RPSBLAST alignment for GI: 254781096 and conserved domain: TIGR01087
>gnl|CDD|162197 TIGR01087, murD, UDP-N-acetylmuramoylalanine--D-glutamate ligase. Length = 433
Score = 141 bits (357), Expect = 4e-34
Identities = 115/451 (25%), Positives = 188/451 (41%), Gaps = 62/451 (13%)
Query: 13 VGIGGIGMSGI--AEVLHNTGHQVQGSDVILGPNVQRLHKQ-----GIKVSIGHKVENID 65
+ I G+G +G A LH G +V +D+ ++ Q G + G +E+++
Sbjct: 2 ILILGLGKTGRAVARFLHKKGAEVTVTDLKPNEELEPSMGQLRLNEGSVLHTGLHLEDLN 61
Query: 66 NAEILVLSTAIDKDNVECIAARERNIPIIFRSEMLAGLMRCRKSISVSGTHGKTTTTSLI 125
NA+++V S I D+ AA +R IP++ E+ L+ ++++GT+GKTTTTSL+
Sbjct: 62 NADLVVKSPGIPPDHPLVQAAAKRGIPVVGDIELFLRLVP-LPVVAITGTNGKTTTTSLL 120
Query: 126 AALLEQGKFDPTVINGGIINSYGTNARIG----TSEWIVVEADESDGTFIRLPS---DIV 178
LL + + G I GT A +E V+E S S +I
Sbjct: 121 YHLL-KAAGLKAFLGGNI----GTPALEVLDQEGAELYVLEL--SSFQLETTESLRPEIA 173
Query: 179 VVTNIDPEHLDYYGDFNAIRAAFYKFIDNIPFYGFAVVCMDHPEVRSLIARIQNRKIITY 238
++ NI +HLD++G F AA K AV+ D P L + + + I
Sbjct: 174 LILNISEDHLDWHGSFEDYVAAKLKIFARQTEGDVAVLNADDPRFARLAQKSKAQVIWFS 233
Query: 239 GRHPQADIRYSNIRKYSGRSIFDVSVQGNVTKDLTVIKDLSLPLIGEHNISNACASIAVA 298
+ D + G + DL L+G HN N A+IA+A
Sbjct: 234 ---VEKDAERGLCIRDGGLYLKP--------------NDLEGSLLGLHNAENILAAIALA 276
Query: 299 YKLGLSSEDVKKGLASFSGIKRRFTLVGVWNDVHVFDDYGHHPIEISSVLAAVRQICPRK 358
LGL+ E + + L SF G+ R VG N VH ++D + + LAA+
Sbjct: 277 KSLGLNLEAILEALRSFKGLPHRLEYVGQKNGVHFYND--SKATNVHATLAALSAF-DNP 333
Query: 359 IIAIHQPHRYSRLSTLFDQ---FSSCFGDADIVLISPVYSAGEKEIPGFSSPELVKNIKL 415
+I I + D+ FS A + + V + GE + ++ +K
Sbjct: 334 VILI--------VGGD-DKGADFSPLAPAAAGKVKA-VLAIGE------DAAKIAPLLKE 377
Query: 416 QGHPQAYYMDSFDHLVSKILAIAEPGDFIIF 446
G Y ++S + V +A PGD ++
Sbjct: 378 AGLS-VYLVESLEEAVQAAREVASPGDVVLL 407