HHsearch alignment for GI: 254781096 and conserved domain: cd05291
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=90.63 E-value=1.3 Score=23.30 Aligned_cols=70 Identities=21% Similarity=0.334 Sum_probs=47.8
Q ss_pred CEEEEEEECHHHHHHHHHHHHHCCC--EEEEEECCCCHHH---HHHHH------CCCEEEECCCHHHCCCCCEEEECCCC
Q ss_conf 6079994614608789999998798--6999607899889---99998------89889967997886889899988898
Q gi|254781096|r 8 GPIHFVGIGGIGMSGIAEVLHNTGH--QVQGSDVILGPNV---QRLHK------QGIKVSIGHKVENIDNAEILVLSTAI 76 (474)
Q Consensus 8 ~~i~~iGigG~G~s~lA~~l~~~G~--~V~g~D~~~~~~~---~~L~~------~gi~i~~g~~~~~i~~~d~vV~spgi 76 (474)
T Consensus 1 rKI~IIGaG~VG~~-~a~~l~~~~l~~el~L~Di~~~~a~G~a~DL~~~~~~~~~~~~i~~~-~~~~~~~aDvvVitAG~ 78 (306)
T cd05291 1 RKVVIIGAGHVGSS-FAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAG-DYSDCKDADIVVITAGA 78 (306)
T ss_pred CEEEEECCCHHHHH-HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEC-CHHHHCCCCEEEECCCC
T ss_conf 95999996988999-99999857998779998189870176999887013305997399608-87884789999990676
Q ss_pred CCC
Q ss_conf 999
Q gi|254781096|r 77 DKD 79 (474)
Q Consensus 77 ~~~ 79 (474)
T Consensus 79 ~rk 81 (306)
T cd05291 79 PQK 81 (306)
T ss_pred CCC
T ss_conf 679