HHsearch alignment for GI: 254781096 and conserved domain: PRK12814

Probab=98.06  E-value=0.00011  Score=50.93  Aligned_cols=95  Identities=20%  Similarity=0.349  Sum_probs=69.6

Q ss_pred             CHHHCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCC---------------C-----HHHHHHHHCCCEEEECC---
Q ss_conf             531276079994614608789999998798699960789---------------9-----88999998898899679---
Q gi|254781096|r    3 NPQGMGPIHFVGIGGIGMSGIAEVLHNTGHQVQGSDVIL---------------G-----PNVQRLHKQGIKVSIGH---   59 (474)
Q Consensus         3 ~~~~~~~i~~iGigG~G~s~lA~~l~~~G~~V~g~D~~~---------------~-----~~~~~L~~~gi~i~~g~---   59 (474)
T Consensus       189 ~~~tGKkVAIIGaGPAGLsa-Ay~L~~~Gh~VTVfE~~~~~GGmlryGIP~yRLPk~vld~EI~~i~~~GV~~~~n~~vG  267 (652)
T PRK12814        189 APKSGKKVAIIGAGPAGLTA-AYYLLRKGHDVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFG  267 (652)
T ss_pred             CCCCCCEEEEECCCHHHHHH-HHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEC
T ss_conf             78889979996837899999-99999779906998158888986764486333899999999999997198588667947


Q ss_pred             ---CHHHC-CCCCEEEECCCCCCCCHHHHHHHHCCCC------EEEHHHHHHHHHC
Q ss_conf             ---97886-8898999888989999889999977994------9953899886411
Q gi|254781096|r   60 ---KVENI-DNAEILVLSTAIDKDNVECIAARERNIP------IIFRSEMLAGLMR  105 (474)
Q Consensus        60 ---~~~~i-~~~d~vV~spgi~~~~~~l~~a~~~gi~------i~~~~e~l~~~~~  105 (474)
T Consensus       268 ~ditl~~L~~~yDAVflaiGa~~~r-------~L~ipGedl~gV~~avdfL~~v~~  316 (652)
T PRK12814        268 RDITLEELQKEFDAVLLAVGAQKAS-------KMGIPGEELPGVISGIDFLRNVAL  316 (652)
T ss_pred             CCCCHHHHHHHCCEEEEEECCCCCC-------CCCCCCCCCCCEEEHHHHHHHHHC
T ss_conf             7477999986589999975578774-------479888878772768999998526