HHsearch alignment for GI: 254781096 and conserved domain: PRK05808

Probab=96.02  E-value=0.043  Score=33.30  Aligned_cols=73  Identities=23%  Similarity=0.384  Sum_probs=47.3

Q ss_pred             HCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCHHH----------HHHHHCC-C----------EEEECCCHHHC
Q ss_conf             2760799946146087899999987986999607899889----------9999889-8----------89967997886
Q gi|254781096|r    6 GMGPIHFVGIGGIGMSGIAEVLHNTGHQVQGSDVILGPNV----------QRLHKQG-I----------KVSIGHKVENI   64 (474)
Q Consensus         6 ~~~~i~~iGigG~G~s~lA~~l~~~G~~V~g~D~~~~~~~----------~~L~~~g-i----------~i~~g~~~~~i   64 (474)
T Consensus         2 ~i~~VaViGaG~mG~-~IA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~   80 (282)
T PRK05808          2 SIQKIGVIGAGTMGN-GIAQVCAVAGYDVVMVDISDEAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGTTDLDDL   80 (282)
T ss_pred             CCCEEEEECCCHHHH-HHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH
T ss_conf             726899989788999-9999999579938999799899999999999999999970886426699999526366888896


Q ss_pred             CCCCEEEECCCCCCCCH
Q ss_conf             88989998889899998
Q gi|254781096|r   65 DNAEILVLSTAIDKDNV   81 (474)
Q Consensus        65 ~~~d~vV~spgi~~~~~   81 (474)
T Consensus        81 ~~aDlVi--Eav~E~l~   95 (282)
T PRK05808         81 KDADLVI--EAAVENMD   95 (282)
T ss_pred             CCCCEEE--ECCCCCHH
T ss_conf             7599999--87756345