HHsearch alignment for GI: 254781096 and conserved domain: PRK09590
>PRK09590 celB cellobiose phosphotransferase system IIB component; Reviewed.
Probab=93.19 E-value=0.18 Score=29.06 Aligned_cols=70 Identities=17% Similarity=0.254 Sum_probs=43.3
Q ss_pred CCEEEEEEECHHHHHH--HH----HHHHHCCCEEEEEECCCCHHHHHHHHCCCEEEECCCHHHC--CCCCEEEECCCCCC
Q ss_conf 7607999461460878--99----9999879869996078998899999889889967997886--88989998889899
Q gi|254781096|r 7 MGPIHFVGIGGIGMSG--IA----EVLHNTGHQVQGSDVILGPNVQRLHKQGIKVSIGHKVENI--DNAEILVLSTAIDK 78 (474)
Q Consensus 7 ~~~i~~iGigG~G~s~--lA----~~l~~~G~~V~g~D~~~~~~~~~L~~~gi~i~~g~~~~~i--~~~d~vV~spgi~~ 78 (474)
T Consensus 1 MkKILLv--CaaGMSTSmlv~km~~~A~~~G~dveI~Av~~~----------------e~~~~i~~~~yDv~LlgPQVr~ 62 (104)
T PRK09590 1 MAKALII--CAAGMSSSLMAKKTTEFLKGKGKDIEVDAISAT----------------EGGKAIAAAAFDLYLVSPQTKM 62 (104)
T ss_pred CCEEEEE--ECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHH----------------HHHHHHCCCCCCEEEECHHHHH
T ss_conf 9559999--689987999999999999976983699984888----------------9887632268878998876887
Q ss_pred CCHHH-HHHHHCCCCEE
Q ss_conf 99889-99997799499
Q gi|254781096|r 79 DNVEC-IAARERNIPII 94 (474)
Q Consensus 79 ~~~~l-~~a~~~gi~i~ 94 (474)
T Consensus 63 ~~~~~k~~a~~~giPv~ 79 (104)
T PRK09590 63 YFKQFEEAGSKAGKPVV 79 (104)
T ss_pred HHHHHHHHHHHCCCCEE
T ss_conf 89999999987299778