RPSBLAST alignment for GI: 254781096 and conserved domain: TIGR01087

>gnl|CDD|162197 TIGR01087, murD, UDP-N-acetylmuramoylalanine--D-glutamate ligase. Length = 433
 Score =  141 bits (357), Expect = 4e-34
 Identities = 115/451 (25%), Positives = 188/451 (41%), Gaps = 62/451 (13%)

Query: 13  VGIGGIGMSGI--AEVLHNTGHQVQGSDVILGPNVQRLHKQ-----GIKVSIGHKVENID 65
           + I G+G +G   A  LH  G +V  +D+     ++    Q     G  +  G  +E+++
Sbjct: 2   ILILGLGKTGRAVARFLHKKGAEVTVTDLKPNEELEPSMGQLRLNEGSVLHTGLHLEDLN 61

Query: 66  NAEILVLSTAIDKDNVECIAARERNIPIIFRSEMLAGLMRCRKSISVSGTHGKTTTTSLI 125
           NA+++V S  I  D+    AA +R IP++   E+   L+     ++++GT+GKTTTTSL+
Sbjct: 62  NADLVVKSPGIPPDHPLVQAAAKRGIPVVGDIELFLRLVP-LPVVAITGTNGKTTTTSLL 120

Query: 126 AALLEQGKFDPTVINGGIINSYGTNARIG----TSEWIVVEADESDGTFIRLPS---DIV 178
             LL +       + G I    GT A        +E  V+E   S        S   +I 
Sbjct: 121 YHLL-KAAGLKAFLGGNI----GTPALEVLDQEGAELYVLEL--SSFQLETTESLRPEIA 173

Query: 179 VVTNIDPEHLDYYGDFNAIRAAFYKFIDNIPFYGFAVVCMDHPEVRSLIARIQNRKIITY 238
           ++ NI  +HLD++G F    AA  K          AV+  D P    L  + + + I   
Sbjct: 174 LILNISEDHLDWHGSFEDYVAAKLKIFARQTEGDVAVLNADDPRFARLAQKSKAQVIWFS 233

Query: 239 GRHPQADIRYSNIRKYSGRSIFDVSVQGNVTKDLTVIKDLSLPLIGEHNISNACASIAVA 298
               + D       +  G  +                 DL   L+G HN  N  A+IA+A
Sbjct: 234 ---VEKDAERGLCIRDGGLYLKP--------------NDLEGSLLGLHNAENILAAIALA 276

Query: 299 YKLGLSSEDVKKGLASFSGIKRRFTLVGVWNDVHVFDDYGHHPIEISSVLAAVRQICPRK 358
             LGL+ E + + L SF G+  R   VG  N VH ++D       + + LAA+       
Sbjct: 277 KSLGLNLEAILEALRSFKGLPHRLEYVGQKNGVHFYND--SKATNVHATLAALSAF-DNP 333

Query: 359 IIAIHQPHRYSRLSTLFDQ---FSSCFGDADIVLISPVYSAGEKEIPGFSSPELVKNIKL 415
           +I I        +    D+   FS     A   + + V + GE       + ++   +K 
Sbjct: 334 VILI--------VGGD-DKGADFSPLAPAAAGKVKA-VLAIGE------DAAKIAPLLKE 377

Query: 416 QGHPQAYYMDSFDHLVSKILAIAEPGDFIIF 446
            G    Y ++S +  V     +A PGD ++ 
Sbjct: 378 AGLS-VYLVESLEEAVQAAREVASPGDVVLL 407