HHsearch alignment for GI: 254781096 and conserved domain: TIGR01830
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase; InterPro: IPR011284 This entry represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis found in many plant and bacterial species. This enzyme is involved in type II fatty acid biosynthesis, where the individual metabolic transformations are carried out by different enzymes rather than by a single enzyme as occurs in type I fatty acid biosynthesis . Structural studies show that the enzyme is a tetramer which forms a typical Rossman fold , . Unlike other members of the short-chain dehydrogenase/reductase superfamily, the enzyme undergoes a marked conformational change upon binding of the NADP(H)cofactor. This conformational change aligns the side chains of the catalytic triad at the active site in an active conformation and increases the affinity of the enzyme for its substrate.; GO: 0004316 3-oxoacyl-[acyl-carrier-protein] reductase activity, 0051287 NAD binding, 0006633 fatty acid biosynthetic process.
Probab=96.31 E-value=0.023 Score=35.14 Aligned_cols=67 Identities=27% Similarity=0.327 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCHH----HHHHHHCCCEEEE---C-CC-----------HHHCCCCCEEEECCCC
Q ss_conf 14608789999998798699960789988----9999988988996---7-99-----------7886889899988898
Q gi|254781096|r 16 GGIGMSGIAEVLHNTGHQVQGSDVILGPN----VQRLHKQGIKVSI---G-HK-----------VENIDNAEILVLSTAI 76 (474)
Q Consensus 16 gG~G~s~lA~~l~~~G~~V~g~D~~~~~~----~~~L~~~gi~i~~---g-~~-----------~~~i~~~d~vV~spgi 76 (474)
T Consensus 8 RGIG~-AIA~~LA~~Ga~V~i~y~~~e~~~~~~~~e~~~~G~~a~~~~~dvs~~~~~~~~~~~~~~~~G-iDiLVNNAGI 85 (238)
T TIGR01830 8 RGIGR-AIALKLAKEGAKVIITYRTSEEGAEEVVEEIKELGVKAAGVVLDVSDREDVKALVEEAEEELG-IDILVNNAGI 85 (238)
T ss_pred CHHHH-HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-CEEEEECCCC
T ss_conf 61679-999999867995999659825788899999985697599996038888999999999999829-9089978741
Q ss_pred CCCCHHHH
Q ss_conf 99998899
Q gi|254781096|r 77 DKDNVECI 84 (474)
Q Consensus 77 ~~~~~~l~ 84 (474)
T Consensus 86 TrD~Ll~R 93 (238)
T TIGR01830 86 TRDNLLMR 93 (238)
T ss_pred CCCCHHCC
T ss_conf 34301004