RPSBLAST alignment for GI: 254781096 and conserved domain: PRK03806
>gnl|CDD|179651 PRK03806, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 438
Score = 49.6 bits (119), Expect = 2e-06
Identities = 68/287 (23%), Positives = 122/287 (42%), Gaps = 55/287 (19%)
Query: 66 NAEILVLSTAIDKDNVECIAARERNIPIIFRSEMLAGLMRCRKS----ISVSGTHGKTTT 121
A+++V S I + AA + I I+ E+ CR++ ++++G++GK+T
Sbjct: 65 AADLIVASPGIALAHPSLSAAADAGIEIVGDIELF-----CREAQAPIVAITGSNGKSTV 119
Query: 122 TSLIAALLEQGKFDPTVINGGIINSYGTNARIG---------TSEWIVVEAD--ESDGTF 170
T+L+ + + G G N IG E V+E + + T
Sbjct: 120 TTLVGEMAKAA---------GWKVGVGGN--IGLPALSLLDQECELYVLELSSFQLETTS 168
Query: 171 IRLPSDIVVVTNIDPEHLD-YYGDFNAIRAAFYKFIDNIPFYGFAVVCMDHPEVRSLIAR 229
L + + N+ +H+D Y RAA + +N VV D ++ R
Sbjct: 169 -SLKAAAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKV---CVVNADDAL--TMPIR 222
Query: 230 IQNRKIITYGRHPQADIRYSNIRKYSGRSIFDVSVQGNVTKDLTVIKDLSLPLIGEHNIS 289
+++ +++G + D + + G + V K V+ + L G+HN +
Sbjct: 223 GADKRCVSFGVN-MGDYH---LNRQQGETWLRV-------KGEKVLNTKEMKLSGQHNYT 271
Query: 290 NACASIAVAYKLGLSSEDVKKGLASFSGIKRRFTLV----GV-W-ND 330
NA A++A+A +G+ K L +F+G+ RF LV GV W ND
Sbjct: 272 NALAALALADAVGIPRASSLKALTTFTGLPHRFQLVLEHNGVRWIND 318