 ADAALTDRAAVLAKADLRTEAVGEFPELQGLMGRKYAVLQGENASVATAIEDHYKPQGPS 180 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + VP +K +IT++LADKLDTL FWAI+EKP+GSKDP+ALRRA LG++RI+LE ++ +PL Sbjct: 181 DRVPEDKAAITLALADKLDTLTGFWAIDEKPTGSKDPFALRRAALGVVRILLERRVRLPL 240 Query: 526 SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 D +L+ FFHDRLK+YL D+ RHDLI+A+L P+ D+LL + ++ L F +S Sbjct: 241 LATTRDGDLLSFFHDRLKVYLRDQGARHDLIDAVLTPDADDLLMVARRVEALTAFITSED 300 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L KR Q+LA EEKK I+ +SP L L+AEK L+A IS +++ + Sbjct: 301 GKNLLAGTKRATQLLAAEEKKGTVIADGVSPALLKLDAEKELFAAISAASKDAADAVAGE 360 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L + P++ FF++VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 361 DFRSAMEALSKLRGPVDRFFEEVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 416 >gi|322378481|ref|ZP_08052932.1| glycyl-tRNA synthetase subunit beta [Helicobacter suis HS1] gi|322380322|ref|ZP_08054536.1| glycyl-tRNA synthetase subunit beta [Helicobacter suis HS5] gi|321147257|gb|EFX41943.1| glycyl-tRNA synthetase subunit beta [Helicobacter suis HS5] gi|321149083|gb|EFX43532.1| glycyl-tRNA synthetase subunit beta [Helicobacter suis HS1] Length = 695 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 191/721 (26%), Positives = 318/721 (44%), Gaps = 67/721 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA+ + L +L+E + Y+TP RL LY + Sbjct: 9 LLVEILLEEMPAKPLLQEFMHLKDKWRSVLEEYDLT-SQTDFYYTPTRLVLYAPDFPTET 67 Query: 64 PEKIEERLGPRV-----GAGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P +E GP + G AI F + L Q K +V A P Sbjct: 68 PTHTQEHFGPPLNVGMDGNTLNAIGQNFYQKLHLDPTVALQTATKGAK-EVLYATTTTPS 126 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L T++ ++ + + KSM W + +IRP+ +I I + Sbjct: 127 KQTATLLDTLLLNFLKSLDFGKSMAWGDVRA-----RFIRPIHNICVIFNNQVIDLSAC- 180 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + T H + +K S++HY L+E +VLLDP+ RR IL + L Sbjct: 181 MQTFACSDKRATKLHFAKSFDYLKTPSVEHYFGVLKEGLVLLDPKERREKILTEIRLLEQ 240 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +E+ + DLLEEII + + G FD K+L LP E+I +++ +Q+ F T G Sbjct: 241 HHQIEVQINPDLLEEIIAITSYPTALYGQFDAKFLELPAEIITTSMQEHQRYFATFRG-G 299 Query: 298 VLANCFILVSNIQASDGGAAI--VQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 VL N FI+VSN + GN +V+ ARL DA+ F+ D N N + Sbjct: 300 VLNNGFIVVSNTPLIHVQDFTEIIVGNEKVLRARLSDAMFFYYNDLNKPFNFKQCAHA-- 357 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVALVDR 413 + + F +G+ +++ R + + + + Q +++ + V Sbjct: 358 ------------------LDQIAFIQGLGSLKDKIKREQQIARYLVQKFMLEIEEEQVLE 399 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ L+K DL +E+V EFPELQG +G YA ++ C AI+E P +PT + Sbjct: 400 ALSLAKIDLLSEVVYEFPELQGVMGSYYAKHHGYPLAICMAIKEQYLPTAENTPLPTTLL 459 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQFIEDQ 532 VSL+ KLD+L++ ++I + P+GSKDP+ALRR+ G++RI L+ +I L S + Q Sbjct: 460 GALVSLSHKLDSLLSLFSIGKIPTGSKDPFALRRSCNGVLRICLQYQIPFNLESDLLALQ 519 Query: 533 N----------LILFFHDRL-------KLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 N L F +R + + L + + I ++ Sbjct: 520 NLGYKPFDVKILRDFILERFLHVLSTIPNFYPNLYKGVLQGIETLNQGDYEICQIDAKVR 579 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L FF + ++F+ KR+ I ++ + + + P+ + +E L+ Sbjct: 580 ALVAFFEKTQTKEFVAVFKRVANI-----TQDYKDTKPVDPELFIDSSEVDLFTAYHQLE 634 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +S+ K L ++ EP+E+FFD+VLVN ++ ++ NR LL + L V Sbjct: 635 ATHFDSLQDK-----IHALFALKEPLEVFFDRVLVNDANQRIQHNRKGLLWLVYRAFLGV 689 Query: 696 I 696 Sbjct: 690 A 690 >gi|330937261|gb|EGH41275.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. pisi str. 1704B] Length = 436 Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats. Identities = 136/475 (28%), Positives = 210/475 (44%), Gaps = 48/475 (10%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFFAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELAAQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDGAGKLLPRFITVANIESKD-PAQIIAGNEKVVRPRLTDAEFFFKQDK---------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 334 ----------KQKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGA 436 >gi|269302737|gb|ACZ32837.1| glycyl-tRNA synthetase (GlyRS) [Chlamydophila pneumoniae LPCoLN] Length = 1010 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 172/723 (23%), Positives = 307/723 (42%), Gaps = 85/723 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI SEE+PA + L + +L + ++Y+ + +P RL L +K ++P Sbjct: 316 DLLLEIGSEELPATFVPIGIQQLESLARQVLTDHNIVYEGLEVLGSPRRLALLVKNIAPE 375 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQI-------KKDPKKGDV 108 +K E+ GP G F S G+ + + + Sbjct: 376 VVQKAFEKKGPMLTSLFSPNGDVSPQGQQFFASQGVDISHYQDLSRHASLAIRTVNGSEY 435 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 + + + D+L +P+ IQ++ +PK M W S + RP++ ++ + Sbjct: 436 LFLLHPEVRLRTADILMQELPLLIQRMKFPKKMVWDN-----SGVEYARPIRWLVALY-- 488 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E I+ + L I ++GHR P I + S Y+ L +A V++ + RR I Sbjct: 489 ---GEHILPITLGTIIASRNSFGHRQLDPREISISSPQDYVETLRQACVVVSQKERR-MI 544 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + R S+ + + L+EE L E V G F +++ LP+EL+ + +QK Sbjct: 545 IEQGLRAHSSDTISAIPLPRLIEEATFLSEHPFVSCGQFSEQFCALPKELLIAEMVNHQK 604 Query: 289 CFVTRT-REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F T G ++N FI+V + +D I++GN + + RL D +K+D Sbjct: 605 YFPTHETSSGAISNFFIVVCDNSPND---TIIEGNEKALTPRLTDGEFLFKQD------- 654 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++V R++ + + A Sbjct: 655 -------------LQTPLTTFIEKLK--SVTYFEALGSLYDKVERLKAHQRVFSTFSSLA 699 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y N + A+ EHL+ + Sbjct: 700 ASKDLDIAIQYCKADLVSAVVNEFPELQGIMGEYYLKHANLPTASAVAVGEHLRHITMGQ 759 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 + + I +SL D+LD L+ + + KP+ S DPYALRR +L ++ ++ +++ I L+ Sbjct: 760 KL--STIGTLLSLLDRLDNLLACFILGLKPTSSHDPYALRRQSLEVLTLVSASRLPIDLA 817 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND- 565 ++ ++ F RLK ++ + R D I A+L Sbjct: 818 SLLDRLADHFPSTIEEKVWDKSKTIHEILEFIWGRLKTFMGSLEFRKDEIAAVLIDSATK 877 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFL---LSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 N + I+D + L EK + R+ +IL+ + +E+ L + Sbjct: 878 NPIEILDTAEALQ-LLKEEHTEKLAVITTTHNRLKKILSSLKLSMTSSPIEV-----LGD 931 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 E + + D + + + L + I+ F + V + DD +R+ R+ Sbjct: 932 RESN-FKQVLDAFPEFPKETSAHAFLEYFLSLADLSNDIQDFLNTVHIASDDGAIRNLRI 990 Query: 683 SLL 685 SLL Sbjct: 991 SLL 993 >gi|309807579|ref|ZP_07701531.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 01V1-a] gi|308169185|gb|EFO71251.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 01V1-a] Length = 544 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 169/585 (28%), Positives = 276/585 (47%), Gaps = 66/585 (11%) Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 MRW ++RP+ I+ + +E II + + +I G TYGHRF + Sbjct: 1 MRWGNYD-----LEFVRPIHWIVSLFGSE-----IIPVKILDIVAGRKTYGHRFLG-ESL 49 Query: 201 KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWV 260 + + D Y L+ V+ D R+N IL+ + L ++ D LLEE+ LVE+ Sbjct: 50 VLATSDDYESALKSQFVIADANQRKNMILSQINSLCEKNNWQVKIDSGLLEEVTNLVEYP 109 Query: 261 QVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQ 320 +F GSF++KYL +P+E++ ++K NQ+ F EG L N FI + N SD ++ Sbjct: 110 TIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDHEGTLINHFIAIRNG-NSDYLDNVIA 168 Query: 321 GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFH 380 GN +V+ ARL+DA F+ D+ PL + +L V FH Sbjct: 169 GNEKVLVARLDDAQFFYDEDK--------------------KYPLSHFVEKLS--SVSFH 206 Query: 381 AKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDRAIVLSKADLCTEIVREFPELQGKI 437 KIG+ E++ R++++G+ I + I+ ++A DRA + K DL T +V EF ELQG + Sbjct: 207 DKIGSMAEKMLRVKLIGEYIGKKINLSSSELADFDRAADIYKFDLVTNMVGEFAELQGIM 266 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G YA L E + AI+E P ++P KI +S+ADKLDT+I F+ P+ Sbjct: 267 GTHYAELAGERKAVSQAIKESYLPSSADGDLPITKIGSLLSIADKLDTIIAFFGAGMIPN 326 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------------DQNLILF 537 S DPYALRR+ GI+RI++ +I + ++ + F Sbjct: 327 SSNDPYALRRSAYGIVRILINQSWNISIEDALKDIIALLKGKTVAKLPNDEATQAEISDF 386 Query: 538 FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 +R+K L + +D+I+ +L N+ I+ + L E +K +K + S R+ Sbjct: 387 IINRVKQLLQVKKYSYDVIDTVLASNQQNVANILSIADILQENHDDSKFKKVVESLTRVA 446 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL K + + +I+P +EK LY I+ + + Sbjct: 447 NILK---KADFSEAGQINPDLFENNSEKALYDKINLL------LDKSLDVKTLYSEFVQL 497 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 I+ +FD ++ + V+ NRLS L+ I + L ++ K+V Sbjct: 498 QPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKLALEFGDLSKLV 542 >gi|16752084|ref|NP_445450.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydophila pneumoniae AR39] gi|33242312|ref|NP_877253.1| glycyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] gi|12643527|sp|Q9Z6W0|SYG_CHLPN RecName: Full=Glycyl-tRNA synthetase; Short=GlyRS; Includes: RecName: Full=Glycyl-tRNA synthetase alpha subunit; AltName: Full=Glycine--tRNA ligase alpha subunit; Includes: RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit gi|7189826|gb|AAF38698.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydophila pneumoniae AR39] gi|33236823|gb|AAP98910.1| glycyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] Length = 1010 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 172/723 (23%), Positives = 307/723 (42%), Gaps = 85/723 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI SEE+PA + L + +L + ++Y+ + +P RL L +K ++P Sbjct: 316 DLLLEIGSEELPATFVPIGIQQLESLARQVLTDHNIVYEGLEVLGSPRRLALLVKNVAPE 375 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQI-------KKDPKKGDV 108 +K E+ GP G F S G+ + + + Sbjct: 376 VVQKAFEKKGPMLTSLFSPDGDVSPQGQQFFASQGVDISHYQDLSRHASLAIRTVNGSEY 435 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 + + + D+L +P+ IQ++ +PK M W S + RP++ ++ + Sbjct: 436 LFLLHPEIRLRTADILMQELPLLIQRMKFPKKMVWDN-----SGVEYARPIRWLVALY-- 488 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E I+ + L I ++GHR P I + S Y+ L +A V++ + RR I Sbjct: 489 ---GEHILPITLGTIIASRNSFGHRQLDPRKISISSPQDYVETLRQACVVVSQKERR-MI 544 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + R S+ + + L+EE L E V G F +++ LP+EL+ + +QK Sbjct: 545 IEQGLRAHSSDTISAIPLPRLIEEATFLSEHPFVSCGQFSEQFCALPKELLIAEMVNHQK 604 Query: 289 CFVTRT-REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F T G ++N FI+V + +D I++GN + + RL D +K+D Sbjct: 605 YFPTHETSSGAISNFFIVVCDNSPND---TIIEGNEKALTPRLTDGEFLFKQD------- 654 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++V R++ + + A Sbjct: 655 -------------LQTPLTTFIEKLK--SVTYFEALGSLYDKVERLKAHQRVFSTFSSLA 699 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y N + A+ EHL+ + Sbjct: 700 ASEDLDIAIQYCKADLVSAVVNEFPELQGIMGEYYLKHANLPTASAVAVGEHLRHITMGQ 759 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 + + I +SL D+LD L+ + + KP+ S DPYALRR +L ++ ++ +++ I L+ Sbjct: 760 KL--STIGTLLSLLDRLDNLLACFILGLKPTSSHDPYALRRQSLEVLTLVSASRLPIDLA 817 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND- 565 ++ ++ F RLK ++ + R D I A+L Sbjct: 818 SLLDRLADHFPSTIEEKVWDKSKTIHEILEFIWGRLKTFMGSLEFRKDEIAAVLIDSATK 877 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFL---LSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 N + I+D + L EK + R+ +IL+ + +E+ L + Sbjct: 878 NPIEILDTAEALQ-LLKEEHTEKLAVITTTHNRLKKILSSLKLSMTSSPIEV-----LGD 931 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 E + + D + + + L + I+ F + V + DD +R+ R+ Sbjct: 932 RESN-FKQVLDAFPGFPKETSAHAFLEYFLSLADLSNDIQDFLNTVHIANDDGAIRNLRI 990 Query: 683 SLL 685 SLL Sbjct: 991 SLL 993 >gi|676852|gb|AAA82982.1| glycyl-tRNA synthetase [Chlamydia trachomatis] Length = 1008 Score = 389 bits (999), Expect = e-105, Method: Composition-based stats. Identities = 166/739 (22%), Positives = 298/739 (40%), Gaps = 93/739 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTI--------SDCQIKKDPKKGD 107 + E+ GP + G+ + F S GL S + D Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFPSHGLSISHRSALDQPSAICRVRSINGTD 433 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 434 YLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY- 487 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 ----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERRA- 542 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + + + + + L++E + L E V FD + LP+EL+ + + Sbjct: 543 IIKQGLQNLTGDQIVAIAPEHLVDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQHP 602 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 ++V + +D IV+GN + +A RL D +K+D Sbjct: 603 TVLPNTKYARRNHQSILIVCDNSPTDS---IVEGNEKALAPRLTDGNFLFKQD------- 652 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++ SR+++ ++ L+ Sbjct: 653 -------------LLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPLC 697 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 698 AKEDIDPAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLGS 757 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 N+ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ + + + Sbjct: 758 NISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDIE 815 Query: 527 QFIED-------------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 L F RL+ L ++I +L Sbjct: 816 DLFARLIRHFPSSARFASIPNTVWSPEEVLSKLNTFVWGRLRTILSSLGFDKEIIATVLT 875 Query: 562 PE-NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL- 619 N LTI+ + + E ++ + + R+ +ILA +S ++ Q Sbjct: 876 DNCPKNPLTIIQSAQSIQELKNTQILKTIAATHNRLKKILA-------SLSFSVTEQMFS 928 Query: 620 LLEAEKRLY-AVISDFGTHIQES-MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 L AE L+ + F + K Y + L E F D V V DD Sbjct: 929 LQSAEDLLFKQALDRFVEETTALPISSKDYLHLLKELAQSTEL---FLDSVRVASDDEST 985 Query: 678 RDNRLSLLQYIKNIILIVI 696 R+ R++LL + Sbjct: 986 RNQRIALLIAAQKCFGFYA 1004 >gi|15836479|ref|NP_301003.1| glycyl tRNA synthetase [Chlamydophila pneumoniae J138] gi|8979320|dbj|BAA99154.1| glycyl tRNA synthetase [Chlamydophila pneumoniae J138] Length = 1014 Score = 389 bits (998), Expect = e-105, Method: Composition-based stats. Identities = 172/723 (23%), Positives = 307/723 (42%), Gaps = 85/723 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI SEE+PA + L + +L + ++Y+ + +P RL L +K ++P Sbjct: 320 DLLLEIGSEELPATFVPIGIQQLESLARQVLTDHNIVYEGLEVLGSPRRLALLVKNVAPE 379 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQI-------KKDPKKGDV 108 +K E+ GP G F S G+ + + + Sbjct: 380 VVQKAFEKKGPMLTSLFSPDGDVSPQGQQFFASQGVDISHYQDLSRHASLAIRTVNGSEY 439 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 + + + D+L +P+ IQ++ +PK M W S + RP++ ++ + Sbjct: 440 LFLLHPEIRLRTADILMQELPLLIQRMKFPKKMVWDN-----SGVEYARPIRWLVALY-- 492 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E I+ + L I ++GHR P I + S Y+ L +A V++ + RR I Sbjct: 493 ---GEHILPITLGTIIASRNSFGHRQLDPRKISISSPQDYVETLRQACVVVSQKERR-MI 548 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + R S+ + + L+EE L E V G F +++ LP+EL+ + +QK Sbjct: 549 IEQGLRAHSSDTISAIPLPRLIEEATFLSEHPFVSCGQFSEQFCALPKELLIAEMVNHQK 608 Query: 289 CFVTRT-REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F T G ++N FI+V + +D I++GN + + RL D +K+D Sbjct: 609 YFPTHETSSGAISNFFIVVCDNSPND---TIIEGNEKALTPRLTDGEFLFKQD------- 658 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++V R++ + + A Sbjct: 659 -------------LQTPLTTFIEKLK--SVTYFEALGSLYDKVERLKAHQRVFSTFSSLA 703 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y N + A+ EHL+ + Sbjct: 704 ASEDLDIAIQYCKADLVSAVVNEFPELQGIMGEYYLKHANLPTASAVAVGEHLRHITMGQ 763 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 + + I +SL D+LD L+ + + KP+ S DPYALRR +L ++ ++ +++ I L+ Sbjct: 764 KL--STIGTLLSLLDRLDNLLACFILGLKPTSSHDPYALRRQSLEVLTLVSASRLPIDLA 821 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND- 565 ++ ++ F RLK ++ + R D I A+L Sbjct: 822 SLLDRLADHFPSTIEEKVWDKSKTIHEILEFIWGRLKTFMGSLEFRKDEIAAVLIDSATK 881 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFL---LSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 N + I+D + L EK + R+ +IL+ + +E+ L + Sbjct: 882 NPIEILDTAEALQ-LLKEEHTEKLAVITTTHNRLKKILSSLKLSMTSSPIEV-----LGD 935 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 E + + D + + + L + I+ F + V + DD +R+ R+ Sbjct: 936 RESN-FKQVLDAFPGFPKETSAHAFLEYFLSLADLSNDIQDFLNTVHIANDDGAIRNLRI 994 Query: 683 SLL 685 SLL Sbjct: 995 SLL 997 >gi|15618855|ref|NP_225141.1| glycyl tRNA synthetase [Chlamydophila pneumoniae CWL029] gi|4377270|gb|AAD19084.1| Glycyl tRNA Synthetase [Chlamydophila pneumoniae CWL029] Length = 1014 Score = 389 bits (998), Expect = e-105, Method: Composition-based stats. Identities = 172/723 (23%), Positives = 307/723 (42%), Gaps = 85/723 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI SEE+PA + L + +L + ++Y+ + +P RL L +K ++P Sbjct: 320 DLLLEIGSEELPATFVPIGIQQLESLARQVLTDHNIVYEGLEVLGSPRRLALLVKNVAPE 379 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQI-------KKDPKKGDV 108 +K E+ GP G F S G+ + + + Sbjct: 380 VVQKAFEKKGPMLTSLFSPDGDVSPQGQQFFASQGVDISHYQDLSRHASLAIRTVNGSEY 439 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 + + + D+L +P+ IQ++ +PK M W S + RP++ ++ + Sbjct: 440 LFLLHPEIRLRTADILMQELPLLIQRMKFPKKMVWDN-----SGVEYARPIRWLVALY-- 492 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E I+ + L I ++GHR P I + S Y+ L +A V++ + RR I Sbjct: 493 ---GEHILPITLGTIIASRNSFGHRQLDPRKISISSPQDYVETLRQACVVVSQKERR-MI 548 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + R S+ + + L+EE L E V G F +++ LP+EL+ + +QK Sbjct: 549 IEQGLRAHSSDTISAIPLPRLIEEATFLSEHPFVSCGQFSEQFCALPKELLIAEMVNHQK 608 Query: 289 CFVTRT-REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F T G ++N FI+V + +D I++GN + + RL D +K+D Sbjct: 609 YFPTHETSSGAISNFFIVVCDNSPND---TIIEGNEKALTPRLTDGEFLFKQD------- 658 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++V R++ + + A Sbjct: 659 -------------LQTPLTTFIEKLK--SVTYFEALGSLYDKVERLKAHQRVFSTFSSLA 703 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y N + A+ EHL+ + Sbjct: 704 ASEDLDIAIQYCKADLVSAVVNEFPELQGIMGEYYLKHANLPTASAVAVGEHLRHITMGQ 763 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 + + I +SL D+LD L+ + + KP+ S DPYALRR +L ++ ++ +++ I L+ Sbjct: 764 KL--STIGTLLSLLDRLDNLLACFILGLKPTSSHDPYALRRQSLEVLTLVSASRLPIDLA 821 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND- 565 ++ ++ F RLK ++ + R D I A+L Sbjct: 822 SLLDRLADHFPSTIEEKVWDKSKTIHEILEFIWGRLKTFMGSLEFRKDEIAAVLIDSATK 881 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFL---LSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 N + I+D + L EK + R+ +IL+ + +E+ L + Sbjct: 882 NPIEILDTAEALQ-LLKEEHTEKLAVITTTHNRLKKILSSLKLSMTSSPIEV-----LGD 935 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 E + + D + + + L + I+ F + V + DD +R+ R+ Sbjct: 936 RESN-FKQVLDAFPGFPKETSAHAFLEYFLSLADLSNDIQDFLNTVHIANDDGAIRNLRI 994 Query: 683 SLL 685 SLL Sbjct: 995 SLL 997 >gi|330443837|ref|YP_004376823.1| glycyl-tRNA synthetase [Chlamydophila pecorum E58] gi|328806947|gb|AEB41120.1| Glycyl-tRNA synthetase [Chlamydophila pecorum E58] Length = 1008 Score = 388 bits (996), Expect = e-105, Method: Composition-based stats. Identities = 161/721 (22%), Positives = 300/721 (41%), Gaps = 82/721 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA+ + L ++ LL+ + Y+ + + +P RL + + L+P Sbjct: 315 DFLLEIGSEELPAKFVPIGIQQLESLITKLLESYRIPYEKLEVFGSPRRLAVLIHKLTPI 374 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQI-------KKDPKKGDV 108 + +K E+ GP + G F + + ++ + + + Sbjct: 375 TTQKASEKKGPPIASLFTESGEVSSQGQQFFSAQHVVLSHREELSQHTQFAIRVINQVEY 434 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 + + +L +P I + +PK M W +S + RP++ ++ + Sbjct: 435 LFFLTPETSIETAKILTEELPKLIHTMKFPKKMIW-----DMSGVEYARPIRWLVALYGN 489 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + I+ L + I T GHR P + + S Y+ L A V++ + R+ I Sbjct: 490 D-----ILPLTIGSISASRNTQGHRQLDPRTLSISSPKDYLDTLRSACVIVSQKERQEII 544 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + +S + + D L+EE + L E V G F + +P+EL+ + +Q+ Sbjct: 545 EHGLRAHSSPT-ITPIMDSQLIEETVFLTEHPFVTCGKFSSTFCSVPKELLVAEMIQHQR 603 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F T+ G + N F+ V++ +D I++GN + + RL D + +D Sbjct: 604 YFPTQDTTGAITNSFVFVTDNSPND---VIIEGNEKALTPRLTDGAFLFNQD-------- 652 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-D 407 L PL+ + +L+ V + +G+ +++ R++ + + L+ D Sbjct: 653 ------------LQTPLETFVDKLN--SVTYFDALGSLYDKIERLKAHKEILFPLLPLGD 698 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 ++ AI K DL + +V EFPELQG +G+ Y ++ A+ EHL+ + Sbjct: 699 SEDLNIAIRYCKIDLVSSVVFEFPELQGIMGEYYLKHAQLPVTAAKAVREHLRHITLGQT 758 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 + + +SL D+ D +I+ + +N KP+ S DPYALRR +L II ++ + I LS Sbjct: 759 I--SPTGTLLSLLDRFDNIISCFILNLKPTSSHDPYALRRQSLEIITLLSSLEFSIDLSA 816 Query: 528 FIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAI-LRPENDN 566 + +I F RL+ +L D+I + L N Sbjct: 817 LFNKLIENFPKELPIGLWDKRAIIEQIISFIGGRLRTFLTSLGFSKDIIATVFLESSLHN 876 Query: 567 LLTIVDLIKHLNEFFSS--AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 + I+ + +F + + R+ +ILA + I+ I E Sbjct: 877 PIAIIHAATAIQQFKQDQPEALRNIIETHNRLKKILASLQLNTIAITHIIG----EQPDE 932 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + I + + ++ K L + I+ F ++V V DD +R R+SL Sbjct: 933 I--FKSILNQFPELPKNPLPKELFAYLLSLDQLSVAIQNFLNEVHVACDDETLRSFRISL 990 Query: 685 L 685 L Sbjct: 991 L 991 >gi|325849593|ref|ZP_08170831.1| glycine--tRNA ligase, beta subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480074|gb|EGC83151.1| glycine--tRNA ligase, beta subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 561 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 181/601 (30%), Positives = 307/601 (51%), Gaps = 63/601 (10%) Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 ++ + ++ + +P+SMRW + + RP++ L +L ++I+D D + I Sbjct: 1 MQKNIYELVKSLNFPRSMRWG-----GRSIRFARPIRYFLSLL-----DDEILDFDAEGI 50 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 N T GHR I V +D Y+ L+E V+L + RR IL +R A +G + Sbjct: 51 KVSNTTKGHRVLGKSEIVVDKIDSYLDLLKENFVILSYKERREIILRGLNRYAKEIGGKF 110 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCF 303 ++D+DLLEE+I +VE+ V MG D +YL LP+E+I +K +Q+ F L F Sbjct: 111 LKDEDLLEEVINIVEYPTVLMGELDHEYLKLPKEVIITPMKDHQRYFPIVDDNENLMPYF 170 Query: 304 ILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSK 363 +LV N ++ GN +V+ ARLEDA F+ D N K Sbjct: 171 LLVRNGD-DYAKENVISGNKKVLTARLEDAKFFYDIDNN--------------------K 209 Query: 364 PLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVAL-VDRAIVLSKA 420 L++ + +LD + F +G+ ++ R+ L K + + DV+ + RA LSKA Sbjct: 210 KLEEYVDQLDR--LTFFEGLGSMKQKTERLISLSKNYLEEFKLGEDVSDNLLRAAYLSKA 267 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T++V EF ELQG +G+ YA ENI +AIEE KPR +++P + I +S+A Sbjct: 268 DLVTKMVIEFTELQGTMGRIYATNSGENIQVANAIEEAYKPRSSEDSLPKSVAGIVLSIA 327 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DK+DT+ + I + +GS+DP+ LRR+ +G+I II + KID+ + ++D Sbjct: 328 DKIDTITGHYIIEDYVTGSQDPFGLRRSAIGVINIIADKKIDVDIKDLVKDSLFVYTEKN 387 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + FF DRLK ++D+ R+DL+ A+L N+L++++ +K L EF Sbjct: 388 ELSFDYNQTLEKITEFFIDRLKNMMNDKGYRYDLVNAVLNTGESNVLSVIEKVKALEEFV 447 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 E+ L RI + S++++ + L EK+ Y I++ + ++ Sbjct: 448 GQDDSEEILNYFTRINNFTKDFD------SIDVNVEKLDEGLEKQYYDCINNLES--EKY 499 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + K Y + + + S + + D ++ VDD E+++NRL+LL + I V N++ + Sbjct: 500 LGQKLYQKALEEIASTRQIGNEYLDNTMIMVDDEEIKNNRLALLNKLAKDISRVFNIKDL 559 Query: 702 V 702 V Sbjct: 560 V 560 >gi|29840580|ref|NP_829686.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydophila caviae GPIC] gi|29834930|gb|AAP05564.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydophila caviae GPIC] Length = 1006 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 169/721 (23%), Positives = 303/721 (42%), Gaps = 84/721 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 ++LLEI SEE+PA + L + LL + + Y+++ +P RL L + L P Sbjct: 315 NYLLEIGSEELPATFVPIGIQQLESLAKKLLADYNIGYESLEVLGSPRRLALLVYKLEPT 374 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQI-------KKDPKKGDV 108 + +K E+ GP + G + F S + ++ ++ + Sbjct: 375 AIQKAVEKKGPMLSSLFSDSGDITAQGEQFFASHNISIRHYDELSQHSLFEIREIGSVNY 434 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 + + R +L +P IQ + +PK M + S + RP++ I+ + Sbjct: 435 LFILHPEVCRDTVTILANELPKLIQSMKFPKKMVYDD-----SGVEYARPIRWIVSLY-- 487 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 I+ ++ GN + GHR P + + S +HYI L A V++ + RR I Sbjct: 488 ---GTSILPFSFGKVVAGNTSMGHRQLDPREVPIPSCEHYIDTLRNACVVVSHKERRE-I 543 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + +L S+ + V + LLEE + L E V FDKK+ LP+EL+ + +QK Sbjct: 544 IEQGLKLHSSDNVSPVANPRLLEETVFLTEHPFVTCAQFDKKFCALPKELLIAEMVNHQK 603 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F T+ + N FILV + +D I++GN + + RL D + +D Sbjct: 604 YFPTQNTAKEITNQFILVCDNCPND---IIIEGNEKALTPRLTDGDFLFAQD-------- 652 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L L + +L V + +G+ ++V R++ + + L+ Sbjct: 653 ------------LKTSLAIFVDKLK--AVTYFEALGSLYDKVERLKAHKEVVYPLLPISS 698 Query: 409 A-LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + AI KADL + +V EF ELQG +G+ Y + + A+ EHL+ + Sbjct: 699 QEDITTAIEFCKADLVSAVVNEFAELQGIMGEYYIKHAGLSHAAAVAVGEHLRHITDGQT 758 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 + T +SL D+ D L++ + ++ +P+ S DPYALRR +L I+ ++ ++ + L Sbjct: 759 ISTT--GTLLSLIDRFDNLLSCFILDLRPTSSHDPYALRRQSLEILTLLHASEASLDLES 816 Query: 528 FIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DN 566 + ++++ F RLK ++ D I +L + N Sbjct: 817 LLHHLADNFPATVQGATWDKPAVIRDILTFIWGRLKTFMASLGFSKDEIATVLSDTSEKN 876 Query: 567 LLTIVDLIKHLNEFFSSAKG--EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 + ++ L +S + EK + R+ +ILA K + I E Sbjct: 877 PVEMLKSATALQAMKNSHRAILEKITTTHNRLKKILA-SLKLSTNTLTPIELDL----QE 931 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 +L A + F +Q K Y L + + I F ++V V E+++ R+ L Sbjct: 932 SQLKAALDHFDASVQTKDSKKDY---FLSLGDLTDSINTFLNEVHVTSGSEELQNLRIYL 988 Query: 685 L 685 L Sbjct: 989 L 989 >gi|89897998|ref|YP_515108.1| glycyl tRNA synthetase [Chlamydophila felis Fe/C-56] gi|89331370|dbj|BAE80963.1| glycyl tRNA synthetase [Chlamydophila felis Fe/C-56] Length = 1007 Score = 385 bits (988), Expect = e-104, Method: Composition-based stats. Identities = 167/722 (23%), Positives = 303/722 (41%), Gaps = 84/722 (11%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFLLEI SEE+PA + L + LL + + Y+++ +P RL L + L P Sbjct: 315 ADFLLEIGSEELPATFVPIGIQQLESLAKKLLSDYNIGYESLEVLGSPRRLALLIYKLEP 374 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQI-------KKDPKKGD 107 + +K E+ GP + G + F S + ++ ++ Sbjct: 375 TAVQKATEKKGPILSSLFSDSGNVTTQGEQFFASHNVHIRHYNELFQYSQFEIREIHSVK 434 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 + + + +L +P IQ + +PK M + S + RP++ ++ + Sbjct: 435 YLFLLHPEVHQDTATILANELPRLIQSMKFPKKMVYDD-----SGVEYARPIRWLVSLY- 488 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 I+ + N ++GHR P I + S + Y+ L +A V++ + RR Sbjct: 489 ----GTSILPFSFGKTSASNTSWGHRQLDPREITIPSCESYVEALRDACVIVSHKERRE- 543 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + S+ + + + LLEE I L E V FD K+ LP+EL+ + +Q Sbjct: 544 IIEQGLKSHSSDNVFPIANPRLLEETIFLTEHPFVTCAQFDPKFCALPKELLIAEMVNHQ 603 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 K F T+ G + N FILV + +D I++GN + +A RL D + +D Sbjct: 604 KYFPTQNASGEITNKFILVCDNCPND---IIIEGNEKALAPRLTDGDFLFAQD------- 653 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 L L +L V + +G+ ++V R++ + I L+ Sbjct: 654 -------------LKTSLSTFTDKLK--SVTYFEALGSLYDKVERLKAHKEIILPLLPLS 698 Query: 408 VA-LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + AI KADL + +V EF ELQG +G+ Y + + A+ EHL+ + Sbjct: 699 SQEDISTAIEFCKADLVSAVVNEFAELQGIMGEYYLKNAGLSKASAVAVGEHLRHITDGQ 758 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 + + +SL D+ D L++ + ++ +P+ S DPYALRR +L I+ ++ ++ + L Sbjct: 759 TISST--GTLLSLIDRFDNLLSCFILDLRPTSSHDPYALRRQSLEILTLLHASEASLDLE 816 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-D 565 + ++++ F RLK +L D I +L + Sbjct: 817 SLLHHLADNFPATIQETSWDKPAVVRDILTFIWGRLKTFLASLGFSKDEIATVLSDTSEK 876 Query: 566 NLLTIVDLIKHLNEFFS--SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 N + I+ + + EK + R+ +ILA + + +LE L Sbjct: 877 NPVEIIKSAMAIQGMKASHKDILEKITTTHNRLRKILASLKLSTSKYALEQ-----LDAQ 931 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E +L +V+ F + + K Y L ++ + I +F + V V E+++ R+ Sbjct: 932 EAKLKSVLDQFSVSVNIKNNKKDY---LLNLGNLTDSINMFLNTVHVTSGSEELQNLRIH 988 Query: 684 LL 685 LL Sbjct: 989 LL 990 >gi|62185397|ref|YP_220182.1| glycyl-tRNA synthetase alpha chain [Chlamydophila abortus S26/3] gi|62148464|emb|CAH64234.1| glycyl-tRNA synthetase alpha chain [Chlamydophila abortus S26/3] Length = 1005 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 165/723 (22%), Positives = 301/723 (41%), Gaps = 87/723 (12%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FLLEI SEE+PA + L + LL + + Y ++ +P RL L + L P Sbjct: 314 KNFLLEIGSEELPATFVPMGIQQLESLAKKLLSDYNIGYDSLEVLGSPRRLALLIYNLEP 373 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQI-------KKDPKKGD 107 + +K E+ GP + G + F + ++ ++ + Sbjct: 374 TAIQKASEKKGPVLSSLFSHSGDVTTQGEQFFATHHAHIRHYSELAQYSLFDIREVQGVR 433 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 + + ++ +L +P IQ + +PK M + S + RP++ ++ + Sbjct: 434 YLFLLYPEVRKDTAAILSNELPKLIQSMKFPKKMTYDD-----SGVEYARPIRWLVSLY- 487 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++ ++ NI++GHR P +++ S + Y+ L +A V++ + RR Sbjct: 488 ----GTSVVPFSFGKVSASNISWGHRQLDPREVQIPSCERYVDTLRDACVIVSHKERRE- 542 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + S+ + + + LLEE + L E V G FD ++ LP+EL+ + +Q Sbjct: 543 IIEQGLKSHSSDNVSPITNPRLLEETVFLTEHPFVTCGQFDPEFCSLPKELLIAEMVNHQ 602 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 K F T+ R + N FILV + +D I+QGN + + RL D + +D Sbjct: 603 KYFPTQNRAQQITNQFILVCDNCPND---IIIQGNEKALTPRLTDGAFLFAQD------- 652 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA- 406 L PL + +L V + +G+ ++V R++ K + L+ Sbjct: 653 -------------LKTPLTTFVDKLK--SVTYFEALGSLYDKVQRLKAHKKIVYPLLPLS 697 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 ++ AI KADL + +V EF ELQG +G+ Y + + AI EHL+ + Sbjct: 698 SEEDINTAIEFCKADLVSAVVNEFAELQGIMGEYYLKHAGLSHASAVAIGEHLRHITYGQ 757 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 V T +SL D+ D L++ + +N +P+ S DPYALRR +L I+ ++ ++I + L Sbjct: 758 TVSTT--GTLLSLLDRFDNLLSCFILNLRPTSSHDPYALRRQSLEILTLLHASEISLDLE 815 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-D 565 + ++L+ F RLK +L D I +L + Sbjct: 816 SLLYHLADNFPSTVEGTSWDKPAVIKDLLAFIWGRLKTFLASLGFSKDEIATVLSDTSEK 875 Query: 566 NLLTIVDLIKHLNEFFSSAKG--EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 N + I+ + + + EK + R+ +ILA + + Sbjct: 876 NPVEIIKSATAIQDMKAHQGAALEKITTTHNRLKKILASLKLSTHKH----------TPM 925 Query: 624 EKRLYAV-ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 E L + S + K L + + I F ++V V E+++ R+ Sbjct: 926 ELDLQEARLQAALDRFDASANIKNKKDYFLCLGELTDDINTFLNEVHVTSGSEELKNLRI 985 Query: 683 SLL 685 LL Sbjct: 986 HLL 988 >gi|33519504|ref|NP_878336.1| glycine-tRNA synthetase, beta subunit [Candidatus Blochmannia floridanus] gi|33517167|emb|CAD83549.1| glycine-tRNA synthetase, beta subunit [Candidatus Blochmannia floridanus] Length = 661 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 184/721 (25%), Positives = 323/721 (44%), Gaps = 94/721 (13%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK-GLSPH 62 FL+ I +E+P++ K +D +I K+ + Y+ + P L + + + + Sbjct: 6 FLVAIGIDELPSKFVKKLGQDFYYHIINEFKKNNIYYKKTYWFSAPRHLAVQSEISIIEN 65 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTIS--DCQIKKDPKKGDVYLAVLRKPKRLI 120 + F + ++ + IK + + RL+ Sbjct: 66 Q-DLSM----------------FCEKN-VDFVNSVNDFIKNKSLNLLLINIINNALNRLV 107 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 + MRWS+ ++ S++RP+ ++ +L ++ ++ Sbjct: 108 HY----------------EMMRWSSVNT-----SFVRPVNTVTVLL-----DTNLVQGNI 141 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAV 239 E I YGHR+ + I + Y L + +++D + R+ I AS + Sbjct: 142 FETEIDRIIYGHRYVKNNKIILGHAKDYPSILSKQGCIIVDYQVRKETIRLAVKEQASKI 201 Query: 240 GLELV-EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE-- 296 G + D+ L+EI LVEW V G F+K++L LP ELI +K NQK F ++ Sbjct: 202 GGAIDERDEKFLDEITSLVEWPVVLCGKFNKRFLELPNELIIHIMKCNQKYFPVYDQKSI 261 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 +L FI+V N +D I+ G+ ++ RL DA +F K+D Sbjct: 262 NILLPYFIVVVNTITNDYSK-IIAGHENIIKMRLMDAEYFIKKDSRY------------- 307 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 L + +L +VFH+K+G+ ++V+RI L IA+ I D+ RA Sbjct: 308 -------RLIDYIPKLK--SIVFHSKLGSILDKVNRITELAGWIAEQIHEDIIDSKRAAY 358 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L K DL T++V EFPE+QG IG YA E+ A +EH +P+ + +P IS Sbjct: 359 LCKCDLVTDVVLEFPEVQGIIGMYYARRDRESEKVAIAQKEHYQPKYVTDKLPMECISCI 418 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 VS+AD++DT+ + I E P+GS+DP+ L+RA GI+ I ++ KI + L I Sbjct: 419 VSIADRIDTISGIFGIQEFPTGSRDPFGLKRAATGILNIFIQKKISLNLLNLIHKSVMLY 478 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ F RL LY + + ++++++L + N+ D I +N F Sbjct: 479 GPKLINVEDIKNHIYSFMCKRLGLYYYSLGYKKNIVKSVLNTDISNIAYCNDRIDTINSF 538 Query: 581 FSSA--KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 ++ + KRI IL ++ + +I ++ LL + + RL+ I++F I Sbjct: 539 YNMKIVECAMINTLYKRISNILKNQKIYHCKIE-DVDVTILLYK-DMRLFEKITEFDRTI 596 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + D Y I + + ++ + F D VL+ DD+ ++ NRL LL IK +I V+++ Sbjct: 597 RLLFDKNCYDIILEEMVNLSKLTHNFIDTVLILHDDQLIKTNRLILLNVIKKLIYTVVDI 656 Query: 699 Q 699 Sbjct: 657 S 657 >gi|206896274|ref|YP_002246853.1| glycyl-tRNA synthetase, beta subunit [Coprothermobacter proteolyticus DSM 5265] gi|206738891|gb|ACI17969.1| glycyl-tRNA synthetase, beta subunit [Coprothermobacter proteolyticus DSM 5265] Length = 669 Score = 382 bits (980), Expect = e-103, Method: Composition-based stats. Identities = 161/722 (22%), Positives = 313/722 (43%), Gaps = 77/722 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L E+ EE+P + + L K+ G+ ++ ++ + TP R L L GL Sbjct: 2 DLLFELGFEEMPPSHLKALKQQVMERLEPTFKDYGLSFETVKTFLTPRRFALLLGGLPEK 61 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + GP G+ K A++ F++S G+ + + +I ++ K VY Sbjct: 62 QAVVEKMIKGPPKSACYMPDGSIKPALEKFMQSNGVSS-DNIRIIEENGKSYVYAFKTE- 119 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +VL ++ + +PKSMRW + + RP++ I+ + +++ Sbjct: 120 GGKDACEVLPALLEDLFTDLWFPKSMRWGQG------YVFGRPVRWIVAL-----VDDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRD-LEEAMVLLDPECRRNAILNDAHR 234 + ++L + ++ G R +++ HY + E+ +++ D RR+ I N A + Sbjct: 169 LHIELFGVKSNRVSRGLRVFGSD-VEIDIPGHYEQLEKEKGLIIADENKRRDLIRNQAEK 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA+ + + ++LLEE+ + E+ F+G F+ ++L LP++++ + +Q+ Sbjct: 228 LAAELNGKPHLPEELLEELTFINEYPTGFVGHFEDRFLQLPKKVLETVMIHHQRYVAVEN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI N S+ ++ GN RV+ AR DAL F + D Sbjct: 288 EQGQLLPYFIGFRNG-PSENIQQVIVGNERVIRARFYDALFFVEED-------------- 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L P R+ L+ + F GT ++V+R++ + +A + L+ Sbjct: 333 ------LKTPFADRVQGLER--ISFLGNYGTLLDKVNRVK---RLLALFNKENDLLLQSL 381 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L ADL T +V+E PEL G +G YA + IEE + P + S Sbjct: 382 AELYNADLTTLMVQELPELHGYMGTFYAKRSGVEEPLANLIEE-------VVTEPRVENS 434 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE-------NKIDIPLSQ 527 + + D LDT+ + + PSGS DP L+ ++ +I + + + + Sbjct: 435 AIIKVLDALDTIFAGFDMGFVPSGSSDPMGLKGLAFDVLDLICKFFPERSVKDLVLGAAS 494 Query: 528 FIEDQNLI----LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD-LIKHLNEFFS 582 + +NL+ FF DRL ++ ++IR + AI+ D + + +++ L +F++ Sbjct: 495 ILGKENLVAAVEEFFLDRLDSWIECKEIR--VKNAIMDRALDKPIGMFPIMVEVLGQFWT 552 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI--SDFGTHIQE 640 + L+ +RI I+ N+E P + RL+ + Sbjct: 553 GTMVQNIALAHRRIRNIIR-----NQEAHASFDPAIGSEN-DLRLHESFLNNGIRIDSLN 606 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + ++ + L ++ + + +FD+ LV +D +VR NR++LL + N+ Sbjct: 607 VVTKDGLMKVLEYLTALSDDVHEYFDKELVMAEDVKVRQNRVALLMAVDNLFSRFAYFGD 666 Query: 701 IV 702 +V Sbjct: 667 LV 668 >gi|111221456|ref|YP_712250.1| glycyl-tRNA synthetase [Frankia alni ACN14a] gi|111148988|emb|CAJ60668.1| Glycyl-tRNA synthetase (GlyRS) [Includes: Glycyl-tRNA synthetase alpha chain (Glycine--tRNA ligase alpha chain); Glycyl-tRNA synthetase beta chain (Glycine--tRNA ligase beta chain)] [Frankia alni ACN14a] Length = 1069 Score = 378 bits (971), Expect = e-102, Method: Composition-based stats. Identities = 170/797 (21%), Positives = 300/797 (37%), Gaps = 141/797 (17%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 L EI +EE+PA + A + L+ L + + ++R TP R+ + ++P Sbjct: 309 ATLLFEIGTEELPAAEVTRTAAAVRAGLLDRLAATRLTHGDVRVQGTPRRIVAIVDDVAP 368 Query: 62 HSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+ GPRV A KA GF R G + + V Sbjct: 369 REPDVERVVRGPRVAAAYDAAGAPTKAAVGFARGQGADPADLQVVTHRDV--EHVALVRT 426 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R DVL ++ + + ++MRW+ S+ RP++ ++ +L E Sbjct: 427 EAGRDATDVLAEVLGELVAGLRAERNMRWNDPE-----LSFSRPVRWLVALL-----GET 476 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + + + G T GHR PI+V S D Y L +LLDP RR+ +L A + Sbjct: 477 VVPVAVSSLAAGRTTVGHRRAGSPPIEVASADGYPELLATRSILLDPAVRRDLVLEQAAK 536 Query: 235 LASAVGLELVEDKDLLE--EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + G + D D E+ LVE+ + +G+F+ ++L LP E++ ++ +Q+ Sbjct: 537 LTADTGGHIDPDADADTLAEVTNLVEFPRPLLGAFEARFLELPAEILTTVMRKHQRYLPV 596 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R G L F+ V++ Q D A + GN V+ AR DA F+ D P Sbjct: 597 RDAAGRLLPAFVAVADGQVDD--ALVRAGNEDVIRARFTDAAFFYDADVKVAPETF---- 650 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 R ++ + F ++G+ +R RI L + + I D A Sbjct: 651 ------------------RAELAKLTFEQRLGSVADRADRIGALARALGDEIGLGADDRA 692 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA L+K DL T++V E L G + +EYA E + A+ E PR +++P Sbjct: 693 TLDRAATLAKFDLATQMVVELSSLAGTMAREYARRAGEPEAVATALYEMELPRRAGDDLP 752 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYA-----------------LRRATLGI 512 ++LAD+LD L+ +A++ P+GS DP+ L + Sbjct: 753 ATVAGSLLALADRLDLLVGLFALDAAPTGSSDPFGLRRAALGAAAILGSRPELAGLAVAD 812 Query: 513 IRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + +P+S+ F R L D + H L+ A+ P Sbjct: 813 VLARAARLTPVPVSE-QALAAAEAFLRGRYTQQLLDSGVDHRLVGAV-GPLTGTPARAAA 870 Query: 573 LIKHLNEFFSSAKGEKFL------------------------------------LSAKRI 596 + L + + +R+ Sbjct: 871 TLATLRGLIAVPAAATSAGEASSATPSTPSTPSTPSTPSTPSTTGDQVAFAALAAALQRV 930 Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI------------------ 638 +I+ + + + L A RL AV++ + Sbjct: 931 RRIVPA------DAPAILDGERLTEPAAARLLAVVTALAERLGARAGSPAPVVADSPVVG 984 Query: 639 -----------QESMDHKRYHQIGDLLH---SICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + + + +G+L+ + I+ FFD ++V D +R RL L Sbjct: 985 DAPVVGDVAAGSGASANPAFVPLGELVAAAGELPAAIDGFFDALMVMDPDPALRAARLGL 1044 Query: 685 LQYIKNIILIVINVQKI 701 L I+++ ++ + + Sbjct: 1045 LARIRDLTAGTLDWEAL 1061 >gi|67906631|gb|AAY82727.1| hypothetical protein [uncultured bacterium eBACmed86H08] Length = 544 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 168/564 (29%), Positives = 266/564 (47%), Gaps = 49/564 (8%) Query: 155 WIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE 214 W RPLKSIL K+++ + N TY + K + Y + Sbjct: 4 WGRPLKSILACF-----DYKVLEFSYHHLNSSNFTYLDKDFEEKTNKFSNFKTYKEFFKS 58 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 ++LD R I N + L+L +K LL E+ +VE + FDK++L + Sbjct: 59 KGIILDHNKREEFIENQLLKKTKLDRLKLTPNKKLLTEVTNIVEKPNIIKCKFDKRFLKI 118 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E++ T++ +QK F T + L N F +V++ SD I GN RVV ARL DA Sbjct: 119 PKEILVTTMEVHQKYFPTFDNKDNLTNVFFVVADN--SDTKGLIKLGNERVVEARLNDAQ 176 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 FW +++ K L + ++ L +V + +GT ++ R+R Sbjct: 177 FFWDKNKT--------------------KNLVKGISDLK--NVNYFEGLGTYFDKTQRLR 214 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 LG I+ + V+ A + K DL +++V EFPELQG +G +A Q + C A Sbjct: 215 KLGSLISDELLISKEKVEVASSICKVDLVSDLVGEFPELQGVMGGHFAKAQGFDNETCLA 274 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 I EH P GP P S+T++L+DK+DTL+ F+ IN KPS SKDPYALRR+ +G+IR Sbjct: 275 ISEHYLPTGPETKTPKKPYSVTLALSDKIDTLVGFFTINLKPSSSKDPYALRRSAIGLIR 334 Query: 515 IILENKIDIPLSQFIED------------------QNLILFFHDRLKLYLHDRDIRHDLI 556 +I+ENK++I L I Q+L+ FF +RLK Y+ ++ +R D+I Sbjct: 335 LIIENKLEIKLKDLINYSCILFAEQDLDFDIKTVQQDLLNFFSERLKFYMKEKKVRPDII 394 Query: 557 EAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEI 614 E + D + I + LN+ G+ + S KR IL+ E KN+ E+ Sbjct: 395 ECSINSYSADQIYKIYNKAFILNKLIDKNIGQDVIFSYKRASNILSNEISKNKIELENST 454 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 P + EK+LY I + + + + ++L + FFD +VN ++ Sbjct: 455 DPGLFKNDFEKKLYKKIQELRKYFTSLGSREDCKKTLEVLADAKTDVSNFFDNGIVNDEE 514 Query: 675 REVRDNRLSLLQYIKNIILIVINV 698 ++ L L+Q + +N Sbjct: 515 EAIKKIGLELMQLLGKTFNNYLNF 538 >gi|329943164|ref|ZP_08291938.1| glycyl-tRNA synthetase, alpha subunit [Chlamydophila psittaci Cal10] gi|332287745|ref|YP_004422646.1| glycyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|313848316|emb|CBY17319.1| glycyl-tRNA synthetase alpha chain [Chlamydophila psittaci RD1] gi|325506997|gb|ADZ18635.1| glycyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|328814711|gb|EGF84701.1| glycyl-tRNA synthetase, alpha subunit [Chlamydophila psittaci Cal10] gi|328915000|gb|AEB55833.1| glycyl-tRNA synthetase, alpha/beta subunit [Chlamydophila psittaci 6BC] Length = 1005 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 167/722 (23%), Positives = 309/722 (42%), Gaps = 87/722 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FLLEI +EE+PA + L + LL + + Y ++ +P RL L + L P Sbjct: 315 NFLLEIGAEELPATFVPIGIQQLESLAKKLLSDYNIGYDSLEVLGSPRRLALLIYNLEPT 374 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQI-------KKDPKKGDV 108 + +K E+ GP + G + F + + ++ ++ Sbjct: 375 AIQKAVEKKGPILSSLFSDSGDVTTQGEQFFATHHVDIRHYSELSQHSLFDIREINGVQY 434 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 + + ++ +L +P IQ + +PK M + S + RP++ ++ + Sbjct: 435 LFLLHPEVRKDTAVILSNELPKLIQSMKFPKKMTYDD-----SGVEYARPIRWLVSLY-- 487 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++ ++ NI++GHR P +++ S + YI L +A V++ + RR I Sbjct: 488 ---GTSVLPFSFGKVSASNISWGHRQLDPREVRIPSCERYIDTLRDACVIVSHKERRE-I 543 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + +L S+ + + + LLEE + L E V G FD ++ LP+EL+ + +QK Sbjct: 544 IEQGLKLHSSDSVSPITNPRLLEETVFLTEHPFVTCGQFDPEFCSLPKELLIAEMVNHQK 603 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F T+ + N FILV + +D I+QGN + + RL D + +D Sbjct: 604 YFPTQNTVQQITNQFILVCDNCPND---IIIQGNEKALTPRLTDGAFLFAQD-------- 652 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-D 407 L PL + +L V + +G+ ++V R++ + L+ Sbjct: 653 ------------LKTPLTTFVDKLK--SVTYFEALGSLYDKVQRLKAHKNIVYPLMPLSS 698 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 ++ AI KADL + +V EF ELQG +G+ Y + + AI EHL+ + Sbjct: 699 EEDINTAIEFCKADLVSAVVNEFAELQGIMGEYYLKHAGLSHASAVAIGEHLRHITYGQT 758 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 + T +SL D+ D L++ + +N +P+ S DPYALRR +L I+ ++ +++ + L Sbjct: 759 ISTT--GTLLSLLDRFDNLLSCFILNLRPTSSHDPYALRRQSLEILTLLHASEVSLDLEN 816 Query: 528 FIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DN 566 + ++L+ F RLK +L D I +L + N Sbjct: 817 LLYHLADNFPSTVEGTSWDKPAVIKDLLAFIWGRLKTFLASLGFSKDEIATVLSDTSEKN 876 Query: 567 LLTIVDLIKHLNEFFSSAKG--EKFLLSAKRIFQILAIEEKK-NREISLEISPQYLLLEA 623 + I+ + E ++ EK + R+ +ILA + N+ S+E+ Sbjct: 877 PVEIIKSATAIQEMKANQGATLEKITTTHNRLKKILASLKLPTNKHTSMEL--GL----Q 930 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E RL A + F + + L + + I +F ++V V E+++ R+ Sbjct: 931 EGRLKAALDQFDASANIKNKKEYFL----CLGELADNINLFLNEVHVTSGSEELKNLRIH 986 Query: 684 LL 685 LL Sbjct: 987 LL 988 >gi|257464111|ref|ZP_05628494.1| glycyl-tRNA synthetase beta chain [Fusobacterium sp. D12] gi|317061628|ref|ZP_07926113.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. D12] gi|313687304|gb|EFS24139.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. D12] Length = 524 Score = 375 bits (963), Expect = e-101, Method: Composition-based stats. Identities = 149/537 (27%), Positives = 263/537 (48%), Gaps = 48/537 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EE PAR A DL I K E + + + Y TP RL L + ++ Sbjct: 3 LLFEIGMEENPARFLEAALADLKKNFIQKCKAERISHGEVNIYGTPRRLILCAEDVAEQQ 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E +GP G +A GF +S G++ + I+ D KG+ A Sbjct: 63 EDLNELNIGPAKSIAFLNGEITRAGIGFAKSQGIEPVDLEIIQTD--KGEYIAARKALKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + + +L ++ + ++ +PKSM+WS + RP++ L + A ++++ Sbjct: 121 QATKLLLPELLKSLVLELSFPKSMKWSDLK-----IRFARPIEWFLAM-----ADSEVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ + N + GHRF +V S++ Y + E V++D E R+ I + + Sbjct: 171 FEIEGMKSSNRSKGHRFFG-KEFEVASVEDYFIKIRENNVIIDIEERKKMIREEILSKIA 229 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 ++V ++ LL E+ LVE+ +GSF+ +L +P+E++ ++++ +Q+ F + G Sbjct: 230 EDE-QVVIEEGLLAEVTNLVEYPYPIVGSFNSDFLEVPQEVLIISMEVHQRYFPILDKHG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L F+++ N + + GN +V++ARL DA F+K D N Sbjct: 289 KLLPKFVVIRNGI--EDSDNVRIGNEKVLSARLADARFFYKEDLRN-------------- 332 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--ALVDRAI 415 PL+ + +L VVF +G+ +++ RI+ + + + + + V R Sbjct: 333 ------PLEHNVEKLK--HVVFQKDLGSIYQKIIRIQEICEFLLSKLQLEEKRETVLRTA 384 Query: 416 VLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L+KADL + ++ +EF +LQG +G +YA+ E I EH PR + +P Sbjct: 385 YLAKADLVSNMIGEKEFTKLQGFMGADYALKFGEKEEVSKGIREHYYPRFQGDELPQGTE 444 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I V +AD+LDTL+ + + PSGSKDP+ALRRA LGI+ IIL ++++I L ++ Sbjct: 445 GILVGIADRLDTLVGCFGVGVIPSGSKDPFALRRAALGIVNIILHSELEISLRDLVK 501 >gi|256112928|ref|ZP_05453836.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] Length = 511 Score = 375 bits (962), Expect = e-101, Method: Composition-based stats. Identities = 215/509 (42%), Positives = 288/509 (56%), Gaps = 73/509 (14%) Query: 266 SFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV---------------LANCFILVSNIQ 310 F++++L +P E+IRLTI+ NQKCFVTR + L+N FILVSN+ Sbjct: 1 EFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDASRLASPAPQHEEIQALSNKFILVSNVA 60 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF LDL KPLDQRMA Sbjct: 61 ARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGLDLKKPLDQRMA 120 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 RLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+KADL TE+V EF Sbjct: 121 RLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAKADLQTEVVGEF 180 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+LADKLDTL+ FW Sbjct: 181 PELQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVALADKLDTLVGFW 240 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-----------EDQNLILF-- 537 AI+EKP+GSKDPYALRRA LG+IR++L + PL + L F Sbjct: 241 AIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEGQMQRKLREFEA 300 Query: 538 ---------------FHDRLKLYLHD------------------------------RDIR 552 + L Y + R Sbjct: 301 KLAAENSGDVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDRFKVHLKEEGAR 360 Query: 553 HDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 +D I+A+L PE DNLL + ++ L F + G+ L AKR ILA EEKK +++ Sbjct: 361 YDAIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILAAEEKKGTKVAD 420 Query: 613 EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNV 672 + P L EK L+ ++ + E++ + ++ L + P++IFFD+VLVN Sbjct: 421 RVDPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPVDIFFDKVLVND 480 Query: 673 DDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D VR NRL+LL I+ V + KI Sbjct: 481 EDGNVRANRLALLDQIRAATGKVADFSKI 509 >gi|32491343|ref|NP_871597.1| hypothetical protein WGLp594 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166550|dbj|BAC24740.1| glyS [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 694 Score = 372 bits (954), Expect = e-100, Method: Composition-based stats. Identities = 182/721 (25%), Positives = 319/721 (44%), Gaps = 62/721 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P+ +K ++ + L + Y+N++ + RL + + Sbjct: 5 FLIEIGTEELPSYCLNKISKSFCESIKKQLFLSKIEYKNIKWLSSSRRLAVQADLYIYKT 64 Query: 64 PEKIEERLGPRVGAGKKAIDG-----FLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 + GPR+ +K I +++ G+ T IK KKG K Sbjct: 65 KNSYILKKGPRIKN-EKDIYNINVKMWIKKFGISTKQIKLIK--NKKGVWVSYKACNKKY 121 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 + + L I+ ++++V PK M+WS + F +IRP+ SI +L +KII Sbjct: 122 NLFNKLFDIIKSSLEEVYVPKKMKWSNYN-----FQFIRPVHSITALL-----DDKIIPG 171 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEA-MVLLDPECRRNAILNDAHRLAS 237 + +I G + I + + Y L + +++D + R+N I Sbjct: 172 KIFDINIDRNLLGIFYKKRQKIVLNNAVDYENALLKNFNIIVDYKKRKNIINEKIKLEEK 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +++++ LEEI LVE + G+F K +L +P ++I + QKCF + Sbjct: 232 KFKGKVLKNDKFLEEITSLVEIPNIISGNFKKSFLKIPVKIIENILCNIQKCFPVYEKNK 291 Query: 298 -VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L FI V N +G I++ N V+ RL D F K D Sbjct: 292 QNLLPKFIFVING-NKNGVERIIKDNENVINNRLLDVEFFIKID---------------- 334 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 L L R+ +L+ ++FH +G+ E+ RI++L I+ I+ + V RA + Sbjct: 335 ----LQTKLKDRICKLN--SIIFHDNLGSLKEKTIRIKLLSICISNKINGNYKYVSRASL 388 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L K DL T +V EFP QG IG+ Y+ + E+ A EH PR + +PTN S Sbjct: 389 LCKCDLTTNMVFEFPTTQGIIGEYYSEINMESKEVSLAQREHYYPRFSKDILPTNLTSQI 448 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 +S+ADKLDT++ + I P+G KDP+ L+R +LGIIRII+E K+ I ++ I+ Sbjct: 449 ISIADKLDTIVGIFGIKLYPTGKKDPFCLKRLSLGIIRIIIEKKLSININHIIDKSISLY 508 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE--NDNLLTIVDLIKHLNE 579 + ++ FF RL ++ +I++++ + L + I ++ Sbjct: 509 SFKLTNENLKKEVLEFFLKRLISLY-EKKYNPCIIKSVISFKKIPSCLYDLDKKIYNIVY 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKRLYAVISDFGTHI 638 F L S KRI IL I K +++ L + + E F Sbjct: 568 FIEKNDISIILKSYKRIKNILKISNKSSKKNFLLKNNFLNKNDIIELSFKRYFDYFEKKF 627 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y ++ LL + + I+ + D + + ++++++ R+ +L+ I N L + + Sbjct: 628 SNLLIEKNYLKLLILLKQLSKKIDKYLDNIKIFTNNKDIKKYRIKILKKILNFYLYIADF 687 Query: 699 Q 699 Sbjct: 688 S 688 >gi|254713028|ref|ZP_05174839.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M644/93/1] Length = 509 Score = 372 bits (954), Expect = e-100, Method: Composition-based stats. Identities = 214/507 (42%), Positives = 287/507 (56%), Gaps = 73/507 (14%) Query: 268 DKKYLCLPEELIRLTIKTNQKCFVTRTREGV---------------LANCFILVSNIQAS 312 ++++L +P E+IRLTI+ NQKCFVTR + L+N FILVSN+ A Sbjct: 1 EEEFLAIPPEVIRLTIRANQKCFVTRKQGDASRLASPAPQHEEIQALSNKFILVSNVAAR 60 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF LDL KPLDQRMARL Sbjct: 61 DGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGLDLKKPLDQRMARL 120 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 D L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+KADL TE+V EFPE Sbjct: 121 DALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAKADLQTEVVGEFPE 180 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+LADKLDTL+ FWAI Sbjct: 181 LQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVALADKLDTLVGFWAI 240 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-----------EDQNLILF---- 537 +EKP+GSKDPYALRRA LG+IR++L + PL + L F Sbjct: 241 DEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEGQMQRKLREFEAKL 300 Query: 538 -------------FHDRLKLYLHD------------------------------RDIRHD 554 + L Y + R+D Sbjct: 301 AAENSGDVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDRFKVHLKEEGARYD 360 Query: 555 LIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI 614 I+A+L PE DNLL + ++ L F + G+ L AKR ILA EEKK +++ + Sbjct: 361 AIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILAAEEKKGTKVADRV 420 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 P L EK L+ ++ + E++ + ++ L + P++IFFD+VLVN +D Sbjct: 421 DPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPVDIFFDKVLVNDED 480 Query: 675 REVRDNRLSLLQYIKNIILIVINVQKI 701 VR NRL+LL I+ V + KI Sbjct: 481 GNVRANRLALLDQIRAATGKVADFSKI 507 >gi|225453368|ref|XP_002270774.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1456 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 133/574 (23%), Positives = 260/574 (45%), Gaps = 52/574 (9%) Query: 143 WSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKV 202 W + + RP++ IL + + ++ + GN++YG R + IKV Sbjct: 913 WDSKKLRREEVMFSRPIRWILAL-----HGDVVVPFMFAGVLSGNLSYGLRNTSSATIKV 967 Query: 203 QSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQV 262 +S + Y + A + LD E R+ IL + LA V ++ LL+E++ LVE Sbjct: 968 ESAESYATVIRNAGISLDIEERKQTILEQCNALAKGVNGHILLQGSLLDEVVNLVEAPVP 1027 Query: 263 FMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGN 322 +G F + +L LP++L+ + ++ +QK F G L FI V+N ++ + +GN Sbjct: 1028 VIGKFKESFLELPKDLLTMVMQKHQKYFAITDDSGRLLPYFITVANGAINEM--VVRKGN 1085 Query: 323 SRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAK 382 V+ AR EDA F++ D K + ++L+ ++FH K Sbjct: 1086 EAVLRARYEDAKFFYEMDTR--------------------KKFSEFRSQLE--GILFHEK 1123 Query: 383 IGTQGERVSRIRVLGKK--IAQLIDADVAL-VDRAIVLSKADLCTEIVREFPELQGKIGK 439 +GT +++ R++ + + +A ++ D + A L+ +DL T +V EF L G + + Sbjct: 1124 LGTMLDKMIRVQNMVAELSLALQVNEDKLQIIQDAASLAMSDLATAVVTEFTSLSGIMAR 1183 Query: 440 EYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGS 499 YA+ + +A+ E PR + VP + I +++AD+LD+L+ + +PS + Sbjct: 1184 HYALRDGYSEQIAEALFEITLPRNSGDIVPKTDVGIVLAVADRLDSLVGLFGAGCQPSST 1243 Query: 500 KDPYALRRATLGIIRIILENKIDIPLS--------------QFIEDQNLILFFHDRLKLY 545 DP+ LRR + G++++++E ++ L + ++ F RL+ + Sbjct: 1244 NDPFGLRRISYGLVQVLVEKDKNLDLRHALQLAAAVQPITIEANIIDDVHQFVTRRLEQF 1303 Query: 546 LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK 605 L DR+I +++ +IL + ++ K + + R +I+ Sbjct: 1304 LVDREISPEVVRSILTERANWPCLATKSAYKMDAMSRGELLPKVVEAYSRPTRIVR---G 1360 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 K+ E +E+ E+ L+ I ++ + + L P+E FF Sbjct: 1361 KDVEADMEVDEASFETNEERALWRAFLSVRNKIYPGIEVDDFFEASSQLLQ---PLEDFF 1417 Query: 666 DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + V V V++ +R NRL+LL+ I ++ + ++ Sbjct: 1418 NNVFVMVEEERIRKNRLALLKKIADLPKGIADLS 1451 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+P + A++ L +++ LL ++ + + ++ + TP RL + +K LS Sbjct: 390 FLLEIGTEELPPQDVASASQQLKDLIMQLLDKQRLGHSEVQAFGTPRRLVVCVKNLSTKQ 449 Query: 64 PEKIEERLGPRVG-------AGKKAIDGFLRSTGLQTISD 96 E E GP V KA +GF R + S Sbjct: 450 AENEVEVRGPPVSKAFDGQRNPTKAAEGFCRRYCVSLDSL 489 >gi|261320734|ref|ZP_05959931.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M644/93/1] gi|265994363|ref|ZP_06106920.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] gi|261293424|gb|EEX96920.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M644/93/1] gi|262765476|gb|EEZ11265.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] Length = 505 Score = 368 bits (944), Expect = 2e-99, Method: Composition-based stats. Identities = 213/503 (42%), Positives = 283/503 (56%), Gaps = 73/503 (14%) Query: 272 LCLPEELIRLTIKTNQKCFVTRTREGV---------------LANCFILVSNIQASDGGA 316 + +P E+IRLTI+ NQKCFVTR + L+N FILVSN+ A DGG Sbjct: 1 MAIPPEVIRLTIRANQKCFVTRKQGDASRLASPAPQHEEIQALSNKFILVSNVAARDGGT 60 Query: 317 AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLD 376 I GN +VV ARL DAL+FW DQ++LP+L L SA KF LDL KPLDQRMARLD L+ Sbjct: 61 EIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGLDLKKPLDQRMARLDALN 120 Query: 377 VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGK 436 V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+KADL TE+V EFPELQG Sbjct: 121 VTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAKADLQTEVVGEFPELQGA 180 Query: 437 IGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKP 496 +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+LADKLDTL+ FWAI+EKP Sbjct: 181 MGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVALADKLDTLVGFWAIDEKP 240 Query: 497 SGSKDPYALRRATLGIIRIILENKIDIPLSQFI-----------EDQNLILF-------- 537 +GSKDPYALRRA LG+IR++L + PL + L F Sbjct: 241 TGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEGQMQRKLREFEAKLAAEN 300 Query: 538 ---------FHDRLKLYLHD------------------------------RDIRHDLIEA 558 + L Y + R+D I+A Sbjct: 301 SGDVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDRFKVHLKEEGARYDAIDA 360 Query: 559 ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY 618 +L PE DNLL + ++ L F + G+ L AKR ILA EEKK +++ + P Sbjct: 361 VLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILAAEEKKGTKVADRVDPAL 420 Query: 619 LLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 L EK L+ ++ + E++ + ++ L + P++IFFD+VLVN +D VR Sbjct: 421 LREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPVDIFFDKVLVNDEDGNVR 480 Query: 679 DNRLSLLQYIKNIILIVINVQKI 701 NRL+LL I+ V + KI Sbjct: 481 ANRLALLDQIRAATGKVADFSKI 503 >gi|312906133|ref|ZP_07765145.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis DAPTO 512] gi|310627779|gb|EFQ11062.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis DAPTO 512] Length = 438 Score = 363 bits (932), Expect = 6e-98, Method: Composition-based stats. Identities = 135/469 (28%), Positives = 231/469 (49%), Gaps = 48/469 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T + K+ + Sbjct: 61 PEKQVDVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED--IVFKELNGVEYVYVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++VL + I + +P +M W+ F +IRP+ I+ +L Sbjct: 119 KFTKGQSAKEVLTK-LNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N + +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGD-NVHLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREH 432 >gi|254696833|ref|ZP_05158661.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|260761227|ref|ZP_05873570.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|260671659|gb|EEX58480.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 2 str. 86/8/59] Length = 487 Score = 357 bits (915), Expect = 5e-96, Method: Composition-based stats. Identities = 198/461 (42%), Positives = 263/461 (57%), Gaps = 58/461 (12%) Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF Sbjct: 25 LSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFG 84 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+ Sbjct: 85 LDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLA 144 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+ Sbjct: 145 KADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVA 204 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--------- 529 LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + PL Sbjct: 205 LADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQE 264 Query: 530 --EDQNLILF-----------------FHDRLKLYLHD---------------------- 548 + L F + L Y + Sbjct: 265 GQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHD 324 Query: 549 --------RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 R+D I+A+L PE DNLL + ++ L F + G+ L AKR IL Sbjct: 325 RFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANIL 384 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 A EEKK +++ + P L EK L+ ++ + E++ + ++ L + P Sbjct: 385 AAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGP 444 Query: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 445 VDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKI 485 >gi|320539962|ref|ZP_08039621.1| putative glycine tRNA synthetase, beta subunit [Serratia symbiotica str. Tucson] gi|320030148|gb|EFW12168.1| putative glycine tRNA synthetase, beta subunit [Serratia symbiotica str. Tucson] Length = 403 Score = 357 bits (915), Expect = 5e-96, Method: Composition-based stats. Identities = 129/434 (29%), Positives = 204/434 (47%), Gaps = 43/434 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + A + L+ + + ++ + TP RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAGAFAANFTTELENANLEHGSVSWFATPRRLALKVANLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++I E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADRIVEKRGPAISQAFDATGKPNKAAEGWARGGGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L ++V A+ K+P PK MRW S ++RP+ ++ +L AE + Sbjct: 123 KGQPVQQLLASMVNTALSKLPIPKLMRWGD-----SEVQFVRPVHTVTLLLGAE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + + GHRF + + DHY + LE V+ D E R+ I D+ R Sbjct: 173 IPGSVLGVESARTIRGHRFMGETEFTLDNADHYPQILLERGKVIADYEARKALIKRDSER 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + + LLEE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 233 AAAKIGGKADLSESLLEEVASLVEWPVVLTAKFEEEFLAVPAEALVYTMKGDQKYFPVYG 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 SAGNLLPNFIFVANIESKD-PQQIITGNEKVVRPRLADAEFFFNTDR------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RLD V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 339 -------KKRLEDHLPRLDT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVR 428 +LSK DL T +V Sbjct: 390 GLLSKCDLMTNMVF 403 >gi|149193978|ref|ZP_01871076.1| glycyl-tRNA synthetase subunit beta [Caminibacter mediatlanticus TB-2] gi|149135931|gb|EDM24409.1| glycyl-tRNA synthetase subunit beta [Caminibacter mediatlanticus TB-2] Length = 471 Score = 352 bits (902), Expect = 2e-94, Method: Composition-based stats. Identities = 130/512 (25%), Positives = 244/512 (47%), Gaps = 49/512 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA ++ + +L+E + N ++TP RL L+ + Sbjct: 5 LLVEIGVEELPAIPFLNELPNIEKKWLNILEEYNLKT-NFEFFYTPRRLVLWHREFPIKQ 63 Query: 64 PEKIEERLGPRVGAGKK---AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + +E G +K A+ GF + + K+ + + Sbjct: 64 EDIEKEIWGAPKSIVEKNKNALLGFAKKNNINVEDVQY--KEKNGQEFLYYKTLIKGKES 121 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++L ++ ++ + + K+M+W +IRP++ ILC+L +++ I Sbjct: 122 KELLPEMIEKWLKSLNFGKTMKWGRCEE-----EFIRPIRWILCML-----EDEAITFKK 171 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 N T HR I + + Y +L++ V++ + R+ IL + + Sbjct: 172 FCTTSSNFTLPHRVFKEK-IFIDFVGKYFCELDKKGVIVFQKERKEKILREIKEIEKKED 230 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 +++ D +LL+EI+ + E+ +G FD+++L LP+E+I ++K +Q+ F + L Sbjct: 231 VKVEIDNELLDEIVAITEYPTALIGKFDEEFLALPQEVIITSMKEHQRYFPVY-KNNRLT 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FI+VSN +D I++GN +V+ ARL DA+ F+K D ++ LK Sbjct: 290 NAFIVVSNA-FTDNFEYIIKGNEKVLRARLSDAMFFYKNDLKKGLSIEGLK--------- 339 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 ++VF K+G+ ++V R +G+ +A + D + +AI L+KA Sbjct: 340 ---------------NIVFMDKLGSLYDKVKREEKIGEYLADEFNLDKEKIKKAINLAKA 384 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EF ELQG +G YA+ QNE+ AI+E ++ TNKIS ++++ Sbjct: 385 DLLSEMVYEFTELQGIMGYYYALAQNEDKEIAIAIKEQY------TDIATNKISAILNIS 438 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGI 512 LDT++ ++I + P G+KD ++++ Sbjct: 439 KNLDTILGLFSIGKIPKGNKDLIWIKKSCKSY 470 >gi|330976411|gb|EGH76467.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 434 Score = 350 bits (898), Expect = 5e-94, Method: Composition-based stats. Identities = 143/467 (30%), Positives = 223/467 (47%), Gaps = 48/467 (10%) Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 K MRW ++RP + ++ + ++++D + G + GHRFH Sbjct: 1 IAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVDCTILAQSAGRHSRGHRFHH 50 Query: 197 PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGL 256 P +++ S Y+ DL A VL D RR I LA+ + LL+E+ GL Sbjct: 51 PQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELAAQQEGTAIVPPSLLDEVAGL 110 Query: 257 VEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGA 316 VEW + SF++++L +P+E + T++ NQK F G L FI V+NI++ D A Sbjct: 111 VEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDGAGKLLPRFITVANIESKD-PA 169 Query: 317 AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLD 376 I+ GN +VV RL DA F+K+D+ + L+ RL + Sbjct: 170 QIIAGNEKVVRPRLTDAEFFFKQDK--------------------KQKLETFNDRLK--N 207 Query: 377 VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGK 436 VVF A++G+ ++ R+ L IA I D RA +LSK DL +E+V EFPE+QG Sbjct: 208 VVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLLSKCDLSSEMVGEFPEMQGI 267 Query: 437 IGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKP 496 G YA E A+ E PRG +PT V++ADKLDTL+ + I P Sbjct: 268 AGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAVAIADKLDTLVGIFGIGMLP 327 Query: 497 SGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---------------QNLILFFHDR 541 +GSKDPYALRRA LGI+RI++E K+D+ L + ++ + ++ F DR Sbjct: 328 TGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQFGAKIKPAGLAEQVLEFIFDR 387 Query: 542 LKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 L+ D + + ++ + + L ++ + F + Sbjct: 388 LRARYEDEGVDVGVYLSVRALQPASALDFDQRVQAVQAFRKLPQAAA 434 >gi|153872572|ref|ZP_02001425.1| glycyl-tRNA synthetase, beta subunit [Beggiatoa sp. PS] gi|152070962|gb|EDN68575.1| glycyl-tRNA synthetase, beta subunit [Beggiatoa sp. PS] Length = 357 Score = 349 bits (896), Expect = 9e-94, Method: Composition-based stats. Identities = 110/370 (29%), Positives = 175/370 (47%), Gaps = 23/370 (6%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M D L+EI +EE+P + K +E L L+++ + Y+N Y TP RL + Sbjct: 1 MSDKRDLLIEIGTEELPPKALKKLSEAFLSGLCRGLEQKQLHYENATPYATPRRLAVLFN 60 Query: 58 GLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 G+ ++ ER GP + G KA GF RS G++ Q++ KG + Sbjct: 61 GVVTKQDQRHIERRGPVLTAAFDKDGQPTKAALGFARSCGVEVNQLEQLE--TPKGTWLV 118 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 +P + ++ I+ A+ +P PK MRW + ++RP+ ++ + Sbjct: 119 HRHTQPGQATATLIPEIIEAALAALPIPKRMRWGDL-----PYEFVRPVHWVVILF---- 169 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +++I+ + + G T GHRFH P PI + + Y + LE V+ R+ I N Sbjct: 170 -GDEVINAKILGVQSGRETRGHRFHHPEPIALTFANTYAKSLEAGHVIASYTTRQAWIKN 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 D A G E V D+DLL E+ LVEW MG++D+ +L +P E + T+K +QK F Sbjct: 229 DVTETALKTGGEAVIDEDLLNEVTSLVEWPVAIMGTYDESFLDIPPEALIATMKGHQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++G L FI VSNIQ+ + GN RV+ RL DA FW +D+ Sbjct: 289 HIVNQQGKLLPYFITVSNIQSRQ-PDVVRTGNERVIRPRLSDAAFFWTQDRKQPLENRLN 347 Query: 351 KESALKFNLD 360 + F ++ Sbjct: 348 PLKTVIFKIN 357 >gi|28572421|ref|NP_789201.1| glycyl-tRNA synthetase [Tropheryma whipplei TW08/27] gi|28410552|emb|CAD66938.1| glycyl-tRNA synthetase [Tropheryma whipplei TW08/27] Length = 1024 Score = 347 bits (891), Expect = 3e-93, Method: Composition-based stats. Identities = 148/755 (19%), Positives = 275/755 (36%), Gaps = 109/755 (14%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L EI +EE+P+ + + L L + ++ TP R+ + + + P Sbjct: 321 LFEIGTEEMPST--QEIITTVENTLREKLGRSQLKFEKYSVDATPRRIVIRIYKMHPRQS 378 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + GP+V A+ GFL++ G ++ P Sbjct: 379 DSSVRIRGPKVEAAFDDDKKPTDALTGFLKANGKSLDEIEIAVHKNRR--HVFITKNIPG 436 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L+ I + ++ ++MRW+ + RP++ ++ + ++ ++ Sbjct: 437 QSAAKLLEQIFAEIVLEIRSSRNMRWNDPK-----LVFSRPIRWLVALY-----GQRQLN 486 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + + G T R + V++ D+Y L V+L RR I A+ A Sbjct: 487 VRVSLLESGMHTRVLRNSKTPIVPVKAADNYEEFLTRNGVILSRSKRREIIFESANLAAK 546 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-- 295 +V E+ +EEI LVE + + F+KKYL LPE ++ +K QK + Sbjct: 547 SVSCEIDFSTQPIEEITDLVEAPSLVICRFEKKYLELPEVVLNAIMKK-QKYITLSEKCA 605 Query: 296 -----------EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 + ++ FI +N + GN V+ R EDAL F + D Sbjct: 606 TCKRIQREKCDQKTISQHFITFANGLCD--KETVRSGNEAVIRTRFEDALFFQEADSKLS 663 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P L + + L V+ K+G+ ++ RI+ + ++ L+ Sbjct: 664 PE-----------------NLYKMLDGL-----VYEEKLGSYLQKSQRIQRITDELLALM 701 Query: 405 DADVALVDRA---IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 AD L + A ++K DL +++V E PEL G + K YA + A+E+ P Sbjct: 702 KADKNLSNTARQSAAIAKFDLASQMVTEMPELSGFMAKIYAQRAGKPPEVAQALEDMEAP 761 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--LEN 519 R +++P + +S+AD+LD L+ A+ +GS D + +RR G++ I+ L Sbjct: 762 RSAGKSLPVTQAGAILSIADRLDQLVAMTALGITSTGSSDLFGVRRTASGLVDILRVLPQ 821 Query: 520 KIDIPLSQFIE---------------------------DQNLILFFHDRLKLYLHDRDIR 552 K D+ + +++ R + + D R Sbjct: 822 KYDLNPIDIRVAVGKVVDIMQGYIMEHRGISNVILDGVEDSIVDLILGRWRHRISDSQSR 881 Query: 553 H------DLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK 606 L + + L L + ++ + + KRI +I + Sbjct: 882 TLSMDTASLQNIVYAAQKTVLSEADKTFSQLCQIRQKSQFLEIVQCLKRIDRICKNFYFE 941 Query: 607 NREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 + L E+ L + ++ E + FFD Sbjct: 942 RNDAP-------LKSVHEQNLINTFEAIRQT-----NCTDLEGFYRAAKNLPEAVNNFFD 989 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 LV + E+R RL LL I++ I Sbjct: 990 NTLVMTPEEEIRTARLGLLCAIRSYSWKYAAWDYI 1024 >gi|28493467|ref|NP_787628.1| glycyl-tRNA synthetase alpha chain and beta chain [Tropheryma whipplei str. Twist] gi|28476508|gb|AAO44597.1| glycyl-tRNA synthetase alpha chain and beta chain [Tropheryma whipplei str. Twist] Length = 1024 Score = 347 bits (891), Expect = 3e-93, Method: Composition-based stats. Identities = 148/755 (19%), Positives = 275/755 (36%), Gaps = 109/755 (14%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L EI +EE+P+ + + L L + ++ TP R+ + + + P Sbjct: 321 LFEIGTEEMPST--QEIITTVENTLREKLGRSQLKFEKYSVDATPRRIVIRIYKMHPRQS 378 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + GP+V A+ GFL++ G ++ P Sbjct: 379 DSSVRIRGPKVEAAFDDDKKPTDALTGFLKANGKSLDEIEIAVHKNRR--HVFITKNIPG 436 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L+ I + ++ ++MRW+ + RP++ ++ + ++ ++ Sbjct: 437 QSAAKLLEQIFAEIVLEIRSSRNMRWNDPK-----LVFSRPIRWLVALY-----GQRQLN 486 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + + G T R + V++ D+Y L V+L RR I A+ A Sbjct: 487 IRVSLLESGMHTRVLRNSKTPIVPVKAADNYEEFLTRNGVILSRSKRREIIFESANLAAK 546 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-- 295 +V E+ +EEI LVE + + F+KKYL LPE ++ +K QK + Sbjct: 547 SVSCEIDFSTQPIEEITDLVEAPSLVICRFEKKYLELPEVVLNAIMKK-QKYITLSEKCA 605 Query: 296 -----------EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 + ++ FI +N + GN V+ R EDAL F + D Sbjct: 606 TCKRIQREKCDQKTISQHFITFANGLCD--KETVRSGNEAVIRTRFEDALFFQEADSKLS 663 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P L + + L V+ K+G+ ++ RI+ + ++ L+ Sbjct: 664 PE-----------------NLYKMLDGL-----VYEEKLGSYLQKSQRIQRITDELLALM 701 Query: 405 DADVALVDRA---IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 AD L + A ++K DL +++V E PEL G + K YA + A+E+ P Sbjct: 702 KADKNLSNTARQSAAIAKFDLASQMVTEMPELSGFMAKIYAQRAGKPPEVAQALEDMEAP 761 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--LEN 519 R +++P + +S+AD+LD L+ A+ +GS D + +RR G++ I+ L Sbjct: 762 RSAGKSLPVTQAGAILSIADRLDQLVAMTALGITSTGSSDLFGVRRTASGLVDILRVLPQ 821 Query: 520 KIDIPLSQFIE---------------------------DQNLILFFHDRLKLYLHDRDIR 552 K D+ + +++ R + + D R Sbjct: 822 KYDLNPIDIRVAVGKVVDIMQGYIMEHRGISNVILDGVEDSIVDLILGRWRHRISDSQSR 881 Query: 553 H------DLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK 606 L + + L L + ++ + + KRI +I + Sbjct: 882 TLSMDTASLQNIVYAAQKTVLSEADKTFSQLCQIRQKSQFLEIVQCLKRIDRICKNFYFE 941 Query: 607 NREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 + L E+ L + ++ E + FFD Sbjct: 942 RNDAP-------LKSVHEQNLINTFEAIRQT-----NRTDLEGFYRAAKNLPEAVNNFFD 989 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 LV + E+R RL LL I++ I Sbjct: 990 NTLVMTPEEEIRTARLGLLCAIRSYSWKYAAWDYI 1024 >gi|195940758|ref|ZP_03086140.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. EC4024] Length = 395 Score = 345 bits (884), Expect = 2e-92, Method: Composition-based stats. Identities = 124/420 (29%), Positives = 203/420 (48%), Gaps = 41/420 (9%) Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+NI++ D + I+ GN +VV RL DA F+ D+ Sbjct: 1 GKLLPNFIFVANIESKD-PSQIISGNEKVVRPRLADAEFFFNTDR--------------- 44 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 K L+ + RL V+F ++GT ++ RI L IA+ I ADV RA + Sbjct: 45 -----KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIAELSGWIAREIGADVNHATRAGL 97 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 98 LSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACA 157 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 158 VAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLY 217 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 ++I F R + + D D I+A+L +K ++ F Sbjct: 218 GDKLTNAKVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMKAVSHFR 277 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + KR+ ILA K + ++ ++ L E L + ++ Sbjct: 278 TLEAASALAAANKRVSNILA---KSDETLNERVNAATLKEPEEISLAMQVVVLRDKLEPY 334 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 RY + L + + I+ FF++V+VNV+D+E+R NRLS+L+ ++ + L V ++ + Sbjct: 335 FAEGRYQEALVELAELRDVIDAFFEKVMVNVEDKELRINRLSMLEKLRELFLRVADISLL 394 >gi|218516038|ref|ZP_03512878.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli 8C-3] Length = 334 Score = 339 bits (869), Expect = 1e-90, Method: Composition-based stats. Identities = 166/332 (50%), Positives = 230/332 (69%) Query: 370 ARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVRE 429 A+LD LDV FHAK+GTQG RV+RIR L K++A + AD AL DRA VL+KADL TE V E Sbjct: 1 AKLDALDVTFHAKLGTQGARVARIRALAKELAAITGADPALTDRAAVLAKADLRTEAVGE 60 Query: 430 FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINF 489 FPELQG +G++YAVLQ EN S A+E+H KP+GP + VP +K++IT++LADKLDTL F Sbjct: 61 FPELQGLMGRKYAVLQGENASVAAAVEDHYKPQGPSDRVPEDKVAITLALADKLDTLTGF 120 Query: 490 WAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDR 549 WAI+EKP+GSKDP+ALRRA LG++RI+LE ++ +PL D +L+ FFHDRLK+YL D+ Sbjct: 121 WAIDEKPTGSKDPFALRRAALGVVRILLERRVRLPLLATTRDGDLLSFFHDRLKVYLRDQ 180 Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 R+DLI+A+L P+ D+LL + ++ L F +S G+ L KR Q+LA EEKK Sbjct: 181 GARYDLIDAVLTPDADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQLLAAEEKKGTV 240 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 I+ +SP L L+AEK L+A IS +++ + + + L + P++ FF++VL Sbjct: 241 IADGVSPALLKLDAEKELFAAISSASKDAADAVAGEDFRSAMEALSKLRGPVDRFFEEVL 300 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN +D +R NRL+LL+ I+ V + KI Sbjct: 301 VNDEDAAIRANRLALLRLIREATGTVADFSKI 332 >gi|254447347|ref|ZP_05060813.1| glycyl-tRNA synthetase beta subunit [gamma proteobacterium HTCC5015] gi|198262690|gb|EDY86969.1| glycyl-tRNA synthetase beta subunit [gamma proteobacterium HTCC5015] Length = 412 Score = 337 bits (863), Expect = 5e-90, Method: Composition-based stats. Identities = 105/398 (26%), Positives = 180/398 (45%), Gaps = 44/398 (11%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L+E+ +EE+P + + S +I L+ + + + P RL L LK + Sbjct: 4 MAKDLLIELGTEELPPKALKTLSNAFSASIIEQLETAQLKGEGSESFAAPRRLALLLKAV 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 +++ +R GP V G KA +GF RS G+ +I+ K + Sbjct: 64 PEEQGDQVIKRTGPAVQAAFDEDGNPTKAAEGFARSCGVSVDEVSRIQ--DGKVEKLYYE 121 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++KP + +L I+ A+ +P PK MRW + ++RP++ ++ + Sbjct: 122 VQKPGLSLSALLPEIIEKALTALPIPKRMRWGDND-----YQFVRPVQWLVTL-----HG 171 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 ++++ +++ T GHRFHAP P+++ D Y L V + RR I Sbjct: 172 DRVLPMEIMGQSASADTQGHRFHAPGPLRLTRADEYAAVLRERGKVEPSFDARRARIEEQ 231 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 H A A+G + V D LL+E+ LVEW G F++++L +P+E + T++ NQK F Sbjct: 232 VHAEAKALGGKAVIDPSLLDEVTALVEWPVAVAGHFEQRFLDVPQEALITTMEDNQKYFA 291 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI ++NI++ + + +GN RV+ R DA FW +D+ Sbjct: 292 VLDDNGQLMPHFITIANIESRNV-KLLREGNERVIRPRFADAEFFWNQDR---------- 340 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGER 389 L+ L +VF K+GT ++ Sbjct: 341 ----------KHRLEDNNDALK--KIVFQKKLGTVYDK 366 >gi|118488521|gb|ABK96073.1| unknown [Populus trichocarpa] Length = 512 Score = 334 bits (857), Expect = 3e-89, Method: Composition-based stats. Identities = 129/532 (24%), Positives = 253/532 (47%), Gaps = 47/532 (8%) Query: 185 CGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 CGN++YG R ++V+S + Y ++ A + ++ E R+ +IL ++ LA +V ++ Sbjct: 6 CGNLSYGLRNTPSATVQVESAESYEGVMQNAGINIEIEGRKRSILEQSNELAKSVKGRIL 65 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 + LL E++ LVE +G F + +L LPE+L+ + ++ +QK F G L FI Sbjct: 66 IQESLLNEVVNLVEAPVPVLGKFKESFLELPEDLLTMVMQKHQKYFAITDDSGRLLPFFI 125 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 V+N ++ + +GN V+ AR EDA F++ D K Sbjct: 126 AVANGAINET--VVKKGNEAVLRARYEDAKFFYEMDTR--------------------KK 163 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALVDRAIVLSKAD 421 + +LD ++FH K+GT +++ R+ + K+ + + +V A L+ +D Sbjct: 164 FSEFRNQLD--GILFHEKLGTMLDKMMRVENVITKLTVELGVNEDVIQVVQDAASLAMSD 221 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF L G + + YA+ + + +A+ E PR + VP I +++AD Sbjct: 222 LATAVVTEFTALSGIMARHYALREGYSAQIAEALLEITLPRFSGDMVPKTDAGIVLAIAD 281 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------------SQ 527 +LD+L+ +A +PS + DP+ LRR + G+++I+++N ++ L + Sbjct: 282 RLDSLVGLFAAGCQPSSANDPFGLRRISYGLVQILVDNDKNLDLVRALRLAADVQPIKAD 341 Query: 528 FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ LF RL+ +L D+ IR +++ ++L + + Sbjct: 342 VSMINDVHLFVTRRLEQFLVDKGIRPEIVRSVLAERASSPCLAAKTAYKMEALSRENLFP 401 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 K + + R +I+ K+ + +++ + E+ L++ + + I ++ + Sbjct: 402 KVVEAYSRPTRIVR---GKDVDTDMKVDEAAFETDEERALWSTFTSTKSKIYPGIEIDEF 458 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +I L P+E FF+ V V V+D +R NRL+LL I ++ + ++ Sbjct: 459 VEISSELLQ---PLEDFFNNVFVMVEDERIRKNRLALLNKIADLPRGIADLS 507 >gi|224137130|ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|222835348|gb|EEE73783.1| predicted protein [Populus trichocarpa] Length = 512 Score = 331 bits (850), Expect = 2e-88, Method: Composition-based stats. Identities = 127/532 (23%), Positives = 252/532 (47%), Gaps = 47/532 (8%) Query: 185 CGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 CGN++YG R ++V+S + Y ++ A + ++ E R+ +IL ++ LA +V ++ Sbjct: 6 CGNLSYGLRNTPSATVQVESAESYEGVMQNAGINIEIEGRKRSILEQSNELAKSVKGRIL 65 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 + LL E++ LVE +G F + +L LPE+L+ + ++ +QK F G L FI Sbjct: 66 IQESLLNEVVNLVEAPVPVLGKFKESFLELPEDLLTMVMQKHQKYFAITDDSGRLLPFFI 125 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 V+N ++ + +GN V+ AR EDA F++ D K Sbjct: 126 AVANGAINET--VVKKGNEAVLRARYEDAKFFYEMDTR--------------------KK 163 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALVDRAIVLSKAD 421 + +L+ ++FH K+GT +++ R+ + K+ + + +V A L+ +D Sbjct: 164 FSEFRNQLN--GILFHEKLGTMLDKMMRVENMITKLTVELGVNEDVIQVVQDAASLAMSD 221 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF L G + + YA+ + + +A+ E PR + VP I +++AD Sbjct: 222 LATAVVTEFTALSGIMARHYALREGYSAQIAEALLEITLPRFSGDMVPKTDAGIVLAIAD 281 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------------SQ 527 +LD+L+ +A +PS + DP+ LRR + +++I+++N ++ L + Sbjct: 282 RLDSLVGLFAAGCQPSSANDPFGLRRISYALVQILVDNDKNLDLVRALRLAADVQPIKAD 341 Query: 528 FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ LF RL+ +L D+ IR +++ ++L + + Sbjct: 342 VSMINDVHLFVTRRLEQFLVDKGIRPEIVRSVLAERASSPCLAAKTAYKMEALSRENLFP 401 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 K + + R +I+ K+ + +++ + E+ L++ + + I ++ + Sbjct: 402 KVVEAYSRPTRIVR---GKDVDTDMKVDEAAFETDEERALWSTFTSTKSKIYPGIEIDEF 458 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +I L P+E FF+ V V V+D +R NRL+LL I ++ + ++ Sbjct: 459 VEISSELLQ---PLEDFFNNVFVMVEDERIRKNRLALLNKIADLPRGIADLS 507 >gi|322515584|ref|ZP_08068564.1| glycyl-tRNA synthetase beta subunit [Actinobacillus ureae ATCC 25976] gi|322118340|gb|EFX90610.1| glycyl-tRNA synthetase beta subunit [Actinobacillus ureae ATCC 25976] Length = 367 Score = 328 bits (841), Expect = 2e-87, Method: Composition-based stats. Identities = 109/396 (27%), Positives = 186/396 (46%), Gaps = 43/396 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQSGLSFEKVEWFAAPRRLAVKMLGLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKEIEKRGPAVSAAFDADGNPTKAAEGWARGCGISVDQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF H + D Y+ L E V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEHEFTISHADEYLTALREKGMVVADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 EATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERV 390 L + L+ R+ RL+ V+F ++GT ++ Sbjct: 338 ------LKQRLEDRLPRLET--VLFQQQLGTLRDKT 365 >gi|116515026|ref|YP_802655.1| hypothetical protein BCc_085 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256880|gb|ABJ90562.1| glycyl-tRNA synthetase, b subunit [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 646 Score = 324 bits (831), Expect = 3e-86, Method: Composition-based stats. Identities = 179/716 (25%), Positives = 327/716 (45%), Gaps = 93/716 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +E++P++ A I +KE + Y+ + ++T +L L + L Sbjct: 6 LLIEIQTEDLPSKELKNIANFFYYIFKKKIKENKIQYKKISLFFTSKKLVLKVFSL---- 61 Query: 64 PEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 K KK + + + +K +++ Sbjct: 62 ------------------------------------KNIKKKKNHLIYIHKKKTISLKEK 85 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 +K IV I+K+P +SM W + + RP+++I+ +L +KII ++ I Sbjct: 86 IKKIVFETIKKIPLKRSMLWDE-----KSIRFSRPIRNIMILL-----NKKIIKAKIEGI 135 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 +I+YGH +P I + Y + ++ ++LD + R+ I+ L + Sbjct: 136 TSNSISYGHFLMSPKKIIFHHANQYTKKFFKKKKIILDYQERKKKIIKQIKNLTKKHNKK 195 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVLAN 301 + +K+LL+EI +EW +G F KKYL +P+E++ I+ NQK F ++ + N Sbjct: 196 IYINKNLLKEISVSIEWPIAHIGKFKKKYLNIPQEILIYIIENNQKYFSIFNTKKNTITN 255 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 FI +SNI+ + I+Q N +V++++L++ F K+D Sbjct: 256 YFIFISNIETPNFKK-IIQENEQVLSSKLKNINFFLKKDL-------------------- 294 Query: 362 SKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L + RLD+L ++ F K+G+ E+ RI+ + + I++++ + RA +LSK Sbjct: 295 ---LIKFSNRLDLLKNISFQKKLGSMYEKTIRIKKISQYISKILKVKKKSIKRAAILSKC 351 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T I+R LQG IG YA+ +E+ AI+EH P N+PT IS +S++ Sbjct: 352 DLTTNIIRS-TTLQGIIGMYYALYNHEDREIALAIKEHYLPNFSQSNLPTQLISCILSIS 410 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRAT----------LGIIRIILENKIDIPL----- 525 DK+DT+ ++I++ P +KDP+ALRR+T I II K I L Sbjct: 411 DKIDTITGIFSISKVPKNNKDPFALRRSTIGIIKIIIKKKIYIDIIKLIKYSINLYTHIK 470 Query: 526 SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 ++ + + ++ F + + + + +I ++L + ++LL I + I L F Sbjct: 471 NKILIQKLILNFIYSKFQSLYLKKKYNKKIISSVLSLKLNDLLDINNRIHALYNFQKINN 530 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 + L KRI IL +++K +I++ S ++ ++ + Sbjct: 531 MKNILNIYKRITNILKQKKEKKTKINIFYSNPIYKFSIYEKKIIILIKSIIENNIKKEKN 590 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + + +C PI+ FF +L+N + E R R+S+LQ IK I L + N + Sbjct: 591 DYFNLLKKIEELCTPIKEFFQNILINDKNTEKRLYRISILQEIKKIFLYITNFSYL 646 >gi|309803277|ref|ZP_07697374.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 11V1-d] gi|308164785|gb|EFO67035.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 11V1-d] Length = 473 Score = 320 bits (819), Expect = 6e-85, Method: Composition-based stats. Identities = 150/500 (30%), Positives = 244/500 (48%), Gaps = 57/500 (11%) Query: 128 VPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGN 187 + ++++ +P MRW ++RP+ I+ + +E II + + +I G Sbjct: 1 MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE-----IIPVKILDIVAGR 50 Query: 188 ITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDK 247 TYGHRF + + + D Y L+ V+ D R+N IL+ + L ++ D Sbjct: 51 KTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINSLCEKNNWQVKIDS 109 Query: 248 DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVS 307 LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F EG L N FI + Sbjct: 110 GLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDHEGTLINHFIAIR 169 Query: 308 NIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQ 367 N SD ++ GN +V+ ARL+DA F+ D+ PL Sbjct: 170 NG-NSDYLDNVIAGNEKVLVARLDDAQFFYDEDK--------------------KYPLSH 208 Query: 368 RMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDRAIVLSKADLCT 424 + +L V FH KIG+ E++ R++++G+ I + I+ ++A DRA + K DL T Sbjct: 209 FVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADFDRAADIYKFDLVT 266 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 +V EF ELQG +G YA L E + AI+E P ++P KI +S+ADKLD Sbjct: 267 NMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPITKIGSLLSIADKLD 326 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------------- 530 T+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 327 TIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDIIALLKGKTVAKL 386 Query: 531 ------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + F +R+K L + +D+I+ +L N+ I+ + L E + Sbjct: 387 PNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILSIADILQENHDDS 446 Query: 585 KGEKFLLSAKRIFQILAIEE 604 K +K + S RI IL + Sbjct: 447 KFKKVVESLTRIANILKKAD 466 >gi|254696832|ref|ZP_05158660.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|260761226|ref|ZP_05873569.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|260671658|gb|EEX58479.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 2 str. 86/8/59] Length = 290 Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats. Identities = 145/290 (50%), Positives = 188/290 (64%), Gaps = 1/290 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E + I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERCKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKC Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKC 290 >gi|309810216|ref|ZP_07704061.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 2503V10-D] gi|329920143|ref|ZP_08276974.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 1401G] gi|308169488|gb|EFO71536.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 2503V10-D] gi|328936597|gb|EGG33041.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 1401G] Length = 374 Score = 313 bits (802), Expect = 6e-83, Method: Composition-based stats. Identities = 116/409 (28%), Positives = 203/409 (49%), Gaps = 44/409 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNG-NSDYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 PL + +L V FH KIG+ E++ R++++G+ I + Sbjct: 335 -------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKK 374 >gi|329913694|ref|ZP_08275986.1| Glycyl-tRNA synthetase, beta subunit [Oxalobacteraceae bacterium IMCC9480] gi|327545289|gb|EGF30537.1| Glycyl-tRNA synthetase, beta subunit [Oxalobacteraceae bacterium IMCC9480] Length = 468 Score = 310 bits (795), Expect = 4e-82, Method: Composition-based stats. Identities = 133/486 (27%), Positives = 220/486 (45%), Gaps = 47/486 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + ++ L + +P RL + + + SP K ++ Sbjct: 15 PPKALARLGEAFANGVVAGLTARDFLDAGATATTFASPRRLAVTVTHVRSISPTKTMRDK 74 Query: 71 LGP------RVGAGKKAIDGFLRST-----GLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 + P G + L + G + K D + Sbjct: 75 VLPVSVALDAEGNPSAPLLKKLAAMALAIPGATPTLADLERAADGKADSFFYNYSAEGAS 134 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L++++ AI K+ PK M + S ++RP+ ++ + ++++ + Sbjct: 135 LRDGLQSVLEDAIAKLQIPKLMSYQRPDG--STVQFVRPVHKLIALF-----GDELLPVS 187 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASA 238 L + G +T GHRF + +++ D Y LE + V+ P R+ I A Sbjct: 188 LLGLQAGRVTLGHRFLSEGELRISDADSYASILELQGKVIASPAARKENIRAALLAAAGT 247 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 ++ + LL+E+ LVEW V+ F++++L +P+E + LT++TNQK F G Sbjct: 248 D--RVLMPEALLDEVSALVEWPVVYACHFEEEFLAVPQECLILTMQTNQKYFALTDDHGK 305 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L + F++VSNI D I+ GN RVV RL DA F+++D+ Sbjct: 306 LRSRFLIVSNIATED-PQHIIGGNERVVRPRLSDAKFFFEQDK----------------- 347 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 K L +R+ L +V+H K+GTQ +R +R+ L KIA DVAL +RA +L+ Sbjct: 348 ---KKTLAERLPGL--AGIVYHNKLGTQAQRTARVTALAGKIALASGNDVALAERAALLA 402 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T++V EFPELQG +G YA E AI EH +PR + +P + V+ Sbjct: 403 KTDLITDMVGEFPELQGIMGTYYAHHDGEPAEVAVAISEHYQPRFAGDALPASTTGTAVA 462 Query: 479 LADKLD 484 LADKL+ Sbjct: 463 LADKLE 468 >gi|254713029|ref|ZP_05174840.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M644/93/1] Length = 268 Score = 303 bits (777), Expect = 5e-80, Method: Composition-based stats. Identities = 134/268 (50%), Positives = 170/268 (63%), Gaps = 1/268 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSF 267 GLELVED LLEE+ GLVEW V MG F Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEF 268 >gi|256112922|ref|ZP_05453835.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] gi|265994362|ref|ZP_06106919.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] gi|262765475|gb|EEZ11264.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] Length = 269 Score = 300 bits (769), Expect = 5e-79, Method: Composition-based stats. Identities = 133/266 (50%), Positives = 169/266 (63%), Gaps = 1/266 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 4 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 63 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 64 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 123 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 124 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 183 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 184 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 243 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMG 265 GLELVED LLEE+ GLVEW V MG Sbjct: 244 GLELVEDDGLLEEVSGLVEWPVVLMG 269 >gi|46206198|ref|ZP_00047591.2| COG0751: Glycyl-tRNA synthetase, beta subunit [Magnetospirillum magnetotacticum MS-1] Length = 352 Score = 297 bits (761), Expect = 3e-78, Method: Composition-based stats. Identities = 122/275 (44%), Positives = 169/275 (61%), Gaps = 4/275 (1%) Query: 11 EEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEER 70 EEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL EER Sbjct: 2 EEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLPARGEAVREER 61 Query: 71 LGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPV 130 GPRVGA + A+ GFL+S GL +++ DPKKG+ YLAV+ +P R DVL I+P Sbjct: 62 RGPRVGAPEAAVQGFLKSAGLDSLAQATTVTDPKKGEFYLAVIERPGRETLDVLAEIIPG 121 Query: 131 AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITY 190 I+ PWPKSMRW + A W+RPL+SI+ E +++ ++ I G T Sbjct: 122 IIRSFPWPKSMRWGAASAQPGALRWVRPLQSIVATFGPETETPEVVPFSVEGISAGTTTR 181 Query: 191 GHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 GHRF AP P +V+ D Y++ LE A V+LD + R++ IL+DA LA A GL+LVED+ LL Sbjct: 182 GHRFLAPEPFEVRRFDDYVQALERADVILDADRRKDIILHDAXDLAFARGLDLVEDEGLL 241 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCL----PEELIRL 281 EE+ GLVE V MGSF++++L + P E+ Sbjct: 242 EEVGGLVERPVVLMGSFEERFLEIRARQPGEIRAT 276 >gi|289805923|ref|ZP_06536552.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 336 Score = 296 bits (757), Expect = 1e-77, Method: Composition-based stats. Identities = 92/336 (27%), Positives = 149/336 (44%), Gaps = 21/336 (6%) Query: 16 RMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV 75 + AE + L G+ + ++ + P RL L + L+ P++ E+ GP + Sbjct: 10 KTLRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDREIEKRGPAI 69 Query: 76 -------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIV 128 G KA +G+ R G+ ++ KG+ L E +L +V Sbjct: 70 AQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLYRAYVKGESTEALLPNMV 127 Query: 129 PVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNI 188 ++ K+P PK MRW + ++RP+ ++ +L +K+I + I + Sbjct: 128 ATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL-----GDKVIPATILGIQSDRV 177 Query: 189 TYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELVEDK 247 GHRF + + D Y L V+ D E R+ I DA A +G + Sbjct: 178 IRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSE 237 Query: 248 DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVS 307 LLEE+ LVEW V F++K+L +P E + T+K +QK F +G L FI V+ Sbjct: 238 SLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYANDGKLLPNFIFVA 297 Query: 308 NIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 298 NIESKD-PQQIISGNEKVVRPRLADAEFFFNTDRKK 332 >gi|99036057|ref|ZP_01315093.1| hypothetical protein Wendoof_01000063 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 494 Score = 290 bits (742), Expect = 6e-76, Method: Composition-based stats. Identities = 154/510 (30%), Positives = 250/510 (49%), Gaps = 58/510 (11%) Query: 222 ECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKK-YLCLPEELIR 280 + R+ IL+ ++ L+L ++ LL E+ GL+EW V G +++ LP+E+I Sbjct: 2 DKRKQFILDQINKFTKEQNLQLEKNDYLLNELTGLIEWPIVLFGEVNQEKSFGLPKEVIL 61 Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 + QK G + F + +V+G+ R++ ARL DA +D Sbjct: 62 SIVNIQQKYLAL--SNGKRISHF----VTVVNVNNGEVVKGHERILEARLADAQFLISQD 115 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + + LD + +L ++FHA +G+ GE+V RI L K I Sbjct: 116 K--------------------KENLDYYVKKLG--SILFHASLGSVGEKVKRITALSKYI 153 Query: 401 AQLI-DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 A I A + V+RA L+KADL T IVREFPELQG +G YA E+ +AI EH Sbjct: 154 AIFIPHASLIKVERAAYLAKADLATSIVREFPELQGVMGGYYASYFQEDKEVVEAITEHY 213 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 KP GP + P + +I VS+ADK+D+L+ A EK SGS D + LRR T+GIIR ILEN Sbjct: 214 KPIGPEQECPKSPSAIAVSIADKVDSLVGLIAAGEKISGSYDQFGLRRMTIGIIRTILEN 273 Query: 520 KIDIPLSQFIED--------------------------QNLILFFHDRLKLYLHDRDIRH 553 + +P+ I+ + + F +R K+ L +RDIR Sbjct: 274 NLHVPIRLMIDKSVSLYSRLLFNKNTASVDKPNRKQISELVFRFCLERFKVILKNRDIRQ 333 Query: 554 DLIEAIL-RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EIS 611 D++++IL + + ++LLT L+ + S+ +GE+ L + KR+ +++ K + S Sbjct: 334 DVVDSILYKIDINDLLTAEKRTVILDRYLSTPEGEQILSTYKRVSNMMSKARKSDGTTYS 393 Query: 612 LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVN 671 ++L+ E L +I++++ + ++ D L I F D + +N Sbjct: 394 ASYGKRFLIESEEIALSNCAITACKNIKQAIKNNHFNVALDELAGFAPFINQFMDSIKIN 453 Query: 672 VDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D ++R NRLSLL+ + +I +V + I Sbjct: 454 CDSDKLRRNRLSLLENVVSIFHLVADFNLI 483 >gi|3122890|sp|O30836|SYGB_HAEAE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|2394404|gb|AAB70306.1| glycyl-tRNA-synthetase [Haemophilus influenzae biotype aegyptius] Length = 285 Score = 289 bits (740), Expect = 9e-76, Method: Composition-based stats. Identities = 81/286 (28%), Positives = 139/286 (48%), Gaps = 19/286 (6%) Query: 429 EFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLIN 488 EF + QG +G YA E+ A+ E PR + +P + ++ V+LADK DTL Sbjct: 1 EFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVASAVALADKFDTLTG 60 Query: 489 FWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------------N 533 + I + P GS DP+ALRRA LG +RII+E + + L ++ + Sbjct: 61 IFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAALFGDKLANQNVVAD 120 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSA 593 ++ F R + + D I D+I+A+L ++ ++ F + E + Sbjct: 121 VVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSHFRTLDSAEALAAAN 180 Query: 594 KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 KR+ ILA + EI+L + + +AEK L + T +Q ++ Y + D Sbjct: 181 KRVSNILAKADAAIGEINLTV----CVEQAEKALAEAVLALRTEVQPLIEQGDYTTVLDK 236 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 237 LANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 282 >gi|254282312|ref|ZP_04957280.1| glycyl-tRNA synthetase beta subunit [gamma proteobacterium NOR51-B] gi|219678515|gb|EED34864.1| glycyl-tRNA synthetase beta subunit [gamma proteobacterium NOR51-B] Length = 341 Score = 285 bits (730), Expect = 2e-74, Method: Composition-based stats. Identities = 103/350 (29%), Positives = 167/350 (47%), Gaps = 22/350 (6%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 L E+ +EE+PA Q +E L LI L G+ +++ R + TP RL + + GL Sbjct: 5 TLLFELGTEELPATAQGAMSESLHNHLIAALNSCGLDFEDSRFFATPRRLAVQIDGLLLE 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +P+ E LGP + G A +GF R G+ D KG+ + + Sbjct: 65 APDVEREVLGPPIAASRDADGNWTPAAEGFARKQGVPL--DLLEAVATPKGERLGLKVTE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 L +V+ +V A+ +P K MRW ++RP++ + + + Sbjct: 123 AGVLAREVVPNLVAEAVAAIPVAKYMRWGRKRC-----EFLRPVQW-----LVLLLDDTV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L L E+ + GHRFH P+ + + Y + L +A V+ D + RRN + N + Sbjct: 173 LPLSLFELEADRTSRGHRFHHPNNVAINHAKDYEKLLFQAKVIADFDTRRNVVANQVETV 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A V +DLL+E+ GLVEW G+FD+ +L +P+E + ++KT+QK F Sbjct: 233 AEV--GTPVIAEDLLDEVTGLVEWPIALAGTFDEAFLQVPQEALISSMKTHQKYFHLVDD 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 G L FI V+NI++ D A ++ GN +V+ RL DA + RD+ Sbjct: 291 SGALLPRFITVANIESKD-PAKVIAGNEKVIRPRLSDAAFLFDRDKKTPL 339 >gi|58698040|ref|ZP_00372964.1| glycyl-tRNA synthetase, beta subunit, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|58535397|gb|EAL59472.1| glycyl-tRNA synthetase, beta subunit, putative [Wolbachia endosymbiont of Drosophila ananassae] Length = 462 Score = 273 bits (698), Expect = 7e-71, Method: Composition-based stats. Identities = 149/479 (31%), Positives = 233/479 (48%), Gaps = 58/479 (12%) Query: 253 IIGLVEWVQVFMGSFDKK-YLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 + GL+EW V G +++ LP+E+I + T QK G + F Sbjct: 1 MTGLIEWPIVLFGEVNQEKSFGLPKEVILSIVNTQQKYLAL--SNGKRISHF----VTVV 54 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 + +V+G+ R++ ARL DA +D+ + LD + + Sbjct: 55 NVNNGEVVKGHERILEARLADAQFLISQDK--------------------KENLDYYVKK 94 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVLSKADLCTEIVREF 430 L ++FHA +G+ GE+V RI L K IA I A + V+RA L+KADL T IVREF Sbjct: 95 LG--SILFHASLGSVGEKVKRITALSKYIAIFIPHASLIKVERAAYLAKADLATSIVREF 152 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +G YA E+ +AI EH KP GP + P + +I VS+ADK+D+L+ Sbjct: 153 PELQGVMGGYYASYFQEDREIVEAITEHYKPIGPEQECPKSPSAIAVSIADKVDSLVGLI 212 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------------------- 531 A EK SGS D + LRR T+GIIR ILEN + IP+ I+ Sbjct: 213 AAGEKISGSYDQFGLRRMTIGIIRTILENNLHIPIRLMIDKSVSLYSRLLFNKNTTSVDK 272 Query: 532 -------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTIVDLIKHLNEFFSS 583 + + F +R K+ L +RDIR D++++IL + ++LLT L+ + S Sbjct: 273 PNRKQISELVFRFCLERFKVILKNRDIRQDIVDSILYKIGINDLLTAEKQTVILDRYLSM 332 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNRE-ISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 +GE+ L + KR+ +++ K + S ++L+ E L +I++++ Sbjct: 333 PEGEQILSTYKRVSNMMSKVRKSDGTTYSASYGKRFLIENEEIALSNCAITACKNIKQAI 392 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ D L I F D V +N D ++R NRLSLL+ + +I +V + I Sbjct: 393 KNNHFNAALDELAGFAPFINQFMDSVKINCDSDKLRRNRLSLLENVVSIFHLVADFNLI 451 >gi|207091685|ref|ZP_03239472.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori HPKX_438_AG0C1] Length = 456 Score = 272 bits (696), Expect = 1e-70, Method: Composition-based stats. Identities = 128/480 (26%), Positives = 220/480 (45%), Gaps = 50/480 (10%) Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV----- 298 D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F ++ Sbjct: 3 EIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYFAVFDQKSQEENPT 62 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D + + L+ Sbjct: 63 LHNGFIVVSNAISKD-KQKIIAGNQKVLKARLSDAVFFYENDLKKPLDNAPLESVVFVQG 121 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 L L +M R ++ K + ++ + LV RA+ ++ Sbjct: 122 LG---TLKDKMERESIIAQYLTQKYISSLN-------------MPLEKALELVKRAVKIA 165 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EF ELQG +G YA+ QNEN +++E P +P++ S V+ Sbjct: 166 KADLLSEVVYEFSELQGIMGYYYALKQNENELVALSLKEQYLPASENAPLPSSVFSAIVA 225 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQFIEDQN---- 533 L+ KLD+L + ++ + PSGSKDP+ALRR + G+++I+ ++ L + Sbjct: 226 LSLKLDSLFSLFSTGKIPSGSKDPFALRRLSFGLLKIVAHYGLEFDLKADLKNLFEKVGV 285 Query: 534 --------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 L F +R + D +I ++L +++ I+ +K L F K Sbjct: 286 YQSFDLEVLEKFLLERFHNLI---DCNPSIIRSVLNTNERDIVKIIQKVKALKRFLDDPK 342 Query: 586 GEK----FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + KR+ I + +N S S E L+ + T ES Sbjct: 343 NAQKKELLFSAFKRLANI---NKDRNPNESSGFSTSLFKESQEHALFEAFNAIKTSAFES 399 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D K + + P+E +F VLV D E++ NR + L + L + ++++I Sbjct: 400 LDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQSFLEIGDIKEI 454 >gi|163784109|ref|ZP_02179056.1| glycyl-tRNA synthetase subunit beta [Hydrogenivirga sp. 128-5-R1-1] gi|159880624|gb|EDP74181.1| glycyl-tRNA synthetase subunit beta [Hydrogenivirga sp. 128-5-R1-1] Length = 342 Score = 269 bits (687), Expect = 1e-69, Method: Composition-based stats. Identities = 101/346 (29%), Positives = 169/346 (48%), Gaps = 36/346 (10%) Query: 386 QGERVSRIRVLGKKIAQLIDAD-VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVL 444 ++V R + IA I + + ++RA LSK DL TE+V+EF ELQG +G YA+ Sbjct: 1 MLDKVKRNGNIATLIAGEIGFNNINDLERANTLSKCDLLTEMVKEFDELQGIMGMHYALK 60 Query: 445 QNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYA 504 Q E AI EH P+ + +P I ++L+DKLDT+I+F +I EKP G+ DP+A Sbjct: 61 QGEKEEVAKAIYEHYLPKTADDELPQTDIGSILALSDKLDTVISFLSIGEKPKGASDPFA 120 Query: 505 LRRATLGIIRIILENKIDIPLSQFIED-----------------------------QNLI 535 +RRA +GI+RI++E IDI L + +++ ++ Sbjct: 121 VRRAAIGIVRILVEKGIDIDLKKLLKEIEKNAKKSEILAFAKINSNWETPFDENVIPEVL 180 Query: 536 LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKR 595 F R Y+ D+ D+I A++ ++ +L + IK + +F S + KR Sbjct: 181 EFIKGRFISYMKDKGYSTDIINAVVSTDDYSLYNLYLKIKTIQQFKKSEDFNDVMTVFKR 240 Query: 596 IFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 + +I+ + + L + EK+LY + + + +K Y + + L Sbjct: 241 VGKIIP------EKFESSFNQTLLGKDEEKQLYKQYLTTKENFENDIKNKDYKKALESLL 294 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + I+ FFD V+V V D +++NRLSLL+ I + + + KI Sbjct: 295 KLKPYIDEFFDNVMVMVKDENIKNNRLSLLKMINDTFKKIADFTKI 340 >gi|23008660|ref|ZP_00050015.1| COG0751: Glycyl-tRNA synthetase, beta subunit [Magnetospirillum magnetotacticum MS-1] Length = 306 Score = 265 bits (677), Expect = 2e-68, Method: Composition-based stats. Identities = 157/325 (48%), Positives = 205/325 (63%), Gaps = 34/325 (10%) Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 +SN+ ASDGGAAI GN RVV ARL DA FW+ D+ + L Sbjct: 1 MSNLVASDGGAAITAGNERVVRARLSDAKFFWETDK--------------------ATKL 40 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTE 425 + R+ +LD +VFH K+GTQGERV+RI L K+IA L+ AD L +RA L+KADL TE Sbjct: 41 EDRLPKLD--SIVFHEKLGTQGERVARIAGLAKEIAPLVGADPVLAERAARLAKADLVTE 98 Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EFPELQG +G++YA LQ E+ S AIEEH KP GP + VPT+ +SI V+LADKLDT Sbjct: 99 MVGEFPELQGLMGRKYAALQGEHPSVAAAIEEHYKPVGPSDRVPTDPVSIAVALADKLDT 158 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----------NLI 535 L+ FWAI+EKP+GSKDP+ALRRA LG+IR ++E + + L+ +E + +L+ Sbjct: 159 LVGFWAIDEKPTGSKDPFALRRAALGVIRAVIERSLRLSLASLVEGRFTGTSAERTADLL 218 Query: 536 LFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 FF DRLK+YL D+ RHDLI+A+ P D+LL +V ++ L EF S G+ L K Sbjct: 219 AFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLLVVRRVEALGEFLGSDDGKNLLAGYK 278 Query: 595 RIFQILAIEEKKN-REISLEISPQY 618 R IL IEEKK+ R E Sbjct: 279 RAANILRIEEKKDGRAYDAEPDAVL 303 >gi|254447445|ref|ZP_05060911.1| glycyl-tRNA synthetase [gamma proteobacterium HTCC5015] gi|198262788|gb|EDY87067.1| glycyl-tRNA synthetase [gamma proteobacterium HTCC5015] Length = 290 Score = 264 bits (675), Expect = 4e-68, Method: Composition-based stats. Identities = 75/291 (25%), Positives = 126/291 (43%), Gaps = 18/291 (6%) Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EF +QG G+ YA E A+EE +P+ + +P + ++LAD+LDT Sbjct: 1 MVLEFDSMQGIAGRYYAEHDGEPGDVAAALEEQYRPKFAGDQLPQSDSGRALALADRLDT 60 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILE---------------NKIDIPLSQFIE 530 L+ W ++P+GSKDP+ALRRA LG++RI+ E L Sbjct: 61 LVGIWTAGKQPTGSKDPFALRRAALGVLRILGETPLDLDLDALLDATIAGYPPELDAASN 120 Query: 531 DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 L+ FF +R K+ DR EA ++ + + F + Sbjct: 121 KAALLDFFRERFKVLCLDRGYSRLQFEAAASVGYSRPADLLKRLHAVQLFSELDASDSLS 180 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + KRI I K + + + E EK L+ + Q ++ Y Sbjct: 181 AADKRIRNIFK---KIDANVLNNVDASLFEDELEKNLHQTLIKLQESSQLCIERSDYETA 237 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + P++ FFD V+V +D +R NRL+LL ++ + L + ++ ++ Sbjct: 238 LKTLAELKAPVDAFFDGVMVMAEDEALRQNRLALLAQLRGLFLQIADLSQL 288 >gi|218509788|ref|ZP_03507666.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli Brasil 5] Length = 257 Score = 264 bits (674), Expect = 5e-68, Method: Composition-based stats. Identities = 104/216 (48%), Positives = 137/216 (63%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPK+MRW S A W+RPL+SI+C E + I ++ Sbjct: 121 EEIVAEVMPGIIRDFPWPKAMRWGKASSKSGALRWVRPLQSIVCTFGPEHEETTFIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM 216 I NITYGHRFHAP I V+ D Y LE+A Sbjct: 181 DGIIASNITYGHRFHAPEAITVRRFDDYAASLEKAK 216 >gi|218507883|ref|ZP_03505761.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli Brasil 5] Length = 244 Score = 261 bits (668), Expect = 2e-67, Method: Composition-based stats. Identities = 107/242 (44%), Positives = 160/242 (66%) Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 KP+GP + VP +K++IT++LADKLDTL FWAI+EKP+GSKDP+ALRRA LG++RI+LE Sbjct: 1 KPQGPSDRVPEDKVAITLALADKLDTLTGFWAIDEKPTGSKDPFALRRAALGVVRILLER 60 Query: 520 KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ +PL D +L+ FFHDRLK+YL D+ R+DLI+A+L P+ D+LL + ++ L Sbjct: 61 RVRLPLLATTRDGDLLSFFHDRLKVYLRDQGARYDLIDAVLTPDADDLLMVARRVEALTA 120 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F +S G+ L KR Q+LA EEKK I+ +SP L L+AEK L++ IS Sbjct: 121 FITSEDGKNLLAGTKRATQLLAAEEKKGTVIADGVSPALLKLDAEKELFSAISSASKDAA 180 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +++ + + + L + ++ FF++VLVN +D +R NRL+LL+ I+ V + Sbjct: 181 DAVAGEDFRSAMEALSKLRGAVDRFFEEVLVNDEDAAIRANRLALLRLIREATGTVADFS 240 Query: 700 KI 701 KI Sbjct: 241 KI 242 >gi|167044837|gb|ABZ09504.1| putative glycyl-tRNA synthetase beta subunit [uncultured marine crenarchaeote HF4000_APKG8D22] Length = 360 Score = 260 bits (665), Expect = 5e-67, Method: Composition-based stats. Identities = 126/381 (33%), Positives = 183/381 (48%), Gaps = 43/381 (11%) Query: 206 DHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMG 265 Y+ +L+DPE R+ IL LA G + ED +LL + LVE+ G Sbjct: 5 ASYLEKSANHFLLVDPEVRKQKILEQVQILAQEAGGFVEEDPELLNIVNYLVEFPVAIRG 64 Query: 266 SFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRV 325 FD ++L LP+EL+ +T+K +QK F +G L FI +SN+ A G I GN RV Sbjct: 65 DFDPRFLELPKELLVMTMKHHQKYFPVSDGKGNLLPGFITISNMSA---GHEIKNGNERV 121 Query: 326 VAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGT 385 + ARLEDA F+ D+ K LD + L VVF K+GT Sbjct: 122 LRARLEDARFFYNEDK--------------------KKNLDDFVESLK--GVVFQKKLGT 159 Query: 386 QGERVSRIRVLGKKIAQLIDADV-ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVL 444 E++ RI L + ++ D RA L KADL T +V EFPELQG +G YA Sbjct: 160 LYEKMERICDLARILSTHACPDKEPQALRAGRLCKADLVTLMVYEFPELQGIMGGYYATH 219 Query: 445 QNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYA 504 E + AI+EH +P ++ P +++ +++ADKLDT++ + PSGS+DPY Sbjct: 220 SGEEPTVAQAIQEHYRPAFAGDDPPASELGAVIAVADKLDTILGCIGVGLIPSGSEDPYG 279 Query: 505 LRRATLGIIRIILENKIDIPLSQFIE-----------------DQNLILFFHDRLKLYLH 547 LRR LGII+I L + L +E +++ F R K YL Sbjct: 280 LRRNALGIIQIFLHRGWQVSLDNLVEEGLRSMGSKIKLDPETIKNHVMELFSQRYKTYLD 339 Query: 548 DRDIRHDLIEAILRPENDNLL 568 +D I+ +L D+++ Sbjct: 340 AEGFPYDAIDCVLSTGLDSIV 360 >gi|213416947|ref|ZP_03350091.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 279 Score = 259 bits (662), Expect = 1e-66, Method: Composition-based stats. Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 18/281 (6%) Query: 436 KIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEK 495 +G YA E A+ E +PR +++P+N ++ +++ADK+DTL + I + Sbjct: 1 VMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQH 60 Query: 496 PSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---------------QNLILFFHD 540 P G KDP+ALRRA LG++RII+E +++ L E+ ++I F Sbjct: 61 PKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNASVVDDVIDFMLG 120 Query: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 R + + D D I+A+L +K ++ F + + + KR+ IL Sbjct: 121 RFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMKAVSHFRTLEEASALAAANKRVSNIL 180 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 A K ++ + L AE L + +Q RY + L ++ P Sbjct: 181 A---KATEPLNDIVHASVLKEAAEIELARHLVVLRDKLQPYFADGRYQEALIELAALRAP 237 Query: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ FF+ V+VN +++++R NRL+LL ++ + L V ++ + Sbjct: 238 VDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVADISLL 278 >gi|289804684|ref|ZP_06535313.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 278 Score = 259 bits (662), Expect = 1e-66, Method: Composition-based stats. Identities = 73/280 (26%), Positives = 133/280 (47%), Gaps = 18/280 (6%) Query: 437 IGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKP 496 +G YA E A+ E +PR +++P+N ++ +++ADK+DTL + I + P Sbjct: 1 MGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHP 60 Query: 497 SGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---------------QNLILFFHDR 541 G KDP+ALRRA LG++RII+E +++ L E+ ++I F R Sbjct: 61 KGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNASVVDDVIDFMLGR 120 Query: 542 LKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 + + D D I+A+L +K ++ F + + + KR+ ILA Sbjct: 121 FRAWYQDEGYSVDTIQAVLARRPTRPADFDARMKAVSHFRTLEEASALAAANKRVSNILA 180 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 K ++ + L AE L + +Q RY + L ++ P+ Sbjct: 181 ---KATEPLNDIVHASVLKEAAEIELARHLVVLRDKLQPYFADGRYQEALIELAALRAPV 237 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + FF+ V+VN +++++R NRL+LL ++ + L V ++ + Sbjct: 238 DEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVADISLL 277 >gi|255029589|ref|ZP_05301540.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes LO28] Length = 368 Score = 258 bits (660), Expect = 2e-66, Method: Composition-based stats. Identities = 110/396 (27%), Positives = 184/396 (46%), Gaps = 53/396 (13%) Query: 328 ARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQG 387 ARL DA F++ D L +D+ +A+L ++VFH K+GT Sbjct: 1 ARLSDADFFYQED--------------------LKMTIDEAVAKLQ--NIVFHEKLGTLT 38 Query: 388 ERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVL 444 E++ R++ + +A +D D + R + K DL T IV EFPELQG +G++YA+L Sbjct: 39 EKMKRVQKVALMLADYLDWQEEDKQDIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALL 98 Query: 445 QNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYA 504 Q E + AI EH P +P + +++ADKL+TLI F+ +N P+GS DP+ Sbjct: 99 QGEKPAIATAIREHYLPNSAEGELPQTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFG 158 Query: 505 LRRATLGIIRIILENKIDIP-------------------LSQFIEDQNLILFFHDRLKLY 545 LRR+ G +RII N +IP L + + F +RL++ Sbjct: 159 LRRSAFGAMRIIQANGWNIPMLEVISRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVI 218 Query: 546 LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK 605 L IRHD+I+A++ + + + ++D + LNE + + + R+ +I E Sbjct: 219 LQGHHIRHDIIDAVIGGDPNVIPQLIDRAQILNEHAEAEWFRPTIEALSRVVKIAKKYED 278 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 +E+ P E E+ L+ + +R + I+ +F Sbjct: 279 G-----VEVDPALFENEYEQALFDKLEKLKFDYAGLTIIER----LKAFADLRTTIDAYF 329 Query: 666 DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D LV D+ E+++NRL+LL + + I + +I Sbjct: 330 DNTLVMSDNDELKNNRLALLFELASFIKEFAQMDEI 365 >gi|255030754|ref|ZP_05302705.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes LO28] Length = 279 Score = 254 bits (648), Expect = 4e-65, Method: Composition-based stats. Identities = 74/292 (25%), Positives = 129/292 (44%), Gaps = 21/292 (7%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV- 75 + L + L E + + ++ Y TP RL + ++G++ ++EE GP Sbjct: 2 YVTSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEGMAEEQANRVEEAKGPAKK 61 Query: 76 ------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVP 129 G KA GF +S + +D K + +L + + Sbjct: 62 IALDEEGNWSKAALGFAKSQKVDPAD--LTFRDIKGVEYIYIKKEVIGEKTSTLLPS-LE 118 Query: 130 VAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNIT 189 + + +P SM W + +IRP+K ++ + E+II ++ + N + Sbjct: 119 KVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----DEEIIPFEITGVTTSNTS 168 Query: 190 YGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDL 249 GHRF ++ Y L E V+++ E R+ AI+ L S ++ ED DL Sbjct: 169 RGHRFLG-KSATIKQPSDYPNALLEQFVVVNAEERKQAIVEQLRELESMENWQIKEDDDL 227 Query: 250 LEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 LEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F ++ G L Sbjct: 228 LEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFPVFSQAGELLP 279 >gi|213423815|ref|ZP_03356795.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 297 Score = 244 bits (623), Expect = 4e-62, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 34/329 (10%) Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 E +L +V ++ K+P PK MRW + ++RP+ ++ +L +K+ Sbjct: 2 KGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL-----GDKV 51 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + + D Y L V+ D E R+ I DA Sbjct: 52 IPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEE 111 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 112 AARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYA 171 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 172 NDGKLLPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFFFNTDR------------- 217 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 218 -------KKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRA 268 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAV 443 +LSK DL T +V EF + QG +G YA Sbjct: 269 GLLSKCDLMTNMVFEFTDTQGVMGMHYAR 297 >gi|213027175|ref|ZP_03341622.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 292 Score = 242 bits (617), Expect = 2e-61, Method: Composition-based stats. Identities = 102/325 (31%), Positives = 150/325 (46%), Gaps = 34/325 (10%) Query: 138 PKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP 197 PK MRW + ++RP+ ++ +L +K+I + I + GHRF Sbjct: 1 PKLMRWGASD-----VHFVRPVHTVTLLL-----GDKVIPATILGIQSDRVIRGHRFMGE 50 Query: 198 HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGL 256 + + D Y L V+ D E R+ I DA A +G + LLEE+ L Sbjct: 51 PEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSESLLEEVASL 110 Query: 257 VEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGA 316 VEW V F++K+L +P E + T+K +QK F +G L FI V+NI++ D Sbjct: 111 VEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKD-PQ 169 Query: 317 AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLD 376 I+ GN +VV RL DA F+ D+ K L+ + RL Sbjct: 170 QIISGNEKVVRPRLADAEFFFNTDR--------------------KKRLEDNLPRLQT-- 207 Query: 377 VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGK 436 V+F ++GT ++ RI+ L IA+ I ADV RA +LSK DL T +V EF + QG Sbjct: 208 VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGV 267 Query: 437 IGKEYAVLQNENISCCDAIEEHLKP 461 +G YA E A+ E +P Sbjct: 268 MGMHYARHDGEAEDVAVALNEQYQP 292 >gi|320540662|ref|ZP_08040303.1| putative glycine tRNA synthetase, beta subunit [Serratia symbiotica str. Tucson] gi|320029275|gb|EFW11313.1| putative glycine tRNA synthetase, beta subunit [Serratia symbiotica str. Tucson] Length = 263 Score = 241 bits (616), Expect = 2e-61, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 18/265 (6%) Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 QG +G YA E A+ E +PR + +P ++++ ++++ADK+DTL + I Sbjct: 1 TQGVMGMHYARHDGEVEDVAVALNEQYQPRFAGDRLPQSRVACSLAIADKMDTLAGIFGI 60 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---------------QNLILF 537 + P G KDP+ALRRA LG++RII+E + + L E+ ++ F Sbjct: 61 GQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQILTEEAMHLYSSKLTNVKVVDEVVEF 120 Query: 538 FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 R + + + D I+A+L +K ++ F + + + KR+ Sbjct: 121 MLGRFRAWYQEEGHALDTIQAVLARRPTKPADFDARVKAVSHFRTLEEAAALAAANKRVS 180 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 ILA K ++ + L AE +L + + ++ Y L ++ Sbjct: 181 NILA---KSTDTLNNHVQASVLQEAAEIQLASHLVVLRDKLEPYFAAGNYQDALVELATL 237 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRL 682 EP++ FF+ V+V +D VR NRL Sbjct: 238 REPVDAFFENVMVMAEDDAVRVNRL 262 >gi|217032650|ref|ZP_03438137.1| hypothetical protein HPB128_19g11 [Helicobacter pylori B128] gi|216945660|gb|EEC24288.1| hypothetical protein HPB128_19g11 [Helicobacter pylori B128] Length = 408 Score = 229 bits (583), Expect = 2e-57, Method: Composition-based stats. Identities = 111/420 (26%), Positives = 186/420 (44%), Gaps = 45/420 (10%) Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + + L+ Sbjct: 15 LHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYENDLKKPLDNAPLERVVFVQG 73 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 L L +M R + K + ++ + LV RA+ ++ Sbjct: 74 LG---TLKDKMERESTIAQCLTQKYISSLN-------------MPLEKALELVKRAVKIA 117 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EF ELQG +G YA+ QNEN +++E P +P++ S V+ Sbjct: 118 KADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPLPSSVFSAIVA 177 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQFIEDQN---- 533 L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II ++ L + Sbjct: 178 LSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKADLKSLFEKVGV 237 Query: 534 --------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA- 584 L F +R + D +I ++L +++ I+ +K L F Sbjct: 238 YQSFDLEVLEKFLLERFHNLI---DCNPSIIRSVLNTNERDIVKIIQKVKALKRFLDDPK 294 Query: 585 ---KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 K E + KR+ I + +N S S E L+ + T E Sbjct: 295 NARKKELLFSAFKRLANI---NKDRNPNESSGFSISLFKEPEEHALFEAFNAIKTSAFEG 351 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D K + S+ P+E +F VLV D E++ NR + L + L + ++++I Sbjct: 352 LDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQSFLEIGDIKEI 406 >gi|291533031|emb|CBL06144.1| Glycyl-tRNA synthetase, beta subunit [Megamonas hypermegale ART12/1] Length = 291 Score = 227 bits (580), Expect = 3e-57, Method: Composition-based stats. Identities = 84/285 (29%), Positives = 138/285 (48%), Gaps = 24/285 (8%) Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EF ELQG +G+EYA+L E AI EH PR + P + VSLADK+D Sbjct: 1 MVCEFTELQGIMGREYALLDGEGQEVATAIYEHYMPRFAGDAEPASVAGRLVSLADKMDN 60 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------- 530 ++ ++ P+GS+DP+ALRR LGI+ I+E I +S+ + Sbjct: 61 IVATFSRGLVPTGSQDPFALRRQALGIVHTIIEANYTISISEIADKAMDLLNITDSEKRA 120 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +N+ FF RLK L D D+R+D+I+A+L D + + +S Sbjct: 121 EIQKNVAEFFTLRLKNVLGDNDVRYDIIDAVLE-NADEVAGTYAKACVTAQEIASGVLND 179 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + R+ I E + I+ L+ EK LY ++ ++++K Y Sbjct: 180 AIQAFVRVGNISKKAE------NNVINEALFTLDEEKALYNTYVAVAKDVETALNNKDYK 233 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 D + + PI FFD V+V D ++++NRL+LL+ + +++ Sbjct: 234 TAIDKMQELTAPINNFFDNVMVMDKDEQIKNNRLALLKILIHLLN 278 >gi|2500994|sp|P77891|SYGB_MORCA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|1657861|gb|AAB18210.1| glycyl-tRNA synthetase beta subunit [Moraxella catarrhalis] Length = 266 Score = 226 bits (576), Expect = 1e-56, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 22/277 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V G +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ I+ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWIVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGS 266 LA V + ++LL+E+ LV+ S Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRAS 266 >gi|218458475|ref|ZP_03498566.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli Kim 5] Length = 175 Score = 226 bits (576), Expect = 1e-56, Method: Composition-based stats. Identities = 85/172 (49%), Positives = 113/172 (65%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + Sbjct: 121 EEIVAEVMPGIIRDFPWPKSMRWGKASSKSGALRWVRPLQSIVCTFGPEHEE 172 >gi|167010541|ref|ZP_02275472.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica FSC200] Length = 233 Score = 224 bits (572), Expect = 3e-56, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 121/244 (49%), Gaps = 22/244 (9%) Query: 1 MP----DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYL 56 M DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL + Sbjct: 1 MSKITKDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFII 60 Query: 57 KGLSPHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 KGL+ + + E+ GP + G + GF +S G++ ++ KGD Sbjct: 61 KGLAESQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVA--TPKGDKLF 118 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 + + ++L+ I+ A++++P K MRW + S+ ++RP+ +L + + Sbjct: 119 YKTVQSGQATVNLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLALYGND- 172 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++D+++ NITYGHRFH P I + ++ YI+ L +AMV+ + + R+ ++ Sbjct: 173 ----VVDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIGNWQQRKQMLVE 228 Query: 231 DAHR 234 A Sbjct: 229 QAEN 232 >gi|217032651|ref|ZP_03438138.1| hypothetical protein HPB128_19g12 [Helicobacter pylori B128] gi|216945661|gb|EEC24289.1| hypothetical protein HPB128_19g12 [Helicobacter pylori B128] Length = 316 Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats. Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 18/304 (5%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDPKHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHAK-QPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 G--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHHIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAV 296 Query: 293 RTRE 296 +++ Sbjct: 297 FSQK 300 >gi|329920070|ref|ZP_08276901.1| putative glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 1401G] gi|328936524|gb|EGG32968.1| putative glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 1401G] Length = 290 Score = 214 bits (544), Expect = 5e-53, Method: Composition-based stats. Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 29/297 (9%) Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EF ELQG +G YA L E + AI+E P ++PT KI +S+ADKLDT Sbjct: 1 MVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTTKIGSLLSIADKLDT 60 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------- 530 +I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 61 IIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDIIALLKGKTVAKLP 120 Query: 531 -----DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + F +R+K L + +D+I+ +L N+ I+ + L E +K Sbjct: 121 NDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILSIADILQENHDDSK 180 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 +K + S RI IL + E +I+P +EK LY I+ Sbjct: 181 FKKVVESLTRIANILKKADFSEAE---QINPDLFENNSEKALYDKINLL------LDKSL 231 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + + I+ +FD ++ + V+ NRLS L+ I + L ++ K+V Sbjct: 232 DVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKLALEFGDLSKLV 288 >gi|157850888|gb|ABV90251.1| glycyl-tRNA synthetase beta subunit [Bacillus subtilis subsp. sadata] Length = 268 Score = 214 bits (544), Expect = 5e-53, Method: Composition-based stats. Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 12/272 (4%) Query: 437 IGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKP 496 +G++YA + E+ + A+ EH PR P+ V++ADKLDT+ +F++I P Sbjct: 1 MGEKYARMLGEDEAVAAAVNEHYMPRSAGGETPSTFTGAVVAMADKLDTITSFFSIGVIP 60 Query: 497 SGSKDPYALRRATLGIIRIILENKIDIPLSQF------IEDQNLILFFHDRLKLYLHDRD 550 +GS+DPY LRR GI+ I+L+ I + ++ L+ FF RLK L+ Sbjct: 61 TGSQDPYGLRRQASGIVAILLDRNWGISFEELLTFVQTDKENELLDFFTQRLKYVLNAEQ 120 Query: 551 IRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI 610 IRHD+I+A+L + + + L + + ++ + R+ I + Sbjct: 121 IRHDVIDAVLESSELEPYSALHKAQVLEQKLGAPGFKETAEALGRVISISKKG------V 174 Query: 611 SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 +I P E E +L+ ++QE+ K Y L ++ EPI+ +FD +V Sbjct: 175 RGDIQPDLFENEYEAKLFDAYQTAKQNLQENFSKKDYEAALASLAALKEPIDAYFDHTMV 234 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 D+ ++ NRL+ + + + I N+ ++ Sbjct: 235 IADNESLKANRLAQMVSLADEIKSFANMNALI 266 >gi|213026092|ref|ZP_03340539.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 232 Score = 209 bits (532), Expect = 1e-51, Method: Composition-based stats. Identities = 60/234 (25%), Positives = 108/234 (46%), Gaps = 18/234 (7%) Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 +DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 1 MDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTN 60 Query: 532 ----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++I F R + + D D I+A+L +K ++ F + + Sbjct: 61 ASVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMKAVSHFRTLEEAS 120 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KR+ ILA K ++ + L AE L + +Q RY Sbjct: 121 ALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLRDKLQPYFADGRY 177 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V ++ + Sbjct: 178 QEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVADISLL 231 >gi|218677813|ref|ZP_03525710.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli CIAT 894] Length = 214 Score = 207 bits (527), Expect = 5e-51, Method: Composition-based stats. Identities = 113/203 (55%), Positives = 150/203 (73%) Query: 429 EFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLIN 488 EFPELQG +G++YAVLQ EN S AIE+H KP+GP + VP +K++ITV+LADKLDTLI Sbjct: 2 EFPELQGLMGRKYAVLQGENASVAAAIEDHYKPQGPSDRVPEDKVAITVALADKLDTLIG 61 Query: 489 FWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHD 548 FWAI+EKP+GSKDP+ALRRA LG++RI+LE ++ +PL +D +L+ FFHDRLK+YL D Sbjct: 62 FWAIDEKPTGSKDPFALRRAALGVVRILLERRVRLPLLATSKDTDLLSFFHDRLKVYLRD 121 Query: 549 RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR 608 + RHDLI+A+L PE D+LL + ++ L F +S G+ L KR Q+LA EEKK Sbjct: 122 QGARHDLIDAVLTPEADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQLLAAEEKKGT 181 Query: 609 EISLEISPQYLLLEAEKRLYAVI 631 I+ +SP L L+AEK L+A I Sbjct: 182 VIADAVSPALLKLDAEKELFAAI 204 >gi|1780765|emb|CAA71457.1| unnamed protein product [Coxiella burnetii] Length = 255 Score = 196 bits (497), Expect = 2e-47, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 142/289 (49%), Gaps = 35/289 (12%) Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 MRW ++RP+ I+ +L + ++ L T GHRFH P I Sbjct: 1 MRWGDHKEF-----FVRPVHWIILMLGKD-----LVPATLLGKMASCETRGHRFHHPKNI 50 Query: 201 KVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEW 259 V D Y + L V+ D E RR + D + A++ E + D+ LLEE+ G+VEW Sbjct: 51 LVTKPDDYQKLLLTHGMVIADFEKRRE-KIRDLIQKAASEKGEAIIDEGLLEEVTGMVEW 109 Query: 260 VQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIV 319 + +G+F ++L LP E++ T+K +Q+ F + + G L FI+VSNI++ ++ Sbjct: 110 PVILVGNFKAEFLKLPPEVLITTMKVHQRTFPIKNKNGDLLPYFIIVSNIESK-NPKRVI 168 Query: 320 QGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVF 379 GN RV+ ARL DA F+ D L L+ R+ +L DV+F Sbjct: 169 VGNERVINARLADASFFYDND--------------------LRTSLENRLPKLG--DVIF 206 Query: 380 HAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVR 428 ++GT ++ RI L IA+ I+ D L RA +LSK DL +E+V Sbjct: 207 QRQLGTLADKARRIEKLAAFIAKQINIDEQLAARAGLLSKCDLVSEMVY 255 >gi|222873658|gb|EEF10789.1| predicted protein [Populus trichocarpa] Length = 245 Score = 193 bits (490), Expect = 1e-46, Method: Composition-based stats. Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 56/243 (23%) Query: 515 IILENKIDIPLSQFI---------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-- 563 I++EN + + L + ++L+ FFHDRLK+YL D+ RHDLI+A+L Sbjct: 1 IVVENGVRLALLKAFRKARNVSAENTEDLLSFFHDRLKVYLRDQGARHDLIDAVLASGRP 60 Query: 564 ---------------------------------------------NDNLLTIVDLIKHLN 578 ND+LL IV ++ L+ Sbjct: 61 ISPLEGEMSPKATEGGAVPPTSQSVTPPSALPGISPSRGEITPSSNDDLLLIVRRVEALS 120 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 + + G+ L KR ILA EEKK I+ + P L E E RL++ ++ Sbjct: 121 DLLGTETGQNLLAGTKRAANILAAEEKKGTRIAEAVDPALLKEEQEIRLFSAVNQAEKEA 180 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 E++ + + L ++ EPI+ FF++VLVN ++ +R NRL+LLQ I+ V + Sbjct: 181 GEAIQKQDFSAAMTALAALREPIDSFFEKVLVNDENDSIRANRLALLQRIREATGRVADF 240 Query: 699 QKI 701 KI Sbjct: 241 SKI 243 >gi|312906134|ref|ZP_07765146.1| glycyl-tRNA synthetase subunit beta domain protein [Enterococcus faecalis DAPTO 512] gi|310627780|gb|EFQ11063.1| glycyl-tRNA synthetase subunit beta domain protein [Enterococcus faecalis DAPTO 512] Length = 253 Score = 191 bits (484), Expect = 5e-46, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 24/255 (9%) Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 1 MPETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQ 60 Query: 528 FIEDQN--------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + + ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 61 LQTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL 120 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + L F + + + R+ + ++ + I P +AEK L Sbjct: 121 SKLFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKEL 180 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 Y ++D + Y L ++ I+ +F++ +V V+D +V+ NRL L Sbjct: 181 YQAVNDLSEAFATRTIAENYE----ALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQ 236 Query: 688 IKNIILIVINVQKIV 702 I + L + ++ ++ Sbjct: 237 IAKMALSIASLDLLI 251 >gi|303233802|ref|ZP_07320456.1| glycine--tRNA ligase, beta subunit [Finegoldia magna BVS033A4] gi|302495236|gb|EFL54988.1| glycine--tRNA ligase, beta subunit [Finegoldia magna BVS033A4] Length = 562 Score = 176 bits (446), Expect = 1e-41, Method: Composition-based stats. Identities = 119/615 (19%), Positives = 229/615 (37%), Gaps = 125/615 (20%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L++I ++ IP L + K+ ++Y N+ Sbjct: 1 MHNLLIDIVTKNIPNDFIGFINRSLYEKIRKEFKKLQLLYSNID---------------- 44 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 L TI D Y+ + K + Sbjct: 45 ------------------------------LDTIKDHFFI--------YVTSIENTKYTL 66 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED +TI+ AI + + + S+ +SIL I + + + K I+ + Sbjct: 67 EDY-ETIIINAIDSINFK-------YKYNHESLSFK---ESILQIKIFNEEQHKTINFND 115 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + N + + + + L + ++L + R + A++LA A G Sbjct: 116 VDENKNN----------ELVNSSTFNDFSSALLKNEIILKKDQRLESFEKSANKLARANG 165 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ++ +K ++ E ++ GSFD+KYLC+ + ++ + N K G + Sbjct: 166 CSIINNKSIMNEYANKFDYPVSVEGSFDEKYLCIDKSILYTVLMENFKVLPMEFENGNSS 225 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F+ N + D RV+ A + + L+E Sbjct: 226 NFFVYAKNKNSEDS---------RVLCAEINN----------------KLEEINNLITKK 260 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDRAIVL 417 K L+ + L +V + G ++ R+ + ++ +++ V+R L Sbjct: 261 SDKKLEDFVEDLK--NVTYINNYGNFYDKTQRLIKISPELCKMLSVSEETVNSVNRISFL 318 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 KAD TEIV++ P L G IG+ YA E D + EH+KPR E++P + + V Sbjct: 319 CKADKATEIVKKCPYLHGLIGRLYAKSDGEEKIVYDGVYEHIKPRFISESIPNSTAARIV 378 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +++DK++ +++ + I+ K Y LR+ +I IIL++++D LS F Sbjct: 379 AISDKMEYVMS-YIISSSDENFKYNYKLRKTITSVISIILKSELDFNLSDFITKILYVFL 437 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ D + D I+ ++ N N+ + L+ +L+E Sbjct: 438 QDKGIVDYEYFEKSIKEIILDVYRDECIKSGYDFDEID-VINYANLNIFKLNRLLTNLHE 496 Query: 580 FFSSAKGEKFLLSAK 594 S G+ L K Sbjct: 497 INSKYNGKLMLQIQK 511 >gi|302380525|ref|ZP_07268990.1| glycine--tRNA ligase, beta subunit [Finegoldia magna ACS-171-V-Col3] gi|302311468|gb|EFK93484.1| glycine--tRNA ligase, beta subunit [Finegoldia magna ACS-171-V-Col3] Length = 562 Score = 175 bits (445), Expect = 1e-41, Method: Composition-based stats. Identities = 119/615 (19%), Positives = 229/615 (37%), Gaps = 125/615 (20%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L++I ++ IP L + K+ ++Y N+ Sbjct: 1 MHNLLIDIVTKNIPNDFIGFINRSLYEKIRKEFKKLQLLYSNID---------------- 44 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 L TI D Y+ + K + Sbjct: 45 ------------------------------LDTIKDHFFI--------YVTSIENTKYTL 66 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED +TI+ AI + + + S+ +SIL I + + + K I+ + Sbjct: 67 EDY-ETIIINAIDSINFK-------YKYNRESLSFK---ESILQIKIFNEEQHKTINFND 115 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + N + + + + L + ++L + R + A++LA A G Sbjct: 116 VDENKNN----------ELVNSSTFNDFSSALLKNEIILKKDQRLESFEKSANKLARANG 165 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ++ +K ++ E ++ GSFD+KYLC+ + ++ + N K G + Sbjct: 166 CSIINNKSIMNEYANKFDYPVSVEGSFDEKYLCIDKSILYTVLMENFKVLPMEFENGNSS 225 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F+ N + D RV+ A + + L+E Sbjct: 226 NFFVYAKNKNSEDS---------RVLCAEINN----------------KLEEINNLITKK 260 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDRAIVL 417 K L+ + L +V + G ++ R+ + ++ +++ V+R L Sbjct: 261 SDKKLEDFVEDLK--NVTYINNYGNFYDKTQRLIKISPELCKMLSVSEETVNSVNRISFL 318 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 KAD TEIV++ P L G IG+ YA E D + EH+KPR E++P + + V Sbjct: 319 CKADKATEIVKKCPYLHGLIGRLYAKSDGEEKIVYDGVYEHIKPRFISESIPNSTAARIV 378 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +++DK++ +++ + I+ K Y LR+ +I IIL++++D LS F Sbjct: 379 AISDKMEYVMS-YIISSSDENFKYNYKLRKTITSVISIILKSELDFNLSDFITKILYVFL 437 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ D + D I+ ++ N N+ + L+ +L+E Sbjct: 438 QDKGIVDYEYFEKSIKEIILDVYRDECIKSGYDFDEID-VINYANLNIFKLNRLLTNLHE 496 Query: 580 FFSSAKGEKFLLSAK 594 S G+ L K Sbjct: 497 INSKYNGKLMLQIQK 511 >gi|169824435|ref|YP_001692046.1| glycyl-tRNA synthetase subunit beta [Finegoldia magna ATCC 29328] gi|167831240|dbj|BAG08156.1| glycyl-tRNA synthetase beta subunit [Finegoldia magna ATCC 29328] Length = 562 Score = 175 bits (445), Expect = 1e-41, Method: Composition-based stats. Identities = 119/615 (19%), Positives = 229/615 (37%), Gaps = 125/615 (20%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L++I ++ IP L + K+ ++Y N+ Sbjct: 1 MHNLLIDIVTKNIPNDFIGFINRSLYEKIRKEFKKLQLLYSNID---------------- 44 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 L TI D Y+ + K + Sbjct: 45 ------------------------------LDTIKDHFFI--------YVTSIENTKYTL 66 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED +TI+ AI + + + S+ +SIL I + + + K I+ + Sbjct: 67 EDY-ETIIINAIDSINFK-------YKYNHESLSFK---ESILQIKIFNEEQHKTINFND 115 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + N + + + + L + ++L + R + A++LA A G Sbjct: 116 VDENKNN----------ELVNSSTFNDFSSALLKNEIILKKDQRLESFEKSANKLARANG 165 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ++ +K ++ E ++ GSFD+KYLC+ + ++ + N K G + Sbjct: 166 CSIINNKSIMNEYANKFDYPVSVEGSFDEKYLCIDKSILYTVLMENFKVLPMEFENGNSS 225 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F+ N + D RV+ A + + L+E Sbjct: 226 NFFVYAKNKNSEDS---------RVLCAEINN----------------KLEEINNLITKK 260 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDRAIVL 417 K L+ + L +V + G ++ R+ + ++ +++ V+R L Sbjct: 261 SDKKLEDFVEDLK--NVTYINNYGNFYDKTQRLIKISPELCKMLSVSEETVNSVNRISFL 318 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 KAD TEIV++ P L G IG+ YA E D + EH+KPR E++P + + V Sbjct: 319 CKADKATEIVKKCPYLHGLIGRLYAKSDGEENIVYDGVYEHIKPRFISESIPNSTAARIV 378 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +++DK++ +++ + I+ K Y LR+ +I IIL++++D LS F Sbjct: 379 AISDKMEYVMS-YIISSSDENFKYNYKLRKTITSVISIILKSELDFNLSDFITKILYVFL 437 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ D + D I+ ++ N N+ + L+ +L+E Sbjct: 438 QDKGIVDYEYFEKSIKEIILDVYRDECIKSGYDFDEID-VINYANLNIFKLNRLLTNLHE 496 Query: 580 FFSSAKGEKFLLSAK 594 S G+ L K Sbjct: 497 INSKYNGKLMLQIQK 511 >gi|322515764|ref|ZP_08068716.1| glycyl-tRNA synthetase beta subunit [Actinobacillus ureae ATCC 25976] gi|322118136|gb|EFX90477.1| glycyl-tRNA synthetase beta subunit [Actinobacillus ureae ATCC 25976] Length = 207 Score = 175 bits (444), Expect = 2e-41, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 15/206 (7%) Query: 394 RVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCD 453 L +IA I AD A +RA +LSK DL T +V EF + QG +G YA E+ Sbjct: 1 EALAGEIAAQIGADKAKAERAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAV 60 Query: 454 AIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII 513 A+ E PR + +P + ++ +V+LADK DTL + I + P GS DP+ALRRA LG + Sbjct: 61 ALNEQYMPRFAGDELPKSLVACSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSL 120 Query: 514 RIILENKIDIPLSQFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEA 558 RII+E + + L + ++++ F R + + D I D+I+A Sbjct: 121 RIIVEKNLPLDLEDLVRKSAALFGDKLINANVVEDVVGFMLGRFRAWYQDEGIAVDVIQA 180 Query: 559 ILRPENDNLLTIVDLIKHLNEFFSSA 584 +L ++ ++ F + Sbjct: 181 VLARRPTRPADFDARVRAVSHFRTLD 206 >gi|330867891|gb|EGH02600.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 183 Score = 174 bits (441), Expect = 5e-41, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 76/178 (42%), Gaps = 3/178 (1%) Query: 524 PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + + ++ F DR++ D + + ++ + + L ++ + F Sbjct: 8 KIKPAGLAEQVLDFIFDRMRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAFRKL 67 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + KR+ +L+ E I+ + P+Y E LY+ I +Q Sbjct: 68 PQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADHAVQPMAA 124 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ + Sbjct: 125 ERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADISLL 182 >gi|163784177|ref|ZP_02179112.1| Glycyl-tRNA synthetase, beta subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159880550|gb|EDP74119.1| Glycyl-tRNA synthetase, beta subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 223 Score = 174 bits (440), Expect = 6e-41, Method: Composition-based stats. Identities = 56/235 (23%), Positives = 95/235 (40%), Gaps = 26/235 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKE--EGVIYQNMRQYWTPHRLFLYLKG 58 M +LLEI EE+P + + A E L L L + N+ ++ TP R+ +K Sbjct: 1 MAQYLLEIGCEELPPKAVNTAREFLKEKLNELFFNFFQYHSPDNIEEFATPRRIGFLVKN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P + + +GP G KA F + I+ + KG A Sbjct: 61 LNEKQPPEKKVIIGPPAKVAVDEEGKFTKAALAFASKNNIPIEELKIIENE--KGRYVGA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + K R I V++ +P I K+P+PK+M+W S F + RP++ I+ +L Sbjct: 119 EIIKEGRDIRQVIEKELPEIISKIPFPKTMKWDN-----SGFRFSRPVRWIVSLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-----HPIKVQSLDHYIRDLEEAMVLLDP 221 +I+ L I T+ HRF ++ +Y + ++ Sbjct: 169 DNEIVPFKLGNITADRYTHLHRFMTKPIGRGEKKEIPEASNYEEITKMGFIIAKY 223 >gi|313637824|gb|EFS03163.1| glycyl-tRNA synthetase, beta subunit [Listeria seeligeri FSL S4-171] Length = 236 Score = 172 bits (437), Expect = 1e-40, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 28/242 (11%) Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 +ADKL+T + F+ +N P+GS DP+ LRR+ G +RII N DIP+ + + Sbjct: 1 IADKLETFVGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPVLELLSRIVDMERA 60 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + F +RL++ L + IRHD+I+A++ + + + +VD + LN+ Sbjct: 61 EGAVELPSDDVKREVQTFLKNRLRVVLQNHHIRHDIIDAVIGGDPNVIPQLVDRAQILNK 120 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 S + + R+ I E+ +E+ P E E L+ + Sbjct: 121 HVESEWFRPTVEALTRVLNISKKYEEG-----VEVDPALFENEYEHALFDKLEKLKYDYA 175 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +R + I+ +FD LV D+ E+++NRL+LL + + I + Sbjct: 176 SLTILER----LRAFAGLRTTIDDYFDNTLVMSDNLELKNNRLALLFELASFIKEFAQMD 231 Query: 700 KI 701 +I Sbjct: 232 EI 233 >gi|329915034|ref|ZP_08276201.1| Glycyl-tRNA synthetase beta chain [Oxalobacteraceae bacterium IMCC9480] gi|327544995|gb|EGF30325.1| Glycyl-tRNA synthetase beta chain [Oxalobacteraceae bacterium IMCC9480] Length = 166 Score = 170 bits (431), Expect = 6e-40, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 4/167 (2%) Query: 535 ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 + F +DRL+ L +R + IEA++ + D L I+D + ++ F + + E + K Sbjct: 2 LAFLYDRLRGLLRERGFTPNEIEAVVAQQPDVLENIIDRLDAVHAFAALPEAESLAAANK 61 Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 RI IL KK I + L AE+ LY ++ H+ + + L Sbjct: 62 RITNIL----KKTEGIPGPVHTGLLREVAEEALYGAMALLQPHVDAAFAKGDFSGTLLSL 117 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FF V+V +D ++R NR++LL + ++ V ++ K+ Sbjct: 118 AQLRHNVDAFFKDVMVMDEDAQLRANRIALLSQLHAMMNRVADISKL 164 >gi|145628142|ref|ZP_01783943.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.1-21] gi|144979917|gb|EDJ89576.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.1-21] Length = 163 Score = 167 bits (423), Expect = 6e-39, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 9/142 (6%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPW 137 + +++L IV A+ + Sbjct: 123 EGQPTKNLLNDIVANALANCQF 144 >gi|47679391|gb|AAT36676.1| glycyl-tRNA synthetase [Oenococcus oeni PSU-1] Length = 248 Score = 164 bits (416), Expect = 4e-38, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 126/256 (49%), Gaps = 34/256 (13%) Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +K+ ++LADKLDTL +F+A PSGS DPY LRRA LGI+RII + K + +S+ + Sbjct: 1 SKVGAMLALADKLDTLFSFFAAGIIPSGSNDPYGLRRAALGIVRIIGQQKWNFSVSKLLH 60 Query: 531 D-----------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + +I FF DR++ D IR+DL++A N+ + Sbjct: 61 SLKTAVDKHEDGFLIDFADTKEISRKVIEFFLDRIRQQSSD--IRYDLLDASTGKVNEGI 118 Query: 568 LT-IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + I ++ L + + + R+ + + ++EI P+ + +EKR Sbjct: 119 INYIFKRVRILASHVADPDFRDVIEALTRVQNLAEKNKS-----NVEIDPELFVTNSEKR 173 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY + D + + H + L S+ EPI +FD+ ++ + +++NR++ + Sbjct: 174 LYQLTKDKDPIV--LLSKGD-HTVYQFLASLKEPINNYFDENMIMDKNPIIKNNRVAQIN 230 Query: 687 YIKNIILIVINVQKIV 702 + N+I + +++K+V Sbjct: 231 LLNNLISSLGDLRKVV 246 >gi|270726109|ref|ZP_06223427.1| glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae HK1212] gi|270315246|gb|EFA27578.1| glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae HK1212] Length = 141 Score = 163 bits (413), Expect = 8e-38, Method: Composition-based stats. Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 9/139 (6%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQK 134 + +++L IV A+ K Sbjct: 123 EGQPTKNLLNDIVANALAK 141 >gi|297588414|ref|ZP_06947057.1| glycyl-tRNA synthetase beta subunit [Finegoldia magna ATCC 53516] gi|297573787|gb|EFH92508.1| glycyl-tRNA synthetase beta subunit [Finegoldia magna ATCC 53516] Length = 562 Score = 162 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 112/615 (18%), Positives = 225/615 (36%), Gaps = 125/615 (20%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L++I + IP L + LK+ ++Y N+ Sbjct: 1 MYNLLIDIVTNNIPENFIGFINRSLDEKIRKELKKLQLVYSNID---------------- 44 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 L TI D Y+ L P + Sbjct: 45 ------------------------------LDTIKDHFFI--------YITNLENPGYTL 66 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED + ++ AI + + + + S+ +SIL I + + + K I+ Sbjct: 67 EDY-ENVINKAIDSINFK-------YNYDSESLSFR---ESILYIKIFNEKENKTIEFKG 115 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + + + + +++ +L + ++L R + A++LA A G Sbjct: 116 LKEDKDDSL----------VNSSTFNNFSSELRKNQIILKKGERLQSFEKSANKLARANG 165 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ++ +K +L E ++ GSFD+K+LC+ + ++ + N K G + Sbjct: 166 CSIINNKSILNEYANKFDYPVSVEGSFDEKFLCIDKSILYTVLMENFKVLPMEFDNGNSS 225 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F+ N + D I + N + L+E N Sbjct: 226 NFFVYAKNKSSEDSHVLIKEINDK-------------------------LEEIDNLINQK 260 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---RAIVL 417 + L+ + L V + G ++ R+ + ++ +++ +D R L Sbjct: 261 SDRKLEDFVEDLKT--VNYINNYGNFYDKTQRLIKISIELCKMLSVSQETIDSVRRIAFL 318 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 KAD TEIV++ L G IG+ YA E+ + + EH+KPR EN+P + + V Sbjct: 319 CKADKATEIVQKCSYLHGLIGRLYAKSDGEDKIVYEGVYEHIKPRFISENIPNSTAARIV 378 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +++DK++ +++ + I+ K Y LR+ +I IIL++++D LS F Sbjct: 379 AISDKMEYVMS-YIISSSDDNFKYNYKLRKTITSVISIILKSELDFNLSDFITKILYVFL 437 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ D + D ++ ++ + N+ L+ +L+E Sbjct: 438 QDKGIVDYEYFEKSIKEIILDVYRDECIKLGYDFDEVD-VINYDTLNIFKSNRLLTNLHE 496 Query: 580 FFSSAKGEKFLLSAK 594 + G+ K Sbjct: 497 LNTKNNGKLMAQILK 511 >gi|262189969|ref|ZP_06048278.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae CT 5369-93] gi|262034154|gb|EEY52585.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae CT 5369-93] Length = 141 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 3/142 (2%) Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 + +K ++ F + + E + KR+ ILA K + E+ EI L Sbjct: 1 MARNPTKPADFDQRVKAVSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALL 57 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 +AEK L + ++ + Y + L + P++ FFD V+V DD ++ Sbjct: 58 QEDAEKALAEAVEIMAEALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKK 117 Query: 680 NRLSLLQYIKNIILIVINVQKI 701 NRL+LL ++N+ L + ++ + Sbjct: 118 NRLTLLNKLRNLFLQIADISLL 139 >gi|207091643|ref|ZP_03239430.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori HPKX_438_AG0C1] Length = 233 Score = 160 bits (404), Expect = 9e-37, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 103/237 (43%), Gaps = 18/237 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + + ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEAGTIEVFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHEK-EPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + I++ T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKIL 233 >gi|213024988|ref|ZP_03339435.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 134 Score = 159 bits (402), Expect = 2e-36, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 11/136 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTI 127 E +L + Sbjct: 119 RAYVKGESTEALLPNM 134 >gi|34763772|ref|ZP_00144688.1| Glycyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886448|gb|EAA23707.1| Glycyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 227 Score = 159 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 73/246 (29%), Positives = 128/246 (52%), Gaps = 28/246 (11%) Query: 278 LIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFW 337 ++ +++K +Q+ F +++G L FI++ N D + +GN +V++ARL DA F+ Sbjct: 1 MLIISMKVHQRYFPVLSKKGKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFY 58 Query: 338 KRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG 397 D L PLD + +L VVF +GT ++V R + Sbjct: 59 YED--------------------LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIA 96 Query: 398 KKIAQLIDAD--VALVDRAIVLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCD 453 + + + + + + R + L+KADL + ++ E F +LQG +G+ YA+ E I Sbjct: 97 EFLVEKLKYNYMKEDILRTVKLAKADLVSNMINEKEFTKLQGFMGENYALKGGEEIGVAL 156 Query: 454 AIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII 513 I+EH PR + +P+ I ++D++DTL+ + + P+GSKDP+ALRR LGI+ Sbjct: 157 GIKEHYYPRFQGDLLPSGIEGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIV 216 Query: 514 RIILEN 519 II++ Sbjct: 217 NIIIKA 222 >gi|58698041|ref|ZP_00372965.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|58535398|gb|EAL59473.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] Length = 223 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 14/228 (6%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL-SPHSPEKIEERLGPRV 75 MQ+ A + + + + V + +M + T R+ L++ + + + E GP + Sbjct: 1 MQNSATVQVKSCIANVFNKNNVKFTSMEVFITARRITLFVDNINALELKDSNNEVKGPNI 60 Query: 76 GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKV 135 A K AI+GFLR Q + + + D Y I + LK + ++ Sbjct: 61 NAPKSAIEGFLRKY--QKNEEDLLVRKVNNEDFYFIKRESCSFNIREFLKNQLEEMLKNF 118 Query: 136 PWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFH 195 W KSMRW W+RP+K+ILCIL ++II + I N TYGHRF Sbjct: 119 SWLKSMRWGEGKE-----RWVRPIKNILCIL-----NDEIIPVSFAGITASNTTYGHRFL 168 Query: 196 APHP-IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 + + V++ Y LE+ V+L + R+ IL+ ++ Sbjct: 169 SSGTALTVKAPKDYFELLEKNSVILQMDKRKQFILDQINKFTKEQNYN 216 >gi|11120072|gb|AAG30824.1|AF286536_1 GlyS-like protein [Pseudomonas fluorescens] Length = 199 Score = 157 bits (397), Expect = 6e-36, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 85/200 (42%), Gaps = 19/200 (9%) Query: 515 IILENKIDIPLSQFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAI 559 I+++ ++D+ L+ + ++ F DRL+ D + ++ Sbjct: 1 ILIDKQLDLDLNDAVAFAVNAFGSKVKSAGLADAVLEFIFDRLRARYEDEGVEVATYLSV 60 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 + + L ++ + F + KR+ +L+ E + + +Y Sbjct: 61 RALKPGSALDFDQRVQAVQAFRKLPEAAALASVNKRVSNLLSKAEPSVK----AVEARYF 116 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 AE L + I +Q M+ + Y + L ++ EP++ FF+ V+VN D+ +VR Sbjct: 117 DNAAEFSLNSAIQQAYASVQPLMEKRDYAEALARLAALREPVDAFFEAVMVNADNEDVRK 176 Query: 680 NRLSLLQYIKNIILIVINVQ 699 NR +LL ++++ L + ++ Sbjct: 177 NRYALLARLRSLFLNIADIS 196 >gi|167950242|ref|ZP_02537316.1| glycyl-tRNA synthetase subunit beta [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 143 Score = 151 bits (382), Expect = 4e-34, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 3/139 (2%) Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 ++ ++ + F + E + KRI +L K + E+ ++ Q L Sbjct: 5 RPKSIADFYRRLEAVKAFRDLDESEALAAANKRIQNLLK---KVDGEVQEHVNTQLLKQP 61 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 E+ L + + ++ Y L + +P++ FFDQVLV D ++R+NRL Sbjct: 62 EERELNDQLQAMKLRVSPMIESADYQGTLMGLAELRQPVDRFFDQVLVMADQADIRNNRL 121 Query: 683 SLLQYIKNIILIVINVQKI 701 +LL+ + N+ L V +V + Sbjct: 122 ALLKGLSNLFLKVADVSML 140 >gi|329925854|ref|ZP_08280583.1| glycine--tRNA ligase, beta subunit family protein [Paenibacillus sp. HGF5] gi|328939600|gb|EGG35948.1| glycine--tRNA ligase, beta subunit family protein [Paenibacillus sp. HGF5] Length = 194 Score = 150 bits (380), Expect = 6e-34, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 8/173 (4%) Query: 531 DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL-NEFFSSAKGEKF 589 ++L FF R+K L + D R+D+++A++ D+++++V L N S + Sbjct: 28 RKDLKEFFGLRVKKLLSE-DQRYDVVDAVITAGFDHVVSVVSRGHALMNAVESVQDFKTT 86 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R+ + A K ++ + E +LY + ++ + Sbjct: 87 VESFNRVSNLAAKAGKA------AVNAELFTESEENKLYEAWNAIRADYHAALQAAEGER 140 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 LL + EPI FFD V+V +D VR NRL+LL I + + K+V Sbjct: 141 SLSLLSGLREPITGFFDSVMVMAEDEAVRANRLALLSGIDGDLKQYADFTKLV 193 >gi|99036058|ref|ZP_01315094.1| hypothetical protein Wendoof_01000064 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 193 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 14/192 (7%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M L E SEEIP RMQ+ A + + + + V + +M + T R+ L++ + Sbjct: 1 MSLQLLFECLSEEIPPRMQNVVATQVKSCIANVFNKNNVKFTSMEVFITARRITLFVDNI 60 Query: 60 -SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 + + E GP + A K AI+GFLR Q + + + D Y Sbjct: 61 NALELKDSNNEVKGPNINAPKSAIEGFLRKY--QKNEEDLLVRKVNNEDFYFIKRESCSF 118 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 I + LK + ++ W KSMRW W+RP+K+ILCIL ++II + Sbjct: 119 NIREFLKNQLEEMLKNFSWLKSMRWGEGKE-----RWVRPIKNILCIL-----NDEIIPV 168 Query: 179 DLKEIPCGNITY 190 I N TY Sbjct: 169 SFARITASNTTY 180 >gi|110589424|gb|ABG77221.1| glycyl-tRNA synthetase beta subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 238 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 15/194 (7%) Query: 384 GTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAV 443 R+ L IA+ I AD V RA +LS+ DL TE+V EFPE+QG +G+ A Sbjct: 33 AAWPTNRERVADLAIYIAEQIGADQERVRRAGLLSRCDLMTEMVYEFPEMQGIMGRYQAQ 92 Query: 444 LQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPY 503 E+ A++E PR + +P ++ I ++LA+++DTL+ + I KP+G KDP+ Sbjct: 93 RDGEDAELAQAMDEFYMPRFSGDQLPQSQTGIAIALAERIDTLVGIFGIGMKPTGDKDPF 152 Query: 504 ALRRATLGIIRIILENKIDIPLSQFIEDQN---------------LILFFHDRLKLYLHD 548 ALRRA LG IRI+ E+ + + L I + + F +RLK + Sbjct: 153 ALRRAALGAIRIMSEHSLSVNLPDLIANSAELLADKIEQNDTIVLVYDFIIERLKGVCLE 212 Query: 549 RDIRHDLIEAILRP 562 + I D +A+ Sbjct: 213 QGISSDQFQAVASD 226 >gi|322515582|ref|ZP_08068563.1| glycyl-tRNA synthetase beta subunit [Actinobacillus ureae ATCC 25976] gi|322118385|gb|EFX90651.1| glycyl-tRNA synthetase beta subunit [Actinobacillus ureae ATCC 25976] Length = 113 Score = 147 bits (370), Expect = 9e-33, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 4/116 (3%) Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E + KR+ ILA + E++P + AEK L + T +Q + Sbjct: 1 AEALAAANKRVSNILAKAD----VAIGEVNPTACVEPAEKALAEAVLGLRTEVQPLIAQG 56 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + D L S+ +P++ FFD V+VN +D E+R NRL++L ++ + L V ++ + Sbjct: 57 EYTAVLDKLASLRQPVDNFFDNVMVNAEDPELRQNRLAILNTLQGLFLQVADISLL 112 >gi|42768709|gb|AAS45570.1| putative glycyl-tRNA synthetase beta chain [Aeromonas hydrophila] Length = 162 Score = 146 bits (369), Expect = 1e-32, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 3/164 (1%) Query: 538 FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 R + D I D++ A+L L +K ++ F + + KR+ Sbjct: 1 MLGRFRAAYQDEGIGADVVLAVLARRPTRPLDFDRRVKAVSHFRTLDAALALAAANKRVS 60 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 ILA K E+ + P+ L+ AEK L +++ + Y L ++ Sbjct: 61 NILA---KVEGELPTAVKPELLVDAAEKALATQVAELQAELAPLFAAGDYQAALTRLAAL 117 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 EP++ FF++V+V DD ++ NRL+LL ++N+ L V ++ + Sbjct: 118 REPVDTFFNEVMVMADDEALKANRLALLNNLRNLFLQVADISLL 161 >gi|167950241|ref|ZP_02537315.1| Glycine--tRNA ligase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 219 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 15/194 (7%) Query: 384 GTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAV 443 R+ L IA+ I AD V RA +LS+ DL TE+V EFPE+QG +G+ A Sbjct: 14 AAWPTNRERVADLAIYIAEQIGADQERVRRAGLLSRCDLMTEMVYEFPEMQGIMGRYQAQ 73 Query: 444 LQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPY 503 E+ A++E PR + +P ++ I ++LA+++DTL+ + I KP+G KDP+ Sbjct: 74 RDGEDAELAQAMDEFYMPRFSGDQLPQSQTGIAIALAERIDTLVGIFGIGMKPTGDKDPF 133 Query: 504 ALRRATLGIIRIILENKIDIPLSQFIEDQN---------------LILFFHDRLKLYLHD 548 ALRRA LG IRI+ E+ + + L I + + F +RLK + Sbjct: 134 ALRRAALGAIRIMSEHSLSVNLPDLIANSAELLADKIEQNDTIVLVYDFIIERLKGVCLE 193 Query: 549 RDIRHDLIEAILRP 562 + I D +A+ Sbjct: 194 QGISSDQFQAVASD 207 >gi|297519887|ref|ZP_06938273.1| glycyl-tRNA synthetase subunit beta [Escherichia coli OP50] Length = 116 Score = 145 bits (365), Expect = 3e-32, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 11/118 (9%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY 109 L+ P++ E+ GP + G KA +G+ R G+ ++ KG+ Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERL--TTDKGEWL 116 >gi|309807577|ref|ZP_07701529.1| glycine--tRNA ligase, beta subunit domain protein [Lactobacillus iners LactinV 01V1-a] gi|308169183|gb|EFO71249.1| glycine--tRNA ligase, beta subunit domain protein [Lactobacillus iners LactinV 01V1-a] Length = 151 Score = 144 bits (363), Expect = 5e-32, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 73/144 (50%), Gaps = 10/144 (6%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWP 138 + K+ E +L + ++++ +P Sbjct: 122 EGKKATEILLG--MDQIVKELAFP 143 >gi|145640588|ref|ZP_01796171.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae R3021] gi|145274514|gb|EDK14377.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae 22.4-21] Length = 150 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 9/121 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELIQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWAHGCGITVEQAERIATD--KGEWLVHCAKL 122 Query: 116 P 116 Sbjct: 123 K 123 >gi|330881827|gb|EGH15976.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. glycinea str. race 4] Length = 135 Score = 141 bits (356), Expect = 3e-31, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 53/141 (37%), Gaps = 15/141 (10%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAI 132 + + +L TIV ++ Sbjct: 115 SQTILGKPTKSLLPTIVEDSL 135 >gi|237736437|ref|ZP_04566918.1| glycyl-tRNA synthetase subunit beta [Fusobacterium mortiferum ATCC 9817] gi|229421479|gb|EEO36526.1| glycyl-tRNA synthetase subunit beta [Fusobacterium mortiferum ATCC 9817] Length = 161 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 76/164 (46%), Gaps = 6/164 (3%) Query: 538 FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 F R D D+I A++ + DNL+ ++ +K L F + K L KR+ Sbjct: 1 FKQRAINIFGDMGYSRDVIVAVVDKDCDNLVDALERVKTLESFAKEEEFGKLLPVLKRVG 60 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 I + I+P+ + EK LY + + +++ + Y + + + S Sbjct: 61 NISK------DHTDMIINPELFKEDIEKELYQFSVELSNKVNLAIEQRDYAKYLEEITSG 114 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + I +FD+++V D +++NRLS ++++ +I + ++ +I Sbjct: 115 KDIINNYFDKIIVMDKDEAIKNNRLSQMRFLTDIFTKMADLNQI 158 >gi|330976412|gb|EGH76468.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 134 Score = 140 bits (353), Expect = 9e-31, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 51/140 (36%), Gaps = 15/140 (10%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ Q G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLSEIDQS------GPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVA 131 + +L TIV + Sbjct: 115 SQTILGKPTTSLLPTIVEDS 134 >gi|3122895|sp|Q50945|SYGB_NEIGO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|595809|gb|AAA68008.1| glycyl tRNA synthetase beta chain [Neisseria gonorrhoeae] Length = 126 Score = 137 bits (346), Expect = 5e-30, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 4/128 (3%) Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + F + + KR+ +L KK E++ L + EK LYA Sbjct: 1 LQAVAVFKQLPEAAALAAANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQG 56 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 I ++ + L S+ ++ FFD V+V +D V+ NRL+LL + + Sbjct: 57 LQPKIAAAVAEGNFRTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMN 116 Query: 694 IVINVQKI 701 V ++ + Sbjct: 117 AVADIALL 124 >gi|330813969|ref|YP_004358208.1| glycyl-tRNA synthetase beta chain [Candidatus Pelagibacter sp. IMCC9063] gi|327487064|gb|AEA81469.1| glycyl-tRNA synthetase beta chain [Candidatus Pelagibacter sp. IMCC9063] Length = 194 Score = 137 bits (344), Expect = 8e-30, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 78/181 (43%), Gaps = 2/181 (1%) Query: 522 DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEF 580 ++ ++ +L+ FF+DR K L ++DI ++++++L +D+ + I + + Sbjct: 10 NVNITNKSLADDLVEFFNDRFKSLLKEKDISFNVVDSVLNNNRSDDFYNLFLKIITIAKC 69 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKK-NREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 +G + + KR IL E I E E+ L+A I++ + Sbjct: 70 IKQPEGINSIAAYKRAKNILEQNEDIIKGNIFGTPDIVLFNSEIEETLFAKINEVKEYFT 129 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + +L + + FF++V VN ++ EV+ NRL LL + + Sbjct: 130 TPSRLRDSKKTIQMLSEVKVITDQFFEEVKVNDENEEVKKNRLELLLLMCKTFDNFTDFS 189 Query: 700 K 700 K Sbjct: 190 K 190 >gi|309810240|ref|ZP_07704085.1| putative glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 2503V10-D] gi|308169512|gb|EFO71560.1| putative glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 2503V10-D] Length = 206 Score = 134 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 20/199 (10%) Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EF ELQG +G YA L E + AI+E P ++P KI +S+ADKLDT Sbjct: 1 MVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPITKIGSLLSIADKLDT 60 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------- 530 +I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 61 IIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDIIALLKGKTVAKLP 120 Query: 531 -----DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + F +R+K L + +D+I+ +L N+ I+ + L E +K Sbjct: 121 NDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILSIADILQENHDDSK 180 Query: 586 GEKFLLSAKRIFQILAIEE 604 +K + S RI IL + Sbjct: 181 FKKVVESLTRIANILKKAD 199 >gi|313608762|gb|EFR84579.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL F2-208] Length = 188 Score = 133 bits (335), Expect = 1e-28, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 75/170 (44%), Gaps = 9/170 (5%) Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 + + F +RL++ L IRHD+I+A++ + + + ++D + LNE + + Sbjct: 25 KEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQLIDRAQILNEHAEAEWFRPTIE 84 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ +I E +E+ P E E+ L+ + +R Sbjct: 85 ALSRVVKIAKKYEDG-----VEVDPALFENEYEQALFDKLEKLKFDYAGLTIIER----L 135 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + I+ +FD LV D+ E+++NRL+LL + + I + +I Sbjct: 136 KAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLFELASFIKEFAQMDEI 185 >gi|315929824|gb|EFV08990.1| glycyl-tRNA synthetase subunit beta domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 151 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 9/153 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ + K+ K +V Sbjct: 60 DKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKARISENELSF--KEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTH 147 +++L +V ++ + + KSMRW Sbjct: 118 IKGLQSQEILGEMVEKFLKSLSFGKSMRWGANS 150 >gi|257464112|ref|ZP_05628495.1| glycyl-tRNA synthetase beta chain [Fusobacterium sp. D12] gi|317061629|ref|ZP_07926114.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. D12] gi|313687305|gb|EFS24140.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. D12] Length = 162 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 67/166 (40%), Gaps = 7/166 (4%) Query: 536 LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKR 595 FF RL ++ + D++ A+L + ++ + ++ L F S + L KR Sbjct: 1 EFFKQRLSNIFSEK-MERDIVAAVLEVQAEDAMDAFTRMQALKVFLSQEGAKDLLELVKR 59 Query: 596 IFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 + I + E++ E EK LY ++ M K Y + Sbjct: 60 VGNISKETKW------TEVNVSLFQQEEEKELYDFTEKAKNEVESLMAAKDYAGYLAAVS 113 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + E + +F+ V V ++ E++ NR+S L + ++ + + + Sbjct: 114 ASKERVTKYFNAVKVMDENEEIQKNRVSQLALLHSLYQKLADFSML 159 >gi|34763773|ref|ZP_00144689.1| Glycyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886449|gb|EAA23708.1| Glycyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 174 Score = 130 bits (326), Expect = 1e-27, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 6/176 (3%) Query: 526 SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + + +++ F R+ D R D+I ++L + DN+ +++++ + E S K Sbjct: 4 DRAKVETDVLDFLKQRIINVFTDMKYRKDVILSVLDKDADNITNALEIVRVITEKLSKDK 63 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 + L + KR+ I+ + + I + + EK LY ++++ K Sbjct: 64 MQALLQAVKRVSNIMKGSK------DVTIKEKLFKNDIEKTLYTESKKVEEEAEKAIKEK 117 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + L ++ I+ +FD V+V +D+ VRDNR+ L YI N+ + + K+ Sbjct: 118 EYADYFEKLFTLVPTIDKYFDTVIVMDEDKSVRDNRIGQLTYIMNLFDRIAYLNKL 173 >gi|309803286|ref|ZP_07697383.1| hypothetical protein HMPREF9214_0412 [Lactobacillus iners LactinV 11V1-d] gi|308164794|gb|EFO67044.1| hypothetical protein HMPREF9214_0412 [Lactobacillus iners LactinV 11V1-d] Length = 108 Score = 128 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 7/101 (6%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTIS 95 + E + GP + G KA +GF+R + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMSVDD 103 >gi|330976410|gb|EGH76466.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 108 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 3/109 (2%) Query: 593 AKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD 652 KR+ +L+ E I+ + P+Y E LY+ I IQ ++Y + Sbjct: 2 NKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADHAIQPMAAERQYSESLA 58 Query: 653 LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ + Sbjct: 59 RLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADISLL 107 >gi|207109522|ref|ZP_03243684.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori HPKX_438_CA4C1] Length = 171 Score = 127 bits (318), Expect = 9e-27, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 16/173 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + + ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEAGTIEVFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAI-DGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCI 165 + + +D++ IV ++ + + KSMRW S+IRP+ +I + Sbjct: 125 IHEK-EPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVL 171 >gi|313888948|ref|ZP_07822608.1| conserved domain protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845121|gb|EFR32522.1| conserved domain protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 105 Score = 120 bits (301), Expect = 9e-25, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 7/96 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EE+P+R + A E L LL E + +++++ Y TP RL L ++GL Sbjct: 1 MNNYLLEIGVEELPSRFVNMAIEQLREKSQKLLVENELGFKDVKVYATPRRLSLIIEGLD 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRST 89 + +E GP + K + GF+ S Sbjct: 61 EKQKDITKEVKGPALKIAYDDEKNPTKPLLGFMNSQ 96 >gi|270700813|ref|ZP_06223055.1| glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae HK1212] gi|270315851|gb|EFA27950.1| glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae HK1212] Length = 163 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 16/153 (10%) Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--------- 532 K DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 9 KFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAALFGDKLA 68 Query: 533 ------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 ++ F R + + D I D+I+A+L ++ ++ F + Sbjct: 69 NQNVVAEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSHFRTLDSA 128 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 E + KR+ ILA + +S ++ ++ Sbjct: 129 EALAAANKRVSNILAKAD-AAIWVSNSVNKRFF 160 >gi|169836489|ref|ZP_02869677.1| Glycyl-tRNA synthetase beta chain [candidate division TM7 single-cell isolate TM7a] Length = 199 Score = 117 bits (292), Expect = 9e-24, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 20/197 (10%) Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 + + +LQG +G YA Q E+ I EH PR + +PT +ADK+DT Sbjct: 1 MEKGITKLQGFMGSVYAQKQGEDKDVALGIFEHYLPRYQGDKLPTTVEGAIAGIADKMDT 60 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------------- 531 +I +A+ KP+ SKDPYALRRAT GII+++L +K+ + IE Sbjct: 61 IIGCFAVGLKPTSSKDPYALRRATQGIIQVVLNSKLSFDYKELIEKAYEIFSADKKVLEK 120 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ FF R+ L ++ + +LI + EN N++ + + L + + E Sbjct: 121 NVVKDVTEFFKQRIINVLSEK-YKKELINYEINLEN-NVVELDKKLSELLKLSQTENFEI 178 Query: 589 FLLSAKRIFQILAIEEK 605 + KR+ IL +K Sbjct: 179 LINLLKRVK-ILLKMKK 194 >gi|973184|gb|AAC44083.1| glycyl tRNA synthetase [Neisseria meningitidis] Length = 87 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 38/85 (44%) Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 L + EK L+A I ++ + L S+ ++ FFD V+V +D Sbjct: 1 SLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAA 60 Query: 677 VRDNRLSLLQYIKNIILIVINVQKI 701 V+ NRL+LL + + V ++ + Sbjct: 61 VKQNRLNLLNRLAEQMNAVADIALL 85 >gi|315282353|ref|ZP_07870782.1| glycyl-tRNA synthetase beta subunit [Listeria marthii FSL S4-120] gi|313614014|gb|EFR87729.1| glycyl-tRNA synthetase beta subunit [Listeria marthii FSL S4-120] Length = 130 Score = 108 bits (270), Expect = 4e-21, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 54/135 (40%), Gaps = 9/135 (6%) Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + ++D + LNE + + + R+ +I E +E+ P E E+ Sbjct: 2 IPQLIDRAQILNEHAEAEWFRPTIEALSRVVKISKKYEDG-----VEVDPALFENEYEQA 56 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L+ + +R + I+ +FD LV D+ E+++NRL+LL Sbjct: 57 LFDKLEKLKFDYAGLTIIER----LKAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLF 112 Query: 687 YIKNIILIVINVQKI 701 + + I + +I Sbjct: 113 ELASFIKEFAQMDEI 127 >gi|325849548|ref|ZP_08170786.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480029|gb|EGC83106.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 124 Score = 108 bits (269), Expect = 4e-21, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 10/127 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI EE P+ + + L L++E + + ++ TP R + L GL Sbjct: 1 MSKYLLEIGVEEFPSAYINSTKKQLEEKFKKLIEENKLSLEEIKVESTPRRFAILLDGLE 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E++ GP G KA+ GFLR KG+ Y+ V Sbjct: 61 ENKSEELISVKGPSKKIAYDNEGNPSKALLGFLRGQKADISDVII---KDFKGEEYVYVE 117 Query: 114 RKPKRLI 120 +K K L+ Sbjct: 118 KKKKALL 124 >gi|167950981|ref|ZP_02538055.1| Glycine--tRNA ligase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 104 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 1 MP---DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M D L E+ +EE+P + ++ L+ + LK G+ + + + P RL + + Sbjct: 1 MAERVDLLFELGTEELPPLALKRLSDALTQEFVAGLKRAGLAHGEVESFAAPRRLAVRIS 60 Query: 58 GLSPHSPEKIEERLGPRV 75 + ++ ER GP V Sbjct: 61 DCASRQADRTIERRGPAV 78 >gi|511453|gb|AAA56913.1| unknown [Coxiella burnetii] Length = 145 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 15/141 (10%) Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 +++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 1 MAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKNNY 60 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 F +RL+ + ++++ + A+L D+ L IK + F Sbjct: 61 AVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPDDPLDFDRRIKAVQHFQ 120 Query: 582 SSAKGEKFLLSAKRIFQILAI 602 + + + + KR+ I Sbjct: 121 TLPEADALAAANKRVSNISKN 141 >gi|1857118|gb|AAB48383.1| glycyl tRNA synthetase [Neisseria meningitidis] Length = 76 Score = 100 bits (249), Expect = 8e-19, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%) Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 +A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 1 FAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNR 60 Query: 688 IKNIILIVINVQKI 701 + + V ++ + Sbjct: 61 LAEQMNAVADIALL 74 >gi|149193981|ref|ZP_01871079.1| Glycine--tRNA ligase [Caminibacter mediatlanticus TB-2] gi|149135934|gb|EDM24412.1| Glycine--tRNA ligase [Caminibacter mediatlanticus TB-2] Length = 109 Score = 100 bits (249), Expect = 8e-19, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 11/109 (10%) Query: 593 AKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD 652 KR+ I+ + ++ ++I + EK LY I K + D Sbjct: 10 LKRVANIVKGFDLED----IKIEENLFKTKEEKELYEAIKKAKEF-------KNIEKKLD 58 Query: 653 LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ I+ FFD VLVNV+D ++R+NR SL+ I L + ++++I Sbjct: 59 YLISLKPLIDKFFDNVLVNVEDEKIRNNRKSLIASIYKEFLDIADIKEI 107 >gi|254994010|ref|ZP_05276200.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL J2-064] Length = 112 Score = 100 bits (249), Expect = 9e-19, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 9/118 (7%) Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + R+ I E +E+ P E E+ L+ + Sbjct: 1 EWFRPTIEALTRVVNISKKYEDG-----VEVDPSLFENEYEQALFDKLEKLKFDFAGLKI 55 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 R + I+ +FD LV D+ E+++NRL+LL + + I + +I Sbjct: 56 VDR----LKAFADLRTTIDAYFDNTLVMTDNDELKNNRLALLFELASFIKEFAQMDEI 109 >gi|167950238|ref|ZP_02537312.1| Glycyl-tRNA synthetase, beta subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 135 Score = 98.2 bits (243), Expect = 4e-18, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 11/128 (8%) Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D ++ KG+ L++ + ++L I A+ ++P PK MRW + + + Sbjct: 1 DQLQRQKSDKGEWLCYQLKETGKSTRNLLPEIAETALARLPIPKRMRWGASEA-----QF 55 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-E 214 +RP+ +L +L +++ L E TYGHRFH P I++ S Y LE Sbjct: 56 VRPVHWLLFLL-----GNEVVPCTLLEAEADRFTYGHRFHHPAAIEINSPAEYADKLETT 110 Query: 215 AMVLLDPE 222 V+ D Sbjct: 111 GYVIADFA 118 >gi|77407410|ref|ZP_00784290.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae H36B] gi|77173980|gb|EAO76969.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae H36B] Length = 89 Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 7/91 (7%) Query: 611 SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 S+ + EK LY I + H D L ++ I FFD +V Sbjct: 3 SVLVDSSLFENNQEKALYQAILSLEL-------TEDMHDNLDKLFALSPIINDFFDNTMV 55 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 DD +++ NRL+LL + V + Sbjct: 56 MTDDEKMKQNRLALLNSLVAKARTVAAFNLL 86 >gi|169837066|ref|ZP_02870254.1| Glycyl-tRNA synthetase beta chain [candidate division TM7 single-cell isolate TM7a] Length = 147 Score = 92.8 bits (229), Expect = 2e-16, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 24/152 (15%) Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGG 315 +VE+ G F+K YL LPE++I +T++T+Q+ F + ++G L+N FI++ N A + Sbjct: 1 MVEYPYAIKGEFNKDYLQLPEDIITITLETHQRYFPVKDKDGKLSNKFIVIRN--APEYS 58 Query: 316 AAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDML 375 + +GN +VV RL DA F+ D L + +L Sbjct: 59 ETVKKGNEKVVEPRLADAKFFFDED--------------------LKGKFADNVEKLK-- 96 Query: 376 DVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 +V F +GT E+V R + + + ++ Sbjct: 97 EVTFQKDMGTIFEKVKRSEKIAEYLISELNLS 128 >gi|77407268|ref|ZP_00784218.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae H36B] gi|77174125|gb|EAO77044.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae H36B] Length = 84 Score = 91.6 bits (226), Expect = 4e-16, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 + EK LY I + H D L ++ I FFD +V D Sbjct: 1 VDSSLFENNQEKALYQAILSLXL-------TEDMHDNLDKLFALSPIINDFFDNTMVMTD 53 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKI 701 D +++ NRL+LL + V + Sbjct: 54 DEKMKQNRLALLNSLVAKARTVAAFNLL 81 >gi|255023134|ref|ZP_05295120.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL J1-208] Length = 97 Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 4/96 (4%) Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 K E +E+ P E E+ L+ + +R + I+ +F Sbjct: 3 KKYEDGVEVDPALFENEYEQALFDKLEKLKLDYAGLTIIER----LKAFADLRTTIDAYF 58 Query: 666 DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D LV D+ E+++NRL+LL + + I + +I Sbjct: 59 DNTLVMSDNDELKNNRLALLFELASFIKEFAQMDEI 94 >gi|218512702|ref|ZP_03509542.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli 8C-3] Length = 113 Score = 88.9 bits (219), Expect = 3e-15, Method: Composition-based stats. Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 1/81 (1%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ-YWTPHRLFLYLKGL 59 MP+ LLE+ SEEIPARMQ KAA D ++ L E + + R YWTP RL L + GL Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDQIFLVTDALVEFLFVLRGPRAPYWTPRRLALDIHGL 60 Query: 60 SPHSPEKIEERLGPRVGAGKK 80 + S + EER GPR A +K Sbjct: 61 TARSADVCEERKGPRTDANEK 81 >gi|145638255|ref|ZP_01793865.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittII] gi|145272584|gb|EDK12491.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittII] Length = 52 Score = 87.8 bits (216), Expect = 5e-15, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 31/49 (63%) Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 1 MDKLANLRMPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 49 >gi|330947682|gb|EGH48185.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. pisi str. 1704B] Length = 123 Score = 87.8 bits (216), Expect = 6e-15, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 15/122 (12%) Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 V +ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 2 VDIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLIETVKFAVTQF 61 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 62 GAKIKPAGLAEQVLEFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAFR 121 Query: 582 SS 583 Sbjct: 122 KL 123 >gi|241563385|ref|XP_002401682.1| hypothetical protein IscW_ISCW020765 [Ixodes scapularis] gi|215501874|gb|EEC11368.1| hypothetical protein IscW_ISCW020765 [Ixodes scapularis] Length = 113 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 26/139 (18%) Query: 330 LEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGER 389 L DAL+F+K+D ++K L+ R+ +L+ V FHA++G E+ Sbjct: 1 LSDALYFYKQD--------------------IAKTLESRLGKLE--AVTFHAELGKLREK 38 Query: 390 VSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENI 449 V RI + K IA + + L K+DL +E+VREFPELQG +G YA + N Sbjct: 39 VERITKICKHIAP----NNKDLITVAKLCKSDLVSEMVREFPELQGIMGYYYAKHEGLNE 94 Query: 450 SCCDAIEEHLKPRGPLENV 468 AI++H KPRG +NV Sbjct: 95 EVATAIKDHYKPRGLNDNV 113 >gi|207110034|ref|ZP_03244196.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori HPKX_438_CA4C1] Length = 134 Score = 79.7 bits (195), Expect = 2e-12, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 16/150 (10%) Query: 324 RVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKI 383 +V+ ARL DA+ F++ D + + L+ L L +M R ++ K Sbjct: 1 KVLKARLSDAVFFYENDLKKPLDNAPLESVVFVQGLG---TLKDKMERESIIAQYLTQKY 57 Query: 384 GTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAV 443 + ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ Sbjct: 58 ISSLN-------------MPLEKALELVKRAVKIAKADLLSEVVYEFSELQGIMGYYYAL 104 Query: 444 LQNENISCCDAIEEHLKPRGPLENVPTNKI 473 QNEN +++E P +P++ Sbjct: 105 KQNENELVALSLKEQYLPASENAPLPSSVF 134 >gi|207108909|ref|ZP_03243071.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori HPKX_438_CA4C1] Length = 100 Score = 79.7 bits (195), Expect = 2e-12, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 5/101 (4%) Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 I + +N S S E L+ + T ES+D K + + P Sbjct: 3 NINKDRNPNESSGFSTSLFKESQEHALFEAFNAIKTSAFESLDSK-----IEAYFGLHAP 57 Query: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +E +F VLV D E++ NR + L + L + ++++I Sbjct: 58 LEEYFKSVLVMDKDIEIQKNRKNFLWGVYQSFLEIGDIKEI 98 >gi|67906600|gb|AAY82704.1| hypothetical protein [uncultured bacterium] Length = 58 Score = 74.3 bits (181), Expect = 7e-11, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%) Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++L + FFD V+VN +D ++ NRL L+Q + +N I Sbjct: 2 KKTLEVLADAKTDVSNFFDNVIVNDEDEAIKKNRLELMQLLCKTFNNYLNFSNI 55 >gi|291533032|emb|CBL06145.1| Glycyl-tRNA synthetase, beta subunit [Megamonas hypermegale ART12/1] Length = 98 Score = 73.5 bits (179), Expect = 1e-10, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M D LLEI +EE+PA L +E + + + TP R L +K Sbjct: 1 MAKDLLLEIGTEEVPAHFMPGILAQLKEKATAKFQEMRLDFDEVTTLGTPRRTALLVK 58 >gi|4140516|gb|AAD04093.1| glycyl-tRNA synthetase [Chlamydia trachomatis] Length = 93 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 3/91 (3%) Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCF 303 + + L++E + L E V FD + LP+EL+ + +Q+ F T+ +G + N F Sbjct: 6 IAPEHLVDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQHQRYFPTQNMQGEITNRF 65 Query: 304 ILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 ++V + +D IV+GN + +A RL D Sbjct: 66 LIVCDNSPTDS---IVEGNEKALAPRLTDGN 93 >gi|167950239|ref|ZP_02537313.1| glycyl-tRNA synthetase subunit beta [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 84 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 43/84 (51%) Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A A+G D+ LL+E+ L EW GSF++++L +P E + LT+K NQK F Sbjct: 1 MQTAQALGGIADLDEALLDEVTALNEWPVPIAGSFEERFLEVPHEALVLTMKKNQKYFPL 60 Query: 293 RTREGVLANCFILVSNIQASDGGA 316 E LA L S I + + Sbjct: 61 FDSEQRLAEPASLPSPISIAPSPS 84 >gi|33322827|gb|AAQ07149.1|AF496459_2 glycyl-tRNA synthetase beta chain [Lactobacillus delbrueckii subsp. lactis] Length = 52 Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHR 51 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y T R Sbjct: 3 KDFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYXTXRR 52 >gi|32401316|gb|AAP80830.1| glycyl-tRNA synthetase beta chain [Griffithsia japonica] Length = 173 Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 72/163 (44%), Gaps = 23/163 (14%) Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ-- 527 ++ V++AD++D+L+ +++ P + DP+ALRRA LG+++ ++ ++ L Sbjct: 5 SSNAGALVAIADRIDSLVGLFSVGLVPKSTADPFALRRAALGVVQTVIAAGYNVDLRDMV 64 Query: 528 ----------------FIEDQNLILFFHDRLKLYLHDR-DIRHDLIEAIL--RPENDNLL 568 ++ F RL+ YL D IR D+++ +L + N++ Sbjct: 65 RISAGSIADQTGKDVPLDVQDAVLEFIAKRLEGYLLDNVGIRDDVVKTVLKVKRNERNVV 124 Query: 569 TIVDLIKHLNEFFSSAKGEK--FLLSAKRIFQILAIEEKKNRE 609 L + ++ + K + + R ++L + + + Sbjct: 125 LARALCETISAMINEDKEKIDMAQEAHSRAARLLNSIKDVSMD 167 >gi|15991371|gb|AAL12837.1|AF355193_1 GlyS [Neisseria meningitidis] gi|15991378|gb|AAL12843.1|AF355194_1 GlyS [Neisseria meningitidis] Length = 40 Score = 67.4 bits (163), Expect = 9e-09, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 22/38 (57%) Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD V+V +D V+ NRL+LL + + V ++ + Sbjct: 1 FFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALL 38 >gi|114778506|ref|ZP_01453350.1| hypothetical protein SPV1_10169 [Mariprofundus ferrooxydans PV-1] gi|114551231|gb|EAU53790.1| hypothetical protein SPV1_10169 [Mariprofundus ferrooxydans PV-1] Length = 75 Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 4/73 (5%) Query: 633 DFGTHIQESMDHKRYHQ----IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++ + +L + EP++ FFD V+V +D VR NRL+LL + Sbjct: 3 SAENDFRAAVSTGDFDSSIVPALSVLARLREPVDSFFDDVMVMAEDERVRGNRLALLARL 62 Query: 689 KNIILIVINVQKI 701 + + L + +V ++ Sbjct: 63 RALFLNLADVSRL 75 >gi|309810171|ref|ZP_07704016.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D] gi|308169443|gb|EFO71491.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D] Length = 72 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 26/57 (45%) Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + + I+ +FD ++ + V+ NRLS L+ I + L ++ K+V Sbjct: 14 DVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKLALEFGDLSKLV 70 >gi|307069662|ref|YP_003878139.1| putative glycyl-tRNA synthetase subunit beta [Candidatus Zinderia insecticola CARI] gi|306482922|gb|ADM89793.1| putative glycyl-tRNA synthetase, beta subunit [Candidatus Zinderia insecticola CARI] Length = 679 Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats. Identities = 102/552 (18%), Positives = 209/552 (37%), Gaps = 65/552 (11%) Query: 152 AFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY--I 209 +IR +K+IL + +KII + + + + K + Y Sbjct: 153 NLFYIRNIKNILILY-----NKKIIPFNNFNLFSNSTIKNIFKKFKYKKKYFIKNSYIYK 207 Query: 210 RDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDK 269 L + ++++ + R+N I + + L+ K ++ +W ++ F++ Sbjct: 208 NKLLKKNIIINNKLRKNIIKRILKIIFKKIILKKKIIKKIILT----SKWPIIYKNYFNR 263 Query: 270 KYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAAR 329 K+L + I I +KCF+ + N F +SNI I+ ++ Sbjct: 264 KFLKI-PIKIIKFIINKKKCFLINKSKNK--NIFFTISNIYKKKN---IIYNYKLLINYL 317 Query: 330 LEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGER 389 L + K+D + K+ + + R+++L + K ++ Sbjct: 318 LLEFFFLIKKDIKINIYKNIKKKFKNIIYFYKLGNIFNNLKRINLLFNNIYKKNFSKKII 377 Query: 390 VSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENI 449 ++ ++ I + E+ +L+ I Y + N++ Sbjct: 378 ININSIIITNIYK--------------------------EYYKLEKYINMYYHINNNKSK 411 Query: 450 SCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRAT 509 E+ P +N+PT KI+I +S+ +K+ +INFW I KP +KDPY ++ T Sbjct: 412 IKSLYSYEYFLPFKKKKNLPTFKITILLSICNKISKIINFWGIGLKPILNKDPYYIKLNT 471 Query: 510 LGIIRIILENKIDIPLSQF-----------IEDQNLIL-----FFHDRLKLYLHDRDIRH 553 + +I++ K I ++ +NL FF + + + Sbjct: 472 KMLFFLIIKKKFKISFTKLIIIYINLFIKNKNFKNLFYEIKFFFFKQIINILKKKYKFKI 531 Query: 554 DLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE 613 + + + L I L + +K +S KR I+ +KKN Sbjct: 532 YFLNFYIYNFYNKLYNIFKLFFFIKNKKKY--LKKIFISNKR---IINFIKKKNIYNLYF 586 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 I +YL + EK LY ++ +I ++ +K I + + I IFF+++L+ Sbjct: 587 IKKKYLKNKYEKLLYNILIIIKKNIFKNNIYK-IKIIFLYYILLSQIINIFFNKILILNK 645 Query: 674 DREVRDNRLSLL 685 ++ NR+ L+ Sbjct: 646 NKIKYKNRILLI 657 >gi|309803155|ref|ZP_07697252.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d] gi|308164663|gb|EFO66913.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d] Length = 45 Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 24/42 (57%) Query: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 I+ +FD ++ + V+ NRLS L+ I + L ++ K+V Sbjct: 2 IDEYFDSNMILDKNEAVKINRLSQLKLIDKLALEFGDLSKLV 43 >gi|315283742|ref|ZP_07871832.1| arginyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313612612|gb|EFR86664.1| arginyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 556 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL ++++ E++ L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRSGKEQDLEVTEAADMSLLQTEAEYDLLKVLGEFADVVAEAAAKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 500 RYLNDLAAAFHRFYNSNKVLDMDNLEVTKARLALIK 535 >gi|313631877|gb|EFR99036.1| arginyl-tRNA synthetase [Listeria seeligeri FSL N1-067] Length = 441 Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++N ++S E L EAE L V+ +F + E+ + H+I Sbjct: 325 AHARISSILRAGKEQNLDVSKEADMSLLQTEAEYDLLKVLGEFADVVAEAAVKRAPHRIV 384 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 385 RYLNDLAAAFHRFYNSNKVLDMDNLEVTKARLALIK 420 >gi|289435829|ref|YP_003465701.1| hypothetical protein lse_2468 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172073|emb|CBH28619.1| argS [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 556 Score = 55.4 bits (132), Expect = 3e-05, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++N ++S E L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRAGKEQNLDVSKEADMSLLQTEAEYDLLKVLGEFADVVAEAAVKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 500 RYLNDLAAAFHRFYNSNKVLDMDNLEVTKARLALIK 535 >gi|313636233|gb|EFS02062.1| arginyl-tRNA synthetase [Listeria seeligeri FSL S4-171] Length = 556 Score = 55.4 bits (132), Expect = 3e-05, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++N ++S E L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRAGKEQNLDVSKEADMSLLQTEAEYDLLKVLGEFADVVAEAAVKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 500 RYLNDLAAAFHRFYNSNKVLDMDNLEVTKARLALIK 535 >gi|16804599|ref|NP_466084.1| arginyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|47097104|ref|ZP_00234673.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|224500484|ref|ZP_03668833.1| arginyl-tRNA synthetase [Listeria monocytogenes Finland 1988] gi|224503648|ref|ZP_03671955.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-561] gi|254829538|ref|ZP_05234225.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|254900987|ref|ZP_05260911.1| arginyl-tRNA synthetase [Listeria monocytogenes J0161] gi|254913799|ref|ZP_05263811.1| arginyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254938188|ref|ZP_05269885.1| arginyl-tRNA synthetase [Listeria monocytogenes F6900] gi|255025720|ref|ZP_05297706.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-003] gi|284802999|ref|YP_003414864.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284996140|ref|YP_003417908.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|21542250|sp|Q8Y493|SYR_LISMO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|16412049|emb|CAD00639.1| arginyl tRNA synthetase [Listeria monocytogenes EGD-e] gi|47014509|gb|EAL05473.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|258601953|gb|EEW15278.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|258610800|gb|EEW23408.1| arginyl-tRNA synthetase [Listeria monocytogenes F6900] gi|284058561|gb|ADB69502.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284061607|gb|ADB72546.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|293591816|gb|EFG00151.1| arginyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 556 Score = 55.4 bits (132), Expect = 4e-05, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ E++ + L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRSGKEQGLEVTKDADMSLLQTEAEYDLLKVLGEFADVVAEAAAKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 500 RYLNDLASAFHRFYNSNKVLDMDNLEVTKARLALIK 535 >gi|254831015|ref|ZP_05235670.1| arginyl-tRNA synthetase [Listeria monocytogenes 10403S] Length = 556 Score = 55.0 bits (131), Expect = 4e-05, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ E++ + L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRSGKEQGLEVTKDADMSLLQTEAEYDLLKVLGEFADVVAEAAAKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 500 RYLNDLATAFHRFYNSNKVLDMDNLEVTKARLALIK 535 >gi|217963335|ref|YP_002349013.1| arginyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|254782969|sp|B8DBE8|SYR_LISMH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|217332605|gb|ACK38399.1| arginyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|307572087|emb|CAR85266.1| argS [Listeria monocytogenes L99] Length = 556 Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ E++ + L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRSGKEQGLEVTKDADMSLLQTEAEYDLLKVLGEFADVVAEAATKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 500 RYLNDLASAFHRFYNSNKVLDMDNLEVTKARLALIK 535 >gi|290892723|ref|ZP_06555715.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|290557783|gb|EFD91305.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] Length = 556 Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ E++ + L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRSGKEQGLEVTKDADMSLLQTEAEYDLLKVLGEFADVVAEAATKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 500 RYLNDLASAFHRFYNSNKVLDMDNLEVTKARLALIK 535 >gi|169837065|ref|ZP_02870253.1| hypothetical protein cdivTM_08178 [candidate division TM7 single-cell isolate TM7a] Length = 79 Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 9/88 (10%) Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 M+W+ F ++RP+K + + +I+ + + + GN T G R+ A I Sbjct: 1 MKWADR-----TFRFVRPIKWFVTLFD----NGEILPFEFEGLKGGNKTRGMRYFASQDI 51 Query: 201 KVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++ + Y + L E V+++ E Sbjct: 52 EIDNPLDYEKILLENFVIVNGEKEERKF 79 >gi|116873927|ref|YP_850708.1| arginyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123461434|sp|A0ALP7|SYR_LISW6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|116742805|emb|CAK21929.1| arginyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 556 Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ E++ + L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRSGKEQGLEVTKDADMSLLQTEAEYDLLKVLGEFADVVAEAAAKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RLSL++ Sbjct: 500 RYLNDLATAFHRFYNSNKVLDMDNLEVTQARLSLIK 535 >gi|299821825|ref|ZP_07053713.1| arginine--tRNA ligase [Listeria grayi DSM 20601] gi|299817490|gb|EFI84726.1| arginine--tRNA ligase [Listeria grayi DSM 20601] Length = 556 Score = 53.9 bits (128), Expect = 9e-05, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 1/97 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL E++ +S + L E E L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRSGEEQGIVVSDGLDVSLLQTETEIDLLKVLGEFSDVVAEAAAKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNVDDRE-VRDNRLSLLQY 687 L+ + F++ V D + RL+L++ Sbjct: 500 RYLNDLASAFHRFYNTNKVLNPDEADISKARLALIKA 536 >gi|270667323|ref|ZP_06222450.1| glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae HK1212] gi|270316821|gb|EFA28555.1| glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae HK1212] Length = 77 Score = 53.9 bits (128), Expect = 9e-05, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 23/67 (34%) Query: 524 PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L+ ++ F R + + D I D+I+A+L ++ ++ + Sbjct: 11 KLANQNVVAEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSHIRTL 70 Query: 584 AKGEKFL 590 E Sbjct: 71 DSAEALA 77 >gi|313622316|gb|EFR92809.1| arginyl-tRNA synthetase [Listeria innocua FSL J1-023] Length = 556 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ E+S + + L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRSGKEQGLEVSKDANMSLLETEAEYDLLKVLGEFADVVAEAAVKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 500 RYLNDLATAFHRFYNSNKVLDMDNLEVTKARLALIK 535 >gi|16801767|ref|NP_472035.1| arginyl-tRNA synthetase [Listeria innocua Clip11262] gi|21542253|sp|Q927T2|SYR_LISIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|16415242|emb|CAC97932.1| arginyl tRNA synthetase [Listeria innocua Clip11262] Length = 556 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ E+S + + L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRSGKEQGLEVSKDANMSLLETEAEYDLLKVLGEFADVVAEAAVKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 500 RYLNDLATAFHRFYNSNKVLDMDNLEVTKARLALIK 535 >gi|313617044|gb|EFR89624.1| arginyl-tRNA synthetase [Listeria innocua FSL S4-378] Length = 556 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ E+S + + L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRSGKEQGLEVSKDANMSLLETEAEYDLLKVLGEFADVVAEAAVKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 500 RYLNDLATAFHRFYNSNKVLDMDNLEVTKARLALIK 535 >gi|47093569|ref|ZP_00231328.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|226225108|ref|YP_002759215.1| arginyl tRNA synthetase [Listeria monocytogenes Clip81459] gi|259511650|sp|C1KYX7|SYR_LISMC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|47018040|gb|EAL08814.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|225877570|emb|CAS06284.1| arginyl tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|328465162|gb|EGF36430.1| arginyl-tRNA synthetase [Listeria monocytogenes 1816] Length = 556 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ E++ + L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRSGKEQGLEVTKDADMSLLQTEAEYDLLKVLGEFADVVAEAATKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 500 RYLNDLASSFHRFYNSNKVLDMDNLEVTKARLALIK 535 >gi|254993097|ref|ZP_05275287.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-064] Length = 556 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ E++ + L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRSGKEQGLEVTKDADMSLLQTEAEYDLLKVLGEFADVVAEAATKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 500 RYLNDLASSFHRFYNSNKVLDMDNLEVTKARLALIK 535 >gi|46908732|ref|YP_015121.1| arginyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|254826340|ref|ZP_05231341.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|254854387|ref|ZP_05243735.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|255519904|ref|ZP_05387141.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-175] gi|300766060|ref|ZP_07076028.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|67461793|sp|Q71WL8|SYR_LISMF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|46882004|gb|AAT05298.1| arginyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|258607786|gb|EEW20394.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|293595581|gb|EFG03342.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|300513206|gb|EFK40285.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] Length = 556 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ E++ + L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRSGKEQGLEVTKDADMSLLQTEAEYDLLKVLGEFADVVAEAATKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 500 RYLNDLASSFHRFYNSNKVLDMDNLEVTKARLALIK 535 >gi|254932197|ref|ZP_05265556.1| arginyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293583753|gb|EFF95785.1| arginyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|328471050|gb|EGF41959.1| arginyl-tRNA synthetase [Listeria monocytogenes 220] gi|332312990|gb|EGJ26085.1| Arginyl-tRNA synthetase [Listeria monocytogenes str. Scott A] Length = 556 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ E++ + L EAE L V+ +F + E+ + H+I Sbjct: 440 AHARISSILRSGKEQGLEVTKDADMSLLQTEAEYDLLKVLGEFADVVAEAATKRAPHRIV 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQ 686 L+ + F++ V D+ EV RL+L++ Sbjct: 500 RYLNDLASSFHRFYNSNKVLDMDNLEVTKARLALIK 535 >gi|294056123|ref|YP_003549781.1| arginyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221] gi|293615456|gb|ADE55611.1| arginyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221] Length = 592 Score = 52.7 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 2/101 (1%) Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L + RI I E SP L +AE L + ++ +++ R H Sbjct: 476 LLYAVARINSIFRKAEMNPDAAISGASP--LETDAELALARKLMGLVNALELTLNDLRPH 533 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + L+ + F++ V VD++++R RL L + Sbjct: 534 FLCTYLYELAGAYSSFYNANKVMVDEQDIRARRLLLCARTR 574 >gi|307546356|ref|YP_003898835.1| arginyl-tRNA synthetase [Halomonas elongata DSM 2581] gi|307218380|emb|CBV43650.1| arginyl-tRNA synthetase [Halomonas elongata DSM 2581] Length = 561 Score = 52.7 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 3/96 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEI---SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + R+ +L + R E+ + L E EK L ++ + ++ + + Sbjct: 443 AHARVCSMLRKAQADERPFDHELAMDNLALLDTEQEKALLNRLARYPEVVERAALAREPQ 502 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 QI L + ++ V V V+D R+ RL+L Sbjct: 503 QIAQYLQDLAAEFHTCYNAVKVMVEDDARRNARLAL 538 >gi|169840228|ref|ZP_02873416.1| Glycyl-tRNA synthetase beta chain [candidate division TM7 single-cell isolate TM7a] Length = 68 Score = 52.3 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 8/70 (11%) Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 ++ + ++ +GP V G KA +GF+RS G I+ + KG Sbjct: 1 MAEKQDDLDKKSVGPSVEIAYKDGQLTKAGEGFVRSQGATADDIKIIENE--KGKYISIE 58 Query: 113 LRKPKRLIED 122 + + Sbjct: 59 KFIAGKDTRE 68 >gi|304440484|ref|ZP_07400371.1| arginine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370962|gb|EFM24581.1| arginine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 569 Score = 52.3 bits (124), Expect = 3e-04, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 48/98 (48%) Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 +I ++ EK +I+ E+ L E E + + F ++++ + I + Sbjct: 459 ARICSLLEKGGFDINKEVDSSLLNNEMEINILRNLYKFTEVVEDAKEKYEPFFISRYVVE 518 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + +++QV +NV+D ++++ RL L +KN+I Sbjct: 519 LAKDFNKYYNQVTINVEDEKLKNTRLMLCYSVKNVISE 556 >gi|296134410|ref|YP_003641657.1| arginyl-tRNA synthetase [Thermincola sp. JR] gi|296032988|gb|ADG83756.1| arginyl-tRNA synthetase [Thermincola potens JR] Length = 561 Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 2/102 (1%) Query: 592 SAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + RI I ++ + I+P L AE L ++DF T + E+ + H+ Sbjct: 444 AHARICSIFRQVQESGISVPSARNINPAVLKQAAELELLRKLADFPTEVAEAAVNLEPHR 503 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + LH + F++ V ++D+++RD RL L++ ++ + Sbjct: 504 MARYLHELAGIFHSFYNSNRVMIEDKDIRDARLVLVKSVQQV 545 >gi|313887918|ref|ZP_07821597.1| arginine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846084|gb|EFR33466.1| arginine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 569 Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 49/96 (51%) Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 +I ++ +K + +I+ EI P L E+E + + +F + ++ + + I Sbjct: 459 ARICSLLKKGDFDINNEIDPSLLTEESEINIIRSLYNFTDVVVDACEKYEPYFITRYTVE 518 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + F++Q + VDD ++++ RL L +KN+I Sbjct: 519 LAKNFNKFYNQTQILVDDEKLKNTRLMLCYAVKNVI 554 >gi|213423816|ref|ZP_03356796.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 55 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILI 30 M + FL+EI +EE+P + AE + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFT 32 >gi|298673986|ref|YP_003725736.1| arginyl-tRNA synthetase [Methanohalobium evestigatum Z-7303] gi|298286974|gb|ADI72940.1| arginyl-tRNA synthetase [Methanohalobium evestigatum Z-7303] Length = 563 Score = 50.0 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 2/91 (2%) Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 R IL E ++P L+ + E L ++ F I +S + H + Sbjct: 451 RACNILKKAETF-WNPEDAVNPSVLVEDDEVALIKKMAKFDQMIDQSAKELKPHTVATYA 509 Query: 655 HSICEPIEIFFDQVLVN-VDDREVRDNRLSL 684 + + F+ V VN +D EVR+ RL L Sbjct: 510 RELADDFNQFYRYVPVNSAEDDEVRNARLGL 540 >gi|109894992|sp|Q2J9H6|SYR_FRASC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 588 Score = 49.6 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 4/107 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ + L AE+ L + FG + E H++ Sbjct: 477 AHTRIQSILRKA----GDMTATVDVALALHPAERALALQLDAFGGALTEVARLLEPHRLC 532 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + L+ + F++ V D R NRL+L + +++ Sbjct: 533 NYLYELARAFTDFYEACPVLQADPSTRANRLALCHLTARTLRQGLDL 579 >gi|86741395|ref|YP_481795.1| arginyl-tRNA synthetase [Frankia sp. CcI3] gi|86568257|gb|ABD12066.1| arginyl-tRNA synthetase [Frankia sp. CcI3] Length = 598 Score = 49.6 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 4/107 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ + L AE+ L + FG + E H++ Sbjct: 487 AHTRIQSILRKA----GDMTATVDVALALHPAERALALQLDAFGGALTEVARLLEPHRLC 542 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + L+ + F++ V D R NRL+L + +++ Sbjct: 543 NYLYELARAFTDFYEACPVLQADPSTRANRLALCHLTARTLRQGLDL 589 >gi|325291383|ref|YP_004267564.1| arginyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324966784|gb|ADY57563.1| arginyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 561 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 3/107 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEISP---QYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + R+ IL E++ +E L + E L ++D I + H Sbjct: 443 AHARLCSILRQAEEQGFAHEVEPDIKQISLLASQEECDLLKKLADLPGEIALAARMTEPH 502 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + + F++ V VDD ++R RL+L++ I+ ++ V Sbjct: 503 RLARYVMELAGLFHSFYNSHRVLVDDADLRTARLALIRAIRQVLANV 549 >gi|309813013|ref|ZP_07706741.1| arginine--tRNA ligase [Dermacoccus sp. Ellin185] gi|308433085|gb|EFP56989.1| arginine--tRNA ligase [Dermacoccus sp. Ellin185] Length = 594 Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 8/105 (7%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 +A RI ILA + + EI+ L +AE+ L + D+G + + H++ Sbjct: 481 AATRIRSILARAAEAGYSPAAEIT---LGEDAERALALKLLDYGAVVAAVGESLEPHRLA 537 Query: 652 DLLHSICEPIEIFFDQVLVN-VDDREVRDNRLSLLQYIKNIILIV 695 L + F+++ V DD +VR +RL+L + L V Sbjct: 538 GYLFELATTFTAFYEKCPVLKADDDDVRASRLAL----CELTLGV 578 >gi|260655517|ref|ZP_05861005.1| arginine--tRNA ligase [Jonquetella anthropi E3_33 E1] gi|260629965|gb|EEX48159.1| arginine--tRNA ligase [Jonquetella anthropi E3_33 E1] Length = 561 Score = 47.7 bits (112), Expect = 0.007, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 46/105 (43%), Gaps = 2/105 (1%) Query: 592 SAKRIFQILAIEEKKNREIS--LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + RI + ++KN +++ L + + EKRL + F ++ + H Sbjct: 444 AYARIASLTRKAQEKNIDMTKPLPFDGRLMTSPEEKRLLTALETFPGELERAAAGLEPHL 503 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + +H + F++ + +D +R + L+L+Q ++ ++ Sbjct: 504 LVTYVHELSGHFHAFYNSCRILDEDEPLRSSHLALVQAVRTVLKN 548 >gi|323342451|ref|ZP_08082683.1| arginine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463563|gb|EFY08757.1| arginine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 546 Score = 47.7 bits (112), Expect = 0.007, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISP-QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + RI IL + + L E L I++F + + ++ + H+I Sbjct: 434 AHARICSILRQAGEV-----PHVDVIDQLTNPKEIALLKEINEFSSVVADAAKKREVHKI 488 Query: 651 GDLLHSICEPIEIFFDQVLVNVD-DREVRDNRLSLLQYIKNIILIVINV 698 + + + F+ +V V + E++ RL+LL +K + +N+ Sbjct: 489 ANYVQDLASSFHSFYGEVKVMDPSNPELQAQRLNLLVAVKITLSNALNL 537 >gi|297585470|ref|YP_003701250.1| arginyl-tRNA synthetase [Bacillus selenitireducens MLS10] gi|297143927|gb|ADI00685.1| arginyl-tRNA synthetase [Bacillus selenitireducens MLS10] Length = 555 Score = 47.3 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 45/103 (43%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI ++ ++K E L E E L + +F + ++ + H+I Sbjct: 440 AHARICSMIRQAKEKGFEPDPSADLTKLTSEKEHDLMKKLGEFPEAVADAASRRLPHRIT 499 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + +H + + + F++ V DD + RL+L++ ++ + Sbjct: 500 NYVHELAQALHSFYNADKVITDDEALTKARLALVEAVRITLRN 542 >gi|289207432|ref|YP_003459498.1| arginyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] gi|288943063|gb|ADC70762.1| arginyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] Length = 587 Score = 47.3 bits (111), Expect = 0.010, Method: Composition-based stats. Identities = 68/424 (16%), Positives = 115/424 (27%), Gaps = 60/424 (14%) Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVA------ARLEDALHFWKRDQNNL 344 V G + V+ + G V + V D + Sbjct: 191 VPFPTNGYQGDYIYPVAESLTAQIGEQAVHPATAVTRDLPPDEPAGGDKEVYIDAVIARA 250 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 L + F+ L+ L+ L V + + S + Q Sbjct: 251 RELLGPELYRTVFDCGLNAILEDIRDDLREFGVEYQCWFSERSLADSGAIDAAVQDLQAH 310 Query: 405 DADVALVDRAIVLSKAD-------LCTEIVREFPELQGKIGKEYAVLQNENISCCDAI-E 456 A + D A+ D + ++ I Q + Sbjct: 311 GA-LYEQDGALWFRSTDYGDDKDRVVRRENGDYTYFASDIAYHREKFQRGFERVINIWGA 369 Query: 457 EH--LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 +H PR AD+LD L+ +AI + G + P + R +R Sbjct: 370 DHHGYVPRVRAALQALGLE------ADRLDVLLVQFAILYR-GGERLPMSTRAGQFVTLR 422 Query: 515 IILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 L + F+ R D+ + DL A NDN + + Sbjct: 423 E---------LRDEVGSDAARFFYVQR----RCDQHLDFDLDLA-KSQSNDNPMYYIQYA 468 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY---LLLEAEKRLYAVI 631 RI +L ++ S L E L + Sbjct: 469 HA------------------RIASVLRTAAERGHTASALDDTGLSACLTEPQEDDLLDRL 510 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQV-LVNVDDREVRDNRLSLLQYIKN 690 F I + + HQI L + +++ V +N +D V RL+LL IK Sbjct: 511 DRFPEVIAAAAEACEPHQIAQYLRELAAGFHTYYNAVPFLNAEDATVIGARLALLTGIKQ 570 Query: 691 IILI 694 ++ Sbjct: 571 VLHN 574 >gi|254432045|ref|ZP_05045748.1| arginyl-tRNA synthetase [Cyanobium sp. PCC 7001] gi|197626498|gb|EDY39057.1| arginyl-tRNA synthetase [Cyanobium sp. PCC 7001] Length = 604 Score = 46.9 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 2/96 (2%) Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L + RI I + E ++E S E L + F + E + + Sbjct: 488 LLYAVVRIAGIARKG--GDLEGAVEASSLRFSEPQEWALARELLKFDAVVAEVEEELLPN 545 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 ++ L + + F+DQV V + EVR RL+L Sbjct: 546 RLCSYLFELSQVFNRFYDQVPVLKAEPEVRAARLAL 581 >gi|299143915|ref|ZP_07036995.1| arginine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518400|gb|EFI42139.1| arginine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 569 Score = 46.9 bits (110), Expect = 0.011, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 44/98 (44%) Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 +I ++ EK N + + + L L+ E L I F + ++ + + I + Sbjct: 459 ARICSLLEKGNFDKENKFNASLLTLDEELNLLRTIYKFTDVVIDAHEKYEPYFITRYVVE 518 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + +++ V V+D E+++ RL L +K +I Sbjct: 519 LAKLFNKYYNSTQVIVEDEELKNARLMLCYAVKTVIKE 556 >gi|261252368|ref|ZP_05944941.1| arginyl-tRNA synthetase [Vibrio orientalis CIP 102891] gi|260935759|gb|EEX91748.1| arginyl-tRNA synthetase [Vibrio orientalis CIP 102891] Length = 577 Score = 46.9 bits (110), Expect = 0.011, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 4/94 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A ++ EI E EK L A + F +Q + H + Sbjct: 464 AYTRVSSIFAKAGISMDNLAGEIKV---TEEKEKALIAKLLQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L + F++ + N +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILNTEDESVKQSRLKL 554 >gi|152980236|ref|YP_001351803.1| arginyl-tRNA synthetase [Janthinobacterium sp. Marseille] gi|166232796|sp|A6SU56|SYR_JANMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|151280313|gb|ABR88723.1| arginyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 577 Score = 46.9 bits (110), Expect = 0.012, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 46/103 (44%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI +LA + ++ L E L A ++++ +Q++++ HQ+ Sbjct: 462 AHARICSVLAQWTDGDEASLDKVDLSPLTAARETALLAKLAEYPETLQKALEELGPHQVA 521 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 L + + +++ V VDD ++ R++L+ + ++ Sbjct: 522 FYLRDLAGELHSYYNAERVLVDDEALKMARIALMSATRQVLRN 564 >gi|73668541|ref|YP_304556.1| arginyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] gi|109895000|sp|Q46DR6|SYR_METBF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|72395703|gb|AAZ69976.1| arginyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] Length = 569 Score = 46.9 bits (110), Expect = 0.012, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 4/95 (4%) Query: 595 RIFQILAIE-EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 R IL E+ S EI P L+ + E L ++ F I + + H + Sbjct: 455 RACSILEKAKEEAAWNSSAEIDPSLLVEDTEIDLIKKMASFDRVIDLAARELKPHVLAIY 514 Query: 654 LHSICEPIEIF--FDQVLVNVDDREVRDNRLSLLQ 686 + + F F V + +D +VR +RL+L+ Sbjct: 515 ARELADAFNQFYRFVPV-IAAEDEKVRASRLALVN 548 >gi|21227450|ref|NP_633372.1| arginyl-tRNA synthetase [Methanosarcina mazei Go1] gi|23822188|sp|Q8PX74|SYR_METMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|20905820|gb|AAM31044.1| Arginyl-tRNA synthetase [Methanosarcina mazei Go1] Length = 569 Score = 46.9 bits (110), Expect = 0.012, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 52/180 (28%), Gaps = 28/180 (15%) Query: 523 IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAI-LRPENDNLLTIVDLIKHLNEFF 581 I + F + + + + EA+ L +++ + + + Sbjct: 377 ISADDLFDRVTGAAFEQVETRRPETSYEFKKQVAEAVGLGAVRYDIVRVSPEKSTVFNWK 436 Query: 582 SSAKGEK-----FLLSAKRIFQILAIE-EKKNREISLEISPQYLLLEAEKRLYAVIS--- 632 + EK S R IL E+ EI P L+ ++E L ++ Sbjct: 437 EALDFEKQGAPYIQYSHARACSILEKAKEEAAWNPDKEIDPSLLVEDSEIDLIKKMAMFD 496 Query: 633 --------DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + H+ + + + I +D VR RL+L Sbjct: 497 SVIDLGARELKPHVLAIYARE-LADAFNQFYRFVPVIA---------AEDENVRAARLAL 546 >gi|89101282|ref|ZP_01174100.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89084002|gb|EAR63185.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 556 Score = 46.9 bits (110), Expect = 0.012, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 1/104 (0%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL E++ +S + + E E L + +F + E+ + + H+I Sbjct: 440 AHARISSILRQGEEQGMALSADADFSLISAEKEIDLLKKLGEFPQAVAEAAEKRMPHRIT 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQYIKNIILI 694 + + + F++ V D+ E RL L++ ++ + Sbjct: 500 NYIFELASAFHSFYNAEKVLDSDNPEKTKARLGLIKAVQTALRN 543 >gi|328473382|gb|EGF44230.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 10329] Length = 577 Score = 46.9 bits (110), Expect = 0.013, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A E+ +I + E EK L A + F +Q + H + Sbjct: 464 AYTRVASIFAKAGVAMDELQGDIQ---ITDEKEKALIAKLLQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILV-AEDEAVKQSRLKL 554 >gi|260901277|ref|ZP_05909672.1| arginine--tRNA ligase [Vibrio parahaemolyticus AQ4037] gi|308109838|gb|EFO47378.1| arginine--tRNA ligase [Vibrio parahaemolyticus AQ4037] Length = 577 Score = 46.9 bits (110), Expect = 0.013, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A E+ +I + E EK L A + F +Q + H + Sbjct: 464 AYTRVASIFAKAGVAMDELQGDIQ---ITDEKEKALIAKLLQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILV-AEDEAVKQSRLKL 554 >gi|28897635|ref|NP_797240.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|153838587|ref|ZP_01991254.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] gi|260365999|ref|ZP_05778484.1| arginine--tRNA ligase [Vibrio parahaemolyticus K5030] gi|260878212|ref|ZP_05890567.1| arginine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|260895648|ref|ZP_05904144.1| arginine--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|31076998|sp|Q87RD6|SYR_VIBPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|28805847|dbj|BAC59124.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|149748005|gb|EDM58864.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] gi|308088188|gb|EFO37883.1| arginine--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|308090109|gb|EFO39804.1| arginine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|308111274|gb|EFO48814.1| arginine--tRNA ligase [Vibrio parahaemolyticus K5030] Length = 577 Score = 46.9 bits (110), Expect = 0.013, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A E+ +I + E EK L A + F +Q + H + Sbjct: 464 AYTRVASIFAKAGVAMDELQGDIQ---ITDEKEKALIAKLLQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILV-AEDEAVKQSRLKL 554 >gi|311896747|dbj|BAJ29155.1| putative arginyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 587 Score = 46.9 bits (110), Expect = 0.013, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 3/108 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ +L + + + E+ P L AE+ L + FG ++E D H++ Sbjct: 473 AHARLRTLLGKAQAVD--PAPEVDPGLPLEPAERALILQLEGFGQVLREVADEAEPHRLA 530 Query: 652 DLLHSICEPIEIFFDQVLVN-VDDREVRDNRLSLLQYIKNIILIVINV 698 L ++ + + F+ V D R NRL+L + + + +++ Sbjct: 531 GYLFALAKALTEFYGSCPVLKADTPARRANRLALCRLTADTLAQGLDL 578 >gi|322367961|ref|ZP_08042530.1| arginyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] gi|320551977|gb|EFW93622.1| arginyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] Length = 583 Score = 46.6 bits (109), Expect = 0.014, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 4/97 (4%) Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 ILA + + EI +I P L E+E+ L VI+ F I+E+ D H + Sbjct: 477 ILA---EGDGEIPTDIDPSLLDSESERDLIEVIARFPNVIEEAADDLEPHAVATYTREFA 533 Query: 659 EPIEIFFDQVLVN-VDDREVRDNRLSLLQYIKNIILI 694 E F+ + V +D EVRD RL+L+ K+ I Sbjct: 534 ETFNAFYRECPVLTAEDEEVRDARLALVAAAKHTIAN 570 >gi|254506840|ref|ZP_05118979.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 16] gi|219550125|gb|EED27111.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 16] Length = 605 Score = 46.6 bits (109), Expect = 0.015, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 4/94 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A ++ EI E EK L A + F +Q + H + Sbjct: 492 AYTRVSSIFAKAGISMDNLAGEIKV---TEEKEKALIAKLLQFEEAVQSVAREGQPHIMC 548 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L + F++ + N +D V+ +RL L Sbjct: 549 SYLFELAGQFSSFYEACPILNTEDESVKQSRLKL 582 >gi|23006400|ref|ZP_00048737.1| COG0751: Glycyl-tRNA synthetase, beta subunit [Magnetospirillum magnetotacticum MS-1] Length = 53 Score = 46.6 bits (109), Expect = 0.015, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 14/26 (53%) Query: 651 GDLLHSICEPIEIFFDQVLVNVDDRE 676 L + P++ FF++V VN DD Sbjct: 1 MRALSRLRAPVDAFFEKVTVNADDPA 26 >gi|86147649|ref|ZP_01065958.1| arginyl-tRNA synthetase [Vibrio sp. MED222] gi|218710198|ref|YP_002417819.1| arginyl-tRNA synthetase [Vibrio splendidus LGP32] gi|254782991|sp|B7VI24|SYR_VIBSL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|85834560|gb|EAQ52709.1| arginyl-tRNA synthetase [Vibrio sp. MED222] gi|218323217|emb|CAV19394.1| Arginyl-tRNA synthetase [Vibrio splendidus LGP32] Length = 577 Score = 46.6 bits (109), Expect = 0.015, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A + EI + E EK L A + F +Q + H + Sbjct: 464 AYTRVASIFAKAGISMDSLEGEIK---ITEEKEKALIAKLLQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILV-AEDETVKQSRLKL 554 >gi|327399125|ref|YP_004339994.1| Arginyl-tRNA synthetase [Hippea maritima DSM 10411] gi|327181754|gb|AEA33935.1| Arginyl-tRNA synthetase [Hippea maritima DSM 10411] Length = 543 Score = 46.6 bits (109), Expect = 0.016, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 5/110 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL E+ N EI L P L + E L + F ++++ + I Sbjct: 431 AHARINSIL---EQLNSEIDLNADPSCLKEKEEIELIKSVIKFKELLEKAFLETEPYFIV 487 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + E + F+++ V +D+ E++ R+ LL ++ IL + + I Sbjct: 488 KGLLEVAEKLHRFYNKHRVIIDNEELKKARV-LLVWVVKEILKIG-LSLI 535 >gi|260767651|ref|ZP_05876586.1| arginyl-tRNA synthetase [Vibrio furnissii CIP 102972] gi|260617160|gb|EEX42344.1| arginyl-tRNA synthetase [Vibrio furnissii CIP 102972] Length = 577 Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A ++ +I + E EK L A + F +Q + H + Sbjct: 464 AYTRVASIFAKAGVSPDNLTGDIK---ITEEKEKALIAKLLQFEEAVQSVSREGQPHILC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +L+ +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILI-AEDESVKQSRLKL 554 >gi|110803183|ref|YP_698948.1| arginyl-tRNA synthetase [Clostridium perfringens SM101] gi|110683684|gb|ABG87054.1| arginine--tRNA ligase [Clostridium perfringens SM101] Length = 565 Score = 46.2 bits (108), Expect = 0.019, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 3/104 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 S R IL E +EI+ E L + E L + + +D + Sbjct: 451 SYARAKSILRKAE--EQEITAEPDFTKLTSKEEFELAKTLEGLQKAVILGIDKLEPSVVT 508 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSLLQYIKNIILI 694 + + F++ V NV+D ++ RL L++ +I Sbjct: 509 RYSIEVAKAFNKFYNNHTVLNVEDEGLKAARLELIKATAQVIKN 552 >gi|315179517|gb|ADT86431.1| arginyl-tRNA synthetase [Vibrio furnissii NCTC 11218] Length = 577 Score = 46.2 bits (108), Expect = 0.020, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A ++ +I + E EK L A + F +Q + H + Sbjct: 464 AYTRVASIFAKAGVSPDNLTGDIK---ITEEKEKALIAKLLQFEEAVQSVSREGQPHILC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +L+ +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILI-AEDESVKQSRLKL 554 >gi|209695554|ref|YP_002263483.1| arginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] gi|238065084|sp|B6EI57|SYR_ALISL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|208009506|emb|CAQ79795.1| arginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] Length = 577 Score = 46.2 bits (108), Expect = 0.021, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 58/181 (32%), Gaps = 20/181 (11%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA---KGEKF 589 +L+ R + +++ E + L++ ++ + Sbjct: 393 DLLDEAEQRAIALIEEKNKDLSTEE--KAKIATTVAMAAVKYSDLSKHRTTDYIFDWDNI 450 Query: 590 LL-----------SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 L + R+ I + + ++ E+ + E EK L + F + Sbjct: 451 LAFEGNTAPYMQYAYTRVASIFSKADLSMDNLAGEVK---ITDEKEKALITKLMQFEEAV 507 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSLLQYIKNIILIVIN 697 Q + H + L + F++ + N DD ++ +RL L I ++ Sbjct: 508 QAVASEGQPHLMCAYLFELAGQFSSFYEACPILNNDDESIKQSRLKLAALTAKTIKQGLD 567 Query: 698 V 698 + Sbjct: 568 L 568 >gi|257066823|ref|YP_003153079.1| arginyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] gi|256798703|gb|ACV29358.1| arginyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] Length = 565 Score = 46.2 bits (108), Expect = 0.021, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R +L + K + EIS + + E L + +F + ++ + I Sbjct: 453 TYARAKSVLRKADFKE---NTEISFDNITSDEEFALVKALGNFKDVVAKAAEKYEPSLIT 509 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L I + F++ +NV+D ++++ RL+L Sbjct: 510 RHLTEIAKNFNKFYNACQINVEDEKIKEERLAL 542 >gi|147679179|ref|YP_001213394.1| arginyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] gi|146275276|dbj|BAF61025.1| arginyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] Length = 565 Score = 46.2 bits (108), Expect = 0.021, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 2/105 (1%) Query: 592 SAKRIFQILAIEEKKNREISL--EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + RI IL E++ E+ ++ L E E L ++DF + + + Sbjct: 448 AHARISSILRQLEERGEEVPDPSQVDYSLLKEEQELALARKLADFPEEVSSAARGLAPQR 507 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I LH + + F++ V DRE+ RL L+ + + Sbjct: 508 IARYLHELAGLLHSFYNSHRVITSDRELSRARLVLVSATRITLRN 552 >gi|331001441|ref|ZP_08325059.1| arginine--tRNA ligase [Parasutterella excrementihominis YIT 11859] gi|329568170|gb|EGG49987.1| arginine--tRNA ligase [Parasutterella excrementihominis YIT 11859] Length = 581 Score = 46.2 bits (108), Expect = 0.022, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 5/108 (4%) Query: 592 SAKRIFQILAIEEKKNREIS-----LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + RI + A ++K E+ L E RL + +SDF T + + Sbjct: 450 AHARICSVFAQAQEKGIEVPSVEEMASEDLSSLTAPTELRLMSKLSDFPTALANGTEDLS 509 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + L + F++ V VDD ++R+ RL+LL + ++ Sbjct: 510 PLALVTYLKELAADFHSFYNAERVLVDDEKLRNARLALLVATRQVLRN 557 >gi|303256429|ref|ZP_07342443.1| arginine--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|302859920|gb|EFL82997.1| arginine--tRNA ligase [Burkholderiales bacterium 1_1_47] Length = 581 Score = 46.2 bits (108), Expect = 0.022, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 5/108 (4%) Query: 592 SAKRIFQILAIEEKKNREIS-----LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + RI + A ++K E+ L E RL + +SDF T + + Sbjct: 450 AHARICSVFAQAQEKGIEVPSVEEMASEDLSSLTAPTELRLMSKLSDFPTALANGTEDLS 509 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + L + F++ V VDD ++R+ RL+LL + ++ Sbjct: 510 PLALVTYLKELAADFHSFYNAERVLVDDEKLRNARLALLVATRQVLRN 557 >gi|84393465|ref|ZP_00992221.1| arginyl-tRNA synthetase [Vibrio splendidus 12B01] gi|84375893|gb|EAP92784.1| arginyl-tRNA synthetase [Vibrio splendidus 12B01] Length = 577 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A + +I + E EK L A + F +Q + H + Sbjct: 464 AYTRVASIFAKAGISMDSLEGDIK---ITEEKEKALIAKLLQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILV-AEDETVKQSRLKL 554 >gi|134093383|ref|YP_001098458.1| arginyl-tRNA synthetase [Herminiimonas arsenicoxydans] gi|166232794|sp|A4G1E2|SYR_HERAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|133737286|emb|CAL60329.1| putative arginyl-tRNA synthetase (ArgS) [Herminiimonas arsenicoxydans] Length = 577 Score = 45.8 bits (107), Expect = 0.024, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 46/103 (44%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI +LA + L++ L E L A ++++ +Q +++ HQ+ Sbjct: 462 AHARICSVLAQWTDGDEAALLDVDLSPLTAPREAALLAKLAEYPEALQRALEELGPHQVA 521 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 L + + +++ V VDD ++ RL+L+ + ++ Sbjct: 522 FYLRDLAAELHSYYNAERVLVDDVALKMARLTLMHATRQVLRN 564 >gi|269967949|ref|ZP_06181989.1| Arginyl-tRNA synthetase [Vibrio alginolyticus 40B] gi|269827472|gb|EEZ81766.1| Arginyl-tRNA synthetase [Vibrio alginolyticus 40B] Length = 577 Score = 45.8 bits (107), Expect = 0.027, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A + +I + E EK L A + F +Q + H + Sbjct: 464 AYTRVASIFAKAGVAMDALQGDIK---ITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILV-AEDEAVKQSRLKL 554 >gi|254229698|ref|ZP_04923107.1| arginyl-tRNA synthetase [Vibrio sp. Ex25] gi|151937743|gb|EDN56592.1| arginyl-tRNA synthetase [Vibrio sp. Ex25] Length = 545 Score = 45.8 bits (107), Expect = 0.027, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A + +I + E EK L A + F +Q + H + Sbjct: 432 AYTRVASIFAKAGVAMDALQGDIK---ITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 488 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 489 SYLFELAGQFSSFYEACPILV-AEDEAVKQSRLKL 522 >gi|91228441|ref|ZP_01262366.1| arginyl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|91188025|gb|EAS74332.1| arginyl-tRNA synthetase [Vibrio alginolyticus 12G01] Length = 577 Score = 45.8 bits (107), Expect = 0.028, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A + +I + E EK L A + F +Q + H + Sbjct: 464 AYTRVASIFAKAGVAMDALQGDIK---ITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILV-AEDEAVKQSRLKL 554 >gi|262394871|ref|YP_003286725.1| arginyl-tRNA synthetase [Vibrio sp. Ex25] gi|262338465|gb|ACY52260.1| arginyl-tRNA synthetase [Vibrio sp. Ex25] Length = 577 Score = 45.8 bits (107), Expect = 0.028, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A + +I + E EK L A + F +Q + H + Sbjct: 464 AYTRVASIFAKAGVAMDALQGDIK---ITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILV-AEDEAVKQSRLKL 554 >gi|168211451|ref|ZP_02637076.1| arginyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|170710582|gb|EDT22764.1| arginyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] Length = 565 Score = 45.8 bits (107), Expect = 0.029, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 3/104 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 S R IL E++N I+ E L + E L + + +D + Sbjct: 451 SYARAKSILRKAEEQN--ITAEPDFTKLTSKEEFELAKTLEGLQKAVILGIDKLEPSVVT 508 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSLLQYIKNIILI 694 + + F++ V NV+D ++ RL L++ +I Sbjct: 509 RYSIEVAKAFNKFYNNHTVLNVEDEGLKAARLELIKATAQVIKN 552 >gi|168207505|ref|ZP_02633510.1| arginyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|168216948|ref|ZP_02642573.1| arginyl-tRNA synthetase [Clostridium perfringens NCTC 8239] gi|170661125|gb|EDT13808.1| arginyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|182380942|gb|EDT78421.1| arginyl-tRNA synthetase [Clostridium perfringens NCTC 8239] Length = 565 Score = 45.8 bits (107), Expect = 0.029, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 3/104 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 S R IL E++N I+ E L + E L + + +D + Sbjct: 451 SYARAKSILRKAEEQN--ITAEPDFTKLTSKEEFELAKTLEGLQKAVILGIDKLEPSVVT 508 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSLLQYIKNIILI 694 + + F++ V NV+D ++ RL L++ +I Sbjct: 509 RYSIEVAKAFNKFYNNHTVLNVEDEGLKAARLELIKATAQVIKN 552 >gi|169342733|ref|ZP_02863774.1| arginyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|169299239|gb|EDS81309.1| arginyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] Length = 565 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 3/104 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 S R IL E++N I+ E L + E L + + +D + Sbjct: 451 SYARAKSILRKAEEQN--ITAEPDFTKLTSKEEFELAKTLEGLQKAVILGIDKLEPSVVT 508 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSLLQYIKNIILI 694 + + F++ V NV+D ++ RL L++ +I Sbjct: 509 RYSIEVAKAFNKFYNNHTVLNVEDEGLKAARLELIKATAQVIKN 552 >gi|110798607|ref|YP_696348.1| arginyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|110673254|gb|ABG82241.1| arginyl-tRNA synthetase [Clostridium perfringens ATCC 13124] Length = 565 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 3/104 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 S R IL E++N I+ E L + E L + + +D + Sbjct: 451 SYARAKSILRKAEEQN--ITAEPDFTKLTSKEEFELAKTLEGLQKAVILGIDKLEPSVVT 508 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSLLQYIKNIILI 694 + + F++ V NV+D ++ RL L++ +I Sbjct: 509 RYSIEVAKAFNKFYNNHTVLNVEDEGLKAARLELIKATAQVIKN 552 >gi|168214506|ref|ZP_02640131.1| arginyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|170714040|gb|EDT26222.1| arginyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] Length = 565 Score = 45.4 bits (106), Expect = 0.038, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 3/104 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 S R IL E++N I+ E L + E L + + +D + Sbjct: 451 SYARAKSILRKAEEQN--ITAEPDFTKLTSKEEFELAKTLDGLQKAVVLGIDKLEPSVVT 508 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSLLQYIKNIILI 694 + + F++ V NV+D ++ RL L++ +I Sbjct: 509 RYSIEVAKAFNKFYNNHTVLNVEDEGLKAARLELIKATAQVIKN 552 >gi|323499566|ref|ZP_08104536.1| arginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] gi|323315439|gb|EGA68480.1| arginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] Length = 577 Score = 45.0 bits (105), Expect = 0.038, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 4/94 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A +++ +I E EK L A + F + + H + Sbjct: 464 AYTRVSSIFAKAGISVDQLAGDIKV---TEEKEKALIAKLLQFEEAVLSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L + F++ + N +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILNSEDESVKQSRLKL 554 >gi|18310643|ref|NP_562577.1| arginyl-tRNA synthetase [Clostridium perfringens str. 13] gi|23822195|sp|Q8XJU2|SYR_CLOPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|18145324|dbj|BAB81367.1| arginine-tRNA ligase [Clostridium perfringens str. 13] Length = 565 Score = 45.0 bits (105), Expect = 0.038, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 3/104 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 S R IL E ++I+ E L + E L + + +D + Sbjct: 451 SYARAKSILRKAE--EQKITAEPDFTKLTSKEEFELAKTLEGLQKAVILGIDKLEPSVVT 508 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSLLQYIKNIILI 694 + + F++ V NV+D ++ RL L++ +I Sbjct: 509 RYSIEVAKAFNKFYNNHTVLNVEDEGLKAARLELIKATAQVIKN 552 >gi|261884528|ref|ZP_06008567.1| glycyl-tRNA synthetase subunit beta [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 43 Score = 45.0 bits (105), Expect = 0.041, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ 41 L+EI EE+PA + ++ +L E G+ + Sbjct: 3 LLIEIGVEELPAIPFLRELNNIKPKWKQVLDEYGLDSK 40 >gi|23100470|ref|NP_693937.1| arginyl-tRNA synthetase [Oceanobacillus iheyensis HTE831] gi|38372527|sp|Q8EM45|SYR_OCEIH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|22778703|dbj|BAC14971.1| arginine-tRNA ligase [Oceanobacillus iheyensis HTE831] Length = 556 Score = 45.0 bits (105), Expect = 0.043, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 41/104 (39%), Gaps = 1/104 (0%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI +L+ + K E L E E L I + I ++ D H++ Sbjct: 440 AHARICTMLSQAKSKGFNTEAEFDASLLTAEKELDLLKKIGELPQMIVDAADKHTPHKVT 499 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRD-NRLSLLQYIKNIILI 694 + + + F++ V D E R R++L++ ++ + Sbjct: 500 QYIFELATLLHSFYNAEKVLDADNEARTHARIALMKAVRQTLAN 543 >gi|323493320|ref|ZP_08098443.1| arginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] gi|323312406|gb|EGA65547.1| arginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] Length = 577 Score = 45.0 bits (105), Expect = 0.045, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 4/94 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A ++ EI E EK L A + F +Q + H + Sbjct: 464 AYTRVSSIFAKAGISMDNLTGEIKV---TDEKEKALIAKLLQFDEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L + F++ + N +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILNTEDETVKQSRLKL 554 >gi|149191128|ref|ZP_01869387.1| arginyl-tRNA synthetase [Vibrio shilonii AK1] gi|148835056|gb|EDL52034.1| arginyl-tRNA synthetase [Vibrio shilonii AK1] Length = 577 Score = 45.0 bits (105), Expect = 0.046, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A E+S +I + E EK L A + F +Q + H + Sbjct: 464 AYTRVASIFAKAGVSMDELSGDIK---ITDEKEKALVAKLLQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +L+ +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILI-AEDESVKQSRLKL 554 >gi|197334256|ref|YP_002155601.1| arginyl-tRNA synthetase [Vibrio fischeri MJ11] gi|238690276|sp|B5FC42|SYR_VIBFM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|197315746|gb|ACH65193.1| arginyl-tRNA synthetase [Vibrio fischeri MJ11] Length = 577 Score = 44.6 bits (104), Expect = 0.055, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 4/94 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I + E++ E+ + E EK L A + F +Q + H + Sbjct: 464 AYTRVASIFSKAGLSMDELTGEVK---ITDEKEKALVAKLMQFEEAVQAVASEGQPHLMC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L + F++ + N +D V+ +RL L Sbjct: 521 AYLFELAGQFSSFYEACPILNNEDDAVKQSRLKL 554 >gi|92112735|ref|YP_572663.1| arginyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] gi|123265793|sp|Q1QZZ4|SYR_CHRSD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91795825|gb|ABE57964.1| arginyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] Length = 561 Score = 44.6 bits (104), Expect = 0.056, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 30/66 (45%) Query: 619 LLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 L EK L ++ + ++ + + Q+ L + ++ V V V+D E+R Sbjct: 473 LDAPQEKELMNRLARYPEVVERAARMREPQQVAQYLMDLAADFHTCYNAVKVMVEDDELR 532 Query: 679 DNRLSL 684 + RL+L Sbjct: 533 NARLAL 538 >gi|59711446|ref|YP_204222.1| arginyl-tRNA synthetase [Vibrio fischeri ES114] gi|75354336|sp|Q5E6L2|SYR_VIBF1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|59479547|gb|AAW85334.1| arginyl-tRNA synthetase [Vibrio fischeri ES114] Length = 577 Score = 44.6 bits (104), Expect = 0.056, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 4/94 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I + E++ E+ + E EK L A + F +Q + H + Sbjct: 464 AYTRVASIFSKAGLSMDELTGEVK---ITDEKEKALVAKLMQFEEAVQAVASEGQPHLMC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L + F++ + N +D V+ +RL L Sbjct: 521 AYLFELAGQFSSFYEACPILNNEDDAVKQSRLKL 554 >gi|260776440|ref|ZP_05885335.1| arginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260607663|gb|EEX33928.1| arginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 577 Score = 44.6 bits (104), Expect = 0.056, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 4/94 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A E++ +I + E EK L A + F +Q + H + Sbjct: 464 AYTRVASIFAKAGISMDELAGDIQ---ITEEKEKSLIAKLLQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L + F++ + N +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILNTEDESVKQSRLKL 554 >gi|37679228|ref|NP_933837.1| arginyl-tRNA synthetase [Vibrio vulnificus YJ016] gi|39932019|sp|Q7MMM3|SYR_VIBVY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|37197971|dbj|BAC93808.1| arginyl-tRNA synthetase [Vibrio vulnificus YJ016] Length = 577 Score = 44.6 bits (104), Expect = 0.057, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ + A ++ EI + E EK L A + F +Q + H + Sbjct: 464 AYTRVASVFAKAGVSMDDLQGEIK---ITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILV-AEDEAVKQSRLKL 554 >gi|148243340|ref|YP_001228497.1| arginyl-tRNA synthetase [Synechococcus sp. RCC307] gi|166228634|sp|A5GW85|SYR_SYNR3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|147851650|emb|CAK29144.1| Arginyl-tRNA synthetase [Synechococcus sp. RCC307] Length = 590 Score = 44.6 bits (104), Expect = 0.063, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 3/96 (3%) Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L + RI I + E+ + E L + I E + Sbjct: 475 LLYAVVRISGIARKGGALDGELPERL---VFEEPQEWALIRQLLQLDAVISEVESDLLPN 531 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 ++ L + + F+DQV V D +R +RL+L Sbjct: 532 RLCTYLFELSQSFNRFYDQVPVLKADEPMRSSRLAL 567 >gi|27363628|ref|NP_759156.1| arginyl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|31077005|sp|Q8DFR1|SYR_VIBVU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|27359744|gb|AAO08683.1| arginyl-tRNA synthetase [Vibrio vulnificus CMCP6] Length = 577 Score = 44.6 bits (104), Expect = 0.063, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ + A ++ EI + E EK L A + F +Q + H + Sbjct: 464 AYTRVASVFAKAGVSMDDLQGEIK---ITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILV-AEDEAVKQSRLKL 554 >gi|320157028|ref|YP_004189407.1| arginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] gi|319932340|gb|ADV87204.1| arginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] Length = 577 Score = 44.3 bits (103), Expect = 0.066, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ + A ++ EI + E EK L A + F +Q + H + Sbjct: 464 AYTRVASVFAKAGVSMDDLQGEIK---ITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILV-AEDEAVKQSRLKL 554 >gi|284048956|ref|YP_003399295.1| arginyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] gi|283953177|gb|ADB47980.1| arginyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] Length = 552 Score = 44.3 bits (103), Expect = 0.066, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 43/102 (42%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL E++ + + L E L ++D+ I+ + + H+I Sbjct: 437 AHARICSILRQMEEEKIALRKDCDLSVLKEPIEVDLIKKLNDYEELIETAAAERAPHKIA 496 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ + F++Q V D V+ RL+L+ + N + Sbjct: 497 HYVYDLAGLFHSFYNQCRVLGVDPAVQQARLALITAVGNTLR 538 >gi|269960720|ref|ZP_06175092.1| Arginyl-tRNA synthetase [Vibrio harveyi 1DA3] gi|269834797|gb|EEZ88884.1| Arginyl-tRNA synthetase [Vibrio harveyi 1DA3] Length = 577 Score = 44.3 bits (103), Expect = 0.069, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ + A ++ EI + E EK L A + F +Q + H + Sbjct: 464 AYTRVASVFAKAGVSMDDLQGEIK---ITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILV-AEDEAVKQSRLKL 554 >gi|312882113|ref|ZP_07741863.1| arginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309370249|gb|EFP97751.1| arginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 577 Score = 44.3 bits (103), Expect = 0.071, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 4/108 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I A E + +I ++ E EK L + F ++ H + Sbjct: 464 AYTRVASIFAKAEISMDSLQGDIK---IVDEKEKALITKLLQFEEAVKAVASEGLPHVLC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSLLQYIKNIILIVINV 698 L + F++ + N +D ++ +RL L I +++ Sbjct: 521 TYLFELAGQFSSFYEACPILNNEDESIKQSRLKLAALTAKTIKQGLDL 568 >gi|156973665|ref|YP_001444572.1| arginyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116] gi|166200586|sp|A7MT26|SYR_VIBHB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|156525259|gb|ABU70345.1| hypothetical protein VIBHAR_01368 [Vibrio harveyi ATCC BAA-1116] Length = 577 Score = 44.3 bits (103), Expect = 0.073, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ + A ++ EI + E EK L A + F +Q + H + Sbjct: 464 AYTRVASVFAKAGVSMDDLQGEIK---ITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILV-AEDEAVKQSRLKL 554 >gi|229593427|ref|YP_002875546.1| hypothetical protein PFLU6063 [Pseudomonas fluorescens SBW25] gi|229365293|emb|CAY53636.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 1559 Score = 44.3 bits (103), Expect = 0.076, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 95/320 (29%), Gaps = 47/320 (14%) Query: 363 KPLDQRMARLDMLDVV-FHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 + L Q+ RL + ++ + +++ + + + + I A A S Sbjct: 942 RRLRQKGQRLKPPKIKDLREQLNSFDKQLMQRHSELEALREAIAATPEDAQEAARTS--- 998 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 A N D LK ++ VP + L + Sbjct: 999 ------------------YLAQADNHIKEL-DVTISQLKSLKIIDTVPNYLDGMYEYLTN 1039 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDR 541 ++ + AINE+ G + R+ G + + +PLS + + + +R Sbjct: 1040 QIFVARS--AINEQLDGFQ---QQLRSVEGHMDPDDDTLATLPLSTYQKVYEVTQDMIER 1094 Query: 542 LKLY------LHDRDIRHDLIEAILRPENDNLLTIVDLI--KHLNEFF--SSAKGEKFLL 591 L + + R N+ L+ F + K E Sbjct: 1095 LTFIETPLREMRELGERGVRFATTHGLGLANVSLTDLKAFKISLSTFLCLNETKTESLPA 1154 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH-----KR 646 + + + +I+ E + + + + P+ + +L + + Sbjct: 1155 AREAVARIIETAELAVQSLRVALDPE--NEATQDQLIETLDSLVDQFASVDQNLVELPAD 1212 Query: 647 YHQIGDL--LHSICEPIEIF 664 + L ++ + I+ F Sbjct: 1213 FPDDLQKTPLANLRKQIDEF 1232 >gi|83591226|ref|YP_431235.1| arginyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] gi|109895003|sp|Q2RFU7|SYR_MOOTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|83574140|gb|ABC20692.1| arginyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] Length = 560 Score = 44.3 bits (103), Expect = 0.084, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 2/106 (1%) Query: 592 SAKRIFQILAIEEKKNREISL--EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + RI IL + + + E+ E + L AE L I+ + + + H+ Sbjct: 443 AHARICSILRLAKDRGLEVPPAREARLELLQDPAELELIKQIAAWPDTVAGAAQALEPHR 502 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + H + F+ V DD EVR RL L++ + + V Sbjct: 503 LTRFAHDLASLFHSFYTSCRVLADDPEVRKARLVLVEATRITLRNV 548 >gi|325849255|ref|ZP_08170691.1| arginine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480199|gb|EGC83267.1| arginine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 568 Score = 43.9 bits (102), Expect = 0.089, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 3/93 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 S R +L + N + ++ L + E L +++F I + + I Sbjct: 456 SYARAKSVLKKGQIDNFD---KVEFDLLNTDEEFNLIKSLAEFKESIVRAKEKYEPSIIS 512 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + I + F++ + VDD ++++ RL+L Sbjct: 513 RKVMDIAKNFNKFYNTSKIMVDDEKLKEQRLAL 545 >gi|212697346|ref|ZP_03305474.1| hypothetical protein ANHYDRO_01915 [Anaerococcus hydrogenalis DSM 7454] gi|212675795|gb|EEB35402.1| hypothetical protein ANHYDRO_01915 [Anaerococcus hydrogenalis DSM 7454] Length = 535 Score = 43.9 bits (102), Expect = 0.089, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 3/93 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 S R +L + N + ++ L + E L +++F I + + I Sbjct: 423 SYARAKSVLKKGQIDNFD---KVEFDLLNTDEEFNLIKSLAEFKESIVRAKEKYEPSIIS 479 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + I + F++ + VDD ++++ RL+L Sbjct: 480 RKVMDIAKNFNKFYNTSKIMVDDEKLKEQRLAL 512 >gi|87300835|ref|ZP_01083677.1| arginyl-tRNA synthetase [Synechococcus sp. WH 5701] gi|87284706|gb|EAQ76658.1| arginyl-tRNA synthetase [Synechococcus sp. WH 5701] Length = 610 Score = 43.9 bits (102), Expect = 0.091, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 5/100 (5%) Query: 589 FLLSAKRIFQILAIEEKKNREISLE---ISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 L + RI I E P E L + T I E + Sbjct: 489 LLYALVRIAGIARKGGVGAGEGDAAGVFPDPLVFSEPQEWALARQLLALDTVIAEVEEEL 548 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVN-VDDREVRDNRLSL 684 +++ L + + F+DQV V D+ R +RL+L Sbjct: 549 LPNRLCSYLFELSQVFNRFYDQVPVLKADEPA-RGSRLAL 587 >gi|282865622|ref|ZP_06274673.1| arginyl-tRNA synthetase [Streptomyces sp. ACTE] gi|282559666|gb|EFB65217.1| arginyl-tRNA synthetase [Streptomyces sp. ACTE] Length = 606 Score = 43.9 bits (102), Expect = 0.098, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL + + P+ L AE+ L + FG + E + H++ Sbjct: 493 AYARIRSILRKA----GDANPAAHPELELAPAERALGLHLDQFGAVLSEVAEGYEPHKLA 548 Query: 652 DLLHSICEPIEIFFDQVLVNVDD--REVRDNRLSL 684 L+ + + F+DQ V DD EV +NRL L Sbjct: 549 AYLYQLASHLTTFYDQCQVLSDDNPAEVVENRLFL 583 >gi|254429152|ref|ZP_05042859.1| arginyl-tRNA synthetase [Alcanivorax sp. DG881] gi|196195321|gb|EDX90280.1| arginyl-tRNA synthetase [Alcanivorax sp. DG881] Length = 584 Score = 43.9 bits (102), Expect = 0.100, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 4/97 (4%) Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L + R+ + E+ +S + L +AE+ L A + F +Q D + H Sbjct: 468 LLYAYTRVASVFRKAERDMASVSGDF---LLNEDAEQALAARLVQFAEVLQNVADKGQPH 524 Query: 649 QIGDLLHSICEPIEIFFDQVLVN-VDDREVRDNRLSL 684 + L+ + F++ + +D +R++RL L Sbjct: 525 LLSTYLYDVAGLFSSFYEHCPILSSEDEGIRNSRLKL 561 >gi|119715977|ref|YP_922942.1| arginyl-tRNA synthetase [Nocardioides sp. JS614] gi|119536638|gb|ABL81255.1| arginyl-tRNA synthetase [Nocardioides sp. JS614] Length = 522 Score = 43.9 bits (102), Expect = 0.10, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 44/112 (39%), Gaps = 5/112 (4%) Query: 592 SAKRIFQILAIEEKKNREIS-LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + RI IL E S + P L E L +++F + + + + H++ Sbjct: 402 AHARIASILRNAEDLGIAWSTGDFDPALLSHPKEGELLRALAEFPRVVAAAAELREPHRV 461 Query: 651 GDLLHSICEPIEIFFDQ--VLVNVDDRE--VRDNRLSLLQYIKNIILIVINV 698 L + F+D VL D++ + RL L+ + ++ +++ Sbjct: 462 ARYLEDMAGVYHRFYDNCRVLPMGDEQAGDLHRARLVLVAATRTVLANGLDL 513 >gi|163802523|ref|ZP_02196415.1| arginyl-tRNA synthetase [Vibrio sp. AND4] gi|159173606|gb|EDP58425.1| arginyl-tRNA synthetase [Vibrio sp. AND4] Length = 577 Score = 43.5 bits (101), Expect = 0.12, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ + A ++ EI E EK L A + F +Q + H + Sbjct: 464 AYTRVASVFAKAGVSMDDLRGEIKV---TDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +LV +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILV-AEDESVKQSRLKL 554 >gi|315304822|ref|ZP_07874977.1| arginyl-tRNA synthetase [Listeria ivanovii FSL F6-596] gi|313626812|gb|EFR95790.1| arginyl-tRNA synthetase [Listeria ivanovii FSL F6-596] Length = 109 Score = 43.5 bits (101), Expect = 0.12, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 1/87 (1%) Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 +++N ++S + L EAE L V+ +F + E+ + H+I L+ + Sbjct: 2 RSGKEQNLDVSKDADMSLLQTEAEYDLLKVLGEFADVVAEAAVKRAPHRIVRYLNDLASA 61 Query: 661 IEIFFDQVLVNV-DDREVRDNRLSLLQ 686 F++ V D+ EV RL+L++ Sbjct: 62 FHRFYNSNKVLDMDNLEVTKARLALIK 88 >gi|225620694|ref|YP_002721952.1| arginyl-tRNA synthease [Brachyspira hyodysenteriae WA1] gi|254782945|sp|C0R2B0|SYR_BRAHW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|225215514|gb|ACN84248.1| arginyl-tRNA synthease [Brachyspira hyodysenteriae WA1] Length = 534 Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 2/109 (1%) Query: 592 SAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + RI I E+KN + + E+ +L +I F I E+ + Sbjct: 413 AYARICNIFFKLEEKNMSYDDNKPLDISKIANESSLKLAKMILRFPDEIYEAAKSLEVYT 472 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + + I + F+ +V ++ E+R RL+L++ +K I+ + ++ Sbjct: 473 LINYTYEIASALHRFYYDNIVLEENAEIRQERLTLIKAVKKILGLCFDI 521 >gi|148978252|ref|ZP_01814770.1| arginyl-tRNA synthetase [Vibrionales bacterium SWAT-3] gi|145962553|gb|EDK27830.1| arginyl-tRNA synthetase [Vibrionales bacterium SWAT-3] Length = 577 Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ + A + EI + E EK L A + F +Q + H + Sbjct: 464 AYTRVASVFAKAGVSMDSLEGEIK---ITEEKEKALIAKLLQFEEAVQSVAREGQPHIMC 520 Query: 652 DLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSL 684 L + F++ +L+ +D V+ +RL L Sbjct: 521 SYLFELAGQFSSFYEACPILI-AEDEAVKQSRLKL 554 >gi|330501487|ref|YP_004378356.1| arginyl-tRNA synthetase [Pseudomonas mendocina NK-01] gi|328915773|gb|AEB56604.1| arginyl-tRNA synthetase [Pseudomonas mendocina NK-01] Length = 579 Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 4/97 (4%) Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L + R+ I K EI +I+ L+ + E+ L ++ F + D H Sbjct: 463 LLYAYTRVASIFRKLGKGVDEIGGQIT---LVADQEQALAGKLAQFNELLGNVADKGTPH 519 Query: 649 QIGDLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSL 684 + L+ I F++ + +D R++RL L Sbjct: 520 MLCAYLYDIAGLFSSFYENCPILAAEDEATRNSRLRL 556 >gi|283778010|ref|YP_003368765.1| arginyl-tRNA synthetase [Pirellula staleyi DSM 6068] gi|283436463|gb|ADB14905.1| arginyl-tRNA synthetase [Pirellula staleyi DSM 6068] Length = 651 Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 1/94 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 S R+ I + + + L AE+ L + F + E++ H + Sbjct: 535 SYARVRSIFSRGNIDIAALRTSGALIALTEPAERALGLSLLRFEEALAEAVATAMPHHLT 594 Query: 652 DLLHSICEPIEIFFDQVLVN-VDDREVRDNRLSL 684 L + + FF+ V DD +++RL L Sbjct: 595 TYLFDLAKSYSTFFENCKVLKADDEATKNSRLLL 628 >gi|85059226|ref|YP_454928.1| arginyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans'] gi|109895037|sp|Q2NTK2|SYR_SODGM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|84779746|dbj|BAE74523.1| arginyl-tRNA synthase [Sodalis glossinidius str. 'morsitans'] Length = 576 Score = 43.1 bits (100), Expect = 0.15, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 36/94 (38%), Gaps = 4/94 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I + ++++ +I L E E +L + I H + Sbjct: 463 AYTRVASIFKRSGQDEQQLTGDI---RLEAEQETQLAVRLLQLEEAIATVARDGTPHVLC 519 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N ++ +R +RL L Sbjct: 520 AYLYDLAVLFSAFYEHCPILNAENAALRQSRLQL 553 >gi|268609113|ref|ZP_06142840.1| arginyl-tRNA synthetase [Ruminococcus flavefaciens FD-1] Length = 588 Score = 43.1 bits (100), Expect = 0.16, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 37/106 (34%), Gaps = 3/106 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI +L ++ ++ + L E L ++ + + +I Sbjct: 472 AHARICSMLRALAEEGTQVPEKADLSVLTDSREIELIRHLASLPKEVDLAAKTYDPAKIT 531 Query: 652 DLLHSICEPIEIFFD--QVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + F+D V N + E+++ RL L ++ + V Sbjct: 532 KYAVDLATLFHRFYDACSVK-NAETEELKNARLLLCVAVRQTLRNV 576 >gi|54297958|ref|YP_124327.1| arginyl-tRNA synthetase [Legionella pneumophila str. Paris] gi|81370250|sp|Q5X3M1|SYR_LEGPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|53751743|emb|CAH13165.1| arginine tRNA synthetase [Legionella pneumophila str. Paris] Length = 589 Score = 43.1 bits (100), Expect = 0.17, Method: Composition-based stats. Identities = 59/445 (13%), Positives = 125/445 (28%), Gaps = 73/445 (16%) Query: 270 KYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVA-- 327 +YL L E I F T +G ++ S+ G V VV Sbjct: 185 RYLELAGEPI---------VFPTNGYKGQ---YVYEIAQEMWSEQGNQFVHPWISVVENL 232 Query: 328 ----ARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKI 383 D + +L A L LD L V F Sbjct: 233 PADEPEGGDKETYIDAIIARAQSLLGKDGFANFHQHALKTVLDDIKDDLQAFGVRF---- 288 Query: 384 GTQGERVSRIRVLGKKIAQLIDADVALV--DRAIVLSKAD--------LCTEIVREFPEL 433 + S + D + +A + + Sbjct: 289 DSWFSEQSLFEDGSIEKGIQALKDRGHTYEREGALWFRATDFGDEKDRVLVRANGQTTYF 348 Query: 434 QGKIGKEYAVLQNENISCCDAI-EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 + + D +H + + LD ++ +AI Sbjct: 349 ASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRI----KTAVKALGHDESALDVILVQFAI 404 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIR 552 + G + + R + +R + E + + F+ R ++ + Sbjct: 405 LYR-GGDRVQMSTRSGSFVTLRELREE---------VGNDAARYFYVAR----KPEQHMD 450 Query: 553 HDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 DL A +DN + + RI +L +++ + Sbjct: 451 FDLDLA-KSESSDNPVYYIQYAHA------------------RICSVLRQLKERGLKWDK 491 Query: 613 EI---SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 ++ + L + E L ++I+ + IQ + HQ+ L + + +++ + Sbjct: 492 DMGLKNLDLLEQQHETTLISLIARYPEVIQSAAASCEPHQLAYYLRELANGLHSYYNAIQ 551 Query: 670 VNVDDREVRDNRLSLLQYIKNIILI 694 + + ++R RL LL+ ++ ++ Sbjct: 552 LLCEQEQLRCARLCLLESVRQVLNN 576 >gi|291300762|ref|YP_003512040.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] gi|290569982|gb|ADD42947.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] Length = 570 Score = 43.1 bits (100), Expect = 0.17, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 4/94 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL K + AE+ L + D+ + ++++ H++ Sbjct: 457 AHTRIASILR---KSPTGTHAAVHVDLPPHPAERVLALHLDDYSRVLADTVEQLEPHRVA 513 Query: 652 DLLHSICEPIEIFFDQVLVN-VDDREVRDNRLSL 684 L + + F++ V D VR NRL+L Sbjct: 514 TYLFELAKLFSAFYENCPVLSAADSAVRGNRLAL 547 >gi|78357338|ref|YP_388787.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|109894988|sp|Q30Z04|SYR_DESDG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|78219743|gb|ABB39092.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 551 Score = 42.7 bits (99), Expect = 0.19, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 42/112 (37%), Gaps = 6/112 (5%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDFGTHIQESMDHKRYH 648 + RI +L ++ + L E + ++ F ++ + H Sbjct: 432 AHARICSVLRKAAERGTTPETHSDEELLKPLVHADEIDMLRLVDRFEDTVEAAATSLSVH 491 Query: 649 QIGDLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 I L + + F+ VL N D ++ RL+LL+ + ++ +++ Sbjct: 492 HISYYLQELASALHRFYANHPVL-NAPDEQILKARLALLRAVAQVLRNGLDL 542 >gi|256810399|ref|YP_003127768.1| arginyl-tRNA synthetase [Methanocaldococcus fervens AG86] gi|256793599|gb|ACV24268.1| arginyl-tRNA synthetase [Methanocaldococcus fervens AG86] Length = 566 Score = 42.7 bits (99), Expect = 0.20, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 10/101 (9%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYL---LLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + R IL EKK + L EK L ++ +F I+ES ++++ H Sbjct: 451 AHARCCSILKEAEKKGVK-----DEALFDYELTNEEKELIKMLDEFKDMIKESAENRKVH 505 Query: 649 QIGDLLHSICEPIEIFFDQVLV-NVD-DREVRDNRLSLLQY 687 + + L + + F+ + D ++ +RL L++ Sbjct: 506 VLANYLLELAKVFNRFYANCPILMTKVDDNIKKSRLKLVKS 546 >gi|161723314|ref|NP_245488.2| arginyl-tRNA synthetase [Pasteurella multocida subsp. multocida str. Pm70] Length = 577 Score = 42.7 bits (99), Expect = 0.20, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 3/94 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I E +++S SP L E E+ L + F IQ H + Sbjct: 463 AYTRIRSIFNRSELNEQDLSE--SPVVLSNEKERLLAIKLLQFEEAIQIVAKEGTPHVLC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N +D +++ +RL L Sbjct: 521 TYLYELAGVFSSFYEHCPILNNEDEQIKRSRLKL 554 >gi|13431882|sp|P57851|SYR_PASMU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|12720817|gb|AAK02635.1| ArgS [Pasteurella multocida subsp. multocida str. Pm70] Length = 563 Score = 42.7 bits (99), Expect = 0.21, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 3/94 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I E +++S SP L E E+ L + F IQ H + Sbjct: 449 AYTRIRSIFNRSELNEQDLSE--SPVVLSNEKERLLAIKLLQFEEAIQIVAKEGTPHVLC 506 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N +D +++ +RL L Sbjct: 507 TYLYELAGVFSSFYEHCPILNNEDEQIKRSRLKL 540 >gi|253989980|ref|YP_003041336.1| arginyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211639039|emb|CAR67652.1| arginyl-trna synthetase (ec 6.1.1.19) (arginine--trna ligase) (argrs) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781430|emb|CAQ84593.1| arginyl-tRNA synthetase [Photorhabdus asymbiotica] Length = 576 Score = 42.7 bits (99), Expect = 0.22, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 4/94 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I ++L + L E E+ L + F I H + Sbjct: 463 AYTRVTSIFKRAGIDENSLTLPV---ILNEEREQALATRLLQFEETITTVAREGTPHVMC 519 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N + +R +RL L Sbjct: 520 AYLYDLAGLFSGFYEHCQILNAESEALRQSRLKL 553 >gi|254388302|ref|ZP_05003537.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294814347|ref|ZP_06772990.1| Arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|326442738|ref|ZP_08217472.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|197702024|gb|EDY47836.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294326946|gb|EFG08589.1| Arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 587 Score = 42.7 bits (99), Expect = 0.24, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 6/96 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I ++K E+ + P+ L AE+ L + F I E H++ Sbjct: 474 AYARIQSI----KRKAGEVRPKAHPELALAPAERALGLHLDQFAETIAEVAAAYEPHKLA 529 Query: 652 DLLHSICEPIEIFFDQVLVN-VDD-REVRDNRLSLL 685 L+ + + F+DQ V ++ EV +NRL L+ Sbjct: 530 AYLYQLASHLTRFYDQCQVLSAENPPEVVENRLFLI 565 >gi|291557256|emb|CBL34373.1| arginyl-tRNA synthetase [Eubacterium siraeum V10Sc8a] Length = 584 Score = 42.7 bits (99), Expect = 0.24, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 1/108 (0%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQY-LLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + RI IL E++ S + AE L I+ I E+ +I Sbjct: 468 AHARICSILRRMEEEGTGYSNIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKI 527 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L + + F+D + ++ + +RLSL K + ++++ Sbjct: 528 TKYLCDLAQLFHKFYDNCKIKGEEENILQSRLSLCVATKTVFKNLLDL 575 >gi|291530393|emb|CBK95978.1| arginyl-tRNA synthetase [Eubacterium siraeum 70/3] Length = 584 Score = 42.7 bits (99), Expect = 0.25, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 1/108 (0%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQY-LLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + RI IL E++ S + AE L I+ I E+ +I Sbjct: 468 AHARICSILRRMEEEGTGYSNIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKI 527 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L + + F+D + ++ + +RLSL K + ++++ Sbjct: 528 TKYLCDLAQLFHKFYDNCKIKGEEENILQSRLSLCVATKTVFKNLLDL 575 >gi|167749948|ref|ZP_02422075.1| hypothetical protein EUBSIR_00916 [Eubacterium siraeum DSM 15702] gi|167657115|gb|EDS01245.1| hypothetical protein EUBSIR_00916 [Eubacterium siraeum DSM 15702] Length = 584 Score = 42.7 bits (99), Expect = 0.25, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 1/108 (0%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQY-LLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + RI IL E++ S + AE L I+ I E+ +I Sbjct: 468 AHARICSILRRMEEEGTGYSNIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKI 527 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L + + F+D + ++ + +RLSL K + ++++ Sbjct: 528 TKYLCDLAQLFHKFYDNCKIKGEEENILQSRLSLCVATKTVFKNLLDL 575 >gi|296126409|ref|YP_003633661.1| arginyl-tRNA synthetase [Brachyspira murdochii DSM 12563] gi|296018225|gb|ADG71462.1| arginyl-tRNA synthetase [Brachyspira murdochii DSM 12563] Length = 529 Score = 42.3 bits (98), Expect = 0.26, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 47/109 (43%), Gaps = 2/109 (1%) Query: 592 SAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + R+ I E+KN + E+ +L +I F + ES + Sbjct: 408 AYARVCNIFFKMEEKNMSYDDAKPFDISKIANESSLKLAKIILRFPDEVYESAKSLEVYT 467 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + + I + F+ +V ++ E+R RL+L++ +K ++ + ++ Sbjct: 468 LINYTYEIASALHKFYYDNIVLEENAEIRQERLTLVKAVKKVLGLCFDI 516 >gi|148359603|ref|YP_001250810.1| arginyl tRNA synthetase [Legionella pneumophila str. Corby] gi|296107645|ref|YP_003619346.1| arginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] gi|226701418|sp|A5IDL4|SYR_LEGPC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148281376|gb|ABQ55464.1| arginyl tRNA synthetase [Legionella pneumophila str. Corby] gi|295649547|gb|ADG25394.1| arginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] Length = 586 Score = 42.3 bits (98), Expect = 0.27, Method: Composition-based stats. Identities = 52/423 (12%), Positives = 116/423 (27%), Gaps = 61/423 (14%) Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVA------ARLEDALHFWKRDQNNLP 345 G ++ S+ G V VV D + Sbjct: 192 VFPANGYKGQYVYEIAQEMWSEQGNQFVHPWISVVENLPADEPEGGDKETYIDAIIARAQ 251 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 +L A L LD L V F + S + Sbjct: 252 SLLGKDGFANFHQHALKTVLDDIKDDLQAFGVRF----DSWFSEQSLFEDGSIEKGIQAL 307 Query: 406 ADVALV--DRAIVLSKAD--------LCTEIVREFPELQGKIGKEYAVLQNENISCCDAI 455 D + +A + + + + D Sbjct: 308 KDRGHTYEREGALWFRATDFGDEKDRVLVRANGQTTYFASDVAYHWNKYDRGFDRVIDIF 367 Query: 456 -EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 +H + + LD ++ +AI + G + + R + +R Sbjct: 368 GADHHGYVTRI----KTAVKALGHDESALDVILVQFAILYR-GGDRVQMSTRSGSFVTLR 422 Query: 515 IILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + E + + F+ R ++ + DL A +DN + + Sbjct: 423 ELREE---------VGNDAARYFYVAR----KPEQHMDFDLDLA-KSESSDNPVYYIQYA 468 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI---SPQYLLLEAEKRLYAVI 631 RI +L +++ + ++ + L + E L ++I Sbjct: 469 HA------------------RICSVLRQLKERGLKWDKDMGLKNLDLLEQQHETTLISLI 510 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + IQ + HQ+ L + + +++ + + + ++R RL LL+ ++ + Sbjct: 511 ARYPEVIQSAAASCEPHQLAYYLRELANGLHSYYNAIQLLCEQEQLRCARLCLLESVRQV 570 Query: 692 ILI 694 + Sbjct: 571 LNN 573 >gi|37526009|ref|NP_929353.1| arginyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] gi|39932033|sp|Q7N565|SYR_PHOLL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|36785439|emb|CAE14385.1| Arginyl-tRNA synthetase (Arginine-tRNA ligase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 576 Score = 42.3 bits (98), Expect = 0.28, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 4/94 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I E ++L + L + E+ L + F I H + Sbjct: 463 AYTRVASIFKRAEIDESSLTLPV---ILNEDREQTLATRLLQFEETITTVAREGTPHVMC 519 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N + E+R +RL L Sbjct: 520 AYLYDLAGLFSCFYEHCQILNAESEELRQSRLKL 553 >gi|325473427|gb|EGC76622.1| arginyl-tRNA synthetase [Treponema denticola F0402] Length = 590 Score = 42.3 bits (98), Expect = 0.29, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 3/73 (4%) Query: 595 RIFQILAIEEKKNREI---SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 RI IL E + + +++ L E+E L + DF ++ S K + Sbjct: 474 RISSILRKAETAEGKEKLKNGKLNASLLTNESEWALLKTLEDFPEQVERSALRKDPSALT 533 Query: 652 DLLHSICEPIEIF 664 L+ + + F Sbjct: 534 AYLYELSKAFSRF 546 >gi|116753536|ref|YP_842654.1| arginyl-tRNA synthetase [Methanosaeta thermophila PT] gi|121694355|sp|A0B5P0|SYR_METTP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|116664987|gb|ABK14014.1| arginyl-tRNA synthetase [Methanosaeta thermophila PT] Length = 558 Score = 42.3 bits (98), Expect = 0.29, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 69/187 (36%), Gaps = 22/187 (11%) Query: 523 IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDL--IEAILRPENDNLLTIVDLIKHLNEF 580 I + +++ + + D + R D+ A+ D + D + + Sbjct: 372 ISADELLDEVEKQAYLEVTKRRPEMDEEFRRDVAGKVAVGAVRYDIVRVSADKATTFD-W 430 Query: 581 FSSAKGEKFLL-----SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ EK S R I+ + + E P L + E L I++F Sbjct: 431 KTALDFEKLSAPFIQYSHARACSIINKAGELD-----EFDPGLLRDDYEIALIKKIAEFD 485 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIF--FDQVLVNVDDR---EVRDNRLSLLQYIKN 690 I+ + + HQ+ + E +F +D VL D E+R+ RL L++ +N Sbjct: 486 LVIERAARELKPHQLATYARELAERFNLFYRYDPVL----DAKPVELRNARLGLVRASRN 541 Query: 691 IILIVIN 697 + ++ Sbjct: 542 ALSATLD 548 >gi|261403793|ref|YP_003248017.1| arginyl-tRNA synthetase [Methanocaldococcus vulcanius M7] gi|261370786|gb|ACX73535.1| arginyl-tRNA synthetase [Methanocaldococcus vulcanius M7] Length = 566 Score = 42.3 bits (98), Expect = 0.29, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 10/101 (9%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R IL E K E + + + EK L + +F I+ES ++++ H + Sbjct: 451 AHARCCSILKEAENKGIEDEAIFNYEL--TKEEKELIKKLDEFKDIIKESAENRKVHILA 508 Query: 652 DLLHSICEPIEIFFDQV-----LVNVDDREVRDNRLSLLQY 687 + L + + F+ VN D V+ +RL L++ Sbjct: 509 NYLLELAKIFNRFYANCPILLEKVNDD---VKKSRLKLVKS 546 >gi|295400647|ref|ZP_06810624.1| Arginine--tRNA ligase [Geobacillus thermoglucosidasius C56-YS93] gi|294977228|gb|EFG52829.1| Arginine--tRNA ligase [Geobacillus thermoglucosidasius C56-YS93] Length = 302 Score = 42.3 bits (98), Expect = 0.30, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 41/98 (41%), Gaps = 1/98 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ IL E+ ++ Y+ E E L + +F + E+ + H+I Sbjct: 186 AHARVSSILRQGEELQLSYEGDLQLDYIQTEKEIELLKKLGEFPGAVSEAALKRMPHRIT 245 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQYI 688 + + + F++ V ++ E RL+L++ + Sbjct: 246 GYVFELASALHSFYNAEKVLDPENAEKSRARLALMKAV 283 >gi|258513416|ref|YP_003189638.1| arginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257777121|gb|ACV61015.1| arginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 570 Score = 42.3 bits (98), Expect = 0.30, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 2/105 (1%) Query: 592 SAKRIFQILAIEEKKNREI--SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + RI IL +++ + + + L E E L ++DF I + + H+ Sbjct: 453 AHARICSILRQLDEQGGRLPQAGAVDLALLKEEIELDLIRKMADFPEEIASAAESLAPHR 512 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + +H + + F++ V VDD + + RL L+ +K +I Sbjct: 513 LARYVHELAGLLHSFYNSHRVIVDDAALSEARLVLVMSVKTVIKN 557 >gi|169334677|ref|ZP_02861870.1| hypothetical protein ANASTE_01080 [Anaerofustis stercorihominis DSM 17244] gi|169257415|gb|EDS71381.1| hypothetical protein ANASTE_01080 [Anaerofustis stercorihominis DSM 17244] Length = 557 Score = 41.9 bits (97), Expect = 0.33, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 48/102 (47%), Gaps = 1/102 (0%) Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 +I +I +E+ E + + L + E L VIS+F I ++ + +I Sbjct: 448 ARICSIIRNIGKEVKAE-NLELLNKKEEINLLKVISNFSDEILKASNDLDPSKITKYAMD 506 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + F++ V VDD ++ + RL+L+ +N++ +++ Sbjct: 507 LAGSFHSFYNAHRVIVDDEDLMNARLALVTATRNVLKNTLDI 548 >gi|52842248|ref|YP_096047.1| arginyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81377147|sp|Q5ZTX7|SYR_LEGPH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|52629359|gb|AAU28100.1| arginyl tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 589 Score = 41.9 bits (97), Expect = 0.35, Method: Composition-based stats. Identities = 52/423 (12%), Positives = 116/423 (27%), Gaps = 61/423 (14%) Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVA------ARLEDALHFWKRDQNNLP 345 G ++ S+ G V VV D + Sbjct: 195 VFPANGYKGQYVYEIAQEIWSEQGNQFVHPWISVVENLPADEPEGGDKETYIDAIIARAQ 254 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 +L A L LD L V F + S + Sbjct: 255 SLLGKDGFANFHQHALKTVLDDIKDDLQAFGVRF----DSWFSEQSLFEDGSIEKGIQAL 310 Query: 406 ADVALV--DRAIVLSKAD--------LCTEIVREFPELQGKIGKEYAVLQNENISCCDAI 455 D + +A + + + + D Sbjct: 311 KDRGHTYEREGALWFRATDFGDEKDRVLVRANGQTTYFASDVAYHWNKYDRGFDRVIDIF 370 Query: 456 -EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 +H + + LD ++ +AI + G + + R + +R Sbjct: 371 GADHHGYVTRI----KTAVKALGHDESALDVILVQFAILYR-GGDRVQMSTRSGSFVTLR 425 Query: 515 IILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + E + + F+ R ++ + DL A +DN + + Sbjct: 426 ELREE---------VGNDAARYFYVAR----KPEQHMDFDLDLA-KSESSDNPVYYIQYA 471 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI---SPQYLLLEAEKRLYAVI 631 RI +L +++ + ++ + L + E L ++I Sbjct: 472 HA------------------RICSVLRQLKERGLKWDKDMGLKNLDLLEQQHEATLISLI 513 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + IQ + HQ+ L + + +++ + + + ++R RL LL+ ++ + Sbjct: 514 ARYPEVIQSAAASCEPHQLAYYLRELANGLHSYYNAIQLLCEQEQLRCARLCLLESVRQV 573 Query: 692 ILI 694 + Sbjct: 574 LNN 576 >gi|330467703|ref|YP_004405446.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032] gi|328810674|gb|AEB44846.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032] Length = 573 Score = 41.9 bits (97), Expect = 0.36, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 6/94 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI +LA + ++ + P L AE+ L + F + E + H H++ Sbjct: 462 AHARIRSLLARA----GDPAITVDPTTTLEPAERALILDLDGFADTLTEVLAHYEPHRLC 517 Query: 652 DLLHSICEPIEIFFDQVLVN-VDDREVRDNRLSL 684 L+ + + F++ V D VR NRL+L Sbjct: 518 GYLYRLAQTFTTFYEHCPVLRAPDP-VRSNRLAL 550 >gi|20088942|ref|NP_615017.1| arginyl-tRNA synthetase [Methanosarcina acetivorans C2A] gi|23822191|sp|Q8TUM3|SYR_METAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|19913789|gb|AAM03497.1| arginyl-tRNA synthetase [Methanosarcina acetivorans C2A] Length = 567 Score = 41.9 bits (97), Expect = 0.36, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 22/102 (21%) Query: 595 RIFQILAIEE-KKNREISLEISPQYLLLEAEKRLYAVIS-----------DFGTHIQESM 642 R IL + + + + EI+P L+ ++E L ++ + H+ Sbjct: 453 RACSILEKAKDEAAWDPAEEITPSLLVEDSEIDLIKKMAMFDSIIDLGARELKPHVLAIY 512 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + + + I +D +VR +RL+L Sbjct: 513 ARE-LADSFNQFYRFVPVIA---------AEDEKVRASRLAL 544 >gi|118362077|ref|XP_001014266.1| hypothetical protein TTHERM_00227350 [Tetrahymena thermophila] gi|89296033|gb|EAR94021.1| hypothetical protein TTHERM_00227350 [Tetrahymena thermophila SB210] Length = 2415 Score = 41.9 bits (97), Expect = 0.37, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 13/124 (10%) Query: 543 KLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 + + + I+ + + I + IK+ + F + K + Sbjct: 1199 ETFQQELQNSQQEIKLVFNNYETS---IRNKIKNKDSFIKTD--------LKVLKNFAQK 1247 Query: 603 EEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIE 662 E + + + +E E Y + IQ + K Y Q L I + E Sbjct: 1248 AENIEQLNYCDFQVKLFQIEEEI--YEESNKNYQEIQNLLVKKDYDQAKKQLLQIKQANE 1305 Query: 663 IFFD 666 FFD Sbjct: 1306 QFFD 1309 >gi|91773687|ref|YP_566379.1| arginyl-tRNA synthetase [Methanococcoides burtonii DSM 6242] gi|121691659|sp|Q12V97|SYR_METBU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91712702|gb|ABE52629.1| Arginyl-tRNA synthetase [Methanococcoides burtonii DSM 6242] Length = 567 Score = 41.9 bits (97), Expect = 0.38, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 4/93 (4%) Query: 595 RIFQILAIEEKKNREISLE-ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 R IL + + S E I+ L+ ++E L ++ F + + R H Sbjct: 453 RACSILQKAKDEGLWSSEEPINTTLLVEDSEVSLIKKMAMFDNMLDQCAKELRPHTFAIY 512 Query: 654 LHSICEPIEIF--FDQVLVNVDDREVRDNRLSL 684 + + F F VL N +D ++R +R++L Sbjct: 513 ARELADAFNQFYRFVSVL-NAEDEQLRSSRIAL 544 >gi|312112663|ref|YP_003990979.1| arginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] gi|311217764|gb|ADP76368.1| arginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] Length = 556 Score = 41.9 bits (97), Expect = 0.38, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 41/98 (41%), Gaps = 1/98 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ IL E+ ++ Y+ E E L + +F + E+ + H+I Sbjct: 440 AHARVSSILRQGEELQLSYEGDLQLDYIQTEKEIELLKKLGEFPGAVSEAALKRMPHRIT 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQYI 688 + + + F++ V ++ E RL+L++ + Sbjct: 500 GYVFELASALHSFYNAEKVLDPENAEKSRARLALMKAV 537 >gi|294635811|ref|ZP_06714268.1| arginine--tRNA ligase [Edwardsiella tarda ATCC 23685] gi|291090846|gb|EFE23407.1| arginine--tRNA ligase [Edwardsiella tarda ATCC 23685] Length = 577 Score = 41.9 bits (97), Expect = 0.39, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 4/94 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I +S + L E EK L + F I H + Sbjct: 464 AYTRVASIFKRAGIDENSLSGAV---ILTEEREKALATRLMQFEETILTVAREGTPHVMC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N DD VR +RL L Sbjct: 521 AYLYEVAGLFSSFYEACPILNADDEHVRASRLKL 554 >gi|225181879|ref|ZP_03735314.1| arginyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] gi|225167393|gb|EEG76209.1| arginyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] Length = 564 Score = 41.9 bits (97), Expect = 0.39, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 8/99 (8%) Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 RI IL L+ + E+ + I+ F I + D + + L Sbjct: 456 RICSILRKAAA----WPAPFDATLLVSDEEQLVLGTIARFSDAIARAADTLKPSVLARYL 511 Query: 655 HSICEPIEIFFDQ--VLVNVDDREVRDNRLSLLQYIKNI 691 + F+ Q VL N +D ++R+ RL+L+ ++ + Sbjct: 512 LDLAAAFNRFYHQCPVL-NAED-DIRNARLALIDAVRQV 548 >gi|296271270|ref|YP_003653902.1| arginyl-tRNA synthetase [Thermobispora bispora DSM 43833] gi|296094057|gb|ADG90009.1| arginyl-tRNA synthetase [Thermobispora bispora DSM 43833] Length = 575 Score = 41.9 bits (97), Expect = 0.40, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 4/91 (4%) Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 RI I ++ I L E+ L + FG+ +Q D H++ L Sbjct: 465 RIRSIFRTGSIDPGSVTGPI---RLGHPTERALALQLLKFGSVVQAVADLSEPHRLCGYL 521 Query: 655 HSICEPIEIFFDQVLVN-VDDREVRDNRLSL 684 + + F++ V +D EVR +RL+L Sbjct: 522 FELAQAFTAFYENCPVLKAEDEEVRRSRLAL 552 >gi|239828630|ref|YP_002951254.1| arginyl-tRNA synthetase [Geobacillus sp. WCH70] gi|259511648|sp|C5D9R0|SYR_GEOSW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|239808923|gb|ACS25988.1| arginyl-tRNA synthetase [Geobacillus sp. WCH70] Length = 556 Score = 41.9 bits (97), Expect = 0.41, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 42/98 (42%), Gaps = 1/98 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ IL E+ ++ Y+ E E L + +F + + E+ + H+I Sbjct: 440 AHARVSSILRQGEELQLSYEGDLQLDYIQTEKEIELLKKLGEFPSAVSEAAIKRMPHRIT 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQYI 688 + + + F++ V ++ E RL+L++ + Sbjct: 500 GYVFELASALHSFYNAEKVLDPENIEKSRARLALMKAV 537 >gi|300870723|ref|YP_003785594.1| arginyl-tRNA synthetase ArgS [Brachyspira pilosicoli 95/1000] gi|300688422|gb|ADK31093.1| arginyl-tRNA synthetase, ArgS [Brachyspira pilosicoli 95/1000] Length = 529 Score = 41.9 bits (97), Expect = 0.42, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 50/109 (45%), Gaps = 2/109 (1%) Query: 592 SAKRIFQILAIEEKKNR--EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + R+ I E+KN + + + + E+ +L +I F I ES + Sbjct: 408 AYARVCNIFFKLEEKNMKYDYNKKFDINKISNESTLKLAKMILRFPDEIYESAKSLEVYT 467 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + + + + F+ +V ++ ++R RL+L++ +K I+ I ++ Sbjct: 468 LLNYTYDVASALHKFYYDNIVLEENDDIRQERLTLIRAVKKILGICFDI 516 >gi|239617808|ref|YP_002941130.1| arginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] gi|239506639|gb|ACR80126.1| arginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] Length = 542 Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 53/103 (51%), Gaps = 2/103 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I ++ ++ I P+ L+ E EKRL + +F + + + + +++ Sbjct: 427 AHARIASIFRTASQRGMKLDTRI-PEVLMNEEEKRLIKQLGNFPEILDQITEDYKTNRLT 485 Query: 652 DLLHSICEPIEIFFDQ-VLVNVDDREVRDNRLSLLQYIKNIIL 693 + L S+ F+++ V+V+ D E+ RL+L + +KN++ Sbjct: 486 NYLESLAGAFHAFYNKHVVVDADSPELSMFRLTLCKAVKNVLS 528 >gi|42526483|ref|NP_971581.1| arginyl-tRNA synthetase [Treponema denticola ATCC 35405] gi|81412594|sp|Q73P28|SYR_TREDE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|41816676|gb|AAS11462.1| arginyl-tRNA synthetase [Treponema denticola ATCC 35405] Length = 590 Score = 41.6 bits (96), Expect = 0.43, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 3/73 (4%) Query: 595 RIFQILAIEEKKNREI---SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 RI IL E + +++ L E+E L + DF ++ S K + Sbjct: 474 RISSILRKAETAEGKEKLKDGKLNASLLTNESEWELLKTLEDFPEQVERSALRKDPSALT 533 Query: 652 DLLHSICEPIEIF 664 L+ + + F Sbjct: 534 AYLYELSKAFSRF 546 >gi|15675554|ref|NP_269728.1| hypothetical protein SPy_1697 [Streptococcus pyogenes M1 GAS] gi|19746605|ref|NP_607741.1| hypothetical protein spyM18_1707 [Streptococcus pyogenes MGAS8232] gi|28895302|ref|NP_801652.1| hypothetical protein SPs0390 [Streptococcus pyogenes SSI-1] gi|50914785|ref|YP_060757.1| hypothetical protein M6_Spy1438 [Streptococcus pyogenes MGAS10394] gi|71904095|ref|YP_280898.1| hypothetical protein M28_Spy1433 [Streptococcus pyogenes MGAS6180] gi|71911203|ref|YP_282753.1| hypothetical protein M5005_Spy_1390 [Streptococcus pyogenes MGAS5005] gi|94991020|ref|YP_599120.1| hypothetical protein MGAS10270_Spy1510 [Streptococcus pyogenes MGAS10270] gi|94994899|ref|YP_602997.1| hypothetical protein MGAS10750_Spy1502 [Streptococcus pyogenes MGAS10750] gi|13622756|gb|AAK34449.1| hypothetical protein SPy_1697 [Streptococcus pyogenes M1 GAS] gi|19748822|gb|AAL98240.1| hypothetical protein spyM18_1707 [Streptococcus pyogenes MGAS8232] gi|28810548|dbj|BAC63485.1| hypothetical protein [Streptococcus pyogenes SSI-1] gi|50903859|gb|AAT87574.1| Hypothetical protein M6_Spy1438 [Streptococcus pyogenes MGAS10394] gi|71803190|gb|AAX72543.1| hypothetical protein M28_Spy1433 [Streptococcus pyogenes MGAS6180] gi|71853985|gb|AAZ52008.1| hypothetical protein M5005_Spy1390 [Streptococcus pyogenes MGAS5005] gi|94544528|gb|ABF34576.1| hypothetical protein MGAS10270_Spy1510 [Streptococcus pyogenes MGAS10270] gi|94548407|gb|ABF38453.1| hypothetical protein MGAS10750_Spy1502 [Streptococcus pyogenes MGAS10750] Length = 240 Score = 41.6 bits (96), Expect = 0.43, Method: Composition-based stats. Identities = 16/128 (12%), Positives = 37/128 (28%), Gaps = 13/128 (10%) Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 + + + + +K +N+ A + K + ++ +KK + Sbjct: 41 GSHPQTQDKVAKHSKSAASLLKKAVKAVNDADRLATAAAIQEAQKAVDKLAESSKKKTLQ 100 Query: 610 ISLEISPQYLLLE---------AEKRLYAVISDFGTHIQESMDHKRYHQIG----DLLHS 656 L ++ E AE+ L + D + +K D + Sbjct: 101 EQLNVAKAKQEQEDAATQAVKAAEETLNQNLKDIAQKAVNDLSNKGKKAALQSRLDAILP 160 Query: 657 ICEPIEIF 664 I+ F Sbjct: 161 AKPIIDEF 168 >gi|108762554|ref|YP_631488.1| arginyl-tRNA synthetase [Myxococcus xanthus DK 1622] gi|21307601|gb|AAK59398.1| Arg-tRNA synthetase [Myxococcus xanthus] gi|108466434|gb|ABF91619.1| arginyl-tRNA synthetase [Myxococcus xanthus DK 1622] Length = 573 Score = 41.6 bits (96), Expect = 0.45, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 13/102 (12%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R +L K L L E+ L I ++++ + + Sbjct: 455 AHARAVNVLR----KGGGAPASYDAALLTLPEEQALLREIMRLPEVVRDAAEQYEPSLVA 510 Query: 652 DLLHSICEPIEIFF-------DQVLVNVD-DREVRDNRLSLL 685 LL + + ++ D+ +NV+ + +R RL+L+ Sbjct: 511 RLLLDVASALSRYYTLGNQERDK-RINVEGNDALRSARLALI 551 >gi|315222079|ref|ZP_07863989.1| PRD domain protein [Streptococcus anginosus F0211] gi|315188829|gb|EFU22534.1| PRD domain protein [Streptococcus anginosus F0211] Length = 557 Score = 41.6 bits (96), Expect = 0.46, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 44/139 (31%), Gaps = 10/139 (7%) Query: 526 SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + L F + R++ D + + E + L + LNE + Sbjct: 195 EDLLLSDELQDFLNQRVQDVEQDLGKKINRHEIKFMLQVLPYLLLSCRNMALNE----EE 250 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E I + + + KN +L+ + L + E L AV+ + + Sbjct: 251 QEDLKREFTLIRKRIEYQAAKNLNSNLQATFGLQLNDIEISLLAVL------LLSYRKDR 304 Query: 646 RYHQIGDLLHSICEPIEIF 664 H + E I+ F Sbjct: 305 DIHATSQDFVQLKEAIDEF 323 >gi|145627706|ref|ZP_01783507.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|144979481|gb|EDJ89140.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.1-21] Length = 577 Score = 41.6 bits (96), Expect = 0.47, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 79/225 (35%), Gaps = 17/225 (7%) Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 ++ S + + W I K D ++L G++ + ++ + Sbjct: 333 ALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRIGGTVKLAD 392 Query: 534 LILFFHDRLKLYLHDRDIR--HDLIEAIL------RPENDNLLTIVDLIKHLNEFFSSAK 585 L+ +R + +++++ +D EA++ + +L ++ ++ + Sbjct: 393 LLDEAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSK-NRTTDYVFDWDNMLS 451 Query: 586 GEKFLL-----SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 E + RI I + + + P + + E+ L + F +Q Sbjct: 452 FEGNTAPYMQYAYTRIRSIFNKTDINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQT 509 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 H + L+ + F++ + N +D ++ +RL L Sbjct: 510 VGKEGTPHVLCAYLYELAGIFSSFYEHCPILNAEDESIKLSRLKL 554 >gi|21911013|ref|NP_665281.1| hypothetical protein SpyM3_1477 [Streptococcus pyogenes MGAS315] gi|139473274|ref|YP_001127989.1| hypothetical protein SpyM50400 [Streptococcus pyogenes str. Manfredo] gi|21905221|gb|AAM80084.1| hypothetical protein SpyM3_1477 [Streptococcus pyogenes MGAS315] gi|134271520|emb|CAM29743.1| putative lipoprotein [Streptococcus pyogenes str. Manfredo] Length = 228 Score = 41.6 bits (96), Expect = 0.50, Method: Composition-based stats. Identities = 16/128 (12%), Positives = 37/128 (28%), Gaps = 13/128 (10%) Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 + + + + +K +N+ A + K + ++ +KK + Sbjct: 29 GSHPQTQDKVAKHSKSAASLLKKAVKAVNDADRLATAAAIQEAQKAVDKLAESSKKKTLQ 88 Query: 610 ISLEISPQYLLLE---------AEKRLYAVISDFGTHIQESMDHKRYHQIG----DLLHS 656 L ++ E AE+ L + D + +K D + Sbjct: 89 EQLNVAKAKQEQEDAATQAVKAAEETLNQNLKDIAQKAVNDLSNKGKKAALQSRLDAILP 148 Query: 657 ICEPIEIF 664 I+ F Sbjct: 149 AKPIIDEF 156 >gi|320010139|gb|ADW04989.1| arginyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331] Length = 589 Score = 41.6 bits (96), Expect = 0.51, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL + P+ L AE+ L + FG ++E + H++ Sbjct: 476 AYARIRSILRKA----GDAKPAAHPELDLAPAERALGLHLDQFGAVLEEVAEGYEPHKLA 531 Query: 652 DLLHSICEPIEIFFDQVLVN-VDDRE-VRDNRLSL 684 L+ + + F+DQ V ++ V +NRL L Sbjct: 532 AYLYQLASHLTTFYDQCQVLSDENPAEVVENRLFL 566 >gi|240948908|ref|ZP_04753264.1| arginyl-tRNA synthetase [Actinobacillus minor NM305] gi|240296723|gb|EER47334.1| arginyl-tRNA synthetase [Actinobacillus minor NM305] Length = 575 Score = 41.6 bits (96), Expect = 0.53, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 5/94 (5%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I A ++ I L + E+ L + F + H + Sbjct: 463 AYTRIRSIFARAGIDANNLTGNI---LLTEDKERALAVKLLQFEEALNGVAKEGMPHILC 519 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N + V+++RL L Sbjct: 520 QYLYELAGTFSSFYEACPILNAE-EAVKNSRLRL 552 >gi|308158955|gb|EFO61512.1| ABC transporter, ATP-binding protein [Giardia lamblia P15] Length = 781 Score = 41.2 bits (95), Expect = 0.56, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 101/357 (28%), Gaps = 35/357 (9%) Query: 269 KKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAA 328 + L + I +T L +V+N+ V G + V+ Sbjct: 37 ENTLDTDADSISRATQTIAPVIHNCRVTASLDEAEEIVTNLVCEVCSLIAVHGRNSTVSL 96 Query: 329 RLEDA-------------LHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDML 375 RL+DA +WK Q + + + + ++ L ++ RL Sbjct: 97 RLDDAVSVSQQLQKVAANNEYWKGIQTARDLGMQKLQFQMMKSTERARALAEKR-RLKEK 155 Query: 376 DVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQG 435 V + + Q I D + + D + F Sbjct: 156 HVSKNETTAADNAVSISQTKFVPRTGQAIKLDRVTLAYGKNILLED--CDFTFHFGRRYS 213 Query: 436 KIGKE------YAVLQNENISCCDAIEEHLKPRGPLENV-PTNKISITVSLADKLDTLIN 488 IG+ C ++ K + V P+ I V L+ D + Sbjct: 214 LIGRNGTGKSSLLRAIAYGEIACITNKDQYKILYVSQEVAPSTDRVIDVVLSANEDYIRL 273 Query: 489 FWAINEKPSG----SKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKL 544 A + + + LR A+ G I EN + L + + L Sbjct: 274 TTAEHAIKTAIDLLEEYIMRLRNASHGSSSIKSENPVSCTLKDLLPESVLTELNASIFPS 333 Query: 545 YLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 D I A+L L + +L L + + + + R QILA Sbjct: 334 ISVD-------ISAVLDASTTEAL-LDNLGIALQQRYDEMEAADLFGAQARASQILA 382 >gi|300312336|ref|YP_003776428.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] gi|300075121|gb|ADJ64520.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 536 Score = 41.2 bits (95), Expect = 0.56, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 35/123 (28%), Gaps = 26/123 (21%) Query: 555 LIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI 614 E ++ NL+ + + + A G F A K + E ++ Sbjct: 51 KTERLMADWYTNLVAGIRRTIAIAKSSDPALGPYFAAEV-------AASSKSSGEYQKQV 103 Query: 615 SPQYLLLEAEKRLYAVISDFGT-------HIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 L EK L+ I + I ++ + +L DQ Sbjct: 104 -EALLSTPEEKALFQKIGELRKLYLSSRDEINKAKAAGNTEEAMRIL-----------DQ 151 Query: 668 VLV 670 V V Sbjct: 152 VFV 154 >gi|319790089|ref|YP_004151722.1| arginyl-tRNA synthetase [Thermovibrio ammonificans HB-1] gi|317114591|gb|ADU97081.1| arginyl-tRNA synthetase [Thermovibrio ammonificans HB-1] Length = 547 Score = 41.2 bits (95), Expect = 0.57, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 45/101 (44%), Gaps = 2/101 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ +L +++ S E + L + E++L +Q++ + H++ Sbjct: 432 AHARLCSVLDKAKERGFLPSKE-NLDLLSSDEERKLITGCYQLKYELQQAAQKREPHRLT 490 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSLLQYIKNI 691 L + + F+++ V N D+ ++ RL L++ ++ Sbjct: 491 YYLIELASTLHRFYNKHKVINEDNPQLTRARLYLVEAVRKT 531 >gi|307825835|ref|ZP_07656051.1| arginyl-tRNA synthetase [Methylobacter tundripaludum SV96] gi|307733143|gb|EFO04004.1| arginyl-tRNA synthetase [Methylobacter tundripaludum SV96] Length = 586 Score = 41.2 bits (95), Expect = 0.57, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 48/106 (45%), Gaps = 3/106 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEI---SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + R+ +L ++KN E +L + + L E E L ++ + ++ + H Sbjct: 468 AYARVCSVLRQLDEKNWERNLPLGMENLALLTEEHETNLLGTLARYPEVLERAALQYEPH 527 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 Q+ L + +++ V+D ++R+ RL+L+ +K I+ Sbjct: 528 QLIQYLRELANEFHTYYNAHQFLVEDAKIRNARLNLICAVKQILAN 573 >gi|294630717|ref|ZP_06709277.1| arginyl-tRNA synthetase [Streptomyces sp. e14] gi|292834050|gb|EFF92399.1| arginyl-tRNA synthetase [Streptomyces sp. e14] Length = 590 Score = 41.2 bits (95), Expect = 0.57, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL E P+ L AE+ L + FG + E H++ Sbjct: 477 AYARIQSILRKA----GEARPAAHPELELAPAERELGLQLDRFGETVLEVAASYEPHKLA 532 Query: 652 DLLHSICEPIEIFFDQVLVNVDD--REVRDNRLSL 684 L+ + + F+DQ V D EV +NRL L Sbjct: 533 AYLYQLASLLTTFYDQCQVLSPDNAPEVVENRLFL 567 >gi|85711525|ref|ZP_01042583.1| arginyl-tRNA synthetase [Idiomarina baltica OS145] gi|85694677|gb|EAQ32617.1| arginyl-tRNA synthetase [Idiomarina baltica OS145] Length = 580 Score = 41.2 bits (95), Expect = 0.57, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 37/97 (38%), Gaps = 4/97 (4%) Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L + R+ I +++ ++ + L E E L + F + D H Sbjct: 464 LLYAFTRVNSIFDKLGERSFDMDADW---LLEDERELALANQLIRFEEVVNRVFDKAMPH 520 Query: 649 QIGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 + L + F++ + N +D VR++RL L Sbjct: 521 FLCGYLFELAGYFSSFYEACPILNQEDEAVRNSRLKL 557 >gi|304407316|ref|ZP_07388969.1| arginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304343757|gb|EFM09598.1| arginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 558 Score = 41.2 bits (95), Expect = 0.60, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 5/113 (4%) Query: 592 SAKRIFQILAIEEKKNREISL--EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + RI I E++ + EI L+ E E L + + I ++ + H+ Sbjct: 441 AHARICSIFRQAEEQGIAMRSLSEIDLSRLVTEQEYDLLRKLGELPQEITDAAEQYAPHR 500 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + ++ + ++ V DD E RL+LL + +I V+ K+V Sbjct: 501 LIRYVYELAAQFHSYYKAERVMTDDAEQTQARLALLASTRIVIANVL---KLV 550 >gi|300313639|ref|YP_003777731.1| arginyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gi|300076424|gb|ADJ65823.1| arginyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 577 Score = 41.2 bits (95), Expect = 0.60, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 39/103 (37%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI +L + L E L A ++++ + ++ HQ+ Sbjct: 462 AHARICTVLGKSGVDEEALKSSADLSLLTAPREATLLAKLAEYPDMLAHALQELGPHQVA 521 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 L + + +++ V VDD R RL+LL + ++ Sbjct: 522 FYLRDLAGELHSYYNAERVLVDDVPTRSARLALLSATRQVLRN 564 >gi|146305572|ref|YP_001186037.1| arginyl-tRNA synthetase [Pseudomonas mendocina ymp] gi|166232824|sp|A4XPN9|SYR_PSEMY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|145573773|gb|ABP83305.1| arginyl-tRNA synthetase [Pseudomonas mendocina ymp] Length = 579 Score = 41.2 bits (95), Expect = 0.61, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 4/97 (4%) Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L + R+ + K EI I L+ E E+ L A ++ FG + D H Sbjct: 463 LLYAYTRVAGVFRKLGKGIDEIGGRI---ALVAEQEQALAAKLAQFGELLASVADKGTPH 519 Query: 649 QIGDLLHSICEPIEIFFDQVLVN-VDDREVRDNRLSL 684 + L+ + F++ + +D RD+RL L Sbjct: 520 MLCSYLYDLAGLFSSFYENCPILAAEDEATRDSRLRL 556 >gi|54294929|ref|YP_127344.1| arginyl-tRNA synthetase [Legionella pneumophila str. Lens] gi|81368288|sp|Q5WV09|SYR_LEGPL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|53754761|emb|CAH16248.1| arginine tRNA synthetase [Legionella pneumophila str. Lens] Length = 589 Score = 41.2 bits (95), Expect = 0.62, Method: Composition-based stats. Identities = 58/445 (13%), Positives = 123/445 (27%), Gaps = 73/445 (16%) Query: 270 KYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVV--- 326 +YL L E I F +G ++ S+ G V VV Sbjct: 185 RYLELAGEPI---------AFPANGYKGQ---YVYEIAQEMWSEQGNQFVHPWISVVDNL 232 Query: 327 ---AARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKI 383 D + +L A L LD L V F Sbjct: 233 PADEPEGGDKETYIDAIIARAQSLLGKDGFANFHQHALKTVLDDIKDDLQAFGVRF---- 288 Query: 384 GTQGERVSRIRVLGKKIAQLIDADVALV--DRAIVLSKAD--------LCTEIVREFPEL 433 + S D + +A + + Sbjct: 289 DSWFSEQSLFEDGSIGKGIQALKDRGHTYEREGALWFRATDFGDEKDRVLVRANGQTTYF 348 Query: 434 QGKIGKEYAVLQNENISCCDAI-EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 + + D +H + + LD ++ +AI Sbjct: 349 ASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRI----KTAVKALGHDESALDVILVQFAI 404 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIR 552 + G + + R + +R + E + + F+ R ++ + Sbjct: 405 LYR-GGDRVQMSTRSGSFVTLRELREE---------VGNDAARYFYVAR----KPEQHMD 450 Query: 553 HDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 DL A +DN + + RI +L +++ + Sbjct: 451 FDLDLA-KSESSDNPVYYIQYAHA------------------RICSVLRQLKERGLKWDK 491 Query: 613 EI---SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 ++ + L + E L ++I+ + IQ + HQ+ L + + +++ + Sbjct: 492 DMGLKNLDLLEQQHEATLISLIARYPEVIQSAAASCEPHQLAYYLRELANGLHSYYNAIQ 551 Query: 670 VNVDDREVRDNRLSLLQYIKNIILI 694 + + ++R RL LL+ ++ ++ Sbjct: 552 LLCEQEQLRCARLCLLESVRQVLNN 576 >gi|227824820|ref|ZP_03989652.1| arginyl-tRNA synthetase [Acidaminococcus sp. D21] gi|226905319|gb|EEH91237.1| arginyl-tRNA synthetase [Acidaminococcus sp. D21] Length = 552 Score = 41.2 bits (95), Expect = 0.64, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 43/102 (42%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL E+++ + L E L + D+ ++ + + H+I Sbjct: 437 AHARICSILKQMEEEHIALDPHCDLSVLGEPVEIDLIKKLGDYEDLVETAAAERAPHKIA 496 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ + F++Q V D +++ RL+L+ ++ + Sbjct: 497 HYVYELAGIFHSFYNQCRVLGVDPKLQQARLALIMATRHTLR 538 >gi|326778607|ref|ZP_08237872.1| arginyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] gi|326658940|gb|EGE43786.1| arginyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] Length = 590 Score = 41.2 bits (95), Expect = 0.67, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL + P+ L AE+ L + FG + E + H++ Sbjct: 477 AYARIRSILRKA----GDAVPAAHPELELAPAERALGLHLDQFGEVLAEVGEGYEPHKLA 532 Query: 652 DLLHSICEPIEIFFDQVLVNVDD--REVRDNRLSL 684 L+ + + F+DQ V D EV +NRL L Sbjct: 533 AYLYQLASHLTTFYDQCQVLSPDNAPEVVENRLFL 567 >gi|186683275|ref|YP_001866471.1| amino acid adenylation domain-containing protein [Nostoc punctiforme PCC 73102] gi|186465727|gb|ACC81528.1| amino acid adenylation domain protein [Nostoc punctiforme PCC 73102] Length = 4615 Score = 41.2 bits (95), Expect = 0.71, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 57/185 (30%), Gaps = 30/185 (16%) Query: 26 SIILIGLLKEEGVIYQNMRQ------YWTPHRLFLYLKGLSPHSPEK--IEERLGPRVGA 77 I L+++ + + + P L + K L +E P + Sbjct: 1726 YKNYIAWLQKQNLAKAKVFWQQKLQGFSAPTPLVVD-KTLKKQQQSSYSKQEIYLPEL-- 1782 Query: 78 GKKAIDGFLRSTGLQTIS------DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVA 131 A+ GF R L + + + + DV V + ++++V + Sbjct: 1783 ATNALQGFARQHQLTLNNIVQGAWALLLSRYSGEADVVFGVTVSGRPPALIGVESMVGLF 1842 Query: 132 IQK-------------VPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 I +PW K ++ S +++ + ++ + E I+ Sbjct: 1843 INTLPLRVEVPESGQLLPWLKDLQAQQVESEQYSYTPLVEIQGWSDVPRGMPLFESIVVF 1902 Query: 179 DLKEI 183 + I Sbjct: 1903 ENYPI 1907 >gi|256545516|ref|ZP_05472876.1| arginine--tRNA ligase [Anaerococcus vaginalis ATCC 51170] gi|256398727|gb|EEU12344.1| arginine--tRNA ligase [Anaerococcus vaginalis ATCC 51170] Length = 566 Score = 40.8 bits (94), Expect = 0.74, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 38/93 (40%), Gaps = 3/93 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R +L K+ +++ + L + E L + F I + + + Sbjct: 454 TYARAKSVLRKAGKEEF---GQMNFEKLNTDEEYSLIKALESFQDAIILAKNRLEPSVVA 510 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + I + F++ + VDD ++++ RL+L Sbjct: 511 RKVMEIAQKFNKFYNSTQILVDDEKLKEERLAL 543 >gi|269128153|ref|YP_003301523.1| arginyl-tRNA synthetase [Thermomonospora curvata DSM 43183] gi|268313111|gb|ACY99485.1| arginyl-tRNA synthetase [Thermomonospora curvata DSM 43183] Length = 574 Score = 40.8 bits (94), Expect = 0.74, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 38/88 (43%) Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 +I +I K N E ++ + AE+ L + F I + + +H++ L+ Sbjct: 464 ARICSIFRKGNIEPPRDVERVLIAEPAERALALQLLAFEGLINQVAQNLEFHRLAQYLYG 523 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + F++ V + EVR +RL L Sbjct: 524 LATAFTSFYENCPVLQAEGEVRTSRLVL 551 >gi|115496394|ref|NP_001070042.1| hypothetical protein LOC767632 [Danio rerio] gi|115313646|gb|AAI24071.1| Zgc:152658 [Danio rerio] Length = 338 Score = 40.8 bits (94), Expect = 0.76, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 43/116 (37%), Gaps = 10/116 (8%) Query: 559 ILRPENDNLLTIVDLIKHLNEFFSSAKGE----KFLLSAKRI-----FQILAIEEKKNRE 609 + + N ++ L++ +++ + G+ + L +R +IL E++ ++ Sbjct: 223 VFNNKEKNPEQVIQLLEQIDKMVTGNGGQHYTSEMLEKVERAIEKEKRRILREMEEQRQK 282 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 + Q EK L ++ + + I ++ ++ + FF Sbjct: 283 EIAALREQLEDEAYEKAL-QTLNSKYEQVARYKAEIDFPAILHVVTTLINALSRFF 337 >gi|239942144|ref|ZP_04694081.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|239988607|ref|ZP_04709271.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379] gi|291445591|ref|ZP_06584981.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|291348538|gb|EFE75442.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] Length = 590 Score = 40.8 bits (94), Expect = 0.78, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL + P+ L AE+ L + FG + E H++ Sbjct: 477 AYARIQSILRKA----GDAVPAAHPELTLAPAERALGLHLDQFGEVLAEVAAGYEPHKLA 532 Query: 652 DLLHSICEPIEIFFDQVLVNVDD--REVRDNRLSL 684 L+ + + F+DQ V D EV +NRL L Sbjct: 533 AYLYQLASHLTTFYDQCQVLSPDNAPEVVENRLFL 567 >gi|138896975|ref|YP_001127428.1| arginyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|196249795|ref|ZP_03148491.1| arginyl-tRNA synthetase [Geobacillus sp. G11MC16] gi|166232790|sp|A4ITM9|SYR_GEOTN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|134268488|gb|ABO68683.1| Arginyl tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|196210671|gb|EDY05434.1| arginyl-tRNA synthetase [Geobacillus sp. G11MC16] Length = 557 Score = 40.8 bits (94), Expect = 0.79, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 39/99 (39%), Gaps = 2/99 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEIS-PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + R+ IL ++ ++ + E E L + DF + E+ + H++ Sbjct: 440 AHARVSSILRQAKEHQLSYEGDVDLHHLVETEKEIELLKALGDFPDVVAEAALKRMPHRV 499 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVR-DNRLSLLQYI 688 + + F++ V D+ + RL+L++ + Sbjct: 500 TAYAFDLASALHSFYNAEKVLDLDQIEKTKARLALVKAV 538 >gi|148826102|ref|YP_001290855.1| arginyl-tRNA synthetase [Haemophilus influenzae PittEE] gi|229847101|ref|ZP_04467206.1| arginyl-tRNA synthetase [Haemophilus influenzae 7P49H1] gi|166232791|sp|A5UCH1|SYR_HAEIE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148716262|gb|ABQ98472.1| arginyl-tRNA synthetase [Haemophilus influenzae PittEE] gi|229809930|gb|EEP45651.1| arginyl-tRNA synthetase [Haemophilus influenzae 7P49H1] Length = 577 Score = 40.8 bits (94), Expect = 0.86, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I E + + P + + E+ L + F +Q H + Sbjct: 463 AYTRIRSIFNKTEINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQTVGKEGTPHVLC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N +D V+ +RL L Sbjct: 521 AYLYELAGIFSSFYEHCPILNAEDEAVKLSRLKL 554 >gi|223042112|ref|ZP_03612285.1| arginyl-tRNA synthetase [Actinobacillus minor 202] gi|223017100|gb|EEF15539.1| arginyl-tRNA synthetase [Actinobacillus minor 202] Length = 575 Score = 40.8 bits (94), Expect = 0.86, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 5/94 (5%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I A E++ EI +L + E+ L + F + H + Sbjct: 463 AYTRIRSIFARAGIDANELTGEI---HLTEDKERALAVKLLQFEEALNGVAKEGMPHILC 519 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N + V+++RL L Sbjct: 520 QYLYELAGTFSSFYEACPILNAE-EAVKNSRLRL 552 >gi|161528194|ref|YP_001582020.1| arginyl-tRNA synthetase [Nitrosopumilus maritimus SCM1] gi|160339495|gb|ABX12582.1| arginyl-tRNA synthetase [Nitrosopumilus maritimus SCM1] Length = 628 Score = 40.8 bits (94), Expect = 0.87, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 4/105 (3%) Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 R +IL EK R S+++ L ++E L +I F ++++ ++ I Sbjct: 518 RASRIL---EKSGRTPSIDVDFSLLKEQSEIDLVKMIGLFNLQVRDAANNLSPKVISRYC 574 Query: 655 HSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQYIKNIILIVINV 698 H + F+++ V D ++ ++RL L+ K I +N+ Sbjct: 575 HDLAVTFNSFYEKSKVLDLGDEKLENSRLCLVNSFKITIEKALNL 619 >gi|30248381|ref|NP_840451.1| arginyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] gi|39932153|sp|Q82XC1|SYR_NITEU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|30138267|emb|CAD84275.1| Arginyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] Length = 586 Score = 40.8 bits (94), Expect = 0.90, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 35/87 (40%) Query: 608 REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 +I + L AE L + DF I+ + + H I L + +++ Sbjct: 487 EDILARAETELLTDPAELVLLQKMIDFTDTIEAAAKERAPHLIAFFLRELAGEFHSYYNS 546 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILI 694 V+D ++ RL+L+ ++ I+ Sbjct: 547 TRFLVEDESLKITRLALISAVRQILSK 573 >gi|290475235|ref|YP_003468121.1| arginine tRNA synthetase [Xenorhabdus bovienii SS-2004] gi|289174554|emb|CBJ81348.1| arginine tRNA synthetase [Xenorhabdus bovienii SS-2004] Length = 576 Score = 40.8 bits (94), Expect = 0.92, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 4/94 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I + ++L + L E E+ L + F I H + Sbjct: 463 AYTRVSSIFKRADIDENNLTLPV---MLNEEREQALATRLLQFEETITTVAREGTPHVMC 519 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N D E+R +RL L Sbjct: 520 AYLYDLAGLFSGFYEHCPILNADSEELRQSRLKL 553 >gi|92097822|gb|AAI15338.1| LOC555678 protein [Danio rerio] gi|220677988|emb|CAX14094.1| novel protein with a AIG1 family domain (zgc:152658) [Danio rerio] Length = 339 Score = 40.8 bits (94), Expect = 0.92, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 43/116 (37%), Gaps = 10/116 (8%) Query: 559 ILRPENDNLLTIVDLIKHLNEFFSSAKGE----KFLLSAKRI-----FQILAIEEKKNRE 609 + + N ++ L++ +++ + G+ + L +R +IL E++ ++ Sbjct: 224 VFNNKEKNPEQVIQLLEQIDKMVTGNGGQHYTSEMLEKVERAIEKEKRRILREMEEQRQK 283 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 + Q EK L ++ + + I ++ ++ + FF Sbjct: 284 EIAALREQLEDEAYEKAL-QTLNSKYEQVARYKAEIDFPAILHVVTTLINALSKFF 338 >gi|145631015|ref|ZP_01786791.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021] gi|144983482|gb|EDJ90958.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021] Length = 321 Score = 40.4 bits (93), Expect = 0.98, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I E + + P + + E+ L + F +Q H + Sbjct: 207 AYTRIRSIFNKTEINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQTVGKEGTPHVLC 264 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N +D V+ +RL L Sbjct: 265 AYLYELAGIFSSFYEHCPILNAEDEAVKLSRLKL 298 >gi|15643850|ref|NP_228899.1| arginyl-tRNA synthetase [Thermotoga maritima MSB8] gi|7674352|sp|Q9X0H8|SYR_THEMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|4981637|gb|AAD36169.1|AE001768_18 arginyl-tRNA synthetase [Thermotoga maritima MSB8] Length = 546 Score = 40.4 bits (93), Expect = 1.0, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 7/97 (7%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI---SDFGTHIQESMDHKRYH 648 + RI + + EKK + + L E E+ L + + + + R Sbjct: 430 AHARIHNLFSNAEKKGVKFEEGKHLELLGNEEERVLMRNLGMFNTALKEVAQMFAPNRLT 489 Query: 649 QIGDLLHSICEPIEIFFDQ-VLVNVDDREVRDNRLSL 684 L E F+ + V+V+ ++ E+ + RL+L Sbjct: 490 NYLQSLA---ESFHAFYTKHVIVDPENPELSNARLNL 523 >gi|110835103|ref|YP_693962.1| arginyl-tRNA synthetase [Alcanivorax borkumensis SK2] gi|123149267|sp|Q0VMA8|SYR_ALCBS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|110648214|emb|CAL17690.1| arginyl-tRNA synthetase [Alcanivorax borkumensis SK2] Length = 584 Score = 40.4 bits (93), Expect = 1.0, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 4/97 (4%) Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L + R+ + E +S + L +AE L A + FG +Q D + H Sbjct: 468 LLYAYTRVASVFRKAELDMANVSGDF---LLNEDAEHTLAARLVQFGEVLQNVADKGQPH 524 Query: 649 QIGDLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSL 684 + L+ + F++ + +D +R +RL L Sbjct: 525 LLSAYLYDVAGLFSSFYEHCPILSSEDERIRQSRLKL 561 >gi|306826887|ref|ZP_07460187.1| conserved hypothetical protein [Streptococcus pyogenes ATCC 10782] gi|304430905|gb|EFM33914.1| conserved hypothetical protein [Streptococcus pyogenes ATCC 10782] Length = 240 Score = 40.4 bits (93), Expect = 1.0, Method: Composition-based stats. Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 13/128 (10%) Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 + + + + +K +N+ A + K + ++ +K+ + Sbjct: 41 GSHPQTQDKVAKHSKSAASLLKKAVKAVNDADRLATAAAIQEAQKAVDKLAESSKKETLQ 100 Query: 610 ISLEISPQYLLLE---------AEKRLYAVISDFGTHIQESMDHKRYHQIG----DLLHS 656 L ++ E AE+ L + D + +K D + Sbjct: 101 EQLNVAKAKQEQEDAATQAVKAAEETLNQNLKDIAQKAVNDLSNKGKKAALQSRLDAILP 160 Query: 657 ICEPIEIF 664 I+ F Sbjct: 161 AKPIIDEF 168 >gi|170289501|ref|YP_001739739.1| arginyl-tRNA synthetase [Thermotoga sp. RQ2] gi|238688807|sp|B1L826|SYR_THESQ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|170177004|gb|ACB10056.1| arginyl-tRNA synthetase [Thermotoga sp. RQ2] Length = 546 Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 7/97 (7%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI---SDFGTHIQESMDHKRYH 648 + RI + + EKK + + L E E+ L + + + + R Sbjct: 430 AHARIHNLFSNAEKKGVKFEEGKHLELLGNEEERVLMRNLGMFNTALKEVAQMFAPNRLT 489 Query: 649 QIGDLLHSICEPIEIFFDQ-VLVNVDDREVRDNRLSL 684 L E F+ + V+V+ ++ E+ + RL+L Sbjct: 490 NYLQSLA---ESFHAFYTKHVIVDPENPELSNARLNL 523 >gi|194290515|ref|YP_002006422.1| methionyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424] gi|226710902|sp|B3R678|SYM_CUPTR RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|193224350|emb|CAQ70361.1| methionine tRNA synthetase [Cupriavidus taiwanensis LMG 19424] Length = 688 Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats. Identities = 6/68 (8%), Positives = 19/68 (27%), Gaps = 5/68 (7%) Query: 598 QIL-AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 I + ++ L L + + + + + Y + L+ Sbjct: 395 NIASRAAGFLVKRFDGKVDEAALAHP----LLEQLREAAPQVAHLYESREYSKALRLVME 450 Query: 657 ICEPIEIF 664 + + + F Sbjct: 451 LTDAVNAF 458 >gi|329764907|ref|ZP_08256496.1| arginyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138576|gb|EGG42823.1| arginyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 516 Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 4/96 (4%) Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 R +I+ EK R S+++ L ++E L I F + + + I Sbjct: 406 RASRII---EKSGRSPSIDVDFSLLTDDSELGLVKTIGLFELVVLNAAQNLSPKVIARYC 462 Query: 655 HSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQYIK 689 H + F++ V V D+++ ++RL L+ K Sbjct: 463 HDLAVSFNSFYEHVKVIDLGDQKLENSRLCLVNSFK 498 >gi|72160673|ref|YP_288330.1| arginyl-tRNA synthetase [Thermobifida fusca YX] gi|109895049|sp|Q47TB0|SYR_THEFY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71914405|gb|AAZ54307.1| arginyl-tRNA synthetase [Thermobifida fusca YX] Length = 576 Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 1/90 (1%) Query: 596 IFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 + +I +I K + + P + AE+ L + DFG + + D H++ L Sbjct: 464 VARIRSIFRKGGIDPAQVTGPIQVTEPAERALALKLLDFGATVVQVGDTLEPHRLCTYLF 523 Query: 656 SICEPIEIFFDQVLVN-VDDREVRDNRLSL 684 + + F++ V D EVR++RL+L Sbjct: 524 DLAQTFTAFYEACPVLKADRDEVRNSRLAL 553 >gi|332971382|gb|EGK10340.1| arginine--tRNA ligase [Desmospora sp. 8437] Length = 564 Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 1/101 (0%) Query: 592 SAKRIFQILAIEEKKNREISLEISP-QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + RI + ++ E+ L+ L EAE L +++F I + H++ Sbjct: 448 AHARINSVFRRAGEQGMEVKLDPDSLSALQEEAEFDLLQKLAEFPEEIATAAKQMAPHRM 507 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 L+ + ++ +++ V +D + RLSLL + + Sbjct: 508 VRYLYDLATQLQSYYNAYRVIQEDERLTRARLSLLLGVAQV 548 >gi|207111689|ref|ZP_03245851.1| hypothetical protein HpylH_21690 [Helicobacter pylori HPKX_438_CA4C1] Length = 41 Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 32/41 (78%) Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 V+L+ KLD+L + ++ + PSGSKDP+ALRR + G+++I+ Sbjct: 1 IVALSLKLDSLFSLFSTGKIPSGSKDPFALRRLSFGLLKIV 41 >gi|89897692|ref|YP_521179.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense Y51] gi|219670842|ref|YP_002461277.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] gi|122997116|sp|Q24MK7|SYR_DESHY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782959|sp|B8FZ89|SYR_DESHD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|89337140|dbj|BAE86735.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219541102|gb|ACL22841.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] Length = 561 Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 43/107 (40%), Gaps = 3/107 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEISP---QYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + R+ IL ++ + + L E+ L I++ I+ + H Sbjct: 443 AHARLCSILRQAAEQGYNTAGIPQEGELKRLQSNEERELLKKIAELPNEIEVAARLTEPH 502 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + + F++ V VD+ +R+ RL L++ K ++ V Sbjct: 503 RLARYVLDLAGLFHSFYNSQRVLVDEEGLREARLGLVRSTKQVLANV 549 >gi|15668412|ref|NP_247208.1| arginyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661] gi|2501049|sp|Q57689|SYR_METJA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|1590971|gb|AAB98223.1| arginyl-tRNA synthetase (argS) [Methanocaldococcus jannaschii DSM 2661] Length = 566 Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 4/98 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R IL E K + + + EK L ++ +F I+ES + +R H + Sbjct: 451 AHARCCSILKEAENKGVKDEAVFNYEL--TSEEKELIKMLDEFKDIIKESAESRRVHILA 508 Query: 652 DLLHSICEPIEIFFDQVLV-NVD-DREVRDNRLSLLQY 687 + L + + F+ + D +V+ +RL L++ Sbjct: 509 NYLLELAKAFNRFYANCPILMTKVDDDVKKSRLKLVKS 546 >gi|300709761|ref|YP_003735575.1| arginyl-tRNA synthetase [Halalkalicoccus jeotgali B3] gi|299123444|gb|ADJ13783.1| arginyl-tRNA synthetase [Halalkalicoccus jeotgali B3] Length = 582 Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 36/92 (39%) Query: 603 EEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIE 662 E + I P L E+ L VI F I+ + ++ HQ+ E Sbjct: 478 EAARAGHDPGRIDPALLDSPEERDLLEVIGRFPAVIESAATDRQPHQVATYTREFAETFN 537 Query: 663 IFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 F+ + V D ++ + RL+L+ ++ I Sbjct: 538 AFYRERQVISADEDLTEARLALVAGARHTIAN 569 >gi|222100449|ref|YP_002535017.1| Arginyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] gi|221572839|gb|ACM23651.1| Arginyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] Length = 549 Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 13/100 (13%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI---SDFGTHIQESMDHKRYH 648 + RI + EKK E L E E+ L + S + + R Sbjct: 433 AHARISNLFLNAEKKGVEFEQGKDLDLLGNEEERTLMRNLGMFSSALKEVAKMFAPNRLT 492 Query: 649 QIGDLLHSICEPIEIF--F--DQVLVNVDDREVRDNRLSL 684 +L F F V+V+ +++ + + RL+L Sbjct: 493 NYLQMLSE------SFHVFYTKHVIVDPENKALSNARLNL 526 >gi|56965653|ref|YP_177387.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16] gi|81364951|sp|Q5WB34|SYR_BACSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|56911899|dbj|BAD66426.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16] Length = 556 Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 41/97 (42%), Gaps = 1/97 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ IL E+ S + E E L I +F + E+ + +I Sbjct: 440 AHARVCSILRQGEELGIPYSANTDLSPIASEKEYELLKAIGEFPGAVAEAATKQIPQRIA 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQY 687 + + + + + F++ V +++++ RL+L++ Sbjct: 500 NYAYDLAQALHSFYNVTRVIDTENKDLSAARLALMKA 536 >gi|94500579|ref|ZP_01307110.1| arginyl-tRNA synthetase [Oceanobacter sp. RED65] gi|94427369|gb|EAT12348.1| arginyl-tRNA synthetase [Oceanobacter sp. RED65] Length = 607 Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 48/110 (43%), Gaps = 8/110 (7%) Query: 592 SAKRIFQILAIEEKKNRE---ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + RI IL E + + + L + EK L ++ F + + + H Sbjct: 489 AHARICSILRKLESEGQSWDQHNGLSKLDRLEEDQEKLLANKLARFPEVVAIAGEQSAPH 548 Query: 649 QIGDLLHSICEPIEIFFDQ--VLVNVDDREVRDNRLSLLQYIKN-IILIV 695 Q+ + LH + +++ +V +D+++RD R++L Q ++ + + Sbjct: 549 QVANYLHELASDFHGYYNNHKTIV--EDQDLRDARIALTQAVRQVLFNGL 596 >gi|227501367|ref|ZP_03931416.1| arginine--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227216466|gb|EEI81876.1| arginine--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 565 Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 3/93 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R +L K E + +++ + + E L +++F + ++ + I Sbjct: 453 TYARAKSVLR---KAGFEKAEKMNFTKITSDEEFALVKSLANFKDIVIKACEKYEPSLIT 509 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L I + F++ VNV+D+EV++ RL+L Sbjct: 510 RHLTEIAKNFNKFYNTCQVNVEDKEVKEERLAL 542 >gi|116671696|ref|YP_832629.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24] gi|116611805|gb|ABK04529.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24] Length = 585 Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 11/107 (10%) Query: 592 SAKRIFQILAIEE----------KKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 +A RI IL E + E + +S + AE+ L + ++G +++ Sbjct: 461 AAARIRSILRKAEAAASPAGEPGEAAGEPTAAVSIAV-VEPAERALALHLLEYGATLRKV 519 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + H++ L + + F+DQ V D VR +RL+L + Sbjct: 520 GELLEPHRLCAYLFELSQLFTSFYDQCPVLKADESVRQSRLALCALV 566 >gi|301156166|emb|CBW15637.1| arginyl-tRNA synthetase [Haemophilus parainfluenzae T3T1] Length = 577 Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 5/95 (5%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQY-LLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + RI I K N + + L E E+ L + F +Q H + Sbjct: 463 AYTRIRSIFN---KANVNPTALAEAKIQLSDEKERALAIKLLQFEEAVQTVGKEGTPHVL 519 Query: 651 GDLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N +D V+ +RL L Sbjct: 520 CAYLYELAGAFSSFYEHCPILNAEDENVKLSRLKL 554 >gi|281413077|ref|YP_003347156.1| arginyl-tRNA synthetase [Thermotoga naphthophila RKU-10] gi|281374180|gb|ADA67742.1| arginyl-tRNA synthetase [Thermotoga naphthophila RKU-10] Length = 546 Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 7/97 (7%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI---SDFGTHIQESMDHKRYH 648 + RI+ + + EKK + + L E E+ L + + + + R Sbjct: 430 AHARIYNLFSNAEKKGVKFEEGKHLELLGNEEERVLMRNLGMFNTVLKEVAQMFAPNRLT 489 Query: 649 QIGDLLHSICEPIEIFFDQ-VLVNVDDREVRDNRLSL 684 L E F+ + V+V+ ++ E+ + RL+L Sbjct: 490 NYLQSLA---ESFHAFYTKHVIVDPENPELSNARLNL 523 >gi|73540380|ref|YP_294900.1| methionyl-tRNA synthetase [Ralstonia eutropha JMP134] gi|123760249|sp|Q474X7|SYM_RALEJ RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|72117793|gb|AAZ60056.1| methionyl-tRNA synthetase [Ralstonia eutropha JMP134] Length = 688 Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats. Identities = 6/68 (8%), Positives = 20/68 (29%), Gaps = 5/68 (7%) Query: 598 QIL-AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 I + ++ L L + + + + + + Y + L+ Sbjct: 395 NIASRAAGFLVKRFEGKVDEAALAHP----LLKQLREAAPQVAQLYEAREYSKALRLVME 450 Query: 657 ICEPIEIF 664 + + + F Sbjct: 451 LTDTVNAF 458 >gi|145639894|ref|ZP_01795494.1| arginyl-tRNA synthetase [Haemophilus influenzae PittII] gi|145270985|gb|EDK10902.1| arginyl-tRNA synthetase [Haemophilus influenzae PittII] Length = 581 Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I + + + P + + E+ L + F +Q H + Sbjct: 463 AYTRIRSIFNKTDINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQTVGKEGTPHVLC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N +D V+ +RL L Sbjct: 521 AYLYELAGIFSSFYEHCPILNAEDEAVKLSRLKL 554 >gi|148270771|ref|YP_001245231.1| arginyl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|166200584|sp|A5IN82|SYR_THEP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|147736315|gb|ABQ47655.1| arginyl-tRNA synthetase [Thermotoga petrophila RKU-1] Length = 546 Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 7/97 (7%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI---SDFGTHIQESMDHKRYH 648 + RI+ + + EKK + + L E E+ L + + + + R Sbjct: 430 AHARIYNLFSNAEKKGVKFEEGKHLELLGNEEERVLMRNLGMFNTVLKEVAQMFAPNRLT 489 Query: 649 QIGDLLHSICEPIEIFFDQ-VLVNVDDREVRDNRLSL 684 L E F+ + V+V+ ++ E+ + RL+L Sbjct: 490 NYLQSLA---ESFHAFYTKHVIVDPENPELSNARLNL 523 >gi|289581095|ref|YP_003479561.1| arginyl-tRNA synthetase [Natrialba magadii ATCC 43099] gi|289530648|gb|ADD04999.1| arginyl-tRNA synthetase [Natrialba magadii ATCC 43099] Length = 600 Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 34/98 (34%), Gaps = 18/98 (18%) Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA + I L AE+ L I+ F + E+ HQI E Sbjct: 491 LAAAGQAESLDLDAIDADLLETPAEQDLLETIARFPAVVDEAASDLEPHQIATY---TRE 547 Query: 660 PIEIF--F--------DQVLVNVDDREVRDNRLSLLQY 687 + F F D V D EVR+ RL+L+ Sbjct: 548 FGDRFNTFYRECPVLADDV-----DPEVRETRLALVAA 580 >gi|309751074|gb|ADO81058.1| Arginyl-tRNA synthetase [Haemophilus influenzae R2866] Length = 577 Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I + + + P + + E+ L + F +Q H + Sbjct: 463 AYTRIRSIFNKTDINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQTVGKEGTPHVLC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N +D V+ +RL L Sbjct: 521 AYLYELAGIFSSFYEHCPILNAEDEAVKLSRLKL 554 >gi|269216290|ref|ZP_06160144.1| arginine--tRNA ligase [Slackia exigua ATCC 700122] gi|269130549|gb|EEZ61627.1| arginine--tRNA ligase [Slackia exigua ATCC 700122] Length = 601 Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 34/94 (36%), Gaps = 12/94 (12%) Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 I ++ L E+E L +S+FG + + + ++ + F+ Sbjct: 503 IPADVDLSLLTEESELALMRKMSEFGDLVALAARDRAPFRLTHYAQELAGMFHQFYTNCP 562 Query: 670 VN-VDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 V +D ++ RL+L + +IV Sbjct: 563 VLKAEDESLKQARLAL-----------ADATRIV 585 >gi|242208461|ref|XP_002470081.1| predicted protein [Postia placenta Mad-698-R] gi|220730833|gb|EED84684.1| predicted protein [Postia placenta Mad-698-R] Length = 3369 Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 44/161 (27%), Gaps = 21/161 (13%) Query: 503 YALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 LR + R I + +L+ R + +D+ + + + + Sbjct: 2248 LRLRTNAASLTRSIHDANHPHD--HLQNHTDLVRVHVPRFTVSANDQHFQF-ISNIVTKL 2304 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA----------------IEEKK 606 + + D L + S +A + + A Sbjct: 2305 ILFSDAALKDRADKLEKMLFSYDFTNLASAADVVANMQARLRHALETRREAVQRLQGFGD 2364 Query: 607 NREISL-EISPQYLLLEAEKRL-YAVISDFGTHIQESMDHK 645 + ++ + +I LL E L + I E + K Sbjct: 2365 DGKVEVYKIDAHIFLLADELNLIFDAIKLAQDKANEGSEQK 2405 >gi|94989021|ref|YP_597122.1| hypothetical protein MGAS9429_Spy1390 [Streptococcus pyogenes MGAS9429] gi|94992912|ref|YP_601011.1| hypothetical protein MGAS2096_Spy1414 [Streptococcus pyogenes MGAS2096] gi|94542529|gb|ABF32578.1| hypothetical protein MGAS9429_Spy1390 [Streptococcus pyogenes MGAS9429] gi|94546420|gb|ABF36467.1| hypothetical protein MGAS2096_Spy1414 [Streptococcus pyogenes MGAS2096] Length = 240 Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 40/133 (30%), Gaps = 22/133 (16%) Query: 545 YLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE 604 D+ +H A L + +K +N+ A + K + ++ + Sbjct: 45 QTQDKVAKHSKSAASL---------LKKAVKAVNDADRLATAAAIQEAQKAVDKLAESSK 95 Query: 605 KKNREISLEISPQYLLLE---------AEKRLYAVISDFGTHIQESMDHKRYHQIG---- 651 KK + L ++ E AE+ L + D + +K Sbjct: 96 KKTLQEQLNVAKAKQEQEDAATQAVKAAEETLNQNLKDIAQKAVNDLSNKGKKAALQSRL 155 Query: 652 DLLHSICEPIEIF 664 D + I+ F Sbjct: 156 DAILPAKPIIDEF 168 >gi|290997027|ref|XP_002681083.1| predicted protein [Naegleria gruberi] gi|284094706|gb|EFC48339.1| predicted protein [Naegleria gruberi] Length = 526 Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 53/142 (37%), Gaps = 6/142 (4%) Query: 525 LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 L++ + + K++ ++ + ++R ++ + L S Sbjct: 91 LTKIKSPDMVRETITEIGKIFTKEK-WENHFYMNVIRKLREDPSDASKRVLKLIISEQSN 149 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + E + + I+ ++E++N ++S I + L + Y+ ++ I ++ Sbjct: 150 RFESLKGLFQFVNNIMILKEQENFQVSASIFLEMLKVN-----YSHVNWLLIGINALINC 204 Query: 645 KRYHQIGDLLHSICEPIEIFFD 666 Y D L ++ + + D Sbjct: 205 YNYEMNVDALKTLENILNDYID 226 >gi|165933747|ref|YP_001650536.1| hypothetical protein RrIowa_1396 [Rickettsia rickettsii str. Iowa] gi|165908834|gb|ABY73130.1| hypothetical protein RrIowa_1396 [Rickettsia rickettsii str. Iowa] Length = 359 Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 9/152 (5%) Query: 519 NKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHL 577 ++ +S E L ++ + R + +++ + + I + L Sbjct: 48 YGLNFDISNLKETAETKLKHYEVEQSIEKARVQEEEFLKSQRARKLAEEEKEIAQRVAAL 107 Query: 578 N----EFFS--SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 N EF + ++ S KR+ +I+ EK+N E++ + L E +L Sbjct: 108 NNLHNEFIKNITKDTKRIAESNKRLDKIINKLEKENIIDHEELNREILTHEEIFKLNQAY 167 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 + ++ + Q L+ + + I Sbjct: 168 KVLHKNHKKITEEH--KQAHTELNELNKTITN 197 >gi|159902746|ref|YP_001550090.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] gi|238687135|sp|A9BDF0|SYR_PROM4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|159887922|gb|ABX08136.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] Length = 603 Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 4/104 (3%) Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L + RI I +K ++ I+ E L + F I + + + Sbjct: 489 LLYALVRIAGI----NRKGGSLNATINKLTFNEPQEWMLARELLKFDEVILQVEEELLPN 544 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + L + + F+DQV V + ++ +RL+L Q + I Sbjct: 545 RLCNYLFELSQVFNRFYDQVPVLKANDSLKASRLALCQLTADTI 588 >gi|182437971|ref|YP_001825690.1| arginyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|238688989|sp|B1VTB7|SYR_STRGG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|178466487|dbj|BAG21007.1| putative arginyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 594 Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL + P+ L AE+ L + FG + E H++ Sbjct: 481 AYARIRSILRKA----GDAVPAAHPELELAPAERALGLHLDQFGEVLAEVGTGYEPHKLA 536 Query: 652 DLLHSICEPIEIFFDQVLVNVDD--REVRDNRLSL 684 L+ + + F+DQ V D EV +NRL L Sbjct: 537 AYLYQLASHLTTFYDQCQVLSPDNAPEVVENRLFL 571 >gi|323702604|ref|ZP_08114266.1| arginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] gi|323532423|gb|EGB22300.1| arginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] Length = 561 Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 2/100 (2%) Query: 592 SAKRIFQILAI--EEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + RI IL E+ + + ++ L EAE L ++DF T I + + H+ Sbjct: 444 AHARICSILRQLQEQGRQLPAAADVDLTLLKEEAELGLLRKLADFPTEIAAAAELLAPHR 503 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I LH + F++ V D+ E+ RL L+ ++ Sbjct: 504 IARYLHDLAGQFHSFYNSYRVITDNEELSQARLVLVNCVR 543 >gi|318040673|ref|ZP_07972629.1| arginyl-tRNA synthetase [Synechococcus sp. CB0101] Length = 597 Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 4/105 (3%) Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQY-LLLEAEKRLYAVISDFGTHIQESMDHKRY 647 L + RI I S+ I E L + F I E + Sbjct: 479 LLYAVVRIAGIARKGGDLEGS-SVPIDQPLSFHEPQEWALVRELLKFDAVIAEVEEELLP 537 Query: 648 HQIGDLLHSICEPIEIFFDQVLVN-VDDREVRDNRLSLLQYIKNI 691 +++ L + + F+DQV V D+ R +RL+L + N Sbjct: 538 NRLCTYLFELSQVFNRFYDQVPVLKADEPA-RASRLALCRLTANT 581 >gi|254786923|ref|YP_003074352.1| methionyl-tRNA synthetase [Teredinibacter turnerae T7901] gi|237684917|gb|ACR12181.1| methionine--tRNA ligase [Teredinibacter turnerae T7901] Length = 678 Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 38/128 (29%), Gaps = 14/128 (10%) Query: 537 FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 F + R L D + + L D+L +L +F S + Sbjct: 344 FINARTYLKHLDPEYLRYYYASKLTNSVDDLDL------NLEDFISRVNSDLVGKVVNIA 397 Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 + K +S + AE L+ + I +++ Y + + + Sbjct: 398 SRTAKFVAKSGGTLSAVV--------AEPALWEKFTAAEQSIASHYENREYGKAMREIMA 449 Query: 657 ICEPIEIF 664 + + + Sbjct: 450 LADAANEY 457 >gi|163848209|ref|YP_001636253.1| metal dependent phophohydrolase [Chloroflexus aurantiacus J-10-fl] gi|222526117|ref|YP_002570588.1| metal dependent phosphohydrolase [Chloroflexus sp. Y-400-fl] gi|163669498|gb|ABY35864.1| metal dependent phophohydrolase [Chloroflexus aurantiacus J-10-fl] gi|222449996|gb|ACM54262.1| metal dependent phosphohydrolase [Chloroflexus sp. Y-400-fl] Length = 185 Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 7/101 (6%) Query: 386 QGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQ 445 + + + R +A AD RA +L D + G I A Sbjct: 28 KHDHLMRSVHFSYYLAPFFGADQVTCVRAALLHDLDSRYGTLT----THGAIAARIAAEL 83 Query: 446 NENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTL 486 E + AI H+ P GP PT + +++ADKL +L Sbjct: 84 GEPEAVSAAIVSHMYPFGPR---PTTREGWVLAVADKLASL 121 >gi|256394710|ref|YP_003116274.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] gi|256360936|gb|ACU74433.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] Length = 619 Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 4/97 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL K I +L AE++L + DFG + ++ H++ Sbjct: 506 AHARIHSILR---KLPPGTPARIHTDLVLEPAERKLALHLDDFGATLATVTENFEPHRLA 562 Query: 652 DLLHSICEPIEIFFDQVLVN-VDDREVRDNRLSLLQY 687 L+++ + F++ V VR+NR +L+Q Sbjct: 563 TYLYALAQTFSDFYENCPVLKAPTDAVRENRAALVQL 599 >gi|157829023|ref|YP_001495265.1| hypothetical protein A1G_06520 [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801504|gb|ABV76757.1| hypothetical protein A1G_06520 [Rickettsia rickettsii str. 'Sheila Smith'] Length = 356 Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 9/152 (5%) Query: 519 NKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHL 577 ++ +S E L ++ + R + +++ + + I + L Sbjct: 45 YGLNFDISNLKETAETKLKHYEVEQSIEKARVQEEEFLKSQRARKLAEEEKEIAQRVAAL 104 Query: 578 N----EFFS--SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 N EF + ++ S KR+ +I+ EK+N E++ + L E +L Sbjct: 105 NNLHNEFIKNITKDTKRIAESNKRLDKIINKLEKENIIDHEELNREILTHEEIFKLNQAY 164 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 + ++ + Q L+ + + I Sbjct: 165 KVLHKNHKKITEEH--KQAHTELNELNKTITN 194 >gi|149182460|ref|ZP_01860935.1| arginyl-tRNA synthetase [Bacillus sp. SG-1] gi|148849853|gb|EDL64028.1| arginyl-tRNA synthetase [Bacillus sp. SG-1] Length = 556 Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 41/104 (39%), Gaps = 1/104 (0%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL ++ L E L + DF + ++ + H++ Sbjct: 440 AHARICSILRQAAEQGINFEEGTDYSLLKAEKTIELLKKLGDFPGVVADAAAKRTPHRVA 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQYIKNIILI 694 + ++ + F++ V ++ E+ RLSL++ ++ + Sbjct: 500 NYINELASTFHSFYNAEKVLDMENMELTKARLSLIKAVRLTMKN 543 >gi|268323984|emb|CBH37572.1| arginyl-tRNA synthetase [uncultured archaeon] Length = 558 Score = 40.0 bits (92), Expect = 1.6, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 18/112 (16%) Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA---VISDFGTHIQESMDHKRYHQIG 651 R IL K + L ++E L + + R + Sbjct: 446 RACSILRAAAAKGVLSDDDYDSALLREDSELELIKMLSKFDYLIAGVASDLKPHRIAKYA 505 Query: 652 DLLHSICEPIEIFFD------QVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 L +F+ VL N D E R RL+L+ + ++ V++ Sbjct: 506 RELAE-------YFNLFYRYCPVL-NA-DEEHRKARLALVDCARVVLSNVLD 548 >gi|325578263|ref|ZP_08148398.1| arginine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] gi|325159999|gb|EGC72128.1| arginine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] Length = 577 Score = 39.6 bits (91), Expect = 1.6, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 3/94 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I + ++ L E E+ L + F +Q H + Sbjct: 463 AYTRIRSIFNKADVNPTALAEA--KIQLSDEKERALAIKLLQFEEAVQTVGKEGTPHVLC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N +D V+ +RL L Sbjct: 521 AYLYELAGIFSSFYEHCPILNAEDENVKLSRLKL 554 >gi|289193278|ref|YP_003459219.1| arginyl-tRNA synthetase [Methanocaldococcus sp. FS406-22] gi|288939728|gb|ADC70483.1| arginyl-tRNA synthetase [Methanocaldococcus sp. FS406-22] Length = 566 Score = 39.6 bits (91), Expect = 1.6, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 4/98 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R IL E K + + + EK L ++ +F I+ES ++++ H + Sbjct: 451 AHARCCSILKEAENKGVKDEAVFNYEL--TNEEKELIKMLDEFKDIIKESAENRKVHVLA 508 Query: 652 DLLHSICEPIEIFFDQVLV-NVD-DREVRDNRLSLLQY 687 + L + + F+ + D V+ +RL L++ Sbjct: 509 NYLLELAKVFNRFYANCPILMTKVDDNVKKSRLKLVKS 546 >gi|281425987|ref|ZP_06256900.1| arginine--tRNA ligase [Prevotella oris F0302] gi|281399880|gb|EFB30711.1| arginine--tRNA ligase [Prevotella oris F0302] Length = 641 Score = 39.6 bits (91), Expect = 1.6, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 1/104 (0%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL E +N + +S + L E E +L +++FG ++++ I Sbjct: 525 TYARIRSILRKAEAENIAVPTTLSTEAPLNEKEIQLIQKLNEFGAAVEQAGKDYSPSGIA 584 Query: 652 DLLHSICEPIEIFF-DQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + + + F+ D ++N D + RL L + + +I Sbjct: 585 NYCYELTKDFNQFYHDYSILNADTETEKITRLMLAKNVAKVIKN 628 >gi|261368273|ref|ZP_05981156.1| arginine--tRNA ligase [Subdoligranulum variabile DSM 15176] gi|282569790|gb|EFB75325.1| arginine--tRNA ligase [Subdoligranulum variabile DSM 15176] Length = 585 Score = 39.6 bits (91), Expect = 1.7, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 41/106 (38%), Gaps = 2/106 (1%) Query: 592 SAKRIFQILAIEEKKNREISL--EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + RI +L E++ I L +E+ L +++ F I + D + Sbjct: 468 AHARICSLLKKLEEQGVAFQGVDSIDASVLTDPSEQALIRLLAAFPAEIVAAADKYDPAR 527 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 I + F++ + + V+ NR++L ++ +I + Sbjct: 528 ITRYCIDVATAFHRFYNACRILDAEGAVQQNRIALSLAVRGVIHNI 573 >gi|254446754|ref|ZP_05060229.1| arginyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] gi|198256179|gb|EDY80488.1| arginyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] Length = 584 Score = 39.6 bits (91), Expect = 1.7, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 58/197 (29%), Gaps = 27/197 (13%) Query: 497 SGSKDPYALRRATLGIIR----IILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIR 552 S S DP LR+ + I+ E +P + +I + +R Sbjct: 389 SRSGDPIRLRQLIDEAVERAAKIVREKNATLPEDEIKHIAEVIGVNAIKYADLSQNRTSD 448 Query: 553 H--DLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI 610 + + + N + RI I + ++ Sbjct: 449 YIFTWEKLLSFEGNTAPYLLYAAA--------------------RIQSIFRKLDT-DQLA 487 Query: 611 SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 LE E L I F +Q +++ R H + L + F+ V Sbjct: 488 DLESKATPFETPEEIALANKIIAFVGVLQSTIEQLRPHLLCTYLFELAGAYSSFYSANKV 547 Query: 671 NVDDREVRDNRLSLLQY 687 V + +V+ RL L Q Sbjct: 548 IVSESDVQARRLLLCQR 564 >gi|225017221|ref|ZP_03706413.1| hypothetical protein CLOSTMETH_01147 [Clostridium methylpentosum DSM 5476] gi|224949996|gb|EEG31205.1| hypothetical protein CLOSTMETH_01147 [Clostridium methylpentosum DSM 5476] Length = 562 Score = 39.6 bits (91), Expect = 1.8, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 35/104 (33%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL ++ + L E L I+ I E+ +I Sbjct: 447 AHARICSILKKLAQEGFSPQEDADFGLLTAPEEIELIRHIARLPGDIVEAAKAYDPARIT 506 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + F++ V DD + RL+L ++ ++ V Sbjct: 507 RYSLDLATLFHKFYNACKVKGDDERLTTARLTLCDAVRTVLENV 550 >gi|227355376|ref|ZP_03839777.1| arginyl-tRNA synthetase [Proteus mirabilis ATCC 29906] gi|227164600|gb|EEI49471.1| arginyl-tRNA synthetase [Proteus mirabilis ATCC 29906] Length = 576 Score = 39.6 bits (91), Expect = 1.9, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 4/94 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ I E ++ IS L EK+L + F I + H + Sbjct: 463 AYTRVASIFKRAEIDESALTQPIS---LTQPHEKQLALRLVQFDETITQVAREGTPHVMC 519 Query: 652 DLLHSICEPIEIFFDQVLVN-VDDREVRDNRLSL 684 L+ + + F++ + +D VR +RL L Sbjct: 520 AYLYDLAQSFSGFYENCPILSAEDDNVRQSRLKL 553 >gi|163847584|ref|YP_001635628.1| arginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222525439|ref|YP_002569910.1| arginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] gi|229558751|sp|A9WEH7|SYR_CHLAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782952|sp|B9LGY2|SYR_CHLSY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|163668873|gb|ABY35239.1| arginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222449318|gb|ACM53584.1| arginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] Length = 574 Score = 39.6 bits (91), Expect = 2.0, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 20/110 (18%) Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES--------MDHKR 646 R IL ++ +S E+ P L +E+RL ++ ++E+ + Sbjct: 462 RCRSILRRAAEEGM-LSTEVDPGLLTHPSEQRLVRHLARLPEAVREAGARYAPFVIADWC 520 Query: 647 YHQIGDLLHSICEP-IEIFFDQVLVN-VDDREVRDNRLSLLQYIKNIILI 694 Y E I FF+Q V + +R RL L+ N + Sbjct: 521 YTTA-------REFGI--FFEQCPVLRAETPALRAARLQLVSATANALRN 561 >gi|327441472|dbj|BAK17837.1| arginyl-tRNA synthetase [Solibacillus silvestris StLB046] Length = 555 Score = 39.6 bits (91), Expect = 2.1, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 2/104 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL ++ E SLE + L+ E E+ + + F + ++ H+ H+I Sbjct: 440 AHARISSILRAANEQGFEASLE-NLNLLVAEKEEDVLKKVGAFPQIVADAAKHRTPHRIA 498 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSLLQYIKNIILI 694 + + + F++ V N D++E+ + RL+L+ +K + Sbjct: 499 NYIQDLAAAFHSFYNAEKVLNQDNKELTEARLALITAVKTTLAN 542 >gi|254495636|ref|ZP_05108558.1| arginyl-tRNA synthetase [Legionella drancourtii LLAP12] gi|254355206|gb|EET13819.1| arginyl-tRNA synthetase [Legionella drancourtii LLAP12] Length = 586 Score = 39.6 bits (91), Expect = 2.1, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 46/110 (41%), Gaps = 3/110 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEI---SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + RI +L +++ I + L E L A+I + ++ S H Sbjct: 468 AHARICSVLRQLKERGLLWDKAIGLENVHLLDQPHETALIALICRYPEVVELSASSCEPH 527 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 QI L + + +++ V + + ++R RL LL ++ ++ +++ Sbjct: 528 QIAYYLRELANGLHSYYNAVQLLCEQEQLRCARLCLLAAVRQVLSNGLDL 577 >gi|117617648|ref|YP_858536.1| arginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559055|gb|ABK36003.1| arginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 581 Score = 39.2 bits (90), Expect = 2.2, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 33/109 (30%), Gaps = 19/109 (17%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I +S + L EAE+ L + F + D H + Sbjct: 467 AYTRIQSIFRKAGVDADTLSGHV---ILNEEAEEVLAQKLIQFSDAVNGVADKGMPHLLC 523 Query: 652 DLLHSICE---------PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 L+ + PI D V D R +RL L + Sbjct: 524 TYLYELSGNFMTFYEACPINK--DGV-----DEATRQSRLLLCAATAKV 565 >gi|148828426|ref|YP_001293179.1| arginyl-tRNA synthetase [Haemophilus influenzae PittGG] gi|166232792|sp|A5UJ40|SYR_HAEIG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148719668|gb|ABR00796.1| arginyl-tRNA synthetase [Haemophilus influenzae PittGG] Length = 577 Score = 39.2 bits (90), Expect = 2.2, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 78/225 (34%), Gaps = 17/225 (7%) Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 ++ S + + W I K D ++L G++ I+ + Sbjct: 333 ALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTIKLAD 392 Query: 534 LILFFHDRLKLYLHDRDIR--HDLIEAIL------RPENDNLLTIVDLIKHLNEFFSSAK 585 L+ +R + +++++ +D EA++ + +L ++ ++ + Sbjct: 393 LLDEAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSK-NRTTDYVFDWDNMLS 451 Query: 586 GEKFLL-----SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 E + RI I + + + P + + E+ L + F +Q Sbjct: 452 FEGNTAPYMQYAYTRIRSIFNKTDINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQT 509 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 H + L+ + F++ + N +D ++ +RL L Sbjct: 510 VGKEGTPHVLCAYLYELAGIFSSFYEHCPILNAEDESIKLSRLKL 554 >gi|46126471|ref|XP_387789.1| hypothetical protein FG07613.1 [Gibberella zeae PH-1] Length = 1273 Score = 39.2 bits (90), Expect = 2.2, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 41/144 (28%), Gaps = 39/144 (27%) Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE------ISLEIS----PQYLL--LEAE 624 + + +A L + IL + + IS + P E Sbjct: 489 VTDVIKTANLSSLL-----VGNILRLFNLDEDDSVVLPYISQVVKTYELPNLFKRMTIEE 543 Query: 625 -KRLYAVISDFGTHIQESMDHKRYHQIGDLLHS-ICEPIEIF---------------FDQ 667 K + I+ +Q + ++ L + ++ FD Sbjct: 544 IKNMLDDITAVVPQLQALLSENDLQRLSRKLIETLSSKVDKLMGPMRKKYAEYLTTEFD- 602 Query: 668 VLVNVDDREVRDNRLSLLQYIKNI 691 +N + V+ NR +L ++ Sbjct: 603 --INDKESVVKKNR--MLGELRKT 622 >gi|145637830|ref|ZP_01793478.1| arginyl-tRNA synthetase [Haemophilus influenzae PittHH] gi|145268973|gb|EDK08928.1| arginyl-tRNA synthetase [Haemophilus influenzae PittHH] Length = 577 Score = 39.2 bits (90), Expect = 2.2, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 78/225 (34%), Gaps = 17/225 (7%) Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 ++ S + + W I K D ++L G++ ++ + Sbjct: 333 ALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLAD 392 Query: 534 LILFFHDRLKLYLHDRDIR--HDLIEAIL------RPENDNLLTIVDLIKHLNEFFSSAK 585 L+ +R + +++++ +D EA++ + +L ++ ++ + Sbjct: 393 LLDEAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSK-NRTTDYVFDWDNMLS 451 Query: 586 GEKFLL-----SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 E + RI I + + + P + + E+ L + F +Q Sbjct: 452 FEGNTAPYMQYAYTRIRSIFNKTDINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQT 509 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 H + L+ + F++ + N +D ++ +RL L Sbjct: 510 VGKEGTPHVLCAYLYELAGIFSSFYEHCPILNAEDESIKLSRLKL 554 >gi|70727292|ref|YP_254208.1| arginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|109895040|sp|Q4L425|SYR_STAHJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|68448018|dbj|BAE05602.1| arginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] Length = 553 Score = 39.2 bits (90), Expect = 2.3, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 44/98 (44%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ E++ + + E L +++F I+ + +++ H++ Sbjct: 438 AHARICSILKQAKEQGVEVTADADFSTITNEKAIDLLKKVAEFEPTIESAAENRAPHRLT 497 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + + F++ V DD E ++L+ ++ Sbjct: 498 NYIQDLASAFHKFYNAEKVLTDDAEKTKAHIALVDAVR 535 >gi|51891157|ref|YP_073848.1| arginyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] gi|81389886|sp|Q67TI9|SYR_SYMTH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|51854846|dbj|BAD39004.1| arginyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] Length = 558 Score = 39.2 bits (90), Expect = 2.3, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 5/71 (7%) Query: 592 SAKRIFQILAIEEKKNREISL--EISPQYLLLEAEKRLYAVISDFGTHIQESMDHK---R 646 + RI IL ++ E+ E+ L E+E L +++F I + D + R Sbjct: 441 AHARICSILRQAREQGLEVPAASEVDTALLADESEVELMRKLAEFPEEIIGAADAREVHR 500 Query: 647 YHQIGDLLHSI 657 + + L ++ Sbjct: 501 IPRYLNELATL 511 >gi|301170344|emb|CBW29950.1| arginyl-tRNA synthetase [Haemophilus influenzae 10810] Length = 577 Score = 39.2 bits (90), Expect = 2.3, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 78/225 (34%), Gaps = 17/225 (7%) Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 ++ S + + W I K D ++L G++ ++ + Sbjct: 333 ALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLAD 392 Query: 534 LILFFHDRLKLYLHDRDIR--HDLIEAIL------RPENDNLLTIVDLIKHLNEFFSSAK 585 L+ +R + +++++ +D EA++ + +L ++ ++ + Sbjct: 393 LLDEAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSK-NRTTDYVFDWDNMLS 451 Query: 586 GEKFLL-----SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 E + RI I + + + P + + E+ L + F +Q Sbjct: 452 FEGNTAPYMQYAYTRIRSIFNKTDINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQT 509 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 H + L+ + F++ + N +D ++ +RL L Sbjct: 510 VGKEGTPHVLCAYLYELAGIFSSFYEHCPILNAEDESIKLSRLKL 554 >gi|113868900|ref|YP_727389.1| methionyl-tRNA synthetase [Ralstonia eutropha H16] gi|122946656|sp|Q0K7K0|SYM_RALEH RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|113527676|emb|CAJ94021.1| Methionyl-tRNA synthetase [Ralstonia eutropha H16] Length = 686 Score = 39.2 bits (90), Expect = 2.3, Method: Composition-based stats. Identities = 6/68 (8%), Positives = 18/68 (26%), Gaps = 5/68 (7%) Query: 598 QIL-AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 I + ++ L L + + + + Y + L+ Sbjct: 395 NIASRAAGFLVKRFEGKVDEAALAHP----LLEQLRQAAPQVAHLYEAREYSKALRLVME 450 Query: 657 ICEPIEIF 664 + + + F Sbjct: 451 LTDAVNAF 458 >gi|16273477|ref|NP_439728.1| arginyl-tRNA synthetase [Haemophilus influenzae Rd KW20] gi|260580361|ref|ZP_05848190.1| arginyl-tRNA synthetase [Haemophilus influenzae RdAW] gi|1174541|sp|P43832|SYR_HAEIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|1574424|gb|AAC23231.1| arginyl-tRNA synthetase (argS) [Haemophilus influenzae Rd KW20] gi|260093038|gb|EEW76972.1| arginyl-tRNA synthetase [Haemophilus influenzae RdAW] Length = 577 Score = 39.2 bits (90), Expect = 2.3, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 78/225 (34%), Gaps = 17/225 (7%) Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 ++ S + + W I K D ++L G++ ++ + Sbjct: 333 ALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLAD 392 Query: 534 LILFFHDRLKLYLHDRDIR--HDLIEAIL------RPENDNLLTIVDLIKHLNEFFSSAK 585 L+ +R + +++++ +D EA++ + +L ++ ++ + Sbjct: 393 LLDEAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSK-NRTTDYVFDWDNMLS 451 Query: 586 GEKFLL-----SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 E + RI I + + + P + + E+ L + F +Q Sbjct: 452 FEGNTAPYMQYAYTRIRSIFNKTDINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQT 509 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 H + L+ + F++ + N +D ++ +RL L Sbjct: 510 VGKEGTPHVLCAYLYELAGIFSSFYEHCPILNAEDESIKLSRLKL 554 >gi|332981191|ref|YP_004462632.1| arginyl-tRNA synthetase [Mahella australiensis 50-1 BON] gi|332698869|gb|AEE95810.1| arginyl-tRNA synthetase [Mahella australiensis 50-1 BON] Length = 565 Score = 39.2 bits (90), Expect = 2.4, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 3/93 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R ILA K + I+ E+ L + L +++ F I+ + + Sbjct: 453 AHARAMSILA---KATQTITGEMGGDLLTEDETLELIDLLARFPEAIEAACQANEPSIVA 509 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 I + F+ +V V+D E++ RL+L Sbjct: 510 RHTIDIAQAFNKFYKNHMVIVEDDELQRARLTL 542 >gi|319776477|ref|YP_004138965.1| arginyl-tRNA synthetase [Haemophilus influenzae F3047] gi|329123983|ref|ZP_08252530.1| arginine--tRNA ligase [Haemophilus aegyptius ATCC 11116] gi|317451068|emb|CBY87301.1| arginyl-tRNA synthetase [Haemophilus influenzae F3047] gi|327467408|gb|EGF12906.1| arginine--tRNA ligase [Haemophilus aegyptius ATCC 11116] Length = 577 Score = 39.2 bits (90), Expect = 2.4, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I + + + P + + E+ L + F +Q H + Sbjct: 463 AYTRIRSIFNKTDINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQTVGKEGTPHVLC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N +D ++ +RL L Sbjct: 521 AYLYELAGIFSSFYEHCPILNAEDESIKLSRLKL 554 >gi|319897254|ref|YP_004135449.1| arginyl-tRNA synthetase [Haemophilus influenzae F3031] gi|317432758|emb|CBY81123.1| arginyl-tRNA synthetase [Haemophilus influenzae F3031] Length = 577 Score = 39.2 bits (90), Expect = 2.4, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I + + + P + + E+ L + F +Q H + Sbjct: 463 AYTRIRSIFNKTDINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQTVGKEGTPHVLC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N +D ++ +RL L Sbjct: 521 AYLYELAGIFSSFYEHCPILNAEDESIKLSRLKL 554 >gi|198282489|ref|YP_002218810.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665719|ref|YP_002424679.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] gi|226701628|sp|B7J3R6|SYR_ACIF2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238689961|sp|B5EL87|SYR_ACIF5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|198247010|gb|ACH82603.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517932|gb|ACK78518.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 579 Score = 39.2 bits (90), Expect = 2.5, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 2/105 (1%) Query: 592 SAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + R++ +L +K + + + L E L + F + + + HQ Sbjct: 462 AHARVYSLLRQSVEKGLSLPPADGVGLEILQESREIALADALWRFPEVVATAARDREPHQ 521 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I L + +++ + V++ +R RL+L + I Sbjct: 522 IAFYLRELAAAFHTYYNSTRILVEETPLRHARLTLCLAVAQSIAN 566 >gi|294494696|ref|YP_003541189.1| arginyl-tRNA synthetase [Methanohalophilus mahii DSM 5219] gi|292665695|gb|ADE35544.1| arginyl-tRNA synthetase [Methanohalophilus mahii DSM 5219] Length = 567 Score = 39.2 bits (90), Expect = 2.5, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 20/101 (19%) Query: 595 RIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH--------- 644 R IL ++ + + + +P L E+E L I+ F ++++ D Sbjct: 453 RASSILKKAGEEGIWDPASKPNPSVLTDESEITLIKQIALFDKVLKQAADDLKPHIIAIY 512 Query: 645 -KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + + + + + E+R+ RL L Sbjct: 513 GRELADAFNQFYRFSPVLG---------AETEELRNARLGL 544 >gi|39932107|sp|Q7VP38|SYR_HAEDU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|33147727|gb|AAP95249.1| arginyl-tRNA synthetase [Haemophilus ducreyi 35000HP] Length = 561 Score = 39.2 bits (90), Expect = 2.5, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 5/94 (5%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I A E ++ E+ L E E+ L + F + H + Sbjct: 449 AYTRIRSIFARAEIDPDTLTGEMQ---LTEEKERTLALKLLQFEEALTAVAKEGMPHILC 505 Query: 652 DLLHSICEPIEIFFDQV-LVNVDDREVRDNRLSL 684 L+ + F++ ++N D ++ +RL L Sbjct: 506 QYLYELAGIFSSFYEACPMLNA-DEAIKHSRLRL 538 >gi|239636782|ref|ZP_04677784.1| arginyl-tRNA synthetase [Staphylococcus warneri L37603] gi|239598137|gb|EEQ80632.1| arginyl-tRNA synthetase [Staphylococcus warneri L37603] Length = 553 Score = 39.2 bits (90), Expect = 2.5, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 45/100 (45%) Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 RI IL +++ +IS ++ + E L +++F I+ + D + H++ + + Sbjct: 441 RICSILKQAKEQGIDISTDVDFSKITNEKAIELLKKVAEFEPTIESAADSRAPHRMTNYI 500 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + F++ V DD E ++L++ ++ + Sbjct: 501 QDLASHFHKFYNAEKVLTDDIEKTKAHIALVEAVRITLNN 540 >gi|145300256|ref|YP_001143097.1| DNA mismatch repair protein [Aeromonas salmonicida subsp. salmonicida A449] gi|166231102|sp|A4SR27|MUTL_AERS4 RecName: Full=DNA mismatch repair protein mutL gi|142853028|gb|ABO91349.1| DNA mismatch repair protein MutL [Aeromonas salmonicida subsp. salmonicida A449] Length = 627 Score = 39.2 bits (90), Expect = 2.5, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 5/66 (7%) Query: 22 AEDLSIILIGLLKEEGVIYQNMRQYWTPHR-LFLYLKGLSPHSPEKIEERLGPRVGAGKK 80 A L+ +L L E+G+ ++ + + T +R L + S + R V + Sbjct: 563 ASQLAEVLCQWLVEQGISHEKIYDFSTANRLLTELVADFSDQLADIRMVR---PV-SLTT 618 Query: 81 AIDGFL 86 ++ F Sbjct: 619 VLEAFA 624 >gi|161511522|ref|NP_872860.2| arginyl-tRNA synthetase [Haemophilus ducreyi 35000HP] Length = 575 Score = 39.2 bits (90), Expect = 2.6, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 5/94 (5%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I A E ++ E+ L E E+ L + F + H + Sbjct: 463 AYTRIRSIFARAEIDPDTLTGEMQ---LTEEKERTLALKLLQFEEALTAVAKEGMPHILC 519 Query: 652 DLLHSICEPIEIFFDQV-LVNVDDREVRDNRLSL 684 L+ + F++ ++N D ++ +RL L Sbjct: 520 QYLYELAGIFSSFYEACPMLNA-DEAIKHSRLRL 552 >gi|330685904|gb|EGG97533.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU121] Length = 553 Score = 39.2 bits (90), Expect = 2.6, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 45/100 (45%) Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 RI IL +++ +IS ++ + E L +++F I+ + D + H++ + + Sbjct: 441 RICSILKQAKEQGIDISTDVDFSKITNEKAIELLKKVAEFEPTIESAADSRAPHRMTNYI 500 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + F++ V DD E ++L++ ++ + Sbjct: 501 QDLASHFHKFYNAEKVLTDDIEKTKAHIALVEAVRITLNN 540 >gi|317130799|ref|YP_004097081.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] gi|315475747|gb|ADU32350.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] Length = 555 Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 43/100 (43%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI +L E+ + L E E L + ++ + ++ + H++ Sbjct: 440 AHARICSMLRQARDLGYEVDPHAQFERLTAEKELDLMKKLGEYPEAVADAAKKRAPHRMA 499 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++ + + + F++ V +D E+ RL L++ ++ Sbjct: 500 NYVYDLAQTLHSFYNAEKVINEDSELTKARLGLMEAVRAT 539 >gi|241661767|ref|YP_002980127.1| arginyl-tRNA synthetase [Ralstonia pickettii 12D] gi|240863794|gb|ACS61455.1| arginyl-tRNA synthetase [Ralstonia pickettii 12D] Length = 596 Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 40/106 (37%), Gaps = 10/106 (9%) Query: 597 FQILAIEEKKNREISLEISPQYL------LLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 +I ++ E+ + + + + L ++ F + ++ H + Sbjct: 480 ARICSVFERAGVDPASLTNADLAAVTGPDVSPQATALVQRLAAFPDMLADAARELAPHAV 539 Query: 651 GDLLHSICEPIEIFF--DQVLVNVDDREVRDNRLSLLQYIKNIILI 694 L + F+ D+VLV DD V+ RL+LL + ++ Sbjct: 540 AFYLRDLAGDFHAFYNADRVLV--DDEAVKRARLALLAATRQVLRN 583 >gi|331647473|ref|ZP_08348565.1| arginine--tRNA ligase [Escherichia coli M605] gi|330911686|gb|EGH40196.1| arginyl-tRNA synthetase [Escherichia coli AA86] gi|331043197|gb|EGI15335.1| arginine--tRNA ligase [Escherichia coli M605] Length = 577 Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 38/94 (40%), Gaps = 3/94 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ + E +++ P + + E +L A + F + H + Sbjct: 463 AYTRVLSVFRKAEINEEQLAAA--PVIIREDREAQLAARLLQFEETLTVVAREGTPHVMC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N ++ EVR++RL L Sbjct: 521 AYLYDLAGLFSGFYEHCPILNAENEEVRNSRLKL 554 >gi|145641732|ref|ZP_01797308.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021] gi|145273546|gb|EDK13416.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.4-21] Length = 158 Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I + + + P + + E+ L + F +Q H + Sbjct: 44 AYTRIRSIFNKTDINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQTVGKEGTPHVLC 101 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N +D ++ +RL L Sbjct: 102 AYLYELAGIFSSFYEHCPILNAEDESIKLSRLKL 135 >gi|329898088|ref|ZP_08272297.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC3088] gi|328920960|gb|EGG28385.1| Methionyl-tRNA synthetase [gamma proteobacterium IMCC3088] Length = 683 Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats. Identities = 11/87 (12%), Positives = 30/87 (34%), Gaps = 4/87 (4%) Query: 596 IFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 + +I+ I + + + L + + D I + + Y++ + Sbjct: 386 VGKIVNIASRCAGFLKKRFDNTLAAEQEAPELLSDLLDARRSIAAHFEGRDYNRAIREVI 445 Query: 656 SICEPIEIFFDQVL--VNVDDREVRDN 680 ++ + + F D+ V D +N Sbjct: 446 ALADKVNQFIDEKQPWVLAKDEA--NN 470 >gi|145635709|ref|ZP_01791404.1| arginyl-tRNA synthetase [Haemophilus influenzae PittAA] gi|145267032|gb|EDK07041.1| arginyl-tRNA synthetase [Haemophilus influenzae PittAA] Length = 577 Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 78/225 (34%), Gaps = 17/225 (7%) Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 ++ S + + W I K D ++L G++ ++ + Sbjct: 333 ALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTVKLAD 392 Query: 534 LILFFHDRLKLYLHDRDIR--HDLIEAIL------RPENDNLLTIVDLIKHLNEFFSSAK 585 L+ +R + +++++ +D EA++ + +L ++ ++ + Sbjct: 393 LLDEAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSK-NRTTDYVFDWDNMLS 451 Query: 586 GEKFLL-----SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 E + RI I + + + P + + E+ L + F +Q Sbjct: 452 FESNTAPYMQYAYTRIRSIFNKTDINSTALLAV--PLTIKDDKERTLAIKLLQFEEAVQT 509 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 H + L+ + F++ + N +D ++ +RL L Sbjct: 510 VGKEGTPHVLCAYLYELAGIFSSFYEHCPILNAEDESIKLSRLKL 554 >gi|227485245|ref|ZP_03915561.1| arginine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227236705|gb|EEI86720.1| arginine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 565 Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 36/93 (38%), Gaps = 3/93 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R +L + + + + E L ++ F + ++ + + Sbjct: 453 TYARAKSVLRKAGLGEIKPLA---IEKITSDEEFSLVKKLAGFEDVVVKAKEKYEPSLVT 509 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L I + F++ + V+D ++++ RL+L Sbjct: 510 RHLTDIAKSFNKFYNSSKIMVEDEKLKEERLAL 542 >gi|88195168|ref|YP_499969.1| hypothetical protein SAOUHSC_01447 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|122539561|sp|Q2FYJ6|EBH_STAA8 RecName: Full=Extracellular matrix-binding protein ebh; AltName: Full=ECM-binding protein homolog; Flags: Precursor gi|87202726|gb|ABD30536.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] Length = 9535 Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 16/96 (16%) Query: 569 TIVDLIKHL-NEFFSSAKGEKF-LLSAK-RIFQILAIEEKKNREISLEISPQYLLLEAEK 625 I ++ L +E + + K RI QIL +I+ E E+ Sbjct: 8803 DIDKRVQALIDEIDQNPNLTDKEKQALKDRINQILQQG-------HNDINNALTKEEIEQ 8855 Query: 626 R---LYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 L + D ++ + L + Sbjct: 8856 AKAQLAQALQDIKDLVK---AKEDAKNAIKALANAK 8888 >gi|114331591|ref|YP_747813.1| arginyl-tRNA synthetase [Nitrosomonas eutropha C91] gi|122313625|sp|Q0AFN4|SYR_NITEC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|114308605|gb|ABI59848.1| arginyl-tRNA synthetase [Nitrosomonas eutropha C91] Length = 586 Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 1/103 (0%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI +L +I + L AE L I DF I+ + H I Sbjct: 472 AHARICSVLEQWGGA-VDIFGRAETELLTNPAELVLLQKIIDFPDTIEAAAKEHAPHLIA 530 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 L + +++ + D ++ RL+L+ + ++ Sbjct: 531 FFLRELASEFHSYYNSTRFLIPDEALKIARLALISAVCQVLSK 573 >gi|37498986|gb|AAQ91583.1| glycyl-tRNA synthetase [Helicobacter mustelae] Length = 51 Score = 38.9 bits (89), Expect = 3.2, Method: Composition-based stats. Identities = 7/49 (14%), Positives = 20/49 (40%), Gaps = 3/49 (6%) Query: 23 EDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 ++ + L+ + + ++TP R+ L+ + + EE+ Sbjct: 6 KNFATKWQEALQRHSIPPIQTQIFYTPRRIVLFCEQFPIRT---QEEKK 51 >gi|94311701|ref|YP_584911.1| methionyl-tRNA synthetase [Cupriavidus metallidurans CH34] gi|122987861|sp|Q1LJN4|SYM_RALME RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|93355553|gb|ABF09642.1| methionyl-tRNA synthetase [Cupriavidus metallidurans CH34] Length = 690 Score = 38.9 bits (89), Expect = 3.2, Method: Composition-based stats. Identities = 6/68 (8%), Positives = 20/68 (29%), Gaps = 5/68 (7%) Query: 598 QIL-AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 I + +++ L L + + + + + Y + L+ Sbjct: 395 NIASRAAGFLVKRFDGKVNEAALANP----LLEQLRQAAPQLAQYYEGREYSKALRLVME 450 Query: 657 ICEPIEIF 664 + + + F Sbjct: 451 LTDAVNAF 458 >gi|320142680|gb|EFW34483.1| signal peptide, YSIRK family [Staphylococcus aureus subsp. aureus MRSA177] Length = 10498 Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 16/96 (16%) Query: 569 TIVDLIKHL-NEFFSSAKGEKF-LLSAK-RIFQILAIEEKKNREISLEISPQYLLLEAEK 625 I ++ L +E + + K RI QIL +I+ E E+ Sbjct: 9766 DIDKRVQALIDEIDQNPNLTDKEKQALKDRINQILQQG-------HNDINNALTKEEIEQ 9818 Query: 626 R---LYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 L + D ++ + L + Sbjct: 9819 AKAQLAQALQDIKDLVK---AKEDAKNAIKALANAK 9851 >gi|182414382|ref|YP_001819448.1| arginyl-tRNA synthetase [Opitutus terrae PB90-1] gi|177841596|gb|ACB75848.1| arginyl-tRNA synthetase [Opitutus terrae PB90-1] Length = 590 Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 4/101 (3%) Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L + RI I E + E + E L + F ++ + + R H Sbjct: 472 LLYAVARIHSIFRKAGATPGEPATESAATEPETPTEIALARKLLKFPDAVRLATETLRPH 531 Query: 649 QIGDLLHSICEPIEIF--FDQVLVNVDDREVRDNRLSLLQY 687 + L + F D+VLV DD +R RL L Sbjct: 532 FLSLYLFELAGDYSTFNNADRVLV--DDPVIRARRLLLCSR 570 >gi|57651379|ref|YP_186319.1| cell wall associated fibronectin-binding protein [Staphylococcus aureus subsp. aureus COL] gi|81694497|sp|Q5HFY8|EBH_STAAC RecName: Full=Extracellular matrix-binding protein ebh; AltName: Full=ECM-binding protein homolog; Flags: Precursor gi|57285565|gb|AAW37659.1| Cell wall associated fibronectin-binding protein [Staphylococcus aureus subsp. aureus COL] Length = 10498 Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 16/96 (16%) Query: 569 TIVDLIKHL-NEFFSSAKGEKF-LLSAK-RIFQILAIEEKKNREISLEISPQYLLLEAEK 625 I ++ L +E + + K RI QIL +I+ E E+ Sbjct: 9766 DIDKRVQALIDEIDQNPNLTDKEKQALKDRINQILQQG-------HNDINNALTKEEIEQ 9818 Query: 626 R---LYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 L + D ++ + L + Sbjct: 9819 AKAQLAQALQDIKDLVK---AKEDAKNAIKALANAK 9851 >gi|291528955|emb|CBK94541.1| DNA internalization-related competence protein ComEC/Rec2 [Eubacterium rectale M104/1] Length = 787 Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 51/181 (28%), Gaps = 12/181 (6%) Query: 85 FLRSTGLQ-TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW 143 F RS G+ +++ IK K Y L K + + L + V SM Sbjct: 169 FYRSQGIDFSVNADSIKTSTGKHAWYYHRLEKLRDTLSASLLEVTDETTAGVLS--SMLL 226 Query: 144 STTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQ 203 + + I IL + + + + + R Sbjct: 227 GDKSYLDDEIKDLYQVSGISHILAI-----SGLHISIVGMAFYKLLRKRRVSYTAAFVCS 281 Query: 204 SLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLV-EWVQV 262 + + + RR + LA+A+G L +I L+ + V Sbjct: 282 AALILSYAVMTGNAVST---RRAVGMFILTMLAAALGRCTDMLNSLGIMVIYLLWDNPMV 338 Query: 263 F 263 Sbjct: 339 L 339 >gi|254516119|ref|ZP_05128179.1| arginyl-tRNA synthetase [gamma proteobacterium NOR5-3] gi|219675841|gb|EED32207.1| arginyl-tRNA synthetase [gamma proteobacterium NOR5-3] Length = 560 Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 51/147 (34%), Gaps = 8/147 (5%) Query: 542 LKLYLHDRDIRHDLIEAILRPENDNL-LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 L+ + + + R N L I L++ + + R+ + Sbjct: 395 LRDLITEVGRDATRYFLVARSPNSQLTFDIDL---ALSQSNDNPVFY-IQYAHARVCSVR 450 Query: 601 AIEEKKNREISLEISP---QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 ++ + L++ L+ E + ++ F + + QI + L + Sbjct: 451 RKFLEQGLPVDLDLDTVALDRLVEPQEIEVLKQLARFPEIVARAGTSAEPQQIANYLREL 510 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSL 684 +++ V +DD E+R RL+L Sbjct: 511 AGEFHAYYNAHKVLIDDEELRSARLAL 537 >gi|254819374|ref|ZP_05224375.1| hypothetical protein MintA_05590 [Mycobacterium intracellulare ATCC 13950] Length = 658 Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 97/285 (34%), Gaps = 30/285 (10%) Query: 337 WKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVL 396 +++ ++ + N +S ++ + ++L+ L RL L F A VS Sbjct: 314 FEKLRDLVINAASRLDALTQQYVELTTRLAPAEQRLAALHHDFSA---AALTSVSGNVTT 370 Query: 397 GKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 K+ D ++ + +V + +G+ A+L + + D Sbjct: 371 AKERLAFADRNIGTARELAAHAVTGGQAGLVDAVRAAESALGQARALLDAVDNAASDIQ- 429 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTL-INFWAINEKPSGSKDPYALRRATLGIIRI 515 ++ +P+ ++AD D + + +KP+ S D A R A + Sbjct: 430 ------HAIDGLPS-------AVADTKDDIARANELLQKKPTRSGDLVAARDAATRAVES 476 Query: 516 ILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + PL+ F + + L ++ E + R L T ++ Sbjct: 477 ARAGGSEDPLAAFGQVTKADAALNGLLATLTEEQ----ATAERLNRSLEQALFTAQSRVR 532 Query: 576 HLNEFFSS------AKGEKFLLSAKRIFQILAIEEKKNREISLEI 614 ++++ + L AKR + A ++K + I Sbjct: 533 AVSDYIDTRRGSVGPDARTRLAEAKR--HLQAAQDKGATNPNEAI 575 >gi|299142422|ref|ZP_07035554.1| arginine--tRNA ligase [Prevotella oris C735] gi|298576144|gb|EFI48018.1| arginine--tRNA ligase [Prevotella oris C735] Length = 605 Score = 38.9 bits (89), Expect = 3.4, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 1/104 (0%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL + +N I +S L E E +L +++FG ++++ I Sbjct: 489 TYARIRSILRKAKAENIAIPTTLSTDAPLNEKEIQLIQKLNEFGAAVEQAGKDYSPSGIA 548 Query: 652 DLLHSICEPIEIFF-DQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + + + F+ D ++N D + RL L + + +I Sbjct: 549 NYCYELTKDFNQFYHDYSILNADTEIEKITRLMLAKNVAKVIKN 592 >gi|302338315|ref|YP_003803521.1| arginyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] gi|301635500|gb|ADK80927.1| arginyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] Length = 593 Score = 38.9 bits (89), Expect = 3.4, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 6/108 (5%) Query: 595 RIFQILAIEEKKNREISL-EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 RI +L E+++ E + P + E+ L +IS F + ++ + Sbjct: 479 RISSMLRKFEERSDEFKGATVDPSLITTIEERELIKLISLFPEKVAQAGAEFNPSIVTTY 538 Query: 654 LHSICEPIEIFF-DQVLVNVDDREVRDNRLSL----LQYIKNIILIVI 696 L+ + ++ D ++N DD+ + RLSL LQ +KN +V Sbjct: 539 LYDLSRTFSRYYHDNQILNNDDKNLAFTRLSLAKGVLQVLKNAYWLVG 586 >gi|288803789|ref|ZP_06409217.1| tRNA ligase [Prevotella melaninogenica D18] gi|288333776|gb|EFC72223.1| tRNA ligase [Prevotella melaninogenica D18] Length = 606 Score = 38.9 bits (89), Expect = 3.5, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL E +N + ++ L E E L ++DFG + ++ I Sbjct: 490 TYARIRSILRKAEAQNITLPATLNDDAPLNEKEIALIQKLNDFGAAVAQAGIDYSPSGIA 549 Query: 652 DLLHSICEPIEIFF-DQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + + + F+ D ++N D + RL + + + +I Sbjct: 550 NYCYELTKEFNQFYHDYSILNADTEAEKIARLMIAKNVAKVIKN 593 >gi|15966596|ref|NP_386949.1| glycogen phosphorylase protein [Sinorhizobium meliloti 1021] gi|15075868|emb|CAC47422.1| Probable glycogen phosphorylase [Sinorhizobium meliloti 1021] Length = 821 Score = 38.9 bits (89), Expect = 3.5, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 63/219 (28%), Gaps = 51/219 (23%) Query: 521 IDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEA-------ILRPENDNLLTIVDL 573 + L + +L + DR+ + R L++ I D + + Sbjct: 451 LHTELMKETVFADLHALYPDRINNKTNGITPRRWLMQCNPGLFGLIREAIGDEFMDNTEA 510 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQ---------------- 617 ++ L+ F A ++ + KR + + + + + I P Sbjct: 511 LQALDAFADKADFQEHFAAVKRA-NKVRLAKLVQANLGIRIDPSAMFDIQIKRIHEYKRQ 569 Query: 618 YLLLEAEKRLYAVISDF-------GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 L L LY I + YH L+ + I V Sbjct: 570 LLNLIEAVALYDQIRSHPELDWVPRVKLFAGKAAPSYHNA-KLIIKLANDIAR------V 622 Query: 671 NVDDREVRDNRLSLLQ---------YIKNIILIVINVQK 700 +D VR LL+ + +++ ++ + Sbjct: 623 INNDPAVR----GLLKVVFVPNYNVSLAEVMVPAADLSE 657 >gi|307300369|ref|ZP_07580149.1| glycogen/starch/alpha-glucan phosphorylase [Sinorhizobium meliloti BL225C] gi|307319652|ref|ZP_07599078.1| glycogen/starch/alpha-glucan phosphorylase [Sinorhizobium meliloti AK83] gi|306894774|gb|EFN25534.1| glycogen/starch/alpha-glucan phosphorylase [Sinorhizobium meliloti AK83] gi|306904535|gb|EFN35119.1| glycogen/starch/alpha-glucan phosphorylase [Sinorhizobium meliloti BL225C] Length = 821 Score = 38.5 bits (88), Expect = 3.6, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 63/219 (28%), Gaps = 51/219 (23%) Query: 521 IDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEA-------ILRPENDNLLTIVDL 573 + L + +L + DR+ + R L++ I D + + Sbjct: 451 LHTELMKETVFADLHALYPDRINNKTNGITPRRWLMQCNPGLFGLIREAIGDEFMDNTEA 510 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQ---------------- 617 ++ L+ F A ++ + KR + + + + + I P Sbjct: 511 LQALDAFADKADFQEHFAAVKRA-NKVRLAKLVQANLGIRIDPSAMFDIQIKRIHEYKRQ 569 Query: 618 YLLLEAEKRLYAVISDF-------GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 L L LY I + YH L+ + I V Sbjct: 570 LLNLIEAVALYDQIRSHPELDWVPRVKLFAGKAAPSYHNA-KLIIKLANDIAR------V 622 Query: 671 NVDDREVRDNRLSLLQ---------YIKNIILIVINVQK 700 +D VR LL+ + +++ ++ + Sbjct: 623 INNDPAVR----GLLKVVFVPNYNVSLAEVMVPAADLSE 657 >gi|126652598|ref|ZP_01724762.1| arginyl-tRNA synthetase [Bacillus sp. B14905] gi|126590589|gb|EAZ84706.1| arginyl-tRNA synthetase [Bacillus sp. B14905] Length = 555 Score = 38.5 bits (88), Expect = 3.6, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 2/104 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL ++ + E + L E E L I DF + ++ H+ H+I Sbjct: 440 AHARISSILRSANEQGFAATSE-NLNLLTAEKEIDLLKKIGDFPQVVADAAKHRTPHRIA 498 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQYIKNIILI 694 + + F++ V ++E+ + RL+L+ ++ I Sbjct: 499 NYIQETAAAFHSFYNAEKVLDASNKELTEARLALITAVRTTIAN 542 >gi|119493762|ref|ZP_01624332.1| hypothetical protein L8106_27254 [Lyngbya sp. PCC 8106] gi|119452507|gb|EAW33693.1| hypothetical protein L8106_27254 [Lyngbya sp. PCC 8106] Length = 1042 Score = 38.5 bits (88), Expect = 3.7, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 51/145 (35%), Gaps = 23/145 (15%) Query: 524 PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL---------- 573 L++ + D L + + L+ + +D+R + + +++L Sbjct: 465 NLTEALTDMELAINIIEELRTKIISQDLRTSYFATVYGYYEFYIDLLMELHQQNPNQGYD 524 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 K LN S +G R +L I + +I + PQ L EK L ++ Sbjct: 525 AKALNA---SERG--------RARSLLDILAESGADIKKGVDPQLL--AEEKSLLQQLNA 571 Query: 634 FGTHIQESMDHKRYHQIGDLLHSIC 658 + + + ++ + +I Sbjct: 572 LDQTRKLNPGERNIDELKQEIEAIR 596 >gi|254482629|ref|ZP_05095867.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] gi|214036988|gb|EEB77657.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] Length = 561 Score = 38.5 bits (88), Expect = 3.9, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 19/118 (16%) Query: 592 SAKRIFQILAIEEKKNREISLEI---SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + R+ I+ E++ S+E S L + EK L + F + + ++ H Sbjct: 443 AHARVCSIMRKLEEQGDTWSIEAGLESLGQLTEDHEKALMRRLDQFPEVVSHAAENSEPH 502 Query: 649 QIGDLLHSICEPIEIFFD--------QVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + L + D + LV DD+ VRD RL+L + ++ +I +++ Sbjct: 503 NVANYLRELAG------DFHSWYNAHKTLV--DDKSVRDARLALSEAVRQVINNGLDL 552 >gi|320538434|ref|ZP_08038301.1| arginyl-tRNA synthetase [Treponema phagedenis F0421] gi|320144696|gb|EFW36445.1| arginyl-tRNA synthetase [Treponema phagedenis F0421] Length = 594 Score = 38.5 bits (88), Expect = 4.0, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 3/73 (4%) Query: 595 RIFQILAIEEKKNREIS---LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 RI IL E + + S + P L E+E L I DF + + D + Sbjct: 478 RITSILKKAETEEGKQSISGGSVKPALLTHESEWTLLKTIEDFPQQVSRAADQYDSSIVT 537 Query: 652 DLLHSICEPIEIF 664 L+ + + F Sbjct: 538 AYLYELSKNFSRF 550 >gi|171464254|ref|YP_001798367.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238692828|sp|B1XSF4|SYR_POLNS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|171193792|gb|ACB44753.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 575 Score = 38.5 bits (88), Expect = 4.1, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 45/105 (42%), Gaps = 5/105 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL + +++ L +A L ++++ + + + H + Sbjct: 461 AHARISSILQQWGGQTSDLASA-DLSLLQSKASDHLLRCLAEYPEMLTTAAEELAPHALA 519 Query: 652 DLLHSICEPIEIFF--DQVLVNVDDREVRDNRLSLLQYIKNIILI 694 L ++ F+ D+VLV DD+ ++ RL+LL + ++ Sbjct: 520 FYLRNLAGDFHTFYNADRVLV--DDQNLKLARLALLSATRQVLQN 562 >gi|160944624|ref|ZP_02091851.1| hypothetical protein FAEPRAM212_02137 [Faecalibacterium prausnitzii M21/2] gi|158443808|gb|EDP20812.1| hypothetical protein FAEPRAM212_02137 [Faecalibacterium prausnitzii M21/2] Length = 616 Score = 38.5 bits (88), Expect = 4.1, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 2/106 (1%) Query: 592 SAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + RI IL E + + + I L +E L +++ F I + + + Sbjct: 499 AHARICSILKKMESEGVQFAGAEHIDATLLTEPSEMDLIRMLAAFPQEIVMAAEKYDPSR 558 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 I + + F+ + D V+ RL+L +KN I V Sbjct: 559 INRFVIDLASAFHRFYGNCRIQGADPAVQQARLALCIGVKNAIFNV 604 >gi|118777731|ref|XP_308240.3| laminin gamma 1 (AGAP007629-PA) [Anopheles gambiae str. PEST] gi|158285318|ref|XP_001687877.1| laminin gamma 1 (AGAP007629-PB) [Anopheles gambiae str. PEST] gi|116132043|gb|EAA04042.3| laminin gamma 1 (AGAP007629-PA) [Anopheles gambiae str. PEST] gi|157019934|gb|EDO64526.1| laminin gamma 1 (AGAP007629-PB) [Anopheles gambiae str. PEST] Length = 1624 Score = 38.5 bits (88), Expect = 4.2, Method: Composition-based stats. Identities = 53/374 (14%), Positives = 115/374 (30%), Gaps = 45/374 (12%) Query: 314 GGAAIVQGNSRVVAARLEDALHFWKR-DQNNLPNLSSLKESALKFNL------DLSKPLD 366 GG + R + ARL++ DQ+ + + L D + LD Sbjct: 1098 GGEKTLNEILRELEARLQEVQKLLDNADQSQEVTNHKISKGGYNATLANGKIQDARRQLD 1157 Query: 367 QRMARLDMLDVVFHAK-------IGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L A+ +G Q ++S I ++ A A+ + + Sbjct: 1158 NAIELLQTEGNTALARAKDISGHLGNQTNQISGISREARQYADRFKAEADANMKQAQEAH 1217 Query: 420 -------------ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + I +E I E A + + + E+ L + Sbjct: 1218 KKASEALKKANDAFNQQANITKELDT---SISSEIAQAREKLNTVSKLTEQALTRAREVN 1274 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYA--LRRATLGIIRIILENKIDIP 524 + + A + + + D A L +++ +I Sbjct: 1275 DEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLANKMRDHAQLLENVGTNIE 1334 Query: 525 LSQ-FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L++ ++ +L D + + + +A+ + L + L F + Sbjct: 1335 LAETLLDRASLQK--EDAVDALKQLKYAKEQAEKAV-AEGDGTLQKANYTYQTLAGFKNQ 1391 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + S++R + L + R+I ++ + LL AE+ LYA + + + Sbjct: 1392 VE-----ESSRRAEEALNLVPNIERQI---VNSRDLLQRAEEALYAASRNAEDARKNAQT 1443 Query: 644 HKR-YHQIGDLLHS 656 + Y + L Sbjct: 1444 AQDKYAEEASKLAE 1457 >gi|268590249|ref|ZP_06124470.1| methionine--tRNA ligase [Providencia rettgeri DSM 1131] gi|291314533|gb|EFE54986.1| methionine--tRNA ligase [Providencia rettgeri DSM 1131] Length = 675 Score = 38.5 bits (88), Expect = 4.3, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 13/131 (9%) Query: 537 FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 F R L D D A L D++ L +F + + Sbjct: 340 FITARSYLDHLDADCLRYYYAAKLSSRIDDI-DFN-----LEDFVQRVNSDI-------V 386 Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 +++ + + I+ + AE LY D I E +++ Y++ + + Sbjct: 387 NKVVNLASRNAGFIAKRFDGKLSANLAEPELYQQFVDAAKVIGEDYNNREYNKAIREIMA 446 Query: 657 ICEPIEIFFDQ 667 + + + D+ Sbjct: 447 LADIANRYVDE 457 >gi|68249833|ref|YP_248945.1| arginyl-tRNA synthetase [Haemophilus influenzae 86-028NP] gi|81335742|sp|Q4QL12|SYR_HAEI8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|68058032|gb|AAX88285.1| arginyl-tRNA synthetase [Haemophilus influenzae 86-028NP] Length = 577 Score = 38.5 bits (88), Expect = 4.4, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I + + + P + + E+ L + F +Q H + Sbjct: 463 AYTRIRSIFNKTDINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQTVGKEGTPHVLC 520 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 L+ + F++ + N ++ ++ +RL L Sbjct: 521 AYLYELAGIFSSFYEHCPILNAENESIKLSRLKL 554 >gi|146226|gb|AAA23917.1| glycyl-tRNA synthetase beta subunit (glyS) [Escherichia coli] Length = 20 Score = 38.5 bits (88), Expect = 4.5, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 13/20 (65%), Gaps = 2/20 (10%) Query: 1 MPD--FLLEIYSEEIPARMQ 18 M + FL+EI +EE+P + Sbjct: 1 MSEKTFLVEIGTEELPPKAL 20 >gi|145632971|ref|ZP_01788704.1| arginyl-tRNA synthetase [Haemophilus influenzae 3655] gi|144986627|gb|EDJ93193.1| arginyl-tRNA synthetase [Haemophilus influenzae 3655] gi|309973254|gb|ADO96455.1| Arginyl-tRNA synthetase [Haemophilus influenzae R2846] Length = 577 Score = 38.5 bits (88), Expect = 4.5, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 78/225 (34%), Gaps = 17/225 (7%) Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 ++ S + + W I K D ++L G++ I+ + Sbjct: 333 ALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTIKLAD 392 Query: 534 LILFFHDRLKLYLHDRDIR--HDLIEAIL------RPENDNLLTIVDLIKHLNEFFSSAK 585 L+ +R + +++++ +D EA++ + +L ++ ++ + Sbjct: 393 LLDEAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSK-NRTTDYVFDWDNMLS 451 Query: 586 GEKFLL-----SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 E + RI I + + + P + + E+ L + F +Q Sbjct: 452 FEGNTAPYMQYAYTRIRSIFNKTDINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQT 509 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 H + L+ + F++ + N ++ ++ +RL L Sbjct: 510 VGKEGTPHVLCAYLYELAGIFSSFYEHCPILNAENESIKLSRLKL 554 >gi|260881528|ref|ZP_05404644.2| arginine--tRNA ligase [Mitsuokella multacida DSM 20544] gi|260848689|gb|EEX68696.1| arginine--tRNA ligase [Mitsuokella multacida DSM 20544] Length = 546 Score = 38.5 bits (88), Expect = 4.5, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I E+ + + L E+E L I ++ + ++ +I Sbjct: 431 AHARICSIFRQAEETKLALGEAPHLELLTDESEVALIKKIEEYPEEVAKAAADYAPQRIA 490 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + + F+++ + D ++ + RL+L Sbjct: 491 RYSYDLAALFHSFYNKCRIMGVDHDLAEARLAL 523 >gi|82699318|ref|YP_413892.1| hypothetical protein BAB1_0432 [Brucella melitensis biovar Abortus 2308] gi|189023642|ref|YP_001934410.1| glycyl-tRNA synthetase, beta subunit [Brucella abortus S19] gi|254688704|ref|ZP_05151958.1| hypothetical protein Babob68_00669 [Brucella abortus bv. 6 str. 870] gi|254693187|ref|ZP_05155015.1| hypothetical protein Babob3T_00667 [Brucella abortus bv. 3 str. Tulya] gi|254696831|ref|ZP_05158659.1| hypothetical protein Babob28_03723 [Brucella abortus bv. 2 str. 86/8/59] gi|254701211|ref|ZP_05163039.1| hypothetical protein Bsuib55_10177 [Brucella suis bv. 5 str. 513] gi|254703757|ref|ZP_05165585.1| hypothetical protein Bsuib36_07507 [Brucella suis bv. 3 str. 686] gi|254709552|ref|ZP_05171363.1| hypothetical protein BpinB_04617 [Brucella pinnipedialis B2/94] gi|254713030|ref|ZP_05174841.1| hypothetical protein BcetM6_06619 [Brucella ceti M644/93/1] gi|254716616|ref|ZP_05178427.1| hypothetical protein BcetM_09378 [Brucella ceti M13/05/1] gi|254729737|ref|ZP_05188315.1| hypothetical protein Babob42_00677 [Brucella abortus bv. 4 str. 292] gi|256031046|ref|ZP_05444660.1| hypothetical protein BpinM2_10389 [Brucella pinnipedialis M292/94/1] gi|256060540|ref|ZP_05450708.1| hypothetical protein Bneo5_09333 [Brucella neotomae 5K33] gi|256159110|ref|ZP_05456931.1| hypothetical protein BcetM4_09371 [Brucella ceti M490/95/1] gi|256254449|ref|ZP_05459985.1| hypothetical protein BcetB_09198 [Brucella ceti B1/94] gi|256256951|ref|ZP_05462487.1| hypothetical protein Babob9C_06251 [Brucella abortus bv. 9 str. C68] gi|306839899|ref|ZP_07472697.1| Hypothetical protein BROD_2772 [Brucella sp. NF 2653] gi|306845033|ref|ZP_07477614.1| Hypothetical protein BIBO1_1718 [Brucella sp. BO1] gi|82615419|emb|CAJ10388.1| hypothetical [Brucella melitensis biovar Abortus 2308] gi|189019214|gb|ACD71936.1| Glycyl-tRNA synthetase, beta subunit [Brucella abortus S19] gi|306274665|gb|EFM56454.1| Hypothetical protein BIBO1_1718 [Brucella sp. BO1] gi|306405085|gb|EFM61366.1| Hypothetical protein BROD_2772 [Brucella sp. NF 2653] Length = 37 Score = 38.5 bits (88), Expect = 4.5, Method: Composition-based stats. Identities = 12/15 (80%), Positives = 14/15 (93%) Query: 1 MPDFLLEIYSEEIPA 15 MPD LLE++SEEIPA Sbjct: 1 MPDLLLELFSEEIPA 15 >gi|229845606|ref|ZP_04465732.1| arginyl-tRNA synthetase [Haemophilus influenzae 6P18H1] gi|229811473|gb|EEP47176.1| arginyl-tRNA synthetase [Haemophilus influenzae 6P18H1] Length = 577 Score = 38.5 bits (88), Expect = 4.6, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 78/225 (34%), Gaps = 17/225 (7%) Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 ++ S + + W I K D ++L G++ I+ + Sbjct: 333 ALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHKNFGMMLGKDGKPFKTRTGGTIKLAD 392 Query: 534 LILFFHDRLKLYLHDRDIR--HDLIEAIL------RPENDNLLTIVDLIKHLNEFFSSAK 585 L+ +R + +++++ +D EA++ + +L ++ ++ + Sbjct: 393 LLDEAIERATVLINEKNTNLSNDEKEAVIEAVGIGAVKYADLSK-NRTTDYVFDWDNMLS 451 Query: 586 GEKFLL-----SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 E + RI I + + + P + + E+ L + F +Q Sbjct: 452 FEGNTAPYMQYAYTRIRSIFNKTDINSTALLAA--PLTIKDDKERTLAIKLLQFEEAVQT 509 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 H + L+ + F++ + N ++ ++ +RL L Sbjct: 510 VGKEGTPHVLCAYLYELAGIFSSFYEHCPILNAENESIKLSRLKL 554 >gi|319944918|ref|ZP_08019180.1| arginine--tRNA ligase [Lautropia mirabilis ATCC 51599] gi|319741488|gb|EFV93913.1| arginine--tRNA ligase [Lautropia mirabilis ATCC 51599] Length = 575 Score = 38.5 bits (88), Expect = 4.6, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 4/107 (3%) Query: 592 SAKRIFQILAIEEKKNREISLE----ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + RI ILA ++ + + L E L A ++ F + E+ Sbjct: 456 AHARICSILAQAAERGGQSAGAEGRGAHIDRLTAPTEYALMARMAAFPAMLTEAARELAP 515 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 HQ+ L + F++ V VDD E++ R++LL+ ++ ++ Sbjct: 516 HQLAYYLKDLAADFHAFYNAERVLVDDAELQSARMALLEAVRTVLRR 562 >gi|260582207|ref|ZP_05850001.1| arginyl-tRNA synthetase [Haemophilus influenzae NT127] gi|260094839|gb|EEW78733.1| arginyl-tRNA synthetase [Haemophilus influenzae NT127] Length = 577 Score = 38.1 bits (87), Expect = 4.7, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 7/96 (7%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYL--LLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + RI I + + + L + E+ L + F +Q H Sbjct: 463 AYTRIRSIFNKTDINSTALL----AALLTIKDDKERTLAIKLLQFEEAVQTVGKEGTPHV 518 Query: 650 IGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 + L+ + F++ + N +D ++ +RL L Sbjct: 519 LCAYLYELAGIFSSFYEHCPILNAEDESIKLSRLKL 554 >gi|302392974|ref|YP_003828794.1| arginyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] gi|302205051|gb|ADL13729.1| arginyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] Length = 561 Score = 38.1 bits (87), Expect = 4.7, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 2/109 (1%) Query: 592 SAKRIFQILAIEEKKNREISL--EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + RI IL +K+ +I + + L E E L + D+ + ES + H Sbjct: 444 AHARICSILDQIKKEEIKIEDVSGVDLERLDTEVELDLIQKLGDYPEELAESAKSREPHH 503 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + + F+++ V + D EV RL L+ +K ++ ++N+ Sbjct: 504 MARYAYELAAQFHSFYNKCHVLIQDEEVMQARLQLVLAVKQVLSNLLNI 552 >gi|6706335|emb|CAB66001.1| laminin gamma 1 precursor [Anopheles gambiae] Length = 1623 Score = 38.1 bits (87), Expect = 4.9, Method: Composition-based stats. Identities = 52/373 (13%), Positives = 114/373 (30%), Gaps = 45/373 (12%) Query: 315 GAAIVQGNSRVVAARLEDALHFWKR-DQNNLPNLSSLKESALKFNL------DLSKPLDQ 367 G + R + ARL++ DQ+ + + L D + LD Sbjct: 1098 GEKTLNEILRELEARLQEVQKLLDNADQSQEVTNHKISKGGYNATLANGKIQDARRQLDN 1157 Query: 368 RMARLDMLDVVFHAK-------IGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK- 419 + L A+ +G Q ++S I ++ A A+ + + Sbjct: 1158 AIELLQTEGNTALARAKDISGHLGNQTNQISGISREARQYADRFKAEADANMKQAQEAHK 1217 Query: 420 ------------ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + I +E I E A + + + E+ L + + Sbjct: 1218 KASEALKKANDAFNQQANITKELDT---SISSEIAQAREKLNTVSKLTEQALTRAREVND 1274 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYA--LRRATLGIIRIILENKIDIPL 525 + A + + + D A L +++ +I L Sbjct: 1275 EALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLANKMRDHAQLLENVGTNIEL 1334 Query: 526 SQ-FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 ++ ++ +L D + + + +A+ + L + L F + Sbjct: 1335 AETLLDRASLQK--EDAVDALKQLKYAKEQAEKAV-AEGDGTLQKANYTYQTLAGFKNQV 1391 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + S++R + L + R+I ++ + LL AE+ LYA + + + Sbjct: 1392 E-----ESSRRAEEALNLVPNIERQI---VNSRDLLQRAEEALYAASRNAEDARKNAQTA 1443 Query: 645 KR-YHQIGDLLHS 656 + Y + L Sbjct: 1444 QDKYAEEASKLAE 1456 >gi|331268963|ref|YP_004395455.1| arginyl-tRNA synthetase [Clostridium botulinum BKT015925] gi|329125513|gb|AEB75458.1| arginyl-tRNA synthetase [Clostridium botulinum BKT015925] Length = 563 Score = 38.1 bits (87), Expect = 4.9, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 43/108 (39%), Gaps = 5/108 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R IL E+ E++ L + E L V+ + + ++D + Sbjct: 451 TYARGKSILRRA----GEVQGEVNFAALNSQEEFNLVKVLGNLKEEVLGAIDKLEPSILT 506 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQYIKNIILIVINV 698 + + + F++ + +D V++ RL L++ +I +++ Sbjct: 507 RYIIDVAKAFNKFYNAHNIMATEDIAVKNARLKLVEATCQVIKNGLDL 554 >gi|169826545|ref|YP_001696703.1| arginyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] gi|168991033|gb|ACA38573.1| Arginyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] Length = 556 Score = 38.1 bits (87), Expect = 5.0, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 2/104 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL ++ + E + L E E L I DF + ++ H+ H+I Sbjct: 441 AHARISSILRSANEQGFAATSE-NLTLLTAEKEIDLLKKIGDFPQVVADAAKHRTPHRIA 499 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQYIKNIILI 694 + + F++ V ++E+ + RL+L+ ++ I Sbjct: 500 NYIQETAAAFHSFYNAEKVLDASNKELTEARLALITAVRTTIAN 543 >gi|261867613|ref|YP_003255535.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412945|gb|ACX82316.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 577 Score = 38.1 bits (87), Expect = 5.1, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 74/224 (33%), Gaps = 15/224 (6%) Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 ++ S + + W I K D + L G++ ++ + Sbjct: 333 ALVFSDTRQSQHMQQAWLITRKAGYVPDSFQLEHKNFGMMLGKDGKPFKTRSGDTVKLAD 392 Query: 534 LILFFHDRL------KLYLHDRDIRHDLIEAILRPENDNLLTIVDLI-KHLNEFFSSAKG 586 L+ +R K + D+IEA+ + I ++ ++ + Sbjct: 393 LLDEAIERAGVLISQKSTALSEQEKADVIEAVGIGSVKYADLSKNRITDYVFDWDNMLSF 452 Query: 587 EKFLL-----SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 E + RI I + E+ P L E E+ L + F IQ Sbjct: 453 EGNTAPYMQYAYTRIRSIFNRSQISPGEVKQA--PLTLTNEKERALAIKLLQFEEAIQLV 510 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSL 684 H + L+ + F++ + N +D++V+ +RL L Sbjct: 511 AKDGTPHILCAYLYELAGVFSSFYEHCPILNNEDQQVKLSRLKL 554 >gi|161618378|ref|YP_001592265.1| hypothetical protein BCAN_A0408 [Brucella canis ATCC 23365] gi|237814877|ref|ZP_04593875.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254718584|ref|ZP_05180395.1| hypothetical protein Bru83_03414 [Brucella sp. 83/13] gi|161335189|gb|ABX61494.1| Hypothetical protein, conserved [Brucella canis ATCC 23365] gi|237789714|gb|EEP63924.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] Length = 40 Score = 38.1 bits (87), Expect = 5.1, Method: Composition-based stats. Identities = 12/15 (80%), Positives = 14/15 (93%) Query: 1 MPDFLLEIYSEEIPA 15 MPD LLE++SEEIPA Sbjct: 4 MPDLLLELFSEEIPA 18 >gi|187927245|ref|YP_001897732.1| arginyl-tRNA synthetase [Ralstonia pickettii 12J] gi|309780055|ref|ZP_07674808.1| arginine--tRNA ligase [Ralstonia sp. 5_7_47FAA] gi|238691829|sp|B2UDW0|SYR_RALPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|187724135|gb|ACD25300.1| arginyl-tRNA synthetase [Ralstonia pickettii 12J] gi|308921225|gb|EFP66869.1| arginine--tRNA ligase [Ralstonia sp. 5_7_47FAA] Length = 596 Score = 38.1 bits (87), Expect = 5.2, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 40/106 (37%), Gaps = 10/106 (9%) Query: 597 FQILAIEEKKNREISLEISPQYL------LLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 +I ++ E+ + + S + L ++ F + ++ H + Sbjct: 480 ARICSVFERAGVDAASLTSADLAAVTGPDVSPQATALVQRLAAFPDMLADAARELAPHAV 539 Query: 651 GDLLHSICEPIEIFF--DQVLVNVDDREVRDNRLSLLQYIKNIILI 694 L + F+ D+VLV DD V+ RL+LL + ++ Sbjct: 540 AFYLRDLAGDFHAFYNADRVLV--DDEAVKRARLALLAATRQVLRN 583 >gi|163841986|ref|YP_001626391.1| valyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] gi|162955462|gb|ABY24977.1| valyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] Length = 873 Score = 38.1 bits (87), Expect = 5.2, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 62/194 (31%), Gaps = 25/194 (12%) Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRI-ILENKIDIPLSQF---IEDQNLILFFHD 540 ++ W+ +EK S P+ LR IIR + + + Q + + + D Sbjct: 534 QIVGGWSRDEKLFSSVFPFDLRPQGHDIIRTWLFSSAVRADSLQATAPWHNAAISGWILD 593 Query: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE---------KFLL 591 + + + +A+L + + L + + K L Sbjct: 594 PDRKKMSKSKGNVVVPDAVLHEFGADAVRYWAASAKLGADTAYEIAQIKIGRRLAIKLLN 653 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 ++K + + A E + P +K L A ++D ++ D Y + Sbjct: 654 ASKFVLNLGATE----SNVVNSADPVL-TNPLDKALLAQLADVVDQATKAFDSYDYAKAL 708 Query: 652 DLLHSICEPIEIFF 665 L E FF Sbjct: 709 QL-------TESFF 715 >gi|110800651|ref|YP_697280.1| putative phage infection protein [Clostridium perfringens ATCC 13124] gi|110675298|gb|ABG84285.1| putative phage infection protein [Clostridium perfringens ATCC 13124] Length = 721 Score = 38.1 bits (87), Expect = 5.2, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 62/161 (38%), Gaps = 13/161 (8%) Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRD 550 +N +++ +L + + +N I + LS+ + + D L +D Sbjct: 240 GLNNISQNAQNTGSLINTSKESLNSTFDN-IRLNLSESQTSLDKVQSNLDDLSSMAND-- 296 Query: 551 IRHDLIEAILRPENDNLLTIVDLIKHLNEF-------FSSAKGEKFLLSAKRIFQILAIE 603 I A++ + + + + + + F ++ K + S K + LA E Sbjct: 297 ASSAKINALISKSINEIDKVDNSVTAVINFLDAINKKIANEKIANMITSLKNVQNSLAEE 356 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + K ++ +++ +K L + ISD I+ +D+ Sbjct: 357 KTKLNDLQSKVNSG---QNVDKGLLSSISDLTKKIEGQVDN 394 >gi|28210674|ref|NP_781618.1| arginyl-tRNA synthetase [Clostridium tetani E88] gi|38372518|sp|Q896N5|SYR_CLOTE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|28203112|gb|AAO35555.1| arginyl-tRNA synthetase [Clostridium tetani E88] Length = 563 Score = 38.1 bits (87), Expect = 5.3, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 45/108 (41%), Gaps = 5/108 (4%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 S R IL K+ EI ++ L + E L + F I ++++ + Sbjct: 451 SYARGKSILR----KSGEIQGDVDYSKLNSKEEFELVKTLEGFNKSILQAIEKLEPSIVT 506 Query: 652 DLLHSICEPIEIFFDQVLV-NVDDREVRDNRLSLLQYIKNIILIVINV 698 + + + F++ + N +D E++ R+ L++ +I +N+ Sbjct: 507 RYVIEVAKAFNKFYNHNSILNAEDEEIKKARIKLVESTCQVIKNALNL 554 >gi|238650597|ref|YP_002916449.1| hypothetical protein RPR_03060 [Rickettsia peacockii str. Rustic] gi|238624695|gb|ACR47401.1| hypothetical protein RPR_03060 [Rickettsia peacockii str. Rustic] Length = 355 Score = 38.1 bits (87), Expect = 5.4, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 51/151 (33%), Gaps = 8/151 (5%) Query: 519 NKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++ +S E L ++ + R L + + I I LN Sbjct: 45 YGLNFDISNLKETAETKLKNYEVEQSIEKARVQEEFLKSQRVIKLAEEEKEIAQRIAALN 104 Query: 579 ----EFFS--SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 EF + ++ S KR+ +I+ EK+N E++ + L E +L Sbjct: 105 NLYNEFIKNITKDTKRIEESNKRLDKIINKLEKENIIDHEELNREILTHEEIFKLNQAYK 164 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 + ++ + Q L+ + + I Sbjct: 165 VLHKNHKKITEEH--KQAHTELNELNKTITN 193 >gi|299537939|ref|ZP_07051225.1| arginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] gi|298726521|gb|EFI67110.1| arginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] Length = 555 Score = 38.1 bits (87), Expect = 5.4, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 2/104 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL ++ + E L E E L I DF + E+ H+ H+I Sbjct: 440 AHARISSILRSANEQGFAATTE-HLNLLTAEKEIDLLKKIGDFPKVVAEAAKHRTPHRIA 498 Query: 652 DLLHSICEPIEIFFDQVLVNV-DDREVRDNRLSLLQYIKNIILI 694 + + F++ V ++E+ + RL+L+ ++ I Sbjct: 499 NYIQETAAAFHSFYNAEKVLDASNKELTEARLALITAVRTTIAN 542 >gi|291541511|emb|CBL14621.1| arginyl-tRNA synthetase [Ruminococcus bromii L2-63] Length = 578 Score = 38.1 bits (87), Expect = 5.4, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 2/106 (1%) Query: 592 SAKRIFQILAIEEKKNREISLEISP--QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + RI I K+ L EK L ++ + I + + Sbjct: 461 AHARICSIFKSLAKEGISPRECTDAELALLTAPEEKELINHLASYTNEIISAAKDYDPTK 520 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + + F++ V ++ + RL+L ++ +I V Sbjct: 521 VTRYVTQLATLFHKFYNACRVKGEEEGLMQARLALCNCVRAVIKNV 566 >gi|156742946|ref|YP_001433075.1| metal dependent phosphohydrolase [Roseiflexus castenholzii DSM 13941] gi|156234274|gb|ABU59057.1| metal dependent phosphohydrolase [Roseiflexus castenholzii DSM 13941] Length = 172 Score = 38.1 bits (87), Expect = 5.6, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 7/101 (6%) Query: 386 QGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQ 445 + + ++R + +++L+ AD+ RA +L + + G++ +A Q Sbjct: 32 KHDHLTRSVRMSYHLSRLLRADIRTCVRAALLHDINSRAGTLT----THGRVAARWAAAQ 87 Query: 446 NENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTL 486 E+ + C AIE H+ P GP P ++ + + LADK +L Sbjct: 88 GEDPAVCAAIESHMYPLGPA---PASREAWVLVLADKAASL 125 >gi|311693359|gb|ADP96232.1| arginyl-tRNA synthetase [marine bacterium HP15] Length = 561 Score = 38.1 bits (87), Expect = 5.7, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 3/110 (2%) Query: 592 SAKRIFQILAIEEKKNREISLEI---SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + RI +L ++ E S L L+ EK L ++ + I S + H Sbjct: 443 AHARICSVLRKLAEEGVERSRNECIGDLSLLTLDEEKDLANQLAKYPELIANSAAQREPH 502 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + L + +++ V ++D VRD R+SL I+ +I +++ Sbjct: 503 HLTHYLRDLAGQFHTYYNAHKVLIEDTAVRDARVSLYLAIRQVIANGLDL 552 >gi|319789529|ref|YP_004151162.1| excinuclease ABC, B subunit [Thermovibrio ammonificans HB-1] gi|317114031|gb|ADU96521.1| excinuclease ABC, B subunit [Thermovibrio ammonificans HB-1] Length = 663 Score = 38.1 bits (87), Expect = 5.9, Method: Composition-based stats. Identities = 18/160 (11%), Positives = 44/160 (27%), Gaps = 22/160 (13%) Query: 515 IILENKIDIPLSQFIEDQNLILF-FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 +L +D+P + + F + + + D + + Sbjct: 503 NLLREGLDLPEVSLVAILDADKEGFLRSTTSLIQTMGRAARNVNGKVILFADRVTPSMKR 562 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE----------- 622 + + K + R I K+ E S+ LE Sbjct: 563 A-----IEETQRRRKIQEAYNREHNITPQTVKRELEPSILEDAGLSALERIKRKGIEEVP 617 Query: 623 -AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 E+ L+ +I ++E+ + + + + + I Sbjct: 618 KNEEELFELIEKLEKEMKEAAKNWEFERA----AELRDKI 653 >gi|303236237|ref|ZP_07322833.1| arginine--tRNA ligase [Prevotella disiens FB035-09AN] gi|302483551|gb|EFL46550.1| arginine--tRNA ligase [Prevotella disiens FB035-09AN] Length = 615 Score = 37.7 bits (86), Expect = 6.3, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 1/104 (0%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL + I + L E E L ++DFG + ++ I Sbjct: 499 TYARIRSILRKANAQGINIPATVEANAPLNEKEIALIQKMNDFGAAVAQAGVDYSPSGIA 558 Query: 652 DLLHSICEPIEIFF-DQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + + + F+ D ++N D + + RL L Q + +I Sbjct: 559 NYCYELTKEFNQFYHDYSILNADTEDEKTTRLVLAQNVAKVIKN 602 >gi|228475105|ref|ZP_04059832.1| arginine--tRNA ligase [Staphylococcus hominis SK119] gi|314937074|ref|ZP_07844421.1| arginine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] gi|228270869|gb|EEK12266.1| arginine--tRNA ligase [Staphylococcus hominis SK119] gi|313655693|gb|EFS19438.1| arginine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] Length = 553 Score = 37.7 bits (86), Expect = 6.4, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 35/85 (41%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL ++K EI + E L +++F I+ + + + H++ Sbjct: 438 AHARICSILKQAKEKGIEIDKNADFSTITNEKAIDLLKKVAEFEPTIESAAESRAPHRLT 497 Query: 652 DLLHSICEPIEIFFDQVLVNVDDRE 676 + + + F++ V DD E Sbjct: 498 NYIQDLASAFHKFYNAEKVLSDDIE 522 >gi|227823418|ref|YP_002827391.1| glycogen phosphorylase [Sinorhizobium fredii NGR234] gi|227342420|gb|ACP26638.1| glycogen phosphorylase [Sinorhizobium fredii NGR234] Length = 821 Score = 37.7 bits (86), Expect = 6.4, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 36/104 (34%), Gaps = 8/104 (7%) Query: 521 IDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEA-------ILRPENDNLLTIVDL 573 + L + NL + DR+ + R L++ I D + + Sbjct: 451 LHTDLMKETVFANLHKLYPDRINNKTNGITPRRWLMQCNPGLFGLIRDAIGDEFMDNTEA 510 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQ 617 ++ L+ F A ++ + KR + + + + + + P Sbjct: 511 LQALDAFADKADFQEQFAAVKRA-NKVKLAKLVQASLGIRLDPS 553 >gi|325849222|ref|ZP_08170673.1| DNA primase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480222|gb|EGC83289.1| DNA primase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 553 Score = 37.7 bits (86), Expect = 6.5, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 62/194 (31%), Gaps = 32/194 (16%) Query: 507 RATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRD-IRHDLIEAILRPEND 565 +AT I I+L+ I + + + F +K Y D + D + + + Sbjct: 307 KATDRAIEILLDEGIKPNIISLEKGLDPDDF----VKKYGRDAFIKKMDEASDVYNYKYN 362 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL---- 621 +L I K +F +FL S K + N +I L Sbjct: 363 KILDIYASSKENEKFEKLNLFIEFLASIK--SDLTREIFVNNVSKLFDIDKSTLKESVLK 420 Query: 622 --EAEKRLYAV-------ISDFGTHIQESMDHKRYHQIGDLLHSICEPIE---------I 663 + K+ + + ++ K+Y + L ++ + Sbjct: 421 YNDNYKKTFNKKFSDESSFKKNNKNQSVLVERKKYSVSINELETLRLYLNQRDDYKEFED 480 Query: 664 FFDQVLVNVDDREV 677 FFDQVLV D + Sbjct: 481 FFDQVLV---DENI 491 >gi|300867420|ref|ZP_07112075.1| Arginyl-tRNA synthetase [Oscillatoria sp. PCC 6506] gi|300334610|emb|CBN57243.1| Arginyl-tRNA synthetase [Oscillatoria sp. PCC 6506] Length = 581 Score = 37.7 bits (86), Expect = 6.5, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 1/96 (1%) Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L + R+ I E + + L +AE L + + + Sbjct: 464 LLYAYVRVKGIGRKGEINFDNLGADAKV-ILKEDAELVLAKHLLQLSEVVGAVEGDLLPN 522 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 +I L + + FF+Q V + +R +RL L Sbjct: 523 RICQYLFELSQKFNQFFEQCPVLKSEEPLRTSRLVL 558 >gi|169840229|ref|ZP_02873417.1| hypothetical protein cdivTM_24365 [candidate division TM7 single-cell isolate TM7a] Length = 29 Score = 37.7 bits (86), Expect = 6.6, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 16/25 (64%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSI 27 +FL EI EE+PA+ KA ++L Sbjct: 5 NFLFEIGLEELPAQYVDKAEKELKK 29 >gi|270339605|ref|ZP_06005404.2| arginine-tRNA ligase [Prevotella bergensis DSM 17361] gi|270334434|gb|EFA45220.1| arginine-tRNA ligase [Prevotella bergensis DSM 17361] Length = 615 Score = 37.7 bits (86), Expect = 6.7, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 1/101 (0%) Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 RI IL E + I E+ L E E L + +F ++++ ++ I + Sbjct: 502 RIRSILRKAEAEGITIPAELPADSPLNEKEISLIQKLDEFKVAVKDAGENYNPAGIANYC 561 Query: 655 HSICEPIEIFF-DQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + + F+ D ++N D + RL L + I Sbjct: 562 YELTKDFNQFYHDYSILNADTEAQKITRLVLAANVAKTIKN 602 >gi|291295460|ref|YP_003506858.1| leucyl-tRNA synthetase [Meiothermus ruber DSM 1279] gi|290470419|gb|ADD27838.1| leucyl-tRNA synthetase [Meiothermus ruber DSM 1279] Length = 875 Score = 37.7 bits (86), Expect = 6.7, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 28/72 (38%), Gaps = 1/72 (1%) Query: 593 AKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD 652 R+++++A + + + + P L K LY + + E ++ R++ Sbjct: 685 LNRVYRLVAEQRVELKAQPDLLEPATLEGPH-KALYQKLHQTIKKVTEDLEALRFNTAIA 743 Query: 653 LLHSICEPIEIF 664 L + + + Sbjct: 744 ALMELLNALGDY 755 >gi|291279741|ref|YP_003496576.1| arginyl-tRNA synthetase [Deferribacter desulfuricans SSM1] gi|290754443|dbj|BAI80820.1| arginyl-tRNA synthetase [Deferribacter desulfuricans SSM1] Length = 543 Score = 37.7 bits (86), Expect = 6.7, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 41/101 (40%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + R+ + +K E L + L L+ EK + I + I+ + H H+I Sbjct: 428 AHARVNSLFENAIEKGVEFRLAENLDKLTLDQEKEIIKKIDELKKVIKAAATHLEPHRIS 487 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 L + ++ + DD E+ + RL+L + + I Sbjct: 488 YYLQELASLFHNYYYNFKIISDDYELTNARLNLAKAVAKTI 528 >gi|325266292|ref|ZP_08132971.1| aminopeptidase N [Kingella denitrificans ATCC 33394] gi|324982254|gb|EGC17887.1| aminopeptidase N [Kingella denitrificans ATCC 33394] Length = 895 Score = 37.7 bits (86), Expect = 6.8, Method: Composition-based stats. Identities = 31/245 (12%), Positives = 71/245 (28%), Gaps = 36/245 (14%) Query: 441 YAVLQNENISCCDAIEE----HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKP 496 Y+ + D+++ H +++P + ADK ++ Sbjct: 446 YSQAGTPVLDVSDSLQSEGSLHTYTLHVKQSLPDTPD---MPAADKRPMMMPLAVALLDE 502 Query: 497 SGSKDPYALRRATLG-IIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDL 555 +G K P+AL + + + + + L Q++ L+ + + D Sbjct: 503 NGEKIPFALSGSLHTETVLTVNQAEQTYELQLARPVQSVTPSL---LRGFSAPVHLHFDY 559 Query: 556 IEAILR---PENDNLL-------TIVDLIKHLNEFF-----SSAKGEKFLLSAKRIFQIL 600 +A L +D+ T+ NE + + +RI Sbjct: 560 TDAQLAHLLAHDDDPFARWEAGQTLYRRAIAANEAALENGTDLPEHAALAEALRRILN-- 617 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS--IC 658 ++ I L + AE L+ + + + + LH + Sbjct: 618 ------DQSIDPAFKALLLQVPAESELWDGRTRIDPVRTAAAREALHEALAGSLHGELLA 671 Query: 659 EPIEI 663 + Sbjct: 672 AALNA 676 >gi|15893111|ref|NP_360825.1| hypothetical protein RC1188 [Rickettsia conorii str. Malish 7] gi|15620317|gb|AAL03726.1| unknown [Rickettsia conorii str. Malish 7] Length = 365 Score = 37.7 bits (86), Expect = 6.8, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 52/155 (33%), Gaps = 15/155 (9%) Query: 519 NKIDIPLSQFIEDQNLILFFHDRL----KLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++ +S E L ++ K + + + L E I I Sbjct: 54 YGLNFDISNLKETAETKLKHYEVEQSIEKARVQEEEFLKSQRAIKLAEEEK---EIAQRI 110 Query: 575 KHLN----EFFS--SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 LN EF + ++ S KR+ +I+ EK+N E++ + L E +L Sbjct: 111 AALNNLHNEFIKNITKDTKRIEESNKRLDKIINKLEKENIIDHEELNREILTHEEIFKLN 170 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 + ++ + Q L+ + + I Sbjct: 171 QAYKVLHKNHKKITEEH--KQAHTELNELNKTITN 203 >gi|219847675|ref|YP_002462108.1| metal dependent phosphohydrolase [Chloroflexus aggregans DSM 9485] gi|219541934|gb|ACL23672.1| metal dependent phosphohydrolase [Chloroflexus aggregans DSM 9485] Length = 187 Score = 37.7 bits (86), Expect = 7.0, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 7/106 (6%) Query: 386 QGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQ 445 + + + R +A AD RA +L D + G I A Sbjct: 28 KHDHLLRSVHFSYYLALFFGADQVTCVRAALLHDLDSRYGTLT----THGAIAARVAAEL 83 Query: 446 NENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 E+ + AI H+ P GP PT + +++ADKL +L + A Sbjct: 84 GESEAVSAAIISHMYPFGPR---PTTREGWVLAVADKLASLADLGA 126 >gi|262184348|ref|ZP_06043769.1| hypothetical protein CaurA7_10183 [Corynebacterium aurimucosum ATCC 700975] Length = 437 Score = 37.7 bits (86), Expect = 7.4, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 5/90 (5%) Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 E++G +A E H +P P V + ++ TL F Sbjct: 328 DEVRGMSDLIHAAHAAVGPDVACNEEWHHRPPSVDLPQP-----WRVMIKLRVSTLAGFE 382 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENK 520 + + DP+ LR + + + E Sbjct: 383 GGTKVYINTIDPWGLRDRVVDAMFRLRERG 412 >gi|227833362|ref|YP_002835069.1| hypothetical protein cauri_1538 [Corynebacterium aurimucosum ATCC 700975] gi|227454378|gb|ACP33131.1| hypothetical protein cauri_1538 [Corynebacterium aurimucosum ATCC 700975] Length = 423 Score = 37.7 bits (86), Expect = 7.4, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 5/90 (5%) Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 E++G +A E H +P P V + ++ TL F Sbjct: 314 DEVRGMSDLIHAAHAAVGPDVACNEEWHHRPPSVDLPQP-----WRVMIKLRVSTLAGFE 368 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENK 520 + + DP+ LR + + + E Sbjct: 369 GGTKVYINTIDPWGLRDRVVDAMFRLRERG 398 >gi|124003120|ref|ZP_01687971.1| 7TM diverse intracellular signalling domain protein [Microscilla marina ATCC 23134] gi|123991770|gb|EAY31178.1| 7TM diverse intracellular signalling domain protein [Microscilla marina ATCC 23134] Length = 700 Score = 37.7 bits (86), Expect = 7.9, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 32/101 (31%), Gaps = 15/101 (14%) Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA------E--KRLYAVI 631 K + + + E K +E + EI Q +EA E K L Sbjct: 380 ILKKEKDAALAQNLSLVTNQKEVLENKVKERTWEIQEQKEEMEAQNQMMKETHKALKEAY 439 Query: 632 SDFGTHIQESMDHKRYHQIG-DLLHSICEPI------EIFF 665 + Q + Y Q + L S+ + + + FF Sbjct: 440 QEINKKNQNLLASINYAQTIQNALLSLRKGVVNALGADNFF 480 >gi|302345955|ref|YP_003814308.1| arginine--tRNA ligase [Prevotella melaninogenica ATCC 25845] gi|302150153|gb|ADK96415.1| arginine--tRNA ligase [Prevotella melaninogenica ATCC 25845] Length = 606 Score = 37.3 bits (85), Expect = 8.1, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL E +N + ++ L E E L ++DFG + ++ I Sbjct: 490 TYARIRSILRKAEAQNITLPASLNDDAPLNEKEIALIQKLNDFGAAVAQAGIDYSPSGIA 549 Query: 652 DLLHSICEPIEIFF-DQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + + + F+ D ++N D + RL + + + +I Sbjct: 550 NYCYELTKEFNQFYHDYSILNADTEAEKITRLMIAKNVAKVIKN 593 >gi|160896118|ref|YP_001561700.1| arginyl-tRNA synthetase [Delftia acidovorans SPH-1] gi|238687178|sp|A9BRF4|SYR_DELAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|160361702|gb|ABX33315.1| arginyl-tRNA synthetase [Delftia acidovorans SPH-1] Length = 565 Score = 37.3 bits (85), Expect = 8.1, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 52/174 (29%), Gaps = 30/174 (17%) Query: 524 PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L ++ + F R D + D+ A+ NDN + V Sbjct: 406 DLIEWTSKDAVRFFLLSR----KPDTEYTFDVDLAV-AQNNDNPVYYVQYAHA------- 453 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL---YAVISDFGTHIQE 640 RI +LA + ++ L + L A T E Sbjct: 454 -----------RICSVLA-AWGGDAATLKDVDLSALEGPQAQALMLQLAKYPAMLTSAAE 501 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 L S+ ++D + VDD +V+ RL+L+ + ++ Sbjct: 502 GNAPHDVTFYLRELASLY---HSYYDAERILVDDEKVKLARLALISATRQVLHN 552 >gi|292654504|ref|YP_003534401.1| arginyl-tRNA synthetase [Haloferax volcanii DS2] gi|291371974|gb|ADE04201.1| arginyl-tRNA synthetase [Haloferax volcanii DS2] Length = 587 Score = 37.3 bits (85), Expect = 8.2, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 1/96 (1%) Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 I + S E P L +AE+ L A I+ F ++ + D H + + Sbjct: 480 IADEAATAGLDAS-EADPAVLTTDAERDLLATIARFPAVVETAADDLEPHTVATFARELA 538 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 E F+ + V D EV RL+L++ +N + Sbjct: 539 EVFNTFYRECPVLDADEEVGAARLALVEASRNAVAN 574 >gi|220979983|emb|CAP72175.1| Putative DNA helicase [Escherichia coli LF82] gi|323934255|gb|EGB30679.1| hypothetical protein ERCG_04416 [Escherichia coli E1520] Length = 446 Score = 37.3 bits (85), Expect = 8.3, Method: Composition-based stats. Identities = 12/97 (12%), Positives = 27/97 (27%), Gaps = 14/97 (14%) Query: 561 RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS-PQYL 619 P + +L ++ K ++ + + KR ILA +K + S + Sbjct: 68 APSSSAILDMLKRAKR-DKTIREELFADVVAAFKR---ILA---EKLSDTSYMVDQVSTF 120 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 D E + + ++ Sbjct: 121 AKSV------AFDDALIKAAELKEKGDFQGAMAIMAK 151 >gi|168217357|ref|ZP_02642982.1| putative phage infection protein [Clostridium perfringens NCTC 8239] gi|182380576|gb|EDT78055.1| putative phage infection protein [Clostridium perfringens NCTC 8239] Length = 721 Score = 37.3 bits (85), Expect = 8.4, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 51/132 (38%), Gaps = 12/132 (9%) Query: 520 KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 I + LS+ + + D L +D I A++ + + + + + + Sbjct: 268 NIRLNLSESQTSLDKVQSNLDDLSSMAND--ASSAKINALISKSINEIDKVDNSVTAVIN 325 Query: 580 F-------FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 F ++ K + S K + LA E+ K ++ +++ +K L + IS Sbjct: 326 FLDAINKKIANEKIANMITSLKNVQNSLAEEKTKLNDLQSKVNSD---QNVDKGLLSSIS 382 Query: 633 DFGTHIQESMDH 644 D I+ +D+ Sbjct: 383 DLTKKIEGQVDN 394 >gi|309390229|gb|ADO78109.1| arginyl-tRNA synthetase [Halanaerobium praevalens DSM 2228] Length = 553 Score = 37.3 bits (85), Expect = 8.5, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 47/104 (45%), Gaps = 4/104 (3%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI I+ E + + +L L E+E L +++ F I+ S + ++ H + Sbjct: 442 AHARIHSIIDNSELEAKAENL----DLLTHESEIALMKMLAKFPEEIKMSAESRQPHHLT 497 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + F++ VN D +E+ + RL L+ + ++ V Sbjct: 498 TYAYDLATEFHSFYNNCRVNTDSKELAEARLYLVNAARQVLKNV 541 >gi|290958345|ref|YP_003489527.1| arginyl-tRNA synthetase [Streptomyces scabiei 87.22] gi|260647871|emb|CBG70976.1| putative arginyl-tRNA synthetase [Streptomyces scabiei 87.22] Length = 589 Score = 37.3 bits (85), Expect = 8.6, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 5/94 (5%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL E P+ L AE+ L + FG + E + H++ Sbjct: 477 AYARIQSILRKA----GEAGPAAHPELELAPAERALGLHLDQFGEAVAEVAESYEPHKLA 532 Query: 652 DLLHSICEPIEIFFDQVLVN-VDDREVRDNRLSL 684 L + + F+DQ V + +NRL L Sbjct: 533 AYLFRLATLLTSFYDQCPVLKAESPAQVENRLFL 566 >gi|328947509|ref|YP_004364846.1| arginyl-tRNA synthetase [Treponema succinifaciens DSM 2489] gi|328447833|gb|AEB13549.1| Arginyl-tRNA synthetase [Treponema succinifaciens DSM 2489] Length = 609 Score = 37.3 bits (85), Expect = 8.7, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 595 RIFQILAIEEKKNREISLEI-SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 RI IL +++ E S + L E+E L + F + +Q+S + + Sbjct: 493 RIASILRKAKEQGLEPSSSVEDFSLLTAESEWALIKDLERFPSIVQKSAETLDPSGMASY 552 Query: 654 LHSICEPIEIFF-DQVLV--NVDDREVRDNRLSL----LQYIKNIILIV 695 L+ + + F+ D +V ++ + RL+L L +K+ + +V Sbjct: 553 LYDVSKSFSAFYRDCPIVGTASENERLAKARLALAQCTLSVLKSGMDLV 601 >gi|309797668|ref|ZP_07692055.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|308118765|gb|EFO56027.1| conserved hypothetical protein [Escherichia coli MS 145-7] Length = 446 Score = 37.3 bits (85), Expect = 8.8, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 27/96 (28%), Gaps = 14/96 (14%) Query: 561 RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS-PQYL 619 P + +L ++ K ++ + + KR ILA +K + S + Sbjct: 68 APSSSAILDMLKRAKR-DKTIREELFADVVAAFKR---ILA---EKLSDTSYMVDQVSTF 120 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 D E + + ++ Sbjct: 121 AKSV------AFDDALIKAAELKEKGDFQGAMAIMA 150 >gi|315426742|dbj|BAJ48366.1| arginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum] Length = 624 Score = 37.3 bits (85), Expect = 8.9, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 8/100 (8%) Query: 592 SAKRIFQILAIEEK--KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + R +IL + + + P+ E L I +E++ + + Sbjct: 513 AYARATRILEKADTQPNPQNPPTTLDPK------EIMLIKQIGMLPLVYEEAVRNLSVKR 566 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I L + F++ V D +V+ RL+L++ + Sbjct: 567 IATYLRELAFAFNDFYENCPVLSADEKVKVFRLALVEAFR 606 >gi|149377307|ref|ZP_01895053.1| arginyl-tRNA synthetase [Marinobacter algicola DG893] gi|149358404|gb|EDM46880.1| arginyl-tRNA synthetase [Marinobacter algicola DG893] Length = 561 Score = 37.3 bits (85), Expect = 9.0, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 49/110 (44%), Gaps = 3/110 (2%) Query: 592 SAKRIFQILAI--EEKKNREISLEI-SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + RI +L EE R ++ + L L+ EK L ++ + I+ S + H Sbjct: 443 AHARICSVLRKLKEEGVERGLNECVGDLSLLTLDEEKDLANQLAKYPELIESSAKLREPH 502 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + L + +++ V ++D +RD R+SL ++ +I +++ Sbjct: 503 HLTHYLRDLAGQFHTYYNAHKVLIEDTAIRDARVSLYLAVRQVIANGLDL 552 >gi|146306437|ref|YP_001186902.1| methionyl-tRNA synthetase [Pseudomonas mendocina ymp] gi|187647744|sp|A4XS54|SYM_PSEMY RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|145574638|gb|ABP84170.1| methionyl-tRNA synthetase [Pseudomonas mendocina ymp] Length = 678 Score = 37.3 bits (85), Expect = 9.2, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 13/123 (10%) Query: 537 FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 F R L + + + L D+L +L +F + Sbjct: 339 FIKARTYLDHLNPEYLRYYYASKLGRGVDDLDL------NLEDFVQKVNSDLVGKVVNIA 392 Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 + K N + + +P E L+ I E+ + + + + + + Sbjct: 393 SRCAGFIHKGNDGLLVAANP-------EPELWDAFQAAAPSIAEAYEARDFSRAMREIMA 445 Query: 657 ICE 659 + + Sbjct: 446 LAD 448 >gi|257870471|ref|ZP_05650124.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257804635|gb|EEV33457.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 388 Score = 37.3 bits (85), Expect = 9.2, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 27/82 (32%) Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + + K E++ + S E +AEK L + + Sbjct: 111 LNDATEQQVVVKAALNDQKKEQEVLIKPSKEFVAYLEAEKAEKELIKQVETALALAESKP 170 Query: 643 DHKRYHQIGDLLHSICEPIEIF 664 K Y + L+HS+ + + + Sbjct: 171 TQKNYDEAATLVHSLSKTYDDY 192 >gi|310829664|ref|YP_003962021.1| arginyl-tRNA synthetase [Eubacterium limosum KIST612] gi|308741398|gb|ADO39058.1| arginyl-tRNA synthetase [Eubacterium limosum KIST612] Length = 563 Score = 37.3 bits (85), Expect = 9.4, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 1/107 (0%) Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + RI IL +++ + L + E L ++S+ I + + +I Sbjct: 449 AHARICSILRQ-MAEDKNTEGPANLTLLREKEELTLLDMLSNLPNEIIVAEEKMDPSRIT 507 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + F++ V V+D E+ RL+L++ K ++ V+ + Sbjct: 508 HYAMDLAAAFHSFYNACRVRVEDIELMKARLALIKGTKQVLANVLEI 554 >gi|153854478|ref|ZP_01995756.1| hypothetical protein DORLON_01751 [Dorea longicatena DSM 13814] gi|149753004|gb|EDM62935.1| hypothetical protein DORLON_01751 [Dorea longicatena DSM 13814] Length = 667 Score = 37.3 bits (85), Expect = 9.4, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 39/98 (39%), Gaps = 7/98 (7%) Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK-KNREISLEISPQYLLLEAEKR 626 L + + ++ G K + ++A+ +K E+ +E P+ + +EK Sbjct: 568 LDETQRRREVQMAYNEEHGITPKTIQKAVRDLIAVSKKVAASEVQMEKDPESM---SEKE 624 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDL---LHSICEPI 661 L +I + ++++ + +L L + + + Sbjct: 625 LEKLIKELEKQMKKAAADLNFEAAAELRDKLIELKKTL 662 >gi|220933450|ref|YP_002512349.1| Arginine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7] gi|254782990|sp|B8GU79|SYR_THISH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219994760|gb|ACL71362.1| Arginine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7] Length = 586 Score = 37.3 bits (85), Expect = 9.5, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 3/106 (2%) Query: 592 SAKRIFQILAIEEKKNREIS---LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + R+ +L E K + E L E+ + A ++ F I+ + + H Sbjct: 468 AHARVCSVLRQMEAKGLKHDPSHGEAKLSLLTESHEQEILATLARFPEVIEAAALVEEPH 527 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 QI + L + +++ VD+ +RD RLSL+ ++ +I Sbjct: 528 QIANYLRELANDFHTYYNAHQFLVDEPAIRDARLSLILAVRQVIAN 573 >gi|72161209|ref|YP_288866.1| metal-dependent phosphohydrolase, HD region [Thermobifida fusca YX] gi|123629942|sp|Q47RS4|CNPD_THEFY RecName: Full=2',3'-cyclic-nucleotide 2'-phosphodiesterase gi|71914941|gb|AAZ54843.1| metal-dependent phosphohydrolase, HD region [Thermobifida fusca YX] Length = 501 Score = 37.3 bits (85), Expect = 9.6, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 31/99 (31%), Gaps = 7/99 (7%) Query: 385 TQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVL 444 + L +A + ADV L R +L D+ + E IG + A Sbjct: 315 NVLAHLVESAHLAGMMAAELGADVPLAKRCALLH--DIGKALTHEVEGSHAVIGAQLARR 372 Query: 445 QNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 E AIE H E ++ AD + Sbjct: 373 YGECEEVAHAIEAHH-----NEVEARTVEAVLTQAADAI 406 >gi|225457168|ref|XP_002283818.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 596 Score = 37.3 bits (85), Expect = 9.8, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 26/201 (12%) Query: 426 IVREFPELQGKIGKEYAVL-QNENISCCD-AIEEHLKPRGPLENVPTNKISITVSLADKL 483 +V + P+ +I A L Q E ++ EHL + + V D L Sbjct: 276 VVLKNPDAVLQILFYCAQLSQEEAAEIAQRSLHEHLAY---ENELQESLGMQNVVYLDSL 332 Query: 484 DTL---------INFWAINEKPSGSKDPYALRRATLGIIRIILEN--------KIDIPLS 526 + L A+N+ + LR A R + KI+ L Sbjct: 333 EDLPLSSNGGPATVNIALNDLGLSPQARLCLRAAGGFENRRLRNQVKIDDNKQKINDELR 392 Query: 527 QFIEDQNLILF----FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + + Q ++D K D ++ +L D ++ ++ + +EF + Sbjct: 393 KLKDYQEKAETRKLGYYDAFKHQEEKADFDANVSRLVLAGIWDEIIEMLRRYELPDEFEN 452 Query: 583 SAKGEKFLLSAKRIFQILAIE 603 + + +RI + L I Sbjct: 453 RKELIELATIYRRIVEPLDIA 473 >gi|42523229|ref|NP_968609.1| methionyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100] gi|68565985|sp|Q6MMA3|SYM_BDEBA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gi|39575434|emb|CAE79602.1| metG [Bdellovibrio bacteriovorus HD100] Length = 687 Score = 37.3 bits (85), Expect = 9.9, Method: Composition-based stats. Identities = 9/88 (10%), Positives = 33/88 (37%), Gaps = 2/88 (2%) Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE-KRLYAVISDFGTHIQ 639 + + S + + +I + + + + ++ + + +AE K+L I Sbjct: 369 LNLEDFTNRVNS-ELVGKITNLGSRGGQMLKKKMDGKMSVPDAEGKKLIEHAQKTAESIA 427 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 + + + + + + + +FD+ Sbjct: 428 AHYEARDFAKALGEIRGLADDANKYFDE 455 >gi|156066387|gb|ABU43059.1| enhanced disease susceptibility 1 [Vitis vinifera] Length = 596 Score = 37.3 bits (85), Expect = 10.0, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 26/201 (12%) Query: 426 IVREFPELQGKIGKEYAVL-QNENISCCD-AIEEHLKPRGPLENVPTNKISITVSLADKL 483 +V + P+ +I A L Q E ++ EHL + + V D L Sbjct: 276 VVLKNPDAVLQILFYCAQLSQEEAAEIAQRSLHEHLAY---ENELQESLGMQNVVYLDSL 332 Query: 484 DTL---------INFWAINEKPSGSKDPYALRRATLGIIRIILEN--------KIDIPLS 526 + L A+N+ + LR A R + KI+ L Sbjct: 333 EDLPLSSNGGPATVNIALNDLGLSPQARLCLRAAGGFENRRLRNQVKIDDNKQKINDELR 392 Query: 527 QFIEDQNLILF----FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + + Q ++D K D ++ +L D ++ ++ + +EF + Sbjct: 393 KLKDYQEKAETRKLGYYDAFKHQEEKADFDANVSRLVLAGIWDEIIEMLRRYELPDEFEN 452 Query: 583 SAKGEKFLLSAKRIFQILAIE 603 + + +RI + L I Sbjct: 453 RKELIELATIYRRIVEPLDIA 473 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.313 0.137 0.384 Lambda K H 0.267 0.0418 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,269,587,347 Number of Sequences: 14124377 Number of extensions: 232750919 Number of successful extensions: 759846 Number of sequences better than 10.0: 2208 Number of HSP's better than 10.0 without gapping: 1798 Number of HSP's successfully gapped in prelim test: 410 Number of HSP's that attempted gapping in prelim test: 742388 Number of HSP's gapped (non-prelim): 2514 length of query: 702 length of database: 4,842,793,630 effective HSP length: 146 effective length of query: 556 effective length of database: 2,780,634,588 effective search space: 1546032830928 effective search space used: 1546032830928 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 85 (37.3 bits)