HHsearch alignment for GI: 254781096 and conserved domain: PRK12810
>PRK12810 gltD glutamate synthase subunit beta; Reviewed.
Probab=97.72 E-value=0.00094 Score=44.66 Aligned_cols=72 Identities=21% Similarity=0.291 Sum_probs=54.0
Q ss_pred HCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCC----------------CHH----HHHHHHCCCEEEECC------
Q ss_conf 276079994614608789999998798699960789----------------988----999998898899679------
Q gi|254781096|r 6 GMGPIHFVGIGGIGMSGIAEVLHNTGHQVQGSDVIL----------------GPN----VQRLHKQGIKVSIGH------ 59 (474)
Q Consensus 6 ~~~~i~~iGigG~G~s~lA~~l~~~G~~V~g~D~~~----------------~~~----~~~L~~~gi~i~~g~------ 59 (474)
T Consensus 142 ~gkkVAVIGsGPAGLsa-A~~Lar~G~~VtVfE~~~~~GGll~yGIP~~RLpk~v~~~ei~~l~~~GV~~~~n~~VG~di 220 (472)
T PRK12810 142 TGKKVAVVGSGPAGLAA-ADQLARAGHKVTVFERDDRIGGLLRYGIPDFKLEKDVIDRRIELMEGEGIEFRTGVEVGKDI 220 (472)
T ss_pred CCCEEEEECCCHHHHHH-HHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECEECCCCC
T ss_conf 89989998977899999-99998669758997257777754653178855535899999999985797899052318757
Q ss_pred CHHHC-CCCCEEEECCCCCC
Q ss_conf 97886-88989998889899
Q gi|254781096|r 60 KVENI-DNAEILVLSTAIDK 78 (474)
Q Consensus 60 ~~~~i-~~~d~vV~spgi~~ 78 (474)
T Consensus 221 t~~~L~~~yDAV~la~Ga~~ 240 (472)
T PRK12810 221 TAEQLLAEYDAVFLGGGAYK 240 (472)
T ss_pred CHHHHHCCCCEEEEECCCCC
T ss_conf 69998505798999037787