HHsearch alignment for GI: 254781096 and conserved domain: PRK11929
>PRK11929 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; Provisional.
Probab=100.00 E-value=0 Score=456.26 Aligned_cols=378 Identities=20% Similarity=0.283 Sum_probs=300.5
Q ss_pred CCHHHCCCCCEEEECCCCCCC-CHHHHHHHHCCCC-EEEHH-------------------HHHHHHH--------CCCCC
Q ss_conf 997886889899988898999-9889999977994-99538-------------------9988641--------16851
Q gi|254781096|r 59 HKVENIDNAEILVLSTAIDKD-NVECIAARERNIP-IIFRS-------------------EMLAGLM--------RCRKS 109 (474)
Q Consensus 59 ~~~~~i~~~d~vV~spgi~~~-~~~l~~a~~~gi~-i~~~~-------------------e~l~~~~--------~~~~~ 109 (474)
T Consensus 34 ~DSR~V~~G~lFvAl~G~~~DGh~fi~~Ai~~GA~aiv~e~~~~~~~~~~~~~i~V~d~r~al~~la~~fy~~ps~~l~v 113 (953)
T PRK11929 34 LDSREVAPGDVFVACRGGASDGRAFIDQALARGAAVVIYEAEGAPVAPAGCLALPVADLRKALGELADEWYGKPSQDLSV 113 (953)
T ss_pred CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCE
T ss_conf 66541799998999452877889999999986997999916644446789719997989999999999986496758878
Q ss_pred EEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCC------CCCC---------------CCCCCCCHHHCCCC--
Q ss_conf 587045784047788886403444430575357333331------0014---------------68542001102322--
Q gi|254781096|r 110 ISVSGTHGKTTTTSLIAALLEQGKFDPTVINGGIINSYG------TNAR---------------IGTSEWIVVEADES-- 166 (474)
Q Consensus 110 IaVTGTnGKTTTt~ml~~il~~~g~~~~~~~G~~~~~~~------~~~~---------------~~~~~~~V~E~~e~-- 166 (474)
T Consensus 114 igVTGTNGKTTt~~~i~~il~~~g~~~~-~iGTlg~~~~~~~~~~~~~TTP~~~~l~~~l~~~~~~g~~~~vmEvSSHgL 192 (953)
T PRK11929 114 VAVTGTNGKTSCAQWLAQMLTRLGKPCG-SIGTLGARLPDGQSLGGSLTTPDVITLHRLLARMRAAGADAVAMEASSHGL 192 (953)
T ss_pred EEEECCCCHHHHHHHHHHHHHHCCCCEE-EECCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHH
T ss_conf 9997999799999999999986799889-983245405876446789999489999999999997699799998330677
Q ss_pred -CCHHHHCCCCCEEEEEEECCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC-CCCC
Q ss_conf -10122118553034222022011000255666643013333332222222346501345432001112333333-3222
Q gi|254781096|r 167 -DGTFIRLPSDIVVVTNIDPEHLDYYGDFNAIRAAFYKFIDNIPFYGFAVVCMDHPEVRSLIARIQNRKIITYGR-HPQA 244 (474)
Q Consensus 167 -~~s~~~~~P~iaVitNI~~DHld~~~s~e~y~~aK~~i~~~~~~~g~~vin~Dd~~~~~~~~~~~~~~v~~fg~-~~~~ 244 (474)
T Consensus 193 ~q~Rv~gi~fdvaifTNls~DHLDyH~tme~Y~~aK~~LF~~l~~~~~aViN~Dd~~~~~l~~~~~~~~~~~~~~~~~~a 272 (953)
T PRK11929 193 EQGRLDGIRFAVAGFTNLTRDHLDYHGTMEDYEQAKAALFEQWPPLGAAVINADDPAGERLLASLPAALLTGYALQGSPA 272 (953)
T ss_pred HHHHHCCCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCC
T ss_conf 64342087878899947976786654899999999999998741086699979888899999871278589993367877
Q ss_pred CEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 20221021125842013555113444442000023567654333221121001232100000013343100001582211
Q gi|254781096|r 245 DIRYSNIRKYSGRSIFDVSVQGNVTKDLTVIKDLSLPLIGEHNISNACASIAVAYKLGLSSEDVKKGLASFSGIKRRFTL 324 (474)
Q Consensus 245 d~~~~~i~~~~~~~~f~~~~~~~~~~~~~~~~~~~l~l~G~Hn~~NalaAia~a~~lgi~~e~i~~~L~~f~g~~~R~e~ 324 (474)
T Consensus 273 d~~~~~i~~~~~g~~f~l~~~~~~~-------~~~~~L~G~fNv~N~laA~a~~~~~g~~~~~i~~~l~~~~~vpGRmE~ 345 (953)
T PRK11929 273 DVHAYDLQATAHGQVFTLALPDGEA-------QIVTGLLGRHNISNLLLVAGALSKLGWPLPQIARELAAVSPVDGRLER 345 (953)
T ss_pred CEEEEEEEECCCCCEEEEEECCCEE-------EEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEE
T ss_conf 4899999982898689999789279-------998068631249999999999998399999999988617998887599
Q ss_pred E---CCCCCEEEEEECCCCCCCCHHHHHHHHCCC--CCCCEEEEECCCCHHHHHHHHHHHHHH-HHCCEEEEECCCCCCC
Q ss_conf 0---147860476302445543022233310134--432103330366314788899999998-6189999908666776
Q gi|254781096|r 325 V---GVWNDVHVFDDYGHHPIEISSVLAAVRQIC--PRKIIAIHQPHRYSRLSTLFDQFSSCF-GDADIVLISPVYSAGE 398 (474)
Q Consensus 325 v---~~~~gv~~idDyahnP~~i~atl~al~~~~--~~rii~i~~p~~~sr~~~~~~e~~~~l-~~ad~vil~~i~~~~e 398 (474)
T Consensus 346 v~~~~~~~~~~viVDYAHTpdAl~~~L~~lr~~~~~~~rli~VfGcgG-dRD~~KRp~Mg~iA~~~aD~viiT~DNPR~E 424 (953)
T PRK11929 346 VGPTASAQGPLVVVDYAHTPDALARALTALRPVAEANGRLVCVFGCGG-NRDKGKRPEMGRIAAELADRVIVTSDNPRDE 424 (953)
T ss_pred EECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC-CCCCCHHHHHHHHHHHHCCEEEECCCCCCCC
T ss_conf 615666789669998678989999999999976146980999989878-7761034899999998499899868998999
Q ss_pred CCCCCCCHHHHHHHHHHCC--CCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf 4323899999999999638--9989998898999999998558987999944899
Q gi|254781096|r 399 KEIPGFSSPELVKNIKLQG--HPQAYYMDSFDHLVSKILAIAEPGDFIIFFGAGN 451 (474)
Q Consensus 399 ~~~~g~~~~~l~~~i~~~~--~~~~~~~~~~~eav~~~~~~~~~gDvVL~~GaG~ 451 (474)
T Consensus 425 dp------~~I~~dI~~g~~~~~~~~~i~dR~~AI~~ai~~a~~~D~vliaGKGh 473 (953)
T PRK11929 425 AP------EDIIDQILAGIPAGARALRQSDRALAIMQAIWMAKPGDVILLAGKGH 473 (953)
T ss_pred CH------HHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 99------99999998565668866997799999999998479999899987686