RPSBLAST alignment for GI: 254781094 and conserved domain: TIGR00211
>gnl|CDD|161766 TIGR00211, glyS, glycyl-tRNA synthetase, tetrameric type, beta subunit. The glycyl-tRNA synthetases differ even among the eubacteria in oligomeric structure. In Escherichia coli and most others, it is a heterodimer of two alpha chains and two beta chains, encoded by tandem genes. The genes are similar, but fused, in Chlamydia trachomatis. By contrast, the glycyl-tRNA synthetases of Thermus thermophilus and of archaea and eukaryotes differ considerably; they are homodimeric, mutually similar, and not detected by this model. Length = 691
Score = 419 bits (1078), Expect = e-117
Identities = 231/725 (31%), Positives = 372/725 (51%), Gaps = 63/725 (8%)
Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62
FL+EI +EE+PA+ A + L L + G+ + N+ + TP RL + +K L+
Sbjct: 5 TFLVEIGTEELPAKALRSLATQFADKLTAELNKAGLEHGNVEIFATPRRLAVLVKDLAEL 64
Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115
P++ EE+ GP V GK KA GF + G+ + D +I + K +++ + +
Sbjct: 65 QPDRKEEKKGPAVKIAFDADGKPTKAALGFAKGQGI-NVEDAEIFQTDKGEWLFVRKIHE 123
Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175
+ +D+L +V + K+P+PKSMRW +IRP+ I+ +L + +
Sbjct: 124 -GQPTKDLLPPLVLEFLAKLPFPKSMRWGN-----VDVRFIRPIHWIVVLL-----GDDV 172
Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235
I +++ + T GHRF + ++S D Y L+E V+ DP+ R+ IL L
Sbjct: 173 IPIEILNVKSDRTTRGHRFLGEDEVSIESPDAYPEQLKENHVIADPKERKAMILQQIETL 232
Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295
A+ +G D+DLL+E++ LVE+ +G F++++L LP E++ T+K +Q+ F +
Sbjct: 233 AAKLGGIADIDEDLLDEVVSLVEYPTALLGKFEEEFLSLPAEVLVTTMKEHQRYFPVYDK 292
Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355
+G L FI VSN + D I+ GN +V+ ARL DA F
Sbjct: 293 DGKLLPHFITVSNGNSKDP-QKIILGNEKVLRARLSDAEFF------------------- 332
Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVD 412
+ DL KPLD + RL+ VVF ++GT ++V RI ++ IAQ + AD V
Sbjct: 333 -YKTDLKKPLDDNLPRLE--TVVFQQELGTLKDKVDRISIIAGYIAQQLGADENMLEHVK 389
Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472
RA +LSKADL T +V EFPELQG +G++YA E+ + A+ E PR +++P++
Sbjct: 390 RAALLSKADLVTNMVYEFPELQGIMGEKYARHDGEDEAVAVAVNEQYLPRSAGDDLPSSL 449
Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531
+ V++ADKLDTL + + I + P+GSKDP+ALRRA LG++RII+E ++I L + + +
Sbjct: 450 VGSVVAMADKLDTLASIFGIGQIPTGSKDPFALRRAALGVLRIIVEKNLEIDLEELLTNF 509
Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577
++L FF R + L D I D+I+A+L + + L
Sbjct: 510 VLLQGDKLTNSNVLEDLEDFFLQRFRALLQDEGIDVDVIQAVLARRETDPADFDARAQAL 569
Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637
+ F K E + KR+ IL K N +S EI EK L+ + +
Sbjct: 570 SHFRDLPKAEALAAANKRVANILK---KGNPVLSSEIQANLFKEPKEKALFEAVLAIKMN 626
Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697
QES + Y + L + P++ FFD V+V DD E+R NRL+ L ++ + L V +
Sbjct: 627 AQESFESGDYETALEALAELRAPVDEFFDSVMVMADDIELRQNRLNFLWGLRQLFLEVAD 686
Query: 698 VQKIV 702
+ +
Sbjct: 687 ISALQ 691