HHSEARCH alignment of GI: 254781095 and SCOP domain: d1wvfa2

Alignment
>d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]}
Probab=99.66  E-value=1.9e-16  Score=121.34  Aligned_cols=194  Identities=12%  Similarity=0.113  Sum_probs=132.0

Q ss_pred             HHHHHHHHHHHHHHCC-EE-EECCCCCCCCC-----CCCCCEEEEEEEECCHHHHHHHHHHH-HCCCCEEEECCCCEEEE
Q ss_conf             7999999999875066-27-75488001522-----57661488999968989999999985-62998999847520366
Q gi|254781095|r    4 GRISRLLRERGKQLRG-KF-QENFPLKQITW-----FRTGGNAEVMFQPQDIHDLKYFLTLL-PSDIPITIVGLGSNILV   75 (318)
Q Consensus         4 ~~~~~~l~~~~~~~~g-~i-~~n~~L~~~tt-----~rvGG~A~~~~~p~s~~el~~~l~~~-~~~~p~~iiG~GSNil~   75 (318)
                      +++.+.+.++...+.. .+ ....++++|++     .+....+..++.|+|.+|+++++++| ++++|+.+.|+|+|...
T Consensus        10 ~~~~~~v~~l~~ivG~~~V~~~~~~~~~y~~d~~~~~~~~~~P~~Vv~P~s~eeV~~iv~~a~~~~~~i~~~g~G~s~~~   89 (236)
T d1wvfa2          10 GEFNKAVQKFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGY   89 (236)
T ss_dssp             HHHHHHHHHHHHHHCGGGEECSHHHHHHHHCCCSSSCGGGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTT
T ss_pred             HHHHHHHHHHHHHCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEECCCCCCCCCC
T ss_conf             99999999999972976399889999777276320135676888899569999999999998717941100234444321


Q ss_pred             EC---CCEECCHHHHCCCCCCCE-EEE-CCCCCCCCCEEEHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHC-CCCC----
Q ss_conf             04---884022022112344311-330-2665123311221567777887520120003872566324311-5732----
Q gi|254781095|r   76 RD---AGIRGVVLRLSNAGFSNI-EVR-NHCEMIVGARCSGKSLANSALRHGIGGFHFFYGIPGSIGGAAY-MNAG----  145 (318)
Q Consensus        76 ~D---~~~~G~vI~l~~~~~~~i-~~~-~~~~i~v~AG~~~~~l~~~~~~~gl~GlE~l~gIPGTVGGAi~-mNAG----  145 (318)
                      ..   ..-++++|.+++  ++.+ +++ ++..++|+||+.|.++.+++.++|+. +-...+.+.|+||.+. .|++    
T Consensus        90 g~~~~~~~~~ividl~~--mn~i~~id~~~~~v~v~aG~~~~~l~~~l~~~g~~-~~~~~~~~~~~gG~i~~~~~~G~~~  166 (236)
T d1wvfa2          90 GSAAPVQRGQVILDLKK--MNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLP-VMLSFSAPSAIAGPVGNTMDRGVGY  166 (236)
T ss_dssp             TTTSCSSTTCEEEECTT--CCCEEEEETTTTEEEECTTCCHHHHHHHHHHTTCS-EECCCCSSCTTCCHHHHHHTTCBCS
T ss_pred             CCCCCCCCEEEEEECCC--CCCHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             11235551489860110--22101210333101011344433257887642124-2112222232100110011122221


Q ss_pred             -CCCCEEEEEEEEEEEECCCCCEEEECCCCC----CCCCCCCCCC---------C-CCCEEEEECCCCCCC
Q ss_conf             -158313456664344112321000012334----4310023224---------6-762001002354565
Q gi|254781095|r  146 -ANNCETSQYVVEVHGIDRKGNQHVIPREQL----KYQYRSSEIT---------K-DLIITHVVLRGFPES  201 (318)
Q Consensus       146 -ayG~ei~d~i~~V~~~d~~g~~~~l~~~e~----~f~YR~S~~~---------~-~~iIl~a~l~l~~~~  201 (318)
                       .||. +.|+|.++++++++|++.+......    .|..+.....         . -.||++++|++.|.+
T Consensus       167 ~~yG~-~~d~v~~levVl~~G~iv~~~~~~~~~~~~~~~~~~~~G~~~~~l~SeGtlGIIt~~tlkl~P~P  236 (236)
T d1wvfa2         167 TPYGE-HFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKP  236 (236)
T ss_dssp             STTCB-GGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECC
T ss_pred             CCCCC-CCCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCC
T ss_conf             22333-33211006999289819980896678866788974686865123656462487899999987289


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: FAD-binding/transporter-associated domain-like
superfamily: FAD-binding/transporter-associated domain-like
family: FAD-linked oxidases, N-terminal domain
domain: Flavoprotein subunit of p-cresol methylhydroxylase
species: Pseudomonas putida [TaxId: 303]