HHsearch alignment for GI: 254781096 and conserved domain: COG0770

>COG0770 MurF UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane].
Probab=100.00  E-value=0  Score=377.25  Aligned_cols=334  Identities=26%  Similarity=0.418  Sum_probs=270.5

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC----CCCCCCCHHHCCCCC-CHH----HHCCCCC
Q ss_conf             8515870457840477888864034444305753573333310014----685420011023221-012----2118553
Q gi|254781096|r  107 RKSISVSGTHGKTTTTSLIAALLEQGKFDPTVINGGIINSYGTNAR----IGTSEWIVVEADESD-GTF----IRLPSDI  177 (474)
Q Consensus       107 ~~~IaVTGTnGKTTTt~ml~~il~~~g~~~~~~~G~~~~~~~~~~~----~~~~~~~V~E~~e~~-~s~----~~~~P~i  177 (474)
T Consensus       103 ~kvIaITGS~GKTTTKe~la~iL~~~~~-v~~t~gn~Nn~iGlPltll~~~~~~e~~VlEmG~~~~GeI~~l~~i~~P~i  181 (451)
T COG0770         103 AKVIAITGSNGKTTTKEMLAAILSTKGK-VHATPGNFNNEIGLPLTLLRLPADTEYAVLEMGMNHPGEIAELSEIARPDI  181 (451)
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHHCCE-EECCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCCCE
T ss_conf             9689995899707699999999863680-746787668654415689747776647999868997774788844058988


Q ss_pred             EEEEEEECCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCC
Q ss_conf             03422202201100025566664301333333222222234650134543200111233333332222022102112584
Q gi|254781096|r  178 VVVTNIDPEHLDYYGDFNAIRAAFYKFIDNIPFYGFAVVCMDHPEVRSLIARIQNRKIITYGRHPQADIRYSNIRKYSGR  257 (474)
Q Consensus       178 aVitNI~~DHld~~~s~e~y~~aK~~i~~~~~~~g~~vin~Dd~~~~~~~~~~~~~~v~~fg~~~~~d~~~~~i~~~~~~  257 (474)
T Consensus       182 avItnIg~aHle~fgs~e~Ia~aK~Ei~~~~~~~g~ai~n~d~~~~~~~~~~~~~~~v~~fg~~~~~d~~~~~i~~~~~~  261 (451)
T COG0770         182 AVITNIGEAHLEGFGSREGIAEAKAEILAGLRPEGIAILNADNPLLKNWAAKIGNAKVLSFGLNNGGDFRATNIHLDEEG  261 (451)
T ss_pred             EEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEECCCC
T ss_conf             99838059998742889999999999981568786799878617778777635787579976887775256778983885


Q ss_pred             CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEE-
Q ss_conf             2013555113444442000023567654333221121001232100000013343100001582211014786047630-
Q gi|254781096|r  258 SIFDVSVQGNVTKDLTVIKDLSLPLIGEHNISNACASIAVAYKLGLSSEDVKKGLASFSGIKRRFTLVGVWNDVHVFDD-  336 (474)
Q Consensus       258 ~~f~~~~~~~~~~~~~~~~~~~l~l~G~Hn~~NalaAia~a~~lgi~~e~i~~~L~~f~g~~~R~e~v~~~~gv~~idD-  336 (474)
T Consensus       262 ~~f~~~~~~~~~-------~~~l~~~G~hn~~NalaA~a~a~~lG~~~e~i~~~L~~~~~~~gR~~~~~~~~g~~iIdD~  334 (451)
T COG0770         262 SSFTLDIEGGEA-------EFELPLPGRHNVTNALAAAALALELGLDLEEIAAGLKELKPVKGRLEVILLANGKTLIDDS  334 (451)
T ss_pred             EEEEEEECCCEE-------EEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECC
T ss_conf             079998068337-------9994578476899999999999981999999999998637888663367648981899737


Q ss_pred             CCCCCCCCHHHHHHHHCCCCCCCEEEE-ECCCCHH-HHHHHHHHHHHHHH--CCEEEEECCCCCCCCCCCCCCHHHHHHH
Q ss_conf             244554302223331013443210333-0366314-78889999999861--8999990866677643238999999999
Q gi|254781096|r  337 YGHHPIEISSVLAAVRQICPRKIIAIH-QPHRYSR-LSTLFDQFSSCFGD--ADIVLISPVYSAGEKEIPGFSSPELVKN  412 (474)
Q Consensus       337 yahnP~~i~atl~al~~~~~~rii~i~-~p~~~sr-~~~~~~e~~~~l~~--ad~vil~~i~~~~e~~~~g~~~~~l~~~  412 (474)
T Consensus       335 YNAnp~sm~aai~~l~~~~~~~~i~VlGdM~ELG~~s~~~H~~v~~~~~~~~~d~v~~~-----------G~~~~~i~~~  403 (451)
T COG0770         335 YNANPDSMRAALDLLAALPGRKGIAVLGDMLELGEESEELHEEVGEYAVEAGIDLVFLV-----------GELSKAIAEA  403 (451)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHCCCHHHHHHHHHHHHHHCCCEEEEEE-----------CCCHHHHHHH
T ss_conf             88998999999999963766885799477666385489999999999985695099997-----------6206999986


Q ss_pred             HHHCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf             99638998999889899999999855898799994489988999999999874
Q gi|254781096|r  413 IKLQGHPQAYYMDSFDHLVSKILAIAEPGDFIIFFGAGNITQWAASLIGELEL  465 (474)
Q Consensus       413 i~~~~~~~~~~~~~~~eav~~~~~~~~~gDvVL~~GaG~~~~~~~~~~~~l~~  465 (474)
T Consensus       404 ~~----~~~~~f~~~~~l~~~l~~~l~~gd~vLvKgSr~~~l--e~vv~~l~~  450 (451)
T COG0770         404 LG----NKGIYFADKEELITSLKALLRKGDVVLVKGSRGMKL--EKVVDALLG  450 (451)
T ss_pred             CC----CCEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCH--HHHHHHHHC
T ss_conf             57----775860777999999998567787899973764657--999999831