HHsearch alignment for GI: 254781096 and conserved domain: PRK12939

Probab=92.35  E-value=0.85  Score=24.49  Aligned_cols=81  Identities=19%  Similarity=0.211  Sum_probs=49.4

Q ss_pred             CCCHHHCCEEEEEEEC-HHHHHHHHHHHHHCCCEEEEEECCCC---HHHHHHHHCCCEEEE--C--CCH-----------
Q ss_conf             9853127607999461-46087899999987986999607899---889999988988996--7--997-----------
Q gi|254781096|r    1 MLNPQGMGPIHFVGIG-GIGMSGIAEVLHNTGHQVQGSDVILG---PNVQRLHKQGIKVSI--G--HKV-----------   61 (474)
Q Consensus         1 ~~~~~~~~~i~~iGig-G~G~s~lA~~l~~~G~~V~g~D~~~~---~~~~~L~~~gi~i~~--g--~~~-----------   61 (474)
T Consensus         1 M~~~L~~KvalVTGgs~GIG~-aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~~~~~~~~~~   79 (250)
T PRK12939          1 MASSLAGKRALVTGAARGLGA-AFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAA   79 (250)
T ss_pred             CCCCCCCCEEEEECCCCHHHH-HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf             999999987999583668999-9999999879999999698899999999999559909999924899999999999999


Q ss_pred             HHCCCCCEEEECCCCCCCCHH
Q ss_conf             886889899988898999988
Q gi|254781096|r   62 ENIDNAEILVLSTAIDKDNVE   82 (474)
Q Consensus        62 ~~i~~~d~vV~spgi~~~~~~   82 (474)
T Consensus        80 ~~~g~iDiLVNNAG~~~~~~~  100 (250)
T PRK12939         80 AALGGLDGLVNNAGITNSKSA  100 (250)
T ss_pred             HHCCCCCEEEECCCCCCCCCC
T ss_conf             974999799988778999990