HHSEARCH alignment of GI: 254781095 and SCOP domain: d1rm6b2

Alignment
>d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain {Thauera aromatica [TaxId: 59405]}
Probab=98.21  E-value=1.7e-06  Score=58.52  Aligned_cols=150  Identities=16%  Similarity=0.248  Sum_probs=97.0

Q ss_pred             EEEEECCHHHHHHHHHHHHCCCCEEEECCCCEEEE--ECC-CEECCHHHHCC-CCCCCEEEECCCCCCCCCEEEHHHHHH
Q ss_conf             99996898999999998562998999847520366--048-84022022112-344311330266512331122156777
Q gi|254781095|r   41 VMFQPQDIHDLKYFLTLLPSDIPITIVGLGSNILV--RDA-GIRGVVLRLSN-AGFSNIEVRNHCEMIVGARCSGKSLAN  116 (318)
Q Consensus        41 ~~~~p~s~~el~~~l~~~~~~~p~~iiG~GSNil~--~D~-~~~G~vI~l~~-~~~~~i~~~~~~~i~v~AG~~~~~l~~  116 (318)
                      -|+.|+|.+|+.+++.    +.+-.++++|+-++.  ..+ .-+..+|.+++ ..+..|+..++..++.||++.+.++..
T Consensus         8 ~y~~P~sl~EA~~ll~----~~~a~~lAGGTdL~~~~k~~~~~p~~lIdl~~I~eL~~I~~~~dg~l~IGA~vT~~~l~~   83 (216)
T d1rm6b2           8 RTHRPATLADAVNALA----AEATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEAIAE   83 (216)
T ss_dssp             EEECCSSHHHHHHHTT----STTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHHHHHH
T ss_pred             EEECCCCHHHHHHHHC----CCCCEEEECCCCHHHHHHCCCCCCCCEECHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHH
T ss_conf             5768999999999862----899969977754899984365686510356562655202234687079833235688665


Q ss_pred             H-HHHHHCCCHH---CCCCHH-----HHHHHHHCCCCCC---------------------------------CCCEEEEE
Q ss_conf             7-8875201200---038725-----6632431157321---------------------------------58313456
Q gi|254781095|r  117 S-ALRHGIGGFH---FFYGIP-----GSIGGAAYMNAGA---------------------------------NNCETSQY  154 (318)
Q Consensus       117 ~-~~~~gl~GlE---~l~gIP-----GTVGGAi~mNAGa---------------------------------yG~ei~d~  154 (318)
                      . .....+..|-   -..+=|     |||||.+++...|                                 +..-.+|.
T Consensus        84 ~~~l~~~~p~L~~a~~~~as~qIRN~aTiGGNl~~~s~~~~yr~~~~~r~~~~~c~~~~g~~~~~~~~~~~c~a~p~sD~  163 (216)
T d1rm6b2          84 HDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRCYATYHGDV  163 (216)
T ss_dssp             CHHHHHHSHHHHHHHHHSSCHHHHHHCBHHHHHTCCCBCTTTSSCHHHHHHTTCBTTBBCSCCSSSTTCSSCCCBCCCSH
T ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHCCEECCCCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHH
T ss_conf             33202256999999998779999687222411466777322057021268887322557863012126764103564106


Q ss_pred             E-------EEEEEECCCCCEEEECCCCCCC--CCCCCCCCCCCCEEEEEC
Q ss_conf             6-------6434411232100001233443--100232246762001002
Q gi|254781095|r  155 V-------VEVHGIDRKGNQHVIPREQLKY--QYRSSEITKDLIITHVVL  195 (318)
Q Consensus       155 i-------~~V~~~d~~g~~~~l~~~e~~f--~YR~S~~~~~~iIl~a~l  195 (318)
                      .       -.|++...+| .++++-+|+-.  +||.+.++.+.+|+++.+
T Consensus       164 ~p~LlAl~A~v~l~~~~G-~R~vpl~dF~~~~G~~~t~L~~~Eii~~I~i  212 (216)
T d1rm6b2         164 APALMVLDARAEIVGPAG-KRTVPVAQLFRESGAEHLTLEKGELLAAIEV  212 (216)
T ss_dssp             HHHHHHTTCEEEEEETTE-EEEEEGGGGBCSCTTSCBCCCTTCEEEEEEE
T ss_pred             HHHHHHHCCEEEEECCCC-EEEEEHHHHCCCCCCCCCCCCCCCEEEEEEE
T ss_conf             699987099999975995-3998989930152876534699856999991


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: FAD-binding/transporter-associated domain-like
superfamily: FAD-binding/transporter-associated domain-like
family: CO dehydrogenase flavoprotein N-terminal domain-like
domain: 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain
species: Thauera aromatica [TaxId: 59405]