HHsearch alignment for GI: 254781095 and conserved domain: TIGR03199
>TIGR03199 pucC xanthine dehydrogenase C subunit. This gene has been characterized in B. subtilis as the FAD binding-subunit of xanthine dehydrogenase (pucC), acting in conjunction with pucD, the molybdopterin-binding subunit and pucE, the FeS-binding subunit.
Probab=94.21 E-value=0.08 Score=31.79 Aligned_cols=138 Identities=15% Similarity=0.252 Sum_probs=76.2
Q ss_pred ECCHHHHHHHHHHHHCCCCEEEECCCCEEEEE--CCCE--ECCHHHHCC-CCCCCEEEECCCCCCCCCEEEHHHHHHH-H
Q ss_conf 68989999999985629989998475203660--4884--022022112-3443113302665123311221567777-8
Q gi|254781095|r 45 PQDIHDLKYFLTLLPSDIPITIVGLGSNILVR--DAGI--RGVVLRLSN-AGFSNIEVRNHCEMIVGARCSGKSLANS-A 118 (318)
Q Consensus 45 p~s~~el~~~l~~~~~~~p~~iiG~GSNil~~--D~~~--~G~vI~l~~-~~~~~i~~~~~~~i~v~AG~~~~~l~~~-~ 118 (318)
T Consensus 1 P~sl~Eal~ll~~~~-~--a~~laGGt~l~~~~~~~~~~~p~~lIdl~~I~eL~~I~~~~~-~l~IGA~vt~~~i~~~~~ 76 (264)
T TIGR03199 1 PAALDEAWSLLEKAP-D--STFVSGSTLLQLQWEKGTLPMKQHLVSLEGIDELKGISTSDT-HVSIGALTTLNECRKNPL 76 (264)
T ss_pred CCCHHHHHHHHHHCC-C--CEEEECCCHHHHHHHCCCCCCCCEEEECCCCCCCCCEEECCC-EEEEEECCCHHHHHHCHH
T ss_conf 999899999997599-9--979978750077673276578873897799800135897799-799952681999752978
Q ss_pred HHHHCCCHHCC---CCHH-----HHHHHHHCCCCCCCCCEEEEEEE-----EEEEECCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 87520120003---8725-----66324311573215831345666-----43441123210000123344310023224
Q gi|254781095|r 119 LRHGIGGFHFF---YGIP-----GSIGGAAYMNAGANNCETSQYVV-----EVHGIDRKGNQHVIPREQLKYQYRSSEIT 185 (318)
Q Consensus 119 ~~~gl~GlE~l---~gIP-----GTVGGAi~mNAGayG~ei~d~i~-----~V~~~d~~g~~~~l~~~e~~f~YR~S~~~ 185 (318)
T Consensus 77 i~~~~p~L~~a~~~ig~~qIRN~gTiGGnia~~~~-------D~~p~Llal~A~v~~~~~~~~~~p~~~---f~~~~~~~ 146 (264)
T TIGR03199 77 IKRALPCFVDAASAIAAPGVRNRATIGGNIASGIG-------DFIPALLVLGAELIVYQKELIRLPLGA---WLSEEDFK 146 (264)
T ss_pred HHHHCHHHHHHHHHHCCHHHEEEEEECCCCCCCCC-------CHHHHHHHCCCEEEEECCCCEEEEHHH---HHHHCCCC
T ss_conf 88777699999987488632311465451257875-------477999975998999469708965788---66440478
Q ss_pred CCCCEEEEECC
Q ss_conf 67620010023
Q gi|254781095|r 186 KDLIITHVVLR 196 (318)
Q Consensus 186 ~~~iIl~a~l~ 196 (318)
T Consensus 147 ~~eii~~i~i~ 157 (264)
T TIGR03199 147 PTAIVTRVIIG 157 (264)
T ss_pred CCCEEEEEEEE
T ss_conf 77579999981