254781097
N-acetylglucosaminyl transferase
| GeneID in NCBI database: | 8210122 | Locus tag: | CLIBASIA_04995 |
| Protein GI in NCBI database: | 254781097 | Protein Accession: | YP_003065510.1 |
| Gene range: | -(1095357, 1096466) | Protein Length: | 369aa |
| Gene description: | N-acetylglucosaminyl transferase | ||
| COG prediction: | [M] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase | ||
| KEGG prediction: | murG; N-acetylglucosaminyl transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] | ||
| SEED prediction: | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) | ||
| Pathway involved in KEGG: | Peptidoglycan biosynthesis [PATH:las00550] | ||
| Subsystem involved in SEED: | Peptidoglycan Biosynthesis | ||
| sequence | sequence profile | ||
Prediction of Local Sequence Properties
| Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
No hits with e-value below 0.05
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
| Identity | Alignment graph | Length | Definition | Round | E-value |
| Target | 369 | N-acetylglucosaminyl transferase [Candidatus Liberibact | |||
| 315122419 | 383 | N-acetylglucosaminyl transferase [Candidatus Liberibact | 1 | 1e-156 | |
| 15965929 | 374 | N-acetylglucosaminyl transferase [Sinorhizobium melilot | 1 | 7e-93 | |
| 110634357 | 375 | N-acetylglucosaminyl transferase [Mesorhizobium sp. BNC | 1 | 3e-91 | |
| 227822651 | 373 | undecaprenyldiphospho-muramoylpentapeptide beta-N- acet | 1 | 3e-91 | |
| 222149136 | 373 | undecaprenyldiphospho-muramoylpentapeptide beta-N- acet | 1 | 1e-89 | |
| 62290324 | 379 | undecaprenyldiphospho-muramoylpentapeptide beta-N- acet | 1 | 2e-89 | |
| 237815831 | 380 | undecaprenyldiphospho-muramoylpentapeptide beta-N-acety | 1 | 2e-89 | |
| 161619379 | 379 | N-acetylglucosaminyl transferase [Brucella canis ATCC 2 | 1 | 2e-89 | |
| 190892583 | 374 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) | 1 | 2e-89 | |
| 254694115 | 379 | undecaprenyldiphospho-muramoylpentapeptide beta-N- acet | 1 | 3e-89 |
| >gi|315122419|ref|YP_004062908.1| N-acetylglucosaminyl transferase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 383 | Back alignment and organism information |
|---|
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 262/362 (72%), Positives = 315/362 (87%)
Query: 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVS 60
+++ N ILLVAGGTGGHVFPAVALSHELK RGY VYL D RA+ F+ DF + IY + S
Sbjct: 8 LAKKNAILLVAGGTGGHVFPAVALSHELKKRGYPVYLAIDHRAQCFVEDFSPEEIYVVPS 67
Query: 61 SQVRFSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSM 120
SQ+R SNP V + SL+ LWK FI SLRLI+KLKP V+VGFGGYH++SP+LAG+IL+IPSM
Sbjct: 68 SQIRLSNPVVIFRSLMALWKGFIVSLRLIRKLKPKVIVGFGGYHTLSPMLAGIILQIPSM 127
Query: 121 VHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIKMKDIPYQSS 180
+HEQN +MG+ANRLLSWGV++IA GL+SS+K +L KII+TGNP+R++ IKM +IPYQ+S
Sbjct: 128 IHEQNAVMGRANRLLSWGVKVIAGGLLSSKKGLLSHKIIITGNPVRNAFIKMANIPYQAS 187
Query: 181 DLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDEL 240
+QPF LL+FGGSQGAKVFSDI+PKSIALIP+ QR+RL+I QQV+ED+KE VQK YD+L
Sbjct: 188 YSNQPFRLLIFGGSQGAKVFSDIIPKSIALIPKEQRQRLIITQQVKEDEKEIVQKIYDDL 247
Query: 241 GCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAY 300
G KA ++ FFKDIE+YI EANLLICRSGALTVSEIAVIGRP IL+PYPHS++QDQLHNA+
Sbjct: 248 GLKAHISSFFKDIEKYIFEANLLICRSGALTVSEIAVIGRPVILIPYPHSINQDQLHNAW 307
Query: 301 YLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEK 360
+LQEGGGAKVIT+NFLSPERLA E+ SAMK P LVQMAKQVSMKGK +AVL+LSDLVE+
Sbjct: 308 FLQEGGGAKVITQNFLSPERLANEISSAMKNPESLVQMAKQVSMKGKYKAVLLLSDLVEQ 367
Query: 361 LA 362
LA
Sbjct: 368 LA 369
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Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|15965929|ref|NP_386282.1| N-acetylglucosaminyl transferase [Sinorhizobium meliloti 1021] Length = 374 | Back alignment and organism information |
|---|
Score = 345 bits (885), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 234/360 (65%)
Query: 3 ENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQ 62
+ +ILL AGGTGGH+FPA AL+HELK GY+V+L+TD RA F FPAD I+ + S+
Sbjct: 2 DKGIILLAAGGTGGHLFPAEALAHELKATGYSVHLVTDSRAERFTGKFPADEIHVVPSAT 61
Query: 63 VRFSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVH 122
+ NP S+ LW A+ RLI +LKP VVGFGGY ++ PLLA + IPS++H
Sbjct: 62 IGSKNPVKLARSVWKLWTGLRAARRLIARLKPRAVVGFGGYPTVPPLLAATGMGIPSIIH 121
Query: 123 EQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDL 182
EQN +MG+AN++L+ V+ +A G + K + TGNP+R +++K +PY +
Sbjct: 122 EQNAVMGRANKMLASRVKAVAGGFLPEGTGAFAAKTVATGNPVRPAVLKAAGVPYAPAAG 181
Query: 183 DQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGC 242
D PFHL+VFGGSQGA+ FS VP+++ + + R+RL + QQ R +D+E V Y++LG
Sbjct: 182 DAPFHLVVFGGSQGAQFFSKAVPQAVCRLDDALRQRLKVTQQARPEDREGVIAVYEKLGV 241
Query: 243 KATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYL 302
A ++ FF D+ I A LLICRSGA TVSEI+VIGRPAILVPYP+++D DQ NA L
Sbjct: 242 PAEVSPFFTDMAGRIASAQLLICRSGASTVSEISVIGRPAILVPYPYALDHDQAANAAAL 301
Query: 303 QEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLA 362
GGA+VI + LS ERLA L AM P L QMA GKP A +L+ LVE +A
Sbjct: 302 AAKGGARVIAQVELSAERLAGILADAMSNPDALAQMAAGARQTGKPDAARLLALLVEAIA 361
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Species: Sinorhizobium meliloti Genus: Sinorhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|110634357|ref|YP_674565.1| N-acetylglucosaminyl transferase [Mesorhizobium sp. BNC1] Length = 375 | Back alignment and organism information |
|---|
Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/359 (47%), Positives = 229/359 (63%)
Query: 4 NNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQV 63
ILL AGGTGGH+FPA AL+HEL+ RG++V+L TD+RA F FPAD I+ I S+
Sbjct: 3 GRTILLSAGGTGGHLFPAEALAHELRARGWSVHLATDKRATRFAGTFPADEIHAIDSATF 62
Query: 64 RFSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHE 123
NP S + +W+ F S LI +LKP VVGFGGY ++ PL A ++P++VHE
Sbjct: 63 GSRNPLALLKSGLSIWRGFKQSTALINRLKPAAVVGFGGYPTLPPLYAATRRQVPTLVHE 122
Query: 124 QNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDLD 183
QN +MG+AN+ L+ V IA G + K ++TGNP+R ++I+ PY S
Sbjct: 123 QNAVMGRANKALAPRVTAIAGGFLPESDGPFASKTVLTGNPVRPAVIQASGTPYAPSSGR 182
Query: 184 QPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCK 243
F LLVFGGSQGA+ FS +VP+++ L+P R RL I+QQ R +D+ V+ YDELG K
Sbjct: 183 GVFRLLVFGGSQGAQYFSQVVPEAVRLLPATLRSRLRIVQQARPEDEGPVRSAYDELGVK 242
Query: 244 ATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQ 303
A ++ FF D+ I +A+L+I RSGA TVSEIAVIGRPAILVPYP+++D DQ NA L+
Sbjct: 243 AEVSPFFTDLASRIADAHLVISRSGASTVSEIAVIGRPAILVPYPYALDHDQAANATALE 302
Query: 304 EGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLA 362
GGA+++ + LS ERL L AM P L MA G+P A +L+D+ E +A
Sbjct: 303 RAGGAEIVPQEKLSAERLRGLLEVAMGAPDKLAAMAAAAKSVGRPDASRLLADVTEAIA 361
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Species: Chelativorans sp. BNC1 Genus: Chelativorans Family: Phyllobacteriaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|227822651|ref|YP_002826623.1| undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase [Sinorhizobium fredii NGR234] Length = 373 | Back alignment and organism information |
|---|
Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/360 (47%), Positives = 233/360 (64%), Gaps = 1/360 (0%)
Query: 3 ENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQ 62
+ +I L AGGTGGH+FPA AL+HELK GYAV+L+TD RA + FPA+ ++ + S+
Sbjct: 2 DKGIIFLAAGGTGGHLFPAEALAHELKASGYAVHLVTDSRAERYAGKFPAEEVHVVPSAT 61
Query: 63 VRFSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVH 122
+ NP S+ LW A+ RLI + KP VVGFGGY ++ PLLA + +PS++H
Sbjct: 62 IGSKNPIKLAQSVWKLWTGLRAARRLIARYKPRAVVGFGGYPTVPPLLAATGMGVPSLIH 121
Query: 123 EQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDL 182
EQN +MG+AN++L+ VQ IA G + K + TGNP+R ++ + +PY ++
Sbjct: 122 EQNAVMGRANKMLASRVQAIAGGFLPEGTGAFAAKTVTTGNPVRPAVSEAARVPY-AAPH 180
Query: 183 DQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGC 242
PFHL+VFGGSQGA+ FS VP++I + + QR+RL + QQ R +D+E V YD+LG
Sbjct: 181 GGPFHLVVFGGSQGAQFFSKAVPQAICRLDDAQRQRLKVTQQARPEDREGVTAAYDKLGI 240
Query: 243 KATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYL 302
A ++ FF D+ I A+L+ICRSGA TVSE++VIGRPAILVPYP+++D DQ NA L
Sbjct: 241 PAEVSPFFTDMAARIASAHLVICRSGASTVSEVSVIGRPAILVPYPYALDHDQAANAAAL 300
Query: 303 QEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLA 362
GGA+VI + L+ ERLA L AM P L QMA GKP A +L+ LVE +A
Sbjct: 301 AAKGGARVIAQAELNAERLAGILSDAMNTPDALAQMAANARETGKPDAARLLASLVEAIA 360
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Species: Sinorhizobium fredii Genus: Sinorhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|222149136|ref|YP_002550093.1| undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase [Agrobacterium vitis S4] Length = 373 | Back alignment and organism information |
|---|
Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/362 (44%), Positives = 238/362 (65%), Gaps = 1/362 (0%)
Query: 4 NNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQV 63
+ILL AGGTGGH+FPA AL+HEL+ RGY+V+L+TD RA + FPAD+I+ + S+ +
Sbjct: 3 KGLILLAAGGTGGHLFPAEALAHELRARGYSVHLVTDSRAERYAGKFPADAIHVVPSATI 62
Query: 64 RFSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHE 123
NP +L+ LW+ + A+ LI LKP VV+GFGGY +I PLLA L + +++HE
Sbjct: 63 GSKNPVAIAKALLTLWRGYRAARSLIAGLKPLVVIGFGGYPTIPPLLAARALGVATVIHE 122
Query: 124 QNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDLD 183
QN +MG+ANR L+ V+ IA G + + K +VTGNP+R +++ + YQ S
Sbjct: 123 QNAVMGRANRFLAPRVKAIAGGFLPA-GGAYADKTVVTGNPVRPAVLAASETDYQPSGDG 181
Query: 184 QPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCK 243
PF L+VFGGSQGA+ FS+ VP +I ++ ++ R RL I QQ R +D ++V+ Y++L
Sbjct: 182 DPFELVVFGGSQGAQHFSNAVPSAICILDDVLRARLRITQQARPEDADRVKALYEKLKVP 241
Query: 244 ATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQ 303
A+++ FF D+ I + ++I RSGA TVSE+ VIGRPA+LVPYP+++D DQ NA +
Sbjct: 242 ASVSPFFGDMAERIATSQMVISRSGASTVSELGVIGRPAVLVPYPYALDHDQAANAAAIS 301
Query: 304 EGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLAH 363
GGA V+ ++ L+PE+L+ L M P+ L QMA G+P+A +L+DLV+ +A
Sbjct: 302 GQGGAVVVPQSDLTPEKLSALLKDWMTSPAKLAQMAASARSAGQPEAAGLLADLVQTIAE 361
Query: 364 VK 365
K
Sbjct: 362 GK 363
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Species: Agrobacterium vitis Genus: Agrobacterium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|62290324|ref|YP_222117.1| undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase [Brucella abortus bv. 1 str. 9-941] Length = 379 | Back alignment and organism information |
|---|
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/366 (45%), Positives = 238/366 (65%)
Query: 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVS 60
++ VI+L AGGTGGH+FPA AL+HEL+ RG+ V+L TD RA+ F+ F D ++ I S
Sbjct: 4 LANQGVIVLAAGGTGGHLFPAEALAHELRARGWDVHLATDARAQRFVGAFAQDHVHVIRS 63
Query: 61 SQVRFSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSM 120
+ + NP + LW+ + S +L ++LKP +VVGFGGY ++ PL A + IP++
Sbjct: 64 ATIAGRNPVALLKTFWSLWQGNLDSRKLFRRLKPKLVVGFGGYPTLPPLYAASNMGIPTL 123
Query: 121 VHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIKMKDIPYQSS 180
+HEQN +MG+AN+ L+ V+ IA G + K ++TGNP+RS ++ PY +
Sbjct: 124 IHEQNAVMGRANKGLAGRVKAIAGGFLPENSGAYAAKTVITGNPVRSPVLVAAATPYTPA 183
Query: 181 DLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDEL 240
D F LLVFGGSQGA+ FS +P ++AL+PE +R RL+I QQ R++D+ ++ Y++L
Sbjct: 184 GKDDRFRLLVFGGSQGAQFFSQAIPAAVALLPEHERARLLITQQARKEDEASARQAYEKL 243
Query: 241 GCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAY 300
G A +A FF D+ + +A+ +I RSGA TVSEI VIGRPA+LVP+PH++D DQ NA
Sbjct: 244 GVPADVAPFFNDMPARMADAHFVIARSGASTVSEITVIGRPAMLVPFPHALDHDQAANAA 303
Query: 301 YLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEK 360
L GGA+V+ + LSP+RLAE L SAM +P L Q AK GKP A +L+DL E
Sbjct: 304 ALAAAGGAEVVRQADLSPQRLAEMLQSAMNEPERLEQQAKAAKSVGKPDAARLLADLAEA 363
Query: 361 LAHVKV 366
+A K
Sbjct: 364 IASGKT 369
|
Species: Brucella abortus Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|237815831|ref|ZP_04594828.1| undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase [Brucella abortus str. 2308 A] Length = 380 | Back alignment and organism information |
|---|
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/366 (45%), Positives = 238/366 (65%)
Query: 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVS 60
++ VI+L AGGTGGH+FPA AL+HEL+ RG+ V+L TD RA+ F+ F D ++ I S
Sbjct: 5 LANQGVIVLAAGGTGGHLFPAEALAHELRARGWDVHLATDARAQRFVGAFAQDHVHVIRS 64
Query: 61 SQVRFSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSM 120
+ + NP + LW+ + S +L ++LKP +VVGFGGY ++ PL A + IP++
Sbjct: 65 ATIAGRNPVALLKTFWSLWQGNLDSRKLFRRLKPKLVVGFGGYPTLPPLYAASNMGIPTL 124
Query: 121 VHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIKMKDIPYQSS 180
+HEQN +MG+AN+ L+ V+ IA G + K ++TGNP+RS ++ PY +
Sbjct: 125 IHEQNAVMGRANKGLAGRVKAIAGGFLPENSGAYAAKTVITGNPVRSPVLVAAATPYTPA 184
Query: 181 DLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDEL 240
D F LLVFGGSQGA+ FS +P ++AL+PE +R RL+I QQ R++D+ ++ Y++L
Sbjct: 185 GKDDRFRLLVFGGSQGAQFFSQAIPAAVALLPEHERARLLITQQARKEDEASARQAYEKL 244
Query: 241 GCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAY 300
G A +A FF D+ + +A+ +I RSGA TVSEI VIGRPA+LVP+PH++D DQ NA
Sbjct: 245 GVPADVAPFFNDMPARMADAHFVIARSGASTVSEITVIGRPAMLVPFPHALDHDQAANAA 304
Query: 301 YLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEK 360
L GGA+V+ + LSP+RLAE L SAM +P L Q AK GKP A +L+DL E
Sbjct: 305 ALAAAGGAEVVRQADLSPQRLAEMLQSAMNEPERLEQQAKAAKSVGKPDAARLLADLAEA 364
Query: 361 LAHVKV 366
+A K
Sbjct: 365 IASGKT 370
|
Species: Brucella abortus Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|161619379|ref|YP_001593266.1| N-acetylglucosaminyl transferase [Brucella canis ATCC 23365] Length = 379 | Back alignment and organism information |
|---|
Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/366 (45%), Positives = 237/366 (64%)
Query: 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVS 60
++ VI+L AGGTGGH+FPA AL+HEL+ RG+ V+L TD RA+ F+ F D ++ I S
Sbjct: 4 LANQGVIVLAAGGTGGHLFPAEALAHELRARGWDVHLATDARAQRFVGAFAQDHVHVIRS 63
Query: 61 SQVRFSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSM 120
+ + NP + LW+ + S +L ++LKP +VVGFGGY ++ PL A + IP++
Sbjct: 64 ATIAGRNPVALLKTFWSLWQGNLDSRKLFRRLKPKLVVGFGGYPTLPPLYAASNMGIPTL 123
Query: 121 VHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIKMKDIPYQSS 180
+HEQN +MG+AN+ L+ V+ IA G + K ++TGNP+R ++ PY +
Sbjct: 124 IHEQNAVMGRANKGLAGRVKAIAGGFLPENSGAYAAKTVITGNPVRPPVLVAAATPYTPA 183
Query: 181 DLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDEL 240
D F LLVFGGSQGA+ FS +P ++AL+PE +R RL+I QQ R++D+ +K Y++L
Sbjct: 184 GKDDRFRLLVFGGSQGAQFFSQAIPAAVALLPEHERARLLITQQARKEDEASARKAYEKL 243
Query: 241 GCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAY 300
G A +A FF D+ + +A+ +I RSGA TVSEI VIGRPA+LVP+PH++D DQ NA
Sbjct: 244 GVPADVAPFFNDMPARMADAHFVIARSGASTVSEITVIGRPAMLVPFPHALDHDQAANAA 303
Query: 301 YLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEK 360
L GGA+V+ + LSP+RLAE L SAM +P L Q AK GKP A +L+DL E
Sbjct: 304 ALAAAGGAEVVRQADLSPQRLAEMLQSAMNEPERLEQQAKAAKSVGKPDAARLLADLAEA 363
Query: 361 LAHVKV 366
+A K
Sbjct: 364 IASGKT 369
|
Species: Brucella canis Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|190892583|ref|YP_001979125.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosaminetransferase [Rhizobium etli CIAT 652] Length = 374 | Back alignment and organism information |
|---|
Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/363 (47%), Positives = 236/363 (65%)
Query: 4 NNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQV 63
++LL AGGTGGHVFPA AL+ +LK RGY+V+L+TD RA F FPA+ I+ + S+ +
Sbjct: 3 KGIVLLAAGGTGGHVFPAEALAFKLKERGYSVHLVTDSRAERFAGKFPAEEIHVVPSATI 62
Query: 64 RFSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHE 123
NP SL LW A+ +LI++LKP +VVGFGGY ++ PLLA L I SM+HE
Sbjct: 63 GSKNPVAVARSLWTLWSGMRAAKKLIQRLKPVIVVGFGGYPTVPPLLAATRLGIASMLHE 122
Query: 124 QNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDLD 183
QN +MG+AN+ L+ V+ IA G + V K + TGNP+R +++ + PY S
Sbjct: 123 QNAVMGRANKALAPRVKAIAGGFLQESGDVFSDKTVATGNPVRPAILAAAEQPYHPSHPG 182
Query: 184 QPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCK 243
+PF+L+VFGGSQGA+ FS +P +I+L+ + R RL + QQVR +D E V+ +L
Sbjct: 183 EPFNLVVFGGSQGAQYFSKAMPTAISLLDDELRARLRVTQQVRPEDMEMVRGCVAQLQMG 242
Query: 244 ATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQ 303
A +A FF D+ + +A+L+ICRSGA TVSEI+VIGRPA+LVPYPH++D DQ NA L
Sbjct: 243 ADIAPFFNDMAERLAKAHLVICRSGASTVSEISVIGRPAVLVPYPHALDHDQAANAAALA 302
Query: 304 EGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLAH 363
GGAKVI ++ LSPER+A L M P L MA + GKP A +L+D+VE +A
Sbjct: 303 ATGGAKVIVQSELSPERIASILSHVMNDPEKLSHMAAAAKLAGKPDAANLLADMVEAIAA 362
Query: 364 VKV 366
K
Sbjct: 363 GKT 365
|
Species: Rhizobium etli Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|254694115|ref|ZP_05155943.1| undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase [Brucella abortus bv. 3 str. Tulya] Length = 379 | Back alignment and organism information |
|---|
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/366 (45%), Positives = 237/366 (64%)
Query: 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVS 60
++ VI+L AGGTGGH+FPA AL+HEL+ RG+ V+L TD RA+ F+ F D ++ I S
Sbjct: 4 LANQGVIVLAAGGTGGHLFPAEALAHELRARGWDVHLATDARAQRFVGAFAQDHVHVIRS 63
Query: 61 SQVRFSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSM 120
+ + NP + LW+ + S L ++LKP +VVGFGGY ++ PL A + IP++
Sbjct: 64 ATIAGRNPVALLKTFWSLWQGNLDSRNLFRRLKPKLVVGFGGYPTLPPLYAASNMGIPTL 123
Query: 121 VHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIKMKDIPYQSS 180
+HEQN +MG+AN+ L+ V+ IA G + K ++TGNP+RS ++ PY +
Sbjct: 124 IHEQNAVMGRANKGLAGRVKAIAGGFLPENSGAYAAKTVITGNPVRSPVLVAAATPYTPA 183
Query: 181 DLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDEL 240
D F LLVFGGSQGA+ FS +P ++AL+PE +R RL+I QQ R++D+ ++ Y++L
Sbjct: 184 GKDDRFRLLVFGGSQGAQFFSQAIPAAVALLPEHERARLLITQQARKEDEASARQAYEKL 243
Query: 241 GCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAY 300
G A +A FF D+ + +A+ +I RSGA TVSEI VIGRPA+LVP+PH++D DQ NA
Sbjct: 244 GVPADVAPFFNDMPARMADAHFVIARSGASTVSEITVIGRPAMLVPFPHALDHDQAANAA 303
Query: 301 YLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEK 360
L GGA+V+ + LSP+RLAE L SAM +P L Q AK GKP A +L+DL E
Sbjct: 304 ALAAAGGAEVVRQADLSPQRLAEMLQSAMNEPERLEQQAKAAKSVGKPDAARLLADLAEA 363
Query: 361 LAHVKV 366
+A K
Sbjct: 364 IASGKT 369
|
Species: Brucella abortus Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
| Identity | Alignment graph | Length | Definition | E-value |
| Target | 369 | N-acetylglucosaminyl transferase [Candidatus Liberibact | ||
| PRK00726 | 357 | PRK00726, murG, undecaprenyldiphospho-muramoylpentapept | 4e-93 | |
| COG0707 | 357 | COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acetylgluc | 1e-76 | |
| TIGR01133 | 348 | TIGR01133, murG, undecaprenyldiphospho-muramoylpentapep | 2e-72 | |
| COG1819 | 406 | COG1819, COG1819, Glycosyl transferases, related to UDP | 2e-11 | |
| cd03785 | 350 | cd03785, GT1_MurG, MurG is an N-acetylglucosaminyltrans | 2e-94 | |
| pfam04101 | 167 | pfam04101, Glyco_tran_28_C, Glycosyltransferase family | 8e-25 | |
| COG4671 | 400 | COG4671, COG4671, Predicted glycosyl transferase [Gener | 4e-09 | |
| pfam03033 | 136 | pfam03033, Glyco_transf_28, Glycosyltransferase family | 1e-23 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closely rel | 8e-04 | |
| PRK12446 | 352 | PRK12446, PRK12446, undecaprenyldiphospho-muramoylpenta | 8e-21 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closely rel | 1e-05 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closely rel | 3e-05 | |
| cd03784 | 401 | cd03784, GT1_Gtf_like, This family includes the Gtfs, a | 2e-05 | |
| PLN02605 | 382 | PLN02605, PLN02605, monogalactosyldiacylglycerol syntha | 0.004 |
| >gnl|CDD|179100 PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 337 bits (866), Expect = 4e-93
Identities = 142/366 (38%), Positives = 207/366 (56%), Gaps = 22/366 (6%)
Query: 7 ILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRR---ARSFITDFPADSI--YEIVSS 61
ILL GGTGGHVFPA+AL+ ELK RG+ V + R AR P I + I S
Sbjct: 4 ILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTARGMEARLV----PKAGIEFHFIPSG 59
Query: 62 QVR----FSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRI 117
+R +N + L K + + +++K+ KP+VVVGFGGY S LA +L I
Sbjct: 60 GLRRKGSLANLKAPFK----LLKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGI 115
Query: 118 PSMVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIKMKDIPY 177
P ++HEQN + G AN+LL+ + +A + + K +VTGNP+R ++ + P
Sbjct: 116 PLVIHEQNAVPGLANKLLARFAKKVATAFPGAFPEFFKPKAVVTGNPVREEILALAAPPA 175
Query: 178 QSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQY 237
+ + + LLV GGSQGA+V ++ VP+++AL+PE L ++ Q + D E+V+ Y
Sbjct: 176 RLAGREGKPTLLVVGGSQGARVLNEAVPEALALLPE----ALQVIHQTGKGDLEEVRAAY 231
Query: 238 DELGCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLH 297
G A + F D+ A+L+ICR+GA TV+E+A G PAILVP PH+ D Q
Sbjct: 232 -AAGINAEVVPFIDDMAAAYAAADLVICRAGASTVAELAAAGLPAILVPLPHAADDHQTA 290
Query: 298 NAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDL 357
NA L + G A +I ++ L+PE+LAE+L + P L MA+ GKP A L+DL
Sbjct: 291 NARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARALGKPDAAERLADL 350
Query: 358 VEKLAH 363
+E+LA
Sbjct: 351 IEELAR 356
|
Length = 357 |
| >gnl|CDD|31051 COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 282 bits (722), Expect = 1e-76
Identities = 126/358 (35%), Positives = 199/358 (55%), Gaps = 7/358 (1%)
Query: 7 ILLVAGGTGGHVFPAVALSHELKNRGYAVYLI--TDRRARSFITDFPADSIYEIVSSQVR 64
I+L AGGTGGHVFPA+AL+ EL RG+ ++ T +F+ I S +R
Sbjct: 3 IVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVKQYGIEFELIPSGGLR 62
Query: 65 FSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQ 124
+ L K + + +++KKLKP+VV+G GGY S +A +L IP ++HEQ
Sbjct: 63 RKGSLKLLKAPFKLLKGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQ 122
Query: 125 NVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQ 184
N + G AN++LS + +A + V ++VTG P+R ++ +
Sbjct: 123 NAVPGLANKILSKFAKKVASAFPKLEAGVKPENVVVTGIPVRPEFEELPAAEVRKDGRLD 182
Query: 185 PFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCKA 244
+LV GGSQGAK +D+VP+++A + R+ ++ Q ++D E+++ Y+ELG
Sbjct: 183 KKTILVTGGSQGAKALNDLVPEALAKLAN----RIQVIHQTGKNDLEELKSAYNELG-VV 237
Query: 245 TLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQE 304
+ F D+ + A+L+I R+GALT++E+ +G PAILVPYP D Q +NA +L++
Sbjct: 238 RVLPFIDDMAALLAAADLVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEK 297
Query: 305 GGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLA 362
G A VI ++ L+PE+LAE + + P L MA+ GKP A ++DL+ LA
Sbjct: 298 AGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAERIADLLLALA 355
|
Length = 357 |
| >gnl|CDD|162217 TIGR01133, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Score = 268 bits (687), Expect = 2e-72
Identities = 126/357 (35%), Positives = 194/357 (54%), Gaps = 16/357 (4%)
Query: 7 ILLVAGGTGGHVFPAVALSHELKNRGYAVYLI-TDRRARSFITDFPADSIYEIVSSQVRF 65
++L AGGTGGH+FPA+A++ EL RG V + T R + Y I +R
Sbjct: 3 VVLAAGGTGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKRLVPKAGIEFYFIPVGGLRR 62
Query: 66 SNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQN 125
F + + L KA + R++KK KP+ V+GFGGY S LA +L IP HEQN
Sbjct: 63 KGSFRLIKTPLKLLKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQN 122
Query: 126 VIMGKANRLLSWGVQIIARGLVSSQKKVL-LRKIIVTGNPIRSSLIKMKDIPYQSSDL-- 182
+ G N+LLS A+ ++ S + ++ GNP+R + + P
Sbjct: 123 AVPGLTNKLLSR----FAKKVLISFPGAKDHFEAVLVGNPVRQEIRSL---PVPRERFGL 175
Query: 183 -DQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELG 241
+ +LV GGSQGAK+ +++VPK++A + E K + I+ Q ++D EKV+ Y ELG
Sbjct: 176 REGKPTILVLGGSQGAKILNELVPKALAKLAE---KGIQIVHQTGKNDLEKVKNVYQELG 232
Query: 242 CKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYY 301
+A + +++ A+L+I R+GA TV+E+A G PAIL+PYP++ D DQ +NA +
Sbjct: 233 IEAIVTFIDENMAAAYAAADLVISRAGASTVAELAAAGVPAILIPYPYAAD-DQYYNAKF 291
Query: 302 LQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLV 358
L++ G VI + L PE+L E L + P+ L MA+ KP A +++L+
Sbjct: 292 LEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAKRIAELI 348
|
RL J Bacteriol 1993 Mar;175(6):1841-3. Length = 348 |
| >gnl|CDD|32004 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 65.5 bits (159), Expect = 2e-11
Identities = 71/383 (18%), Positives = 126/383 (32%), Gaps = 72/383 (18%)
Query: 7 ILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFIT----DFPADSIYEIVSSQ 62
IL V G GHV P +AL EL+ RG+ V + + + F+ F A I + +
Sbjct: 4 ILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAAGLAFVAYPIRDSELAT 63
Query: 63 VRFSNPFV--FWNSLVILWKAFIASLRLIKKLKPNVVVG-----------------FGGY 103
V F L K L L+++L+P++VV G
Sbjct: 64 EDGKFAGVKSFRRLLQQFKKLIRELLELLRELEPDLVVDDARLSLGLAARLLGIPVVGIN 123
Query: 104 HSISPLLAGMILRIP----------SMVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKV 153
+ L L +P + ++ SW +++ R + + +
Sbjct: 124 VAPYTPLPAAGLPLPPVGIAGKLPIPLYPLPPRLVRPLIFARSWLPKLVVRRNLGLELGL 183
Query: 154 L-LRKIIVTGNPIR-----SSLIKMKDIPYQSS-----------------DLDQPFHLLV 190
+R++ +G + +P+ D+P +
Sbjct: 184 PNIRRLFASGPLLEIAYTDVLFPPGDRLPFIGPYIGPLLGEAANELPYWIPADRPIVYVS 243
Query: 191 FGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCKATLACFF 250
G A IV +++A + VI+ D + +A +
Sbjct: 244 LGTVGNAVELLAIVLEALADLDV-----RVIVSLGGARDTLV------NVPDNVIVADYV 292
Query: 251 KDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKV 310
+ A+ +I GA T SE G P +++P DQ NA ++E G
Sbjct: 293 P-QLELLPRADAVIHHGGAGTTSEALYAGVPLVVIPDGA----DQPLNAERVEELGAGIA 347
Query: 311 ITENFLSPERLAEELCSAMKKPS 333
+ L+ ERL + + S
Sbjct: 348 LPFEELTEERLRAAVNEVLADDS 370
|
Length = 406 |
| >gnl|CDD|99961 cd03785, GT1_MurG, MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Score = 341 bits (878), Expect = 2e-94
Identities = 129/352 (36%), Positives = 191/352 (54%), Gaps = 4/352 (1%)
Query: 7 ILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPAD-SIYEIVSSQVRF 65
IL+ GGTGGH+FPA+AL+ EL+ RG V + +R A ++ I +R
Sbjct: 2 ILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLEARLVPKAGIPLHTIPVGGLRR 61
Query: 66 SNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQN 125
+ L K + + +++KK KP+VVVGFGGY S LA +L IP ++HEQN
Sbjct: 62 KGSLKKLKAPFKLLKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQN 121
Query: 126 VIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQP 185
+ G ANRLL+ +A + K K +VTGNP+R ++ + +
Sbjct: 122 AVPGLANRLLARFADRVALSFPETAKYFPKDKAVVTGNPVREEILALDRERARLGLRPGK 181
Query: 186 FHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCKAT 245
LLVFGGSQGA+ ++ VP+ + E+ RKRL ++ Q + D E+V+K Y+ELG
Sbjct: 182 PTLLVFGGSQGARAINEAVPE---ALAELLRKRLQVIHQTGKGDLEEVKKAYEELGVNYE 238
Query: 246 LACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEG 305
+ F D+ A+L+I R+GA TV+E+A +G PAIL+P P++ D Q NA L +
Sbjct: 239 VFPFIDDMAAAYAAADLVISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKA 298
Query: 306 GGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDL 357
G A +I + L+PERLA L + P L MA+ +P A ++DL
Sbjct: 299 GAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDAAERIADL 350
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.. Length = 350 |
| >gnl|CDD|146634 pfam04101, Glyco_tran_28_C, Glycosyltransferase family 28 C-terminal domain | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 8e-25
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Query: 187 HLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCKATL 246
+ V GGSQGA+ + +V + L+ + ++ Q + D E V +Y + G +
Sbjct: 1 TIFVTGGSQGAQALNRLVLEVDPLLEL-KGIEYQVLHQTGKSDYEPVNCKYSKFGINVEV 59
Query: 247 ACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGG 306
F ++ YI A+L+I R+GA T++E+ +G+PAILVP P + + Q +NA L + G
Sbjct: 60 FPFIDNMAEYIKAADLVISRAGAGTIAELLALGKPAILVPRPKAAGEHQDNNALELVKAG 119
Query: 307 GAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAV 351
A V+ + L+PE+L E L + KP L +M K A+
Sbjct: 120 AALVLLQKELTPEKLVEALLKLLLKPLRLYEMNKAAKGSRLKDAI 164
|
The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site. Length = 167 |
| >gnl|CDD|34289 COG4671, COG4671, Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Score = 58.0 bits (140), Expect = 4e-09
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 17/172 (9%)
Query: 192 GGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCKA------T 245
GG+ GA++ + + L+ + K L++ + Q +L A +
Sbjct: 228 GGADGAELIETAL-AAAQLLAGLNHKWLIVT------GPFMPEAQRQKLLASAPKRPHIS 280
Query: 246 LACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEG 305
+ F D E + A L++ G TV EI G+PA++VP ++QL A L+E
Sbjct: 281 IFEFRNDFESLLAGARLVVSMGGYNTVCEILSFGKPALIVPRAAP-REEQLIRAQRLEEL 339
Query: 306 GGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDL 357
G V+ L+P+ LA+ L +A+ +PS + ++G +L++L
Sbjct: 340 GLVDVLLPENLTPQNLADALKAALARPS---PSKPHLDLEGLEHIARILAEL 388
|
Length = 400 |
| >gnl|CDD|145923 pfam03033, Glyco_transf_28, Glycosyltransferase family 28 N-terminal domain | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 1e-23
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
Query: 7 ILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFS 66
+LL GGT GHVFPAVAL+ L+ RG+ V L T F+ + + +
Sbjct: 1 VLLAGGGTRGHVFPAVALAWALRRRGHEVRLGTPPGLEEFVEEAGLP--FVPIGGDGLRR 58
Query: 67 NPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNV 126
+ +A + ++K+ KP++V+GFGGY ++ L+A + IP +VHEQN
Sbjct: 59 KSLKNLKEPLEGGRALRQAKEILKEFKPDLVIGFGGYVAVPALIAAPLAGIPLIVHEQNG 118
Query: 127 IMGKANRLLSW 137
I G N+LL W
Sbjct: 119 IPGLVNKLLPW 129
|
The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. Length = 136 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 8e-04
Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 22/116 (18%)
Query: 14 TGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWN 73
G L+ EL+ RG+ VY++ +P E V F P +
Sbjct: 13 VNGVATSIRRLAEELEKRGHEVYVVA--------PSYPGAPEEEEVVVVRPFRVPTFKYP 64
Query: 74 SLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMI-------LRIPSMVH 122
+ A + ++K+L P++V H+ +P G++ L IP +V
Sbjct: 65 DFRLPLPIPRALIIILKELGPDIV------HTHTPFSLGLLGLRVARKLGIP-VVA 113
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.. Length = 374 |
| >gnl|CDD|171505 PRK12446, PRK12446, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Score = 96.9 bits (241), Expect = 8e-21
Identities = 76/331 (22%), Positives = 153/331 (46%), Gaps = 37/331 (11%)
Query: 4 NNVILLVAGGTGGHVFPAVALSHELKNRGYAV-YLITDRRARSFITDFPADSIYEIVSSQ 62
I+ GG+ GHV P +A+ LK + + Y+ + + I + Y I S +
Sbjct: 1 MKKIVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIEKENIPYYSISSGK 60
Query: 63 VR-------FSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMIL 115
+R +PF LV+ K + + I+KLKP+V+ GG+ S+ ++ G +
Sbjct: 61 LRRYFDLKNIKDPF-----LVM--KGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLN 113
Query: 116 RIPSMVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIK---M 172
R+P ++HE ++ G AN++ I + K + K+I TG+P+R ++K
Sbjct: 114 RVPVLLHESDMTPGLANKIALRFASKIFVTFEEAAKHLPKEKVIYTGSPVREEVLKGNRE 173
Query: 173 KDIPYQSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEK 232
K + + +P + + GGS GAK ++ V +++ PE+ K ++ + + +
Sbjct: 174 KGLAFLGFSRKKPV-ITIMGGSLGAKKINETVREAL---PELLLKYQIVHLCGKGNLDDS 229
Query: 233 VQ-----KQYDELGCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPY 287
+Q +Q++ + ++ + + +I R+G+ + E + +P +L+P
Sbjct: 230 LQNKEGYRQFEYVH---------GELPDILAITDFVISRAGSNAIFEFLTLQKPMLLIPL 280
Query: 288 PHSVDQ-DQLHNAYYLQEGGGAKVITENFLS 317
+ DQ+ NA + G A V+ E ++
Sbjct: 281 SKFASRGDQILNAESFERQGYASVLYEEDVT 311
|
Length = 352 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 34/179 (18%), Positives = 65/179 (36%), Gaps = 23/179 (12%)
Query: 7 ILLVA-------GGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIV 59
ILLV GG HV L+ L RG+ V ++T + +
Sbjct: 2 ILLVTPEYPPSVGGAERHVL---ELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRP 58
Query: 60 SSQVRFSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPS 119
+R + + L RL+++ + +VV ++ LA +L IP
Sbjct: 59 PPLLRVRRLLLLLLLALRLR-------RLLRRERFDVVHAHDWLALLAAALAARLLGIPL 111
Query: 120 MVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLR--KIIVTGNPIRSSLIKMKDIP 176
++ + G+ L +++ +++ L R +II R L ++ +P
Sbjct: 112 VLTVHGLEFGRPGNELGLLLKLARA----LERRALRRADRIIAVSEATREELRELGGVP 166
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.. Length = 374 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 41/168 (24%), Positives = 65/168 (38%), Gaps = 24/168 (14%)
Query: 21 AVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWK 80
+ L++ L RGY V L+ R + E++ S V+ V +
Sbjct: 18 LLNLANGLDKRGYDVTLVVLRDEGDY---------LELLPSNVKLIPVRVLKLKSLRDLL 68
Query: 81 AFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVIMGKANRLLSWGVQ 140
A + RL++K KP+VV+ L L +V E N + + R L +
Sbjct: 69 AILRLRRLLRKEKPDVVISHLTTTPNVLALLAARLGTKLIVWEHNSLSLELKRKLRLLLL 128
Query: 141 II-----ARGLVS-SQ--KKVLLR-------KIIVTGNPIRSSLIKMK 173
I A +V+ S+ K+ LL+ KI V NPI I+
Sbjct: 129 IRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRAL 176
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.. Length = 353 |
| >gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 19/117 (16%)
Query: 7 ILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFIT-----------DFPADSI 55
+L+ G+ G V P VAL+ L+ G+ V + T + D
Sbjct: 3 VLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEAAGLEFVPVGGDPDELLA 62
Query: 56 YEIVSSQVRFSNP----FVFWNSLVILWKAFIASLRLIKKLKPNVVVG----FGGYH 104
++ + P + + P++VV F G
Sbjct: 63 SPERNAGLLLLGPGLLLGALRLLRREAEAMLDDLVAAARDWGPDLVVADPLAFAGAV 119
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.. Length = 401 |
| >gnl|CDD|178215 PLN02605, PLN02605, monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.004
Identities = 79/353 (22%), Positives = 132/353 (37%), Gaps = 97/353 (27%)
Query: 64 RFSNPFVFWNSLVILWKAFIA--SLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMV 121
+NP + S AF+A + + K KP+++V S+ PL+ + LR+
Sbjct: 69 HGTNPRLIHQSYFAATSAFVAREVAKGLMKYKPDIIV------SVHPLMQHVPLRVLRWQ 122
Query: 122 HEQ--------NVI--MGKANRLLSW---GV------------QIIARGLVSSQKKVLLR 156
++ V+ +G + +W GV + + RGL SQ
Sbjct: 123 GKELGKKIPFTTVVTDLGTCHP--TWFHKGVTRCFCPSEEVAKRALKRGLEPSQ------ 174
Query: 157 KIIVTGNPIRSSL---IKMKDIPYQSSDLDQPFHL---LVFGGSQGAKVFSDIVPKSIAL 210
I V G PIR S ++ KD +L L L+ GG +G + AL
Sbjct: 175 -IRVYGLPIRPSFARAVRPKD--ELRRELGMDEDLPAVLLMGGGEGMGPLEETAR---AL 228
Query: 211 IPEMQRKRLV-IMQQV-----REDDKEKVQKQYDELGCKATLAC--FFKDIERYIVEANL 262
+ K L + QV R +K+Q + + K + F ++E ++ +
Sbjct: 229 GDSLYDKNLGKPIGQVVVICGR---NKKLQSKLESRDWKIPVKVRGFVTNMEEWMGACDC 285
Query: 263 LICRSGALTVSEIAVIGRPAIL-----------VPYPHSVDQDQLHNAYYLQEGGGAKVI 311
+I ++G T++E + G P IL VPY VD G
Sbjct: 286 IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPY--VVD-------------NGFGAF 330
Query: 312 TENFLSPERLAEELCSAMK-KPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLAH 363
+E SP+ +A + K L M++ +P+AV D+V L
Sbjct: 331 SE---SPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVF---DIVHDLHE 377
|
Length = 382 |
Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
| Identity | Alignment graph | Length | Definition | Probability |
| Target | 369 | N-acetylglucosaminyl transferase [Candidatus Liberibact | ||
| PRK00726 | 359 | murG N-acetylglucosaminyl transferase; Provisional | 100.0 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferase, th | 100.0 | |
| PRK12446 | 352 | N-acetylglucosaminyl transferase; Reviewed | 100.0 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine tr | 100.0 | |
| TIGR01133 | 368 | murG undecaprenyldiphospho-muramoylpentapeptide beta-N- | 100.0 | |
| PRK13609 | 388 | diacylglycerol glucosyltransferase; Provisional | 100.0 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 100.0 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a group of | 100.0 | |
| TIGR01426 | 429 | MGT glycosyltransferase, MGT family; InterPro: IPR00632 | 99.97 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyltrans | 99.96 | |
| PRK00025 | 382 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.92 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protein, pr | 99.89 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function predic | 99.87 | |
| pfam02684 | 373 | LpxB Lipid-A-disaccharide synthetase. This is a family | 99.86 | |
| PRK10307 | 415 | predicted glycosyl transferase; Provisional | 99.85 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to the G | 99.85 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related to t | 99.85 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related to th | 99.84 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related to th | 99.82 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related to th | 99.82 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related to th | 99.82 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related to th | 99.8 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related to th | 99.79 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related to th | 99.78 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to the G | 99.78 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system associat | 99.78 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely related t | 99.78 | |
| PRK01021 | 607 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.78 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related to th | 99.77 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely relate | 99.77 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltransfera | 99.76 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related to th | 99.76 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related to th | 99.76 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related to th | 99.75 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol | 99.75 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related to t | 99.75 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelope bio | 99.75 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related to t | 99.74 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to the G | 99.73 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related to th | 99.7 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein family is | 99.64 | |
| PRK09922 | 361 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-gala | 99.6 | |
| PRK05749 | 423 | 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | 99.6 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-h | 99.59 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related to th | 99.58 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to the G | 99.54 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope | 99.54 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related to th | 99.47 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP | 99.45 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system associat | 99.42 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely related to | 99.41 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell | 99.31 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Function | 99.26 | |
| PRK10125 | 405 | predicted glycosyl transferase; Provisional | 99.02 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP | 98.96 | |
| TIGR02149 | 416 | glgA_Coryne glycogen synthase, Corynebacterium family; | 98.79 | |
| TIGR02472 | 445 | sucr_P_syn_N sucrose-phosphate synthase, putative, glyc | 98.76 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the transfer o | 98.71 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related to th | 98.54 | |
| KOG2941 | 444 | consensus | 98.24 | |
| KOG1111 | 426 | consensus | 97.59 | |
| TIGR00236 | 380 | wecB UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR | 96.77 | |
| pfam04101 | 167 | Glyco_tran_28_C Glycosyltransferase family 28 C-termina | 100.0 | |
| pfam00201 | 501 | UDPGT UDP-glucoronosyl and UDP-glucosyl transferase. | 99.84 | |
| pfam00534 | 172 | Glycos_transf_1 Glycosyl transferases group 1. Mutation | 99.17 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related to th | 99.04 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related to th | 98.94 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is most cl | 98.87 | |
| PRK00654 | 476 | glgA glycogen synthase; Provisional | 98.81 | |
| TIGR02095 | 517 | glgA glycogen/starch synthases, ADP-glucose type; Inter | 96.45 | |
| PHA01630 | 333 | putative group 1 glycosyl transferase | 94.18 | |
| PRK02797 | 358 | 4-alpha-L-fucosyltransferase; Provisional | 93.38 | |
| TIGR02918 | 511 | TIGR02918 conserved hypothetical protein TIGR02918; Int | 93.08 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transferase, | 90.97 | |
| pfam07429 | 361 | Fuc4NAc_transf 4-alpha-L-fucosyltransferase (Fuc4NAc tr | 90.64 | |
| pfam03033 | 136 | Glyco_transf_28 Glycosyltransferase family 28 N-termina | 99.97 | |
| pfam08660 | 166 | Alg14 Oligosaccharide biosynthesis protein Alg14 like. | 99.66 | |
| KOG3339 | 211 | consensus | 97.71 | |
| PRK06849 | 387 | hypothetical protein; Provisional | 96.49 | |
| TIGR01179 | 341 | galE UDP-glucose 4-epimerase; InterPro: IPR005886 Synon | 96.26 | |
| PRK12778 | 760 | putative bifunctional 2-polyprenylphenol hydroxylase/gl | 95.19 | |
| PRK12775 | 993 | putative trifunctional 2-polyprenylphenol hydroxylase/g | 94.95 | |
| pfam06032 | 352 | DUF917 Protein of unknown function (DUF917). This famil | 94.62 | |
| pfam04413 | 186 | Glycos_transf_N 3-Deoxy-D-manno-octulosonic-acid transf | 93.7 | |
| PRK12311 | 332 | rpsB 30S ribosomal protein S2; Provisional | 92.69 | |
| TIGR01316 | 462 | gltA glutamate synthase (NADPH), homotetrameric; InterP | 91.61 | |
| TIGR03590 | 280 | PseG pseudaminic acid biosynthesis-associated protein P | 99.91 | |
| TIGR00661 | 353 | MJ1255 conserved hypothetical protein; InterPro: IPR005 | 99.08 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases catal | 98.66 | |
| pfam06258 | 308 | DUF1022 Protein of unknown function (DUF1022). This fam | 98.61 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [Cell | 98.3 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Provision | 98.08 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope | 98.0 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyl | 97.66 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 96.75 | |
| TIGR00215 | 393 | lpxB lipid-A-disaccharide synthase; InterPro: IPR003835 | 96.27 | |
| pfam02571 | 246 | CbiJ Precorrin-6x reductase CbiJ/CobK. This family cons | 95.79 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the transfer o | 99.63 | |
| pfam02350 | 346 | Epimerase_2 UDP-N-acetylglucosamine 2-epimerase. This f | 99.48 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to the G | 99.22 | |
| PRK10017 | 426 | putative pyruvyl transferase; Provisional | 98.53 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related to th | 99.62 | |
| KOG1192 | 496 | consensus | 99.55 | |
| pfam04007 | 335 | DUF354 Protein of unknown function (DUF354). Members of | 99.61 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisional | 97.97 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisional | 94.09 | |
| KOG3349 | 170 | consensus | 99.15 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknown] | 98.56 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related to th | 98.9 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related to t | 98.17 | |
| pfam04464 | 186 | Glyphos_transf CDP-Glycerol:Poly(glycerophosphate) glyc | 97.98 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis, out | 96.17 | |
| pfam06925 | 169 | MGDG_synth Monogalactosyldiacylglycerol (MGDG) synthase | 98.03 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Function | 96.9 | |
| COG1887 | 388 | TagB Putative glycosyl/glycerophosphate transferases in | 96.73 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family protein | 95.77 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Function | 95.73 | |
| KOG0853 | 495 | consensus | 95.69 | |
| KOG1387 | 465 | consensus | 95.65 | |
| PRK09814 | 337 | hypothetical protein; Provisional | 95.11 | |
| TIGR02468 | 1072 | sucrsPsyn_pln sucrose phosphate synthase; InterPro: IPR | 94.95 | |
| KOG4626 | 966 | consensus | 93.56 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase CsaB. T | 96.52 | |
| COG1171 | 347 | IlvA Threonine dehydratase [Amino acid transport and me | 90.33 | |
| PRK00652 | 334 | lpxK tetraacyldisaccharide 4'-kinase; Reviewed | 96.2 | |
| pfam02606 | 318 | LpxK Tetraacyldisaccharide-1-P 4'-kinase. This family c | 96.1 | |
| COG1663 | 336 | LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope | 95.96 | |
| pfam01370 | 235 | Epimerase NAD dependent epimerase/dehydratase family. T | 95.55 | |
| TIGR02114 | 253 | coaB_strep phosphopantothenate--cysteine ligase; InterP | 94.72 | |
| pfam04321 | 284 | RmlD_sub_bind RmlD substrate binding domain. L-rhamnose | 93.39 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 93.05 | |
| PRK05294 | 1063 | carB carbamoyl phosphate synthase large subunit; Review | 92.44 | |
| TIGR01137 | 527 | cysta_beta cystathionine beta-synthase; InterPro: IPR00 | 91.58 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 90.52 | |
| PRK00313 | 332 | lpxK tetraacyldisaccharide 4'-kinase; Provisional | 95.41 | |
| TIGR01369 | 1089 | CPSaseII_lrg carbamoyl-phosphate synthase, large subuni | 95.11 | |
| PRK07208 | 474 | hypothetical protein; Provisional | 93.92 | |
| PRK12745 | 259 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provisiona | 93.45 | |
| PRK06847 | 375 | hypothetical protein; Provisional | 93.35 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 93.26 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 92.62 | |
| PRK07236 | 386 | hypothetical protein; Provisional | 92.33 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 92.3 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 91.91 | |
| PRK06947 | 252 | glucose-1-dehydrogenase; Provisional | 91.87 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 91.62 | |
| PRK07326 | 235 | short chain dehydrogenase; Provisional | 91.41 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 91.11 | |
| PRK01906 | 339 | tetraacyldisaccharide 4'-kinase; Provisional | 90.87 | |
| PRK08163 | 396 | salicylate hydroxylase; Provisional | 90.8 | |
| pfam04127 | 197 | DFP DNA / pantothenate metabolism flavoprotein. The DNA | 90.66 | |
| pfam01075 | 249 | Glyco_transf_9 Glycosyltransferase family 9 (heptosyltr | 95.14 | |
| KOG0832 | 251 | consensus | 94.9 | |
| PRK05299 | 255 | rpsB 30S ribosomal protein S2; Provisional | 92.47 | |
| TIGR01011 | 227 | rpsB_bact ribosomal protein S2; InterPro: IPR005706 Rib | 91.93 | |
| cd01976 | 421 | Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitro | 91.65 | |
| cd06218 | 246 | DHOD_e_trans FAD/NAD binding domain in the electron tra | 93.06 | |
| cd06220 | 233 | DHOD_e_trans_like2 FAD/NAD binding domain in the electr | 90.47 | |
| PRK12377 | 248 | putative replication protein; Provisional | 93.0 | |
| PRK08057 | 241 | cobalt-precorrin-6x reductase; Reviewed | 91.58 |
| >PRK00726 murG N-acetylglucosaminyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=660.35 Aligned_cols=357 Identities=39% Similarity=0.606 Sum_probs=332.3 Q ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH-HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCC Q ss_conf 8769998788525620799999999965983999957237-676244468751687525656533123321110001211 Q gi|254781097|r 4 NNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRA-RSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAF 82 (369) Q Consensus 4 ~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (369) T Consensus 1 mkkI~i~~GGTGGHi~Palala~~L~~~g~ev~~ig~~~g~E~~~v~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~ 80 (359) T PRK00726 1 MKKILLAGGGTGGHVFPALALAEELKKRGWEVLWLGTKRGMEARLVPKAGIEFHFIPIGGLRRKGSLANLKAPFKLLKGV 80 (359) T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH T ss_conf 98899995886899999999999998387989999788268654044149838997778889878799999999999999 Q ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE Q ss_conf 01355542034442431265321024788862341101221532001567788999998741343222235566732530 Q gi|254781097|r 83 IASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTG 162 (369) Q Consensus 83 ~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~v~G~~nk~l~~~a~~v~~~~~~~~~~~~~~k~~~~G 162 (369) T Consensus 81 ~~~~~il~~~kPd~Vig~GGY~s~P~~laA~l~~iP~iiHEqN~v~G~aNr~l~~~a~~i~~~f~~~~~~~~~~k~~~~G 160 (359) T PRK00726 81 LQARKILKRFKPDVVVGFGGYVSGPAGLAARLLGIPLVIHEQNAVPGLANKLLARFAKKVATAFEETPKAFPKAKAVVTG 160 (359) T ss_pred HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCEEEECCHHHHHCCCCCCEEEEC T ss_conf 99999999749999997897412899999998299869974542356233788885097899775554037624559967 Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCC Q ss_conf 44432456543334433114478148986304322210233344544323202466067762025516776532210011 Q gi|254781097|r 163 NPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGC 242 (369) Q Consensus 163 ~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~ 242 (369) T Consensus 161 ~PvR~~~~~~~~~~~~~~-~~~~~~iLV~GGSqGa~~~N~~v~~~l~~l~~--~~~~~i~~~~G~~~~~~~~~~~~~~~~ 237 (359) T PRK00726 161 NPVREEILALPAPAFRLA-GRGPPTLLVVGGSQGARVLNEAVPEALALLPE--ELRIQVIHQTGKKDLEEVRAAYAELGV 237 (359) T ss_pred CCCCHHHHCCCHHHHHHC-CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH--CCCEEEEEECCCCHHHHHHHHHHHCCC T ss_conf 840277661433333210-47885799976852047899999999998765--259089998284039999999986599 Q ss_pred CCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHH Q ss_conf 11345444451444300448997254202333455296048753355248989998999998898899800019989999 Q gi|254781097|r 243 KATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLA 322 (369) Q Consensus 243 ~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~ 322 (369) T Consensus 238 ~~~v~~f~~~m~~~~~~aDlvIsRaGa~Ti~E~~~~g~P~IlIP~p~a~~~HQ~~NA~~l~~~gaa~~i~e~~~~~~~L~ 317 (359) T PRK00726 238 NAEVVPFIDDMAAAYAAADLVICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAAKLIPQSDLTPERLA 317 (359) T ss_pred CEEECCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHH T ss_conf 76975752318998740889998898326999998289869983687775389999999997899999531469999999 Q ss_pred HHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH Q ss_conf 99999861899999999999852783279999999999998 Q gi|254781097|r 323 EELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLAH 363 (369) Q Consensus 323 ~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~la~ 363 (369) T Consensus 318 ~~i~~ll~d~~~l~~m~~~~~~~~~~~a~~~i~~~i~~~~~ 358 (359) T PRK00726 318 EALLELLSDRERLEAMAEAARALGIPDAAERLADLIEKLAR 358 (359) T ss_pred HHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC T ss_conf 99999986999999999999724897899999999999853 |
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=632.10 Aligned_cols=349 Identities=36% Similarity=0.553 Sum_probs=323.8 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH-HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHH Q ss_conf 69998788525620799999999965983999957237-67624446875168752565653312332111000121101 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRA-RSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIA 84 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (369) T Consensus 1 ki~i~~GGTGGHi~Palala~~L~~~g~~V~~i~~~~g~e~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (350) T cd03785 1 RILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLEARLVPKAGIPLHTIPVGGLRRKGSLKKLKAPFKLLKGVLQ 80 (350) T ss_pred CEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH T ss_conf 98999478589999999999999978798999987836864234413994899768887888739999999999999999 Q ss_pred HHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC Q ss_conf 35554203444243126532102478886234110122153200156778899999874134322223556673253044 Q gi|254781097|r 85 SLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNP 164 (369) Q Consensus 85 ~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~v~G~~nk~l~~~a~~v~~~~~~~~~~~~~~k~~~~G~P 164 (369) T Consensus 81 ~~~~l~~~kPd~vi~~GGY~s~P~~laA~~~~iP~~ihEqN~v~G~anr~l~~~a~~i~~~f~~~~~~~~~~k~~~vG~P 160 (350) T cd03785 81 ARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPGLANRLLARFADRVALSFPETAKYFPKDKAVVTGNP 160 (350) T ss_pred HHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHCCCCCEEEECCHHHHHCCCCCCEEEECCC T ss_conf 99999964999999889810389999999729985565677225713233210039899857565412466777996885 Q ss_pred CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCC Q ss_conf 43245654333443311447814898630432221023334454432320246606776202551677653221001111 Q gi|254781097|r 165 IRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCKA 244 (369) Q Consensus 165 vR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~ 244 (369) T Consensus 161 vR~~~~~~~~~~~~~~~~~~~~~iLv~GGSqGa~~ln~~v~~~~~~l~~---~~~~ii~~~G~~~~~~~~~~~~~~~~~~ 237 (350) T cd03785 161 VREEILALDRERARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLR---KRLQVIHQTGKGDLEEVKKAYEELGVNY 237 (350) T ss_pred CCHHHHCCCHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH---CCCEEEEECCCCHHHHHHHHHHHCCCCE T ss_conf 2266641434467527898973999984872047899999999998764---4968999838400899999998669988 Q ss_pred CCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHH Q ss_conf 34544445144430044899725420233345529604875335524898999899999889889980001998999999 Q gi|254781097|r 245 TLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEE 324 (369) Q Consensus 245 ~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~ 324 (369) T Consensus 238 ~v~~f~~~m~~~l~~aDlvIsraGa~Ti~E~~~~g~P~IlIP~p~a~d~hQ~~NA~~l~~~g~a~~i~e~~~~~~~L~~~ 317 (350) T cd03785 238 EVFPFIDDMAAAYAAADLVISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAA 317 (350) T ss_pred EEECHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH T ss_conf 99251889999986198899779842599999819986998458777665999999999889999950024999999999 Q ss_pred HHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHH Q ss_conf 999861899999999999852783279999999 Q gi|254781097|r 325 LCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDL 357 (369) Q Consensus 325 i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~ 357 (369) T Consensus 318 i~~ll~d~~~l~~m~~~~~~~~~~~a~~~i~~~ 350 (350) T cd03785 318 LLELLSDPERLKAMAEAARSLARPDAAERIADL 350 (350) T ss_pred HHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHCC T ss_conf 999987999999999998745897999998459 |
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK12446 N-acetylglucosaminyl transferase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=628.48 Aligned_cols=345 Identities=20% Similarity=0.316 Sum_probs=306.4 Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH-HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCH Q ss_conf 769998788525620799999999965983999957237-6762444687516875256565331233211100012110 Q gi|254781097|r 5 NVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRA-RSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFI 83 (369) Q Consensus 5 ~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (369) T Consensus 2 kkIii~~GGTGGHi~Palala~~L~~~~~~v~~ig~~~g~e~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~ 81 (352) T PRK12446 2 KKIVFTGGGSAGHVTPNLAIIPKLIEDNWDISYIGSHQGIEKTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMKGVM 81 (352) T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 87999958758889999999999984899599998896054304450499689954477278552999999999999999 Q ss_pred HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC Q ss_conf 13555420344424312653210247888623411012215320015677889999987413432222355667325304 Q gi|254781097|r 84 ASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGN 163 (369) Q Consensus 84 ~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~v~G~~nk~l~~~a~~v~~~~~~~~~~~~~~k~~~~G~ 163 (369) T Consensus 82 ~s~~il~~~kPd~Vig~GGY~S~P~~lAA~ll~iP~~ihEqNav~G~aNr~l~~~a~~i~~~f~~~~~~~~~~k~~~tGn 161 (352) T PRK12446 82 DAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGLANKIALRFASKIFVTFEEAAKHLPKEKVIYTGS 161 (352) T ss_pred HHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCEEECCHHHHHCCCCCCEEECCC T ss_conf 99999996399999974987779999999985999699887467778999999870712899624552088673687488 Q ss_pred CCCHHHHHHHHHH-HHHHC-CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCC Q ss_conf 4432456543334-43311-447814898630432221023334454432320246606776202551677653221001 Q gi|254781097|r 164 PIRSSLIKMKDIP-YQSSD-LDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELG 241 (369) Q Consensus 164 PvR~~~~~~~~~~-~~~~~-~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~ 241 (369) T Consensus 162 PvR~~i~~~~~~~~~~~~~~~~~~~~iLV~GGSqGA~~iN~~v~~~l~~l~----~~~~iih~~g~~~~~~~~~~~---- 233 (352) T PRK12446 162 PVREEVLKGNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL----LKYQIVHLCGKGNLDDSLQNK---- 233 (352) T ss_pred CCCHHHHCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH----HCCEEEEECCCCCHHHHHHCC---- T ss_conf 620765403556678754888778579997375117999999999999985----197799992877156898501---- Q ss_pred CCCCCCCCC-CCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECC-CCCCCHHHHHHHHHHHCCCEEEEEHHCCCHH Q ss_conf 111345444-45144430044899725420233345529604875335-5248989998999998898899800019989 Q gi|254781097|r 242 CKATLACFF-KDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYP-HSVDQDQLHNAYYLQEGGGAKVITENFLSPE 319 (369) Q Consensus 242 ~~~~v~~f~-~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p-~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~ 319 (369) T Consensus 234 ~~~~~~~~~~~~m~~~~~~aDlvIsRAGAsTiaEl~~~g~PsIlIP~p~~a~~nHQ~~NA~~l~~~gaa~vi~e~~l~~~ 313 (352) T PRK12446 234 EGYRQFEYVHGELPDILAMTDFVISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVN 313 (352) T ss_pred CCCEECCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHH T ss_conf 36076572455499999849889977870289999982998899628987775759999999997798899641469999 Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH Q ss_conf 99999999861899999999999852783279999999999 Q gi|254781097|r 320 RLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEK 360 (369) Q Consensus 320 ~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~ 360 (369) T Consensus 314 ~L~~~i~~l~~n~~---~~~~~~kk~~~p~aa~~I~d~i~e 351 (352) T PRK12446 314 SLIKHVEELSHNNE---KYKTALKKYNGKEAIQTIIDHISE 351 (352) T ss_pred HHHHHHHHHHHCHH---HHHHHHHHCCCCCHHHHHHHHHHC T ss_conf 99999999984999---999999850795599999999851 |
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=590.78 Aligned_cols=355 Identities=36% Similarity=0.568 Sum_probs=328.6 Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCE-EEEE-ECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCC Q ss_conf 769998788525620799999999965983-9999-57237676244468751687525656533123321110001211 Q gi|254781097|r 5 NVILLVAGGTGGHVFPAVALSHELKNRGYA-VYLI-TDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAF 82 (369) Q Consensus 5 ~~ili~~gGTGGHi~palala~~L~~~g~~-v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (369) T Consensus 1 ~~ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357) T COG0707 1 KKIVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVKQYGIEFELIPSGGLRRKGSLKLLKAPFKLLKGV 80 (357) T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH T ss_conf 93999966776657799999999996097179994466344432054567079998646556565066788699999999 Q ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE Q ss_conf 01355542034442431265321024788862341101221532001567788999998741343222235566732530 Q gi|254781097|r 83 IASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTG 162 (369) Q Consensus 83 ~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~v~G~~nk~l~~~a~~v~~~~~~~~~~~~~~k~~~~G 162 (369) T Consensus 81 ~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~ank~~~~~a~~V~~~f~~~~~~~~~~~~~~tG 160 (357) T COG0707 81 LQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGLANKILSKFAKKVASAFPKLEAGVKPENVVVTG 160 (357) T ss_pred HHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHEEEEEECCCHHHCCCCCCCEEEEC T ss_conf 99999999709989995798634649999861699879997346642656453230125771251121157866437857 Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCC Q ss_conf 44432456543334433114478148986304322210233344544323202466067762025516776532210011 Q gi|254781097|r 163 NPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGC 242 (369) Q Consensus 163 ~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~ 242 (369) T Consensus 161 ~Pvr~~~~~~~~~~~~~~~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~----~~~v~~~~G~~~~~~~~~~~~~~~~ 236 (357) T COG0707 161 IPVRPEFEELPAAEVRKDGRLDKKTILVTGGSQGAKALNDLVPEALAKLAN----RIQVIHQTGKNDLEELKSAYNELGV 236 (357) T ss_pred CCCCHHHHCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC----CEEEEEECCCCHHHHHHHHHHCCCC T ss_conf 846366521635544320378984899988824279999999999872121----6699997697369999998720681 Q ss_pred CCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHH Q ss_conf 11345444451444300448997254202333455296048753355248989998999998898899800019989999 Q gi|254781097|r 243 KATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLA 322 (369) Q Consensus 243 ~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~ 322 (369) T Consensus 237 -~~v~~f~~dm~~~~~~ADLvIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~ 315 (357) T COG0707 237 -VRVLPFIDDMAALLAAADLVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLA 315 (357) T ss_pred -EEEEEHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHH T ss_conf -8997667539999986458986786649999999589889965898764418999999996797699425547999999 Q ss_pred HHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH Q ss_conf 999998618999999999998527832799999999999985 Q gi|254781097|r 323 EELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLAHV 364 (369) Q Consensus 323 ~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~la~~ 364 (369) T Consensus 316 ~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~~~~~~~~~~ 357 (357) T COG0707 316 ELILRLLSNPEKLKAMAENAKKLGKPDAAERIADLLLALAKK 357 (357) T ss_pred HHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC T ss_conf 999999659899999999998717987899999999998509 |
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; InterPro: IPR006009 The murG gene of Escherichia coli encodes the N-acetylglucosaminyltransferase, UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, responsible for the final step in the formation of the lipid-linked disaccharide-pentapeptide subunit of peptidoglycan | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=590.53 Aligned_cols=354 Identities=34% Similarity=0.522 Sum_probs=326.3 Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCC--CEEEEEECHHH-HHHHCC-CCCCCEEEEECCCCCCCCHHHHHHHHH Q ss_conf 99887699987885256207999999999659--83999957237-676244-468751687525656533123321110 Q gi|254781097|r 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRG--YAVYLITDRRA-RSFITD-FPADSIYEIVSSQVRFSNPFVFWNSLV 76 (369) Q Consensus 1 M~~~~~ili~~gGTGGHi~palala~~L~~~g--~~v~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 76 (369) T Consensus 2 ~~~~~~~~~~gGGTGG-~fPAlA~a~~l~~~~~~~~v~~lG~~~g~e~~lv~~~~~~~~~~i~~~gl~~~~~~~~~~~~~ 80 (368) T TIGR01133 2 MNKMKKVALAGGGTGG-IFPALAVAEELIKRGPEVEVVWLGTKRGLEERLVPSKEGIEFLTIPVGGLRRKGSKKLLKLPL 80 (368) T ss_pred CCCCEEEEEECCCCCH-HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHH T ss_conf 9882289997278302-689999999999748936999850677500003432157417777401003655101467889 Q ss_pred -HCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCC-CCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC Q ss_conf -0012110135554203444243126532102478886234-11012215320015677889999987413432222355 Q gi|254781097|r 77 -ILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILR-IPSMVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVL 154 (369) Q Consensus 77 -~~~~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~-iP~vihEqN~v~G~~nk~l~~~a~~v~~~~~~~~~~~~ 154 (369) T Consensus 81 ~~~~~~~~~a~~~l~~~~p~~v~G~GGY~s~P~~~AA~l~g~iP~~-~EQN~~pG~~Nk~ls~~A~~V~~~f~~~~~~~~ 159 (368) T TIGR01133 81 LKLLKAVLQARRILKKFKPDVVVGFGGYVSGPAGLAAKLLGRIPLI-LEQNAVPGLTNKLLSRFAKRVLVSFPGAKKFFP 159 (368) T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCEE-EEECCHHHHHHHHHHHHHCEEEEECHHHHCCCC T ss_conf 9999999999999860087479874736789999998766799489-861541257888878874431110513322676 Q ss_pred -CCCCEEEECCCCHHHHHHHHHHH--HHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH Q ss_conf -66732530444324565433344--331144781489863043222102333445443232024660677620255167 Q gi|254781097|r 155 -LRKIIVTGNPIRSSLIKMKDIPY--QSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKE 231 (369) Q Consensus 155 -~~k~~~~G~PvR~~~~~~~~~~~--~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~ 231 (369) T Consensus 160 ~~~~~~~~g~pvr~~~~~~~~~~~~~~~~~~~~~~~ilv~GGSQGA~~lN~~vp~~~~~L~~~~--~~~~~~~~g~~~~~ 237 (368) T TIGR01133 160 AAEKVVVVGNPVREEIRSLPAARARKRFKLRPGKLRILVLGGSQGAKILNELVPKALAKLAEKG--LILVIIQGGKGDLE 237 (368) T ss_pred CCCCEEEECCHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC--CEEEEEECCHHHHH T ss_conf 6675687014134543037825688862168998279996273768999999999998864016--52588876637799 Q ss_pred HHHHHHHHCC-CCCCCCCCCC--CCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCC-CHHHHHHHHHHHCCC Q ss_conf 7653221001-1113454444--51444300448997254202333455296048753355248-989998999998898 Q gi|254781097|r 232 KVQKQYDELG-CKATLACFFK--DIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVD-QDQLHNAYYLQEGGG 307 (369) Q Consensus 232 ~~~~~~~~~~-~~~~v~~f~~--~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~-~hQ~~NA~~l~~~G~ 307 (369) T Consensus 238 ~~~~~y~~~~l~~~~~~~f~~~~dm~~~y~~ADLvIsRAGA~T~~El~a~G~PaIliPyP~a~~r~~Q~~NA~~l~~~ga 317 (368) T TIGR01133 238 KVKNVYSELGLVAAKITPFIDNEDMAAAYAAADLVISRAGASTVAELAAAGVPAILIPYPYAAKRDDQYYNAKFLEDAGA 317 (368) T ss_pred HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCC T ss_conf 99998521371022210377875799999874040023337899999971777376258754681789999999973446 Q ss_pred EEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH Q ss_conf 899800019989999999998618999999999998527832799999999 Q gi|254781097|r 308 AKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLV 358 (369) Q Consensus 308 a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i 358 (369) T Consensus 318 g~~~~q~~~~~e~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 368 (368) T TIGR01133 318 GIVIEQKELLTEKLVSALLKLLKDPARLEEMAEAARKLAKPDAAKRIAEAL 368 (368) T ss_pred CEEEHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHC T ss_conf 546402204768999998741610899999999999861572779999949 |
The enzyme is peripherally associated with the inner face of the cytoplasmic membrane. Therefore, the peptidoglycan subunit is completely assembled before it traverses the cytoplasmic membrane .; GO: 0050511 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity, 0019277 UDP-N-acetylgalactosamine biosynthetic process, 0009276 1-2nm peptidoglycan-based cell wall. |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=368.81 Aligned_cols=337 Identities=20% Similarity=0.227 Sum_probs=237.5 Q ss_pred CCCCCEEEEECCCCH-HHHHHHHHHHHHHHHCCCEEEEEECHHHHH--HHCCCCCCCEEEE-ECCCCCCCC--------H Q ss_conf 998876999878852-562079999999996598399995723767--6244468751687-525656533--------1 Q gi|254781097|r 1 MSENNVILLVAGGTG-GHVFPAVALSHELKNRGYAVYLITDRRARS--FITDFPADSIYEI-VSSQVRFSN--------P 68 (369) Q Consensus 1 M~~~~~ili~~gGTG-GHi~palala~~L~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~--------~ 68 (369) T Consensus 1 ~~~~kKVLILtas~G~GH~~AA~AL~e~l~~~~~~~v~v~D~~~~~~p~~~~~-~~~~Yl~~~~~~p~l~~~~Y~~~~~~ 79 (388) T PRK13609 1 MIKNPKVLILTAHYGNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESHPVITDI-TKYLYLKSYTIGKELYRLFYYGVEKI 79 (388) T ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 99899799997888827899999999999835998199985143027048889-98888888553588999999643222 Q ss_pred -HHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH-----HCCCCCEEECCCCCCHHHHHHHHHHHHHH Q ss_conf -233211100012110135554203444243126532102478886-----23411012215320015677889999987 Q gi|254781097|r 69 -FVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGM-----ILRIPSMVHEQNVIMGKANRLLSWGVQII 142 (369) Q Consensus 69 -~~~~~~l~~~~~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~-----~l~iP~vihEqN~v~G~~nk~l~~~a~~v 142 (369) T Consensus 80 ~~~~~~~~~-~~~~~~~l~~li~~~kPDvII~T-----~P~~~l~~lk~~~~~~iP~~tViTD~~--~H~~Wi~~~~D~y 151 (388) T PRK13609 80 YDKKIASWY-ANFGRKRLKLLLQAEKPDIVINT-----FPIIAVPELKKQTGISIPVYNVLTDFC--VHKIWIHREVDRY 151 (388) T ss_pred CCHHHHHHH-HHHHHHHHHHHHHHCCCCEEEEC-----CCHHHHHHHHHHCCCCCCEEEEECCCC--CHHHHCCCCCCEE T ss_conf 215678999-99979999999998295999988-----878999999984599998899947852--0464557899979 Q ss_pred HCCCCCCCC-----CCCCCCCEEEECCCCHHHHHHHH--HHHHHHCC-CCCCEEEEEECCCCC-CCHHHHHHHHHHHHHH Q ss_conf 413432222-----35566732530444324565433--34433114-478148986304322-2102333445443232 Q gi|254781097|r 143 ARGLVSSQK-----KVLLRKIIVTGNPIRSSLIKMKD--IPYQSSDL-DQPFHLLVFGGSQGA-KVFSDIVPKSIALIPE 213 (369) Q Consensus 143 ~~~~~~~~~-----~~~~~k~~~~G~PvR~~~~~~~~--~~~~~~~~-~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~ 213 (369) T Consensus 152 ~Vase~~k~~l~~~Gv~~~kI~vtGiPVr~~F~~~~~k~~~r~~lgL~~d~~~vLimgGg~G~~g~i~~l----~~~L~~ 227 (388) T PRK13609 152 FVATDHVKEVMVDIGVPAEQIVETGIPIRSSFELKINPDIIYNKYQLCKNKKILLIVAGAHGVLGNVKEL----CQSFMS 227 (388) T ss_pred EECCHHHHHHHHHHCCCHHHEEEECCCCCHHHCCCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHH----HHHHHC T ss_conf 9398999999998099888999889843878727588789999828998784799976601211479999----999745 Q ss_pred HCCCCCEEEEEECCCC--HHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEE-ECCCC Q ss_conf 0246606776202551--67765322100111134544445144430044899725420233345529604875-33552 Q gi|254781097|r 214 MQRKRLVIMQQVREDD--KEKVQKQYDELGCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILV-PYPHS 290 (369) Q Consensus 214 ~~~~~~~v~~~~g~~~--~~~~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlI-P~p~a 290 (369) T Consensus 228 --~~~~qiiVVcGrN~~L~~~L~~~~~~~~~~v~vlGf~~~~~~~~~~~d~~i~k~Gg~t~~E~~~~~~P~i~~~~~p-- 303 (388) T PRK13609 228 --VPDLQVVVVCGKNEALKQDLVGLQETNPDALKVFGYVENIDELFRVTSCMITKPGGITLSEAAALQVPVILYKPVP-- 303 (388) T ss_pred --CCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCEEECCCCC-- T ss_conf --8992499990899899999998875079946995045209999985759995786458999999489989706899-- Q ss_pred CCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH Q ss_conf 4898999899999889889980001998999999999861899999999999852783279999999999 Q gi|254781097|r 291 VDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEK 360 (369) Q Consensus 291 ~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~ 360 (369) T Consensus 304 --gqe~~N~~~~~~~g~~~~~~----~~~~~~~~~~~ll~~~~~l~~m~~~~~~~~~p~aa~~I~~~il~ 367 (388) T PRK13609 304 --GQENENAMYFERKGAAVVIR----DDSEVFAKTEALLQDDMKLLQMKEAMKSIYLPEPADHIVDTILA 367 (388) T ss_pred --CHHHHHHHHHHHCCCEEEEC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH T ss_conf --61677799999789879979----99999999999976999999999999862798589999999998 |
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=355.33 Aligned_cols=343 Identities=16% Similarity=0.237 Sum_probs=238.2 Q ss_pred CCCCCEEEEECCCCH-HHHHHHHHHHHHHHHCCCE-EEEEE-CHHHHHHHCCCCC---CCEEEE-----ECC--CCCCCC Q ss_conf 998876999878852-5620799999999965983-99995-7237676244468---751687-----525--656533 Q gi|254781097|r 1 MSENNVILLVAGGTG-GHVFPAVALSHELKNRGYA-VYLIT-DRRARSFITDFPA---DSIYEI-----VSS--QVRFSN 67 (369) Q Consensus 1 M~~~~~ili~~gGTG-GHi~palala~~L~~~g~~-v~~~~-~~~~~~~~~~~~~---~~~~~~-----~~~--~~~~~~ 67 (369) T Consensus 2 ~~~~KKVLILtas~G~GH~~AA~AL~~~l~~~~~~~~~v~~~D~~~--~~~p~~~~~~~~~Yl~~~k~~p~ly~~~Y~~~ 79 (391) T PRK13608 2 VTQNKKILIITGSFGNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFM--EAHPILTSICKKWYINSFKYFRNMYKGFYYSR 79 (391) T ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 9888879999689883799999999999985099966999913787--64841888899999999999999999898548 Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH-----HCCCCCEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 1233211100012110135554203444243126532102478886-----23411012215320015677889999987 Q gi|254781097|r 68 PFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGM-----ILRIPSMVHEQNVIMGKANRLLSWGVQII 142 (369) Q Consensus 68 ~~~~~~~l~~~~~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~-----~l~iP~vihEqN~v~G~~nk~l~~~a~~v 142 (369) T Consensus 80 ~~~~~~~~~~-~~~~~kl~~~L~~~kPDvII~T--~---P~~~~s~lk~~~~~~iP~~tViTD~~--~H~~W~~~~~D~y 151 (391) T PRK13608 80 PDKLDKCFYK-YYGLNKLINLLIKEKPDLILLT--F---PTPVMSVLTEQFNINIPVATVMTDYR--LHKNWITPYSTRY 151 (391) T ss_pred CHHHHHHHHH-HHHHHHHHHHHHHHCCCEEEEC--C---HHHHHHHHHHHCCCCCCEEEEECCHH--HHHHHCCCCCCEE T ss_conf 4067799999-9889999999998492999999--8---28999999982499998899958713--3230368999979 Q ss_pred HCCCCCCCC-----CCCCCCCEEEECCCCHHHHHHHHHH--HHHHCCC-CCCEEEEEECCCCCCC-HHHHHHHHHHHHHH Q ss_conf 413432222-----3556673253044432456543334--4331144-7814898630432221-02333445443232 Q gi|254781097|r 143 ARGLVSSQK-----KVLLRKIIVTGNPIRSSLIKMKDIP--YQSSDLD-QPFHLLVFGGSQGAKV-FSDIVPKSIALIPE 213 (369) Q Consensus 143 ~~~~~~~~~-----~~~~~k~~~~G~PvR~~~~~~~~~~--~~~~~~~-~~~~ILv~GGS~Ga~~-ln~~v~~~~~~l~~ 213 (369) T Consensus 152 ~Va~~~~~~~l~~~Gi~~~kI~vtGIPV~~~F~~~~~~~~~~~~~~l~~~~~~iLv~gG~~G~~~~~~~~i~----~ll~ 227 (391) T PRK13608 152 YVATKETKQDFIDVGIDPSTVKVTGIPIDNKFETPINQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMIT----DILA 227 (391) T ss_pred EECCHHHHHHHHHCCCCHHHEEEEEEECCHHHCCCCCHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHH----HHHH T ss_conf 969999999999849997688998343586773755678999971899777689996886310246999999----9971 Q ss_pred HCCCCCEEEEEECCCC--HHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEE-ECCCC Q ss_conf 0246606776202551--67765322100111134544445144430044899725420233345529604875-33552 Q gi|254781097|r 214 MQRKRLVIMQQVREDD--KEKVQKQYDELGCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILV-PYPHS 290 (369) Q Consensus 214 ~~~~~~~v~~~~g~~~--~~~~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlI-P~p~a 290 (369) T Consensus 228 -~~~~~qivvvcGrN~~L~~~L~~~~~~-~~~v~vlG~t~~m~~lM~asDllITKpGGlT~sEAla~~lPmii~~piP-- 303 (391) T PRK13608 228 -KSANAQVVMICGKSKELKRSLTAKFKS-NENVLILGYTKHMNEWMASSQLMITKPGGITITEGFARCIPMIFLNPAP-- 303 (391) T ss_pred -CCCCCEEEEEECCCHHHHHHHHHHHCC-CCCEEEECCCCCHHHHHHHCCEEEECCCHHHHHHHHHHCCCEEECCCCC-- T ss_conf -599965999908999999999976245-9976997070519999986529996786679999999589989757999-- Q ss_pred CCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 48989998999998898899800019989999999998618999999999998527832799999999999985553 Q gi|254781097|r 291 VDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLAHVKVD 367 (369) Q Consensus 291 ~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~la~~k~~ 367 (369) T Consensus 304 --GQEe~Na~~l~~~G~a~~~~----~~~~~~~~v~~l~~~~~~l~~m~~~~~~~~~p~a~~~I~~~~~~l~~~~~~ 374 (391) T PRK13608 304 --GQELENALYFEEKGFGKIAD----TPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391) T ss_pred --CCHHHHHHHHHHCCCEEEEC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC T ss_conf --74466799999689768859----999999999998559999999999999717996299999999998724256 |
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=249.65 Aligned_cols=338 Identities=18% Similarity=0.154 Sum_probs=208.5 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCC------------CCCCHHHHHH Q ss_conf 6999878852562079999999996598399995723767624446875168752565------------6533123321 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQV------------RFSNPFVFWN 73 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 73 (369) T Consensus 2 ril~~~~~~~GH~~P~l~lA~~L~~rGh~Vt~~~~~~~~~~i~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401) T cd03784 2 RVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEA-AGLEFVPVGGDPDELLASPERNAGLLLLGPGLLLG 80 (401) T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH-CCCEEEECCCCHHHHHHCCCCCCCCCCCCHHHHHH T ss_conf 79998798575899999999999988995999938788889997-79868876987777642111233334540557999 Q ss_pred HHHH----CCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCC---------CCHHHH-------- Q ss_conf 1100----0121101355542034442431265321024788862341101221532---------001567-------- Q gi|254781097|r 74 SLVI----LWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNV---------IMGKAN-------- 132 (369) Q Consensus 74 ~l~~----~~~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~---------v~G~~n-------- 132 (369) T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d--~~~~~~~~~A~~~giP~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 158 (401) T cd03784 81 ALRLLRREAEAMLDDLVAAARDWGPDLVVAD--PLAFAGAVAAEALGIPAVRLLLGPDTPTSAFPPPLGRANLRLYALLE 158 (401) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC--CCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH T ss_conf 9999999999999999999616799889989--70789999999929998999566654533256741024431045555 Q ss_pred ---------HHHHHHHHHHHCCCCC---------------CCCCC---CCCCCEEEECCCCHHHHH-HHHHH-HHHHCCC Q ss_conf ---------7889999987413432---------------22235---566732530444324565-43334-4331144 Q gi|254781097|r 133 ---------RLLSWGVQIIARGLVS---------------SQKKV---LLRKIIVTGNPIRSSLIK-MKDIP-YQSSDLD 183 (369) Q Consensus 133 ---------k~l~~~a~~v~~~~~~---------------~~~~~---~~~k~~~~G~PvR~~~~~-~~~~~-~~~~~~~ 183 (369) T Consensus 159 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 237 (401) T cd03784 159 AELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPPPPDWPRFDLVTGYGFRDVPYNGPPPPELWLFLA-A 237 (401) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHCC-C T ss_conf 555554578899999998399965420004784001212555565766444551227887777777888856775135-6 Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEE Q ss_conf 78148986304322210233344544323202466067762025516776532210011113454444514443004489 Q gi|254781097|r 184 QPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCKATLACFFKDIERYIVEANLL 263 (369) Q Consensus 184 ~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlv 263 (369) T Consensus 238 ~~~vVyvs~GS~~~~~~~~~~~~~~~~l~~~---~~~~i~~~~~~~~~-----~~~~~~nv~i~~~~p-q~~iL~~~~~~ 308 (401) T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG-----AEDLPDNVRVVDFVP-HDWLLPRCAAV 308 (401) T ss_pred CCCEEEEECCCCHHCCHHHHHHHHHHHHHHC---CCEEEEEECCCCCC-----CCCCCCCEEEECCCC-HHHHHHHCCEE T ss_conf 9976999788301028999999999999966---98499996787666-----556899789956789-89997437999 Q ss_pred EECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHH Q ss_conf 97254202333455296048753355248989998999998898899800019989999999998618999999999998 Q gi|254781097|r 264 ICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVS 343 (369) Q Consensus 264 IsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~ 343 (369) T Consensus 309 ItHgG~~s~~Eal~~GvP~v~~P~~--~--DQ~~nA~rv~~~G~G~~l~~~~~t~e~l~~av~~lL~~~~~~-~a~~~~~ 383 (401) T cd03784 309 VHHGGAGTTAAALRAGVPQLVVPFF--G--DQPFWAARVAELGAGPALDPRELTAERLAAALRRLLDPPSRR-RAAALLR 383 (401) T ss_pred EECCCHHHHHHHHHCCCCEEECCCC--C--CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHH-HHHHHHH T ss_conf 9668758999999819998953775--5--689999999987971277835699999999999994899999-9999999 Q ss_pred HCCCCHHHHHHHHHHHHH Q ss_conf 527832799999999999 Q gi|254781097|r 344 MKGKPQAVLMLSDLVEKL 361 (369) Q Consensus 344 ~~~~~~aa~~i~~~i~~l 361 (369) T Consensus 384 ~~~~~~g~~~aa~~ie~l 401 (401) T cd03784 384 RIREEDGVPSAADVIERL 401 (401) T ss_pred HHHHCCCHHHHHHHHHCC T ss_conf 987558889999998439 |
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >TIGR01426 MGT glycosyltransferase, MGT family; InterPro: IPR006326 These sequences belong to the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-31 Score=235.34 Aligned_cols=325 Identities=18% Similarity=0.177 Sum_probs=212.9 Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCC-CCCCEEEEECCC---CCCC-----CH--HHHHHHHHHCCC--- Q ss_conf 256207999999999659839999572376762444-687516875256---5653-----31--233211100012--- Q gi|254781097|r 15 GGHVFPAVALSHELKNRGYAVYLITDRRARSFITDF-PADSIYEIVSSQ---VRFS-----NP--FVFWNSLVILWK--- 80 (369) Q Consensus 15 GGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~-----~~--~~~~~~l~~~~~--- 80 (369) T Consensus 6 ~GHVNPtL~v~~ELV~RGh~VTY~~t~ef~~~v~~~GA~~~~Y~~~~~~~~~~~~~~~sa~~~~~~~~~~~~~~ll~~~~ 85 (429) T TIGR01426 6 YGHVNPTLGVVEELVARGHRVTYATTEEFADAVAAAGAEALLYGSALEGDPDMPREEESAENMTEEELLDIIEKLLDESL 85 (429) T ss_pred CCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 57657657899999845974663178889999997298588848677765456510046210323458899999999999 Q ss_pred -CCHHHHHHHHHCCCCEEEECCCCCC--HHHHHHHHHCCCCCEE----------ECC-C-------------CCCHH--- Q ss_conf -1101355542034442431265321--0247888623411012----------215-3-------------20015--- Q gi|254781097|r 81 -AFIASLRLIKKLKPNVVVGFGGYHS--ISPLLAGMILRIPSMV----------HEQ-N-------------VIMGK--- 130 (369) Q Consensus 81 -~~~~~~~ii~~~kPDvVi~tGGy~s--~P~~iaA~~l~iP~vi----------hEq-N-------------~v~G~--- 130 (369) T Consensus 86 ~~Lp~l~~~~~~d~pDlv~yD--~a~~l~~G~llA~~l~~P~i~~~p~fA~~~~~~~~~~avqdPtadrGeea~~p~~~~ 163 (429) T TIGR01426 86 SLLPQLEEAYKGDRPDLVVYD--IATPLWAGRLLARKLDVPVISSFPTFASNEEFEEMQRAVQDPTADRGEEALSPIGED 163 (429) T ss_pred HHHHHHHHHHCCCCCCEEEEC--HHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHH T ss_conf 999999997148998789853--131568999987650788689865455536514567743476655542015788825 Q ss_pred -------HHH------------HHHHHHH---HHHCC--------CCC-------CCC------CCCCCC-CEEEECCC- Q ss_conf -------677------------8899999---87413--------432-------222------355667-32530444- Q gi|254781097|r 131 -------ANR------------LLSWGVQ---IIARG--------LVS-------SQK------KVLLRK-IIVTGNPI- 165 (369) Q Consensus 131 -------~nk------------~l~~~a~---~v~~~--------~~~-------~~~------~~~~~k-~~~~G~Pv- 165 (369) T Consensus 164 ~~~~~~~~~r~seqmelfgL~~y~~~~~~ll~~~~~~~~p~~~l~~~~~dlnlv~~pk~Fq~~~e~fDd~tf~FVGP~~g 243 (429) T TIGR01426 164 SLEEAAIAERFSEQMELFGLAEYVARLSALLEEHGITAPPVEFLAAPRRDLNLVYTPKAFQPAGETFDDRTFKFVGPCIG 243 (429) T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEECCHHHCCCCEEECCCCCEECCCCCC T ss_conf 65137787633578899999999999999998607986343887337899644764621120641115740133287887 Q ss_pred -CHHHHHHHHHH-HHHHCCCCCCEEEEEECCCCCCCHHHH----HHHHHHHHHHHCCCC-CEEEE-EECCCCHHHHHHHH Q ss_conf -32456543334-433114478148986304322210233----344544323202466-06776-20255167765322 Q gi|254781097|r 166 -RSSLIKMKDIP-YQSSDLDQPFHLLVFGGSQGAKVFSDI----VPKSIALIPEMQRKR-LVIMQ-QVREDDKEKVQKQY 237 (369) Q Consensus 166 -R~~~~~~~~~~-~~~~~~~~~~~ILv~GGS~Ga~~ln~~----v~~~~~~l~~~~~~~-~~v~~-~~g~~~~~~~~~~~ 237 (369) T Consensus 244 ~R~~-----~~~nFw~~~~~~~pV~li---SLGT-vFn~~p~~fyr~f~~AF~~---~~GW~vV~~~g~~vDp~~----L 307 (429) T TIGR01426 244 DRKE-----DGSNFWAEPEKGRPVVLI---SLGT-VFNAQPSKFYRTFVEAFRD---LPGWHVVLSVGKGVDPAD----L 307 (429) T ss_pred CCCC-----CCCCCCCCCCCCCCEEEE---ECCH-HHCCCHHHHHHHHHHHCCC---CCCCEEEEEECCCCCHHH----H T ss_conf 6777-----865577888888846999---7561-4412447999999986089---987079997267026466----1 Q ss_pred HHCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCC Q ss_conf 10011113454444514443004489972542023334552960487533552489899989999988988998000199 Q gi|254781097|r 238 DELGCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLS 317 (369) Q Consensus 238 ~~~~~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~ 317 (369) T Consensus 308 ~~~P~Nv~VR~~VPq~-evL~~A~lfvTHgGmnSt~EaL~~gVP~va~P~--~ad--Q~~~A~R~~ELGlg~~l~~e~vT 382 (429) T TIGR01426 308 GELPKNVEVRRWVPQL-EVLEKADLFVTHGGMNSTMEALAAGVPLVAVPQ--GAD--QPMTARRIAELGLGRVLPKEEVT 382 (429) T ss_pred CCCCCCEEEECCCCHH-HHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECC--CCC--CHHHHHHHHHCCCEEECCCCCCC T ss_conf 6798877885465627-789888888631660158999964996898517--888--01376575135621113765527 Q ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH Q ss_conf 899999999986189999999999985278327999999999999 Q gi|254781097|r 318 PERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLA 362 (369) Q Consensus 318 ~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~la 362 (369) T Consensus 383 a~~LR~~v~~v~~D~~~~~~~~~~r~~~~eAGG~~rAAdeiE~~l 427 (429) T TIGR01426 383 AEKLREAVLAVLSDDEYLERLKKIRAEIREAGGARRAADEIEGFL 427 (429) T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH T ss_conf 899999999860588899999999999985045338999999974 |
Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. ; GO: 0016758 transferase activity transferring hexosyl groups, 0016999 antibiotic metabolic process. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-26 Score=205.04 Aligned_cols=341 Identities=21% Similarity=0.185 Sum_probs=210.8 Q ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCC-CCCEEEEECCCC-CCCCHHHHHH----HHHH Q ss_conf 876999878852562079999999996598399995723767624446-875168752565-6533123321----1100 Q gi|254781097|r 4 NNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFP-ADSIYEIVSSQV-RFSNPFVFWN----SLVI 77 (369) Q Consensus 4 ~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~----~l~~ 77 (369) T Consensus 1 ~mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~ag~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (406) T COG1819 1 RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAAGLAFVAYPIRDSELATEDGKFAGVKSFRRLLQQ 80 (406) T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCEECCCCCCHHHHHCCHHHHHHHHHHHHHH T ss_conf 95799981776432266699999999769749997377899999983646102446665323320112334548999988 Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEE---------------------ECCCCCCHH-----H Q ss_conf 01211013555420344424312653210247888623411012---------------------215320015-----6 Q gi|254781097|r 78 LWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMV---------------------HEQNVIMGK-----A 131 (369) Q Consensus 78 ~~~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vi---------------------hEqN~v~G~-----~ 131 (369) T Consensus 81 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (406) T COG1819 81 FKKLIRELLELLRELEPDLVVDDARLSLG---LAARLLGIPVVGINVAPYTPLPAAGLPLPPVGIAGKLPIPLYPLPPRL 157 (406) T ss_pred HHHHHHHHHHHHHHHCCHHHCCCCCCHHH---HHHHHCCCCEEEECCHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCHHH T ss_conf 77666889999987461321241000123---565443887888613232344032168653101445665655553323 Q ss_pred HH-------HHHHHHHHHHCCCCC-------------------CCCCC-C----CCCCEEEECCCCHHHHHHHHHHHHHH Q ss_conf 77-------889999987413432-------------------22235-5----66732530444324565433344331 Q gi|254781097|r 132 NR-------LLSWGVQIIARGLVS-------------------SQKKV-L----LRKIIVTGNPIRSSLIKMKDIPYQSS 180 (369) Q Consensus 132 nk-------~l~~~a~~v~~~~~~-------------------~~~~~-~----~~k~~~~G~PvR~~~~~~~~~~~~~~ 180 (369) T Consensus 158 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~----~~~~~~~ 232 (406) T COG1819 158 VRPLIFARSWLPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPGDRLPFIGPYIG-PLLGEA----ANELPYW 232 (406) T ss_pred HCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCC-CCCCCC----CCCCCCC T ss_conf 03000220355656665302456455407777426987642215644576667886636567-757775----3346653 Q ss_pred CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCC Q ss_conf 14478148986304322210233344544323202466067762025516776532210011113454444514443004 Q gi|254781097|r 181 DLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCKATLACFFKDIERYIVEA 260 (369) Q Consensus 181 ~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~v~~f~~~m~~~~~~a 260 (369) T Consensus 233 ~~~d~~~vyvslGt~~~~--~~l~~~~~~a~~~---l~~~vi~~~~~~~~-----~~~~~p~n~~v~~~~p~-~~~l~~a 301 (406) T COG1819 233 IPADRPIVYVSLGTVGNA--VELLAIVLEALAD---LDVRVIVSLGGARD-----TLVNVPDNVIVADYVPQ-LELLPRA 301 (406) T ss_pred CCCCCCEEEEECCCCCCH--HHHHHHHHHHHHC---CCCEEEEECCCCCC-----CCCCCCCCEEEECCCCH-HHHHHCC T ss_conf 137996399955787537--8899999999854---99649997367642-----34688877478615758-9887407 Q ss_pred CEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHH Q ss_conf 48997254202333455296048753355248989998999998898899800019989999999998618999999999 Q gi|254781097|r 261 NLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAK 340 (369) Q Consensus 261 DlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~ 340 (369) T Consensus 302 d~vI~hGG~gtt~eaL~~gvP~vv~P~~----~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~~~~~~ 377 (406) T COG1819 302 DAVIHHGGAGTTSEALYAGVPLVVIPDG----ADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLADDSYRRAAER 377 (406) T ss_pred CEEEECCCHHHHHHHHHCCCCEEEECCC----CCHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHH T ss_conf 9899179857999999739998982787----307879999997498831275658889999999999673999999999 Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 998527832799999999999985553 Q gi|254781097|r 341 QVSMKGKPQAVLMLSDLVEKLAHVKVD 367 (369) Q Consensus 341 ~~~~~~~~~aa~~i~~~i~~la~~k~~ 367 (369) T Consensus 378 ~~~~~~~~~g~~~~a~~le~~~~~~~~ 404 (406) T COG1819 378 LAEEFKEEDGPAKAADLLEEFAREKKK 404 (406) T ss_pred HHHHHHHCCCHHHHHHHHHHHHHCCCC T ss_conf 999976555379999999999832567 |
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.2e-22 Score=172.88 Aligned_cols=349 Identities=16% Similarity=0.180 Sum_probs=223.0 Q ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCH Q ss_conf 87699987885256207999999999659839999572376762444687516875256565331233211100012110 Q gi|254781097|r 4 NNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFI 83 (369) Q Consensus 4 ~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (369) T Consensus 1 ~mkifi~aGE~SGD~~-ga~li~~Lk~~~~~~~~~GiGG~~M~~~G~--~~l~d~--~~l~vmG~~evl~~~~~~~~~~~ 75 (382) T PRK00025 1 PLRIAIVAGEVSGDLL-GAGLIRALKAQAPNLEFVGIGGPRMEAAGF--ESLFDM--EELAVMGLVEVLPRLPRLLKIRK 75 (382) T ss_pred CCEEEEEECCCCHHHH-HHHHHHHHHHHCCCCEEEEECCHHHHHCCC--CCCCCH--HHHHHCCHHHHHHHHHHHHHHHH T ss_conf 9489999068418899-999999998319896799988299997699--544775--78313019999977999999999 Q ss_pred HHHHHHHHCCCCEEEECCCCCCHHHHHHHHH--C--CCCCEEECC-CCC---CHHHHHHHHHHHHHHHCCCCCCCCCCC- Q ss_conf 1355542034442431265321024788862--3--411012215-320---015677889999987413432222355- Q gi|254781097|r 84 ASLRLIKKLKPNVVVGFGGYHSISPLLAGMI--L--RIPSMVHEQ-NVI---MGKANRLLSWGVQIIARGLVSSQKKVL- 154 (369) Q Consensus 84 ~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~--l--~iP~vihEq-N~v---~G~~nk~l~~~a~~v~~~~~~~~~~~~- 154 (369) T Consensus 76 ~~~~~i~~~~Pd~vi~I-D~pgFnlrlak~lkk~~~~ipvi~yv~PqvWAWr~~R~-k~~~~~~D~ll~ifPFE~~~f~~ 153 (382) T PRK00025 76 ELKRLLLAEPPDVFILI-DAPDFNLRLAKKLKKALPGIPIIHYVSPSVWAWRPGRA-KKIAKATDHVLAILPFEAAFYDK 153 (382) T ss_pred HHHHHHHHCCCCEEEEE-CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCHH-HHHHHHHHHHHCCCCCCHHHHHH T ss_conf 99999986499999997-78306599999999716999889994715654064189-99999998761087656899986 Q ss_pred -CCCCEEEECCCCHHHHHHH--HHHHHHHCC-CCCCEEEEEECCCCCCCHHHHHH---HHHHHHHHHCCCCCEEEEEE-C Q ss_conf -6673253044432456543--334433114-47814898630432221023334---45443232024660677620-2 Q gi|254781097|r 155 -LRKIIVTGNPIRSSLIKMK--DIPYQSSDL-DQPFHLLVFGGSQGAKVFSDIVP---KSIALIPEMQRKRLVIMQQV-R 226 (369) Q Consensus 155 -~~k~~~~G~PvR~~~~~~~--~~~~~~~~~-~~~~~ILv~GGS~Ga~~ln~~v~---~~~~~l~~~~~~~~~v~~~~-g 226 (369) T Consensus 154 ~g~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~i~lLPGSR~~EI-~~~lPi~l~a~~~l~~~-~p~~~fvip~~~ 231 (382) T PRK00025 154 LGVPVTYVGHPLADEIPLEPDRAAARAELGLDPDARVLALLPGSRGSEI-KRLLPTFLEAAQLLQQR-YPDLRFVVPLAN 231 (382) T ss_pred CCCCCEECCCCHHHHCCCCCCHHHHHHHCCCCCCCCEEEEECCCCHHHH-HHHHHHHHHHHHHHHHH-CCCEEEEEECCC T ss_conf 5998135698156432235687999987399855661787058858999-99789999999999987-899399995588 Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC Q ss_conf 55167765322100111134544445144430044899725420233345529604875335524898999899999889 Q gi|254781097|r 227 EDDKEKVQKQYDELGCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGG 306 (369) Q Consensus 227 ~~~~~~~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G 306 (369) T Consensus 232 ~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~l~~sd~ai~~SGTaTL-E~al~~~P~Vv~-Yk~~~l--t~~i~k~lvkv~ 307 (382) T PRK00025 232 PKRREQFEQLLAEYAPDLSVTLLDGQAREAMAAADAALAASGTVTL-EAALLGVPMVVG-YKVKPL--TFWIAKRLVKVP 307 (382) T ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCEEEECCCHHHH-HHHHHCCCEEEE-EECCHH--HHHHHHHHHCCC T ss_conf 7789999999984799983898268417788738887653777999-999971985899-807899--999999965699 Q ss_pred CEEE------------EEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 8899------------80001998999999999861899999999999----852783279999999999998555 Q gi|254781097|r 307 GAKV------------ITENFLSPERLAEELCSAMKKPSCLVQMAKQV----SMKGKPQAVLMLSDLVEKLAHVKV 366 (369) Q Consensus 307 ~a~~------------i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~----~~~~~~~aa~~i~~~i~~la~~k~ 366 (369) T Consensus 308 ~isL~Nii~~k~ivPEllQ~~~~~~~i~~~~~~ll~d~~~~~~~~~~~~~lr~~L-~~gas~raA~~Il~~l~~~~ 382 (382) T PRK00025 308 YISLPNLLAGEELVPELLQEEATPEKLARALLELLADGARRQALLEGFTELHQYL-RCGAAERAAQAVLELLKQRK 382 (382) T ss_pred EEEHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHCC T ss_conf 7652487549976613405669999999999999669999999999999999985-78999999999999997369 |
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-21 Score=169.13 Aligned_cols=301 Identities=19% Similarity=0.273 Sum_probs=192.6 Q ss_pred EEEEECCCC--H-HHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCC Q ss_conf 699987885--2-5620799999999965983999957237676244468751687525656533123321110001211 Q gi|254781097|r 6 VILLVAGGT--G-GHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAF 82 (369) Q Consensus 6 ~ili~~gGT--G-GHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (369) T Consensus 3 V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~-----~~~~f~~-------------------~~ 58 (318) T COG3980 3 VLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHK-----VYEGFKV-------------------LE 58 (318) T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH-----HHHHCCC-------------------EE T ss_conf 79992687555751345599999999851746888406625642156-----6651043-------------------00 Q ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHH---HHHCCCCCEEEC-CCCCCHHHHHHHHHHHHHHHCCC-CCCC-CCCCCC Q ss_conf 01355542034442431265321024788---862341101221-53200156778899999874134-3222-235566 Q gi|254781097|r 83 IASLRLIKKLKPNVVVGFGGYHSISPLLA---GMILRIPSMVHE-QNVIMGKANRLLSWGVQIIARGL-VSSQ-KKVLLR 156 (369) Q Consensus 83 ~~~~~ii~~~kPDvVi~tGGy~s~P~~ia---A~~l~iP~vihE-qN~v~G~~nk~l~~~a~~v~~~~-~~~~-~~~~~~ 156 (369) T Consensus 59 ~~~~n~ik~~k~d~lI~D-syg-l~~dd~k~ik~e~~~k~l~fDd~~~~---~~~----d~d~ivN~~~~a~~~y~~v~~ 129 (318) T COG3980 59 GRGNNLIKEEKFDLLIFD-SYG-LNADDFKLIKEEAGSKILIFDDENAK---SFK----DNDLIVNAILNANDYYGLVPN 129 (318) T ss_pred EECCCCCCCCCCCEEEEE-CCC-CCHHHHHHHHHHHCCCEEEECCCCCC---CHH----HHHHHHHHHHCCHHHCCCCCC T ss_conf 233641003667789994-268-88789999889738817996477764---225----667354555351122053676 Q ss_pred CC-EEEE---CCCCHHHHHHHHHHHHHHCCCCCCEEEE-EECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH Q ss_conf 73-2530---4443245654333443311447814898-63043222102333445443232024660677620255167 Q gi|254781097|r 157 KI-IVTG---NPIRSSLIKMKDIPYQSSDLDQPFHLLV-FGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKE 231 (369) Q Consensus 157 k~-~~~G---~PvR~~~~~~~~~~~~~~~~~~~~~ILv-~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~ 231 (369) T Consensus 130 k~~~~lGp~y~~lr~eF~~~r~~~~~r----~~r~ilI~lGGs---Dp-k~lt~kvl~~L~~~~-~nl~iV~gs~~p~l~ 200 (318) T COG3980 130 KTRYYLGPGYAPLRPEFYALREENTER----PKRDILITLGGS---DP-KNLTLKVLAELEQKN-VNLHIVVGSSNPTLK 200 (318) T ss_pred CEEEEECCCCEECCHHHHHHHHHHHHC----CHHEEEEECCCC---CH-HHHHHHHHHHHHCCC-EEEEEEECCCCCCHH T ss_conf 637996587114169999868998635----311289971688---72-445999999840357-049999468885466 Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEE Q ss_conf 76532210011113454444514443004489972542023334552960487533552489899989999988988998 Q gi|254781097|r 232 KVQKQYDELGCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVI 311 (369) Q Consensus 232 ~~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i 311 (369) T Consensus 201 ~l~k~~~~-~~~i~~~~~~~dma~LMke~d~aI~-AaGstlyEa~~lgvP~l~l~~a----~NQ~~~a~~f~~lg~~~~l 274 (318) T COG3980 201 NLRKRAEK-YPNINLYIDTNDMAELMKEADLAIS-AAGSTLYEALLLGVPSLVLPLA----ENQIATAKEFEALGIIKQL 274 (318) T ss_pred HHHHHHHH-CCCEEEEECCHHHHHHHHHCCHHEE-CCCHHHHHHHHHCCCCEEEEEE----CCHHHHHHHHHHCCCHHHC T ss_conf 78888865-7880268622458999986033314-4635799999826982587633----0178887789866860022 Q ss_pred EHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHH Q ss_conf 00019989999999998618999999999998527832799999 Q gi|254781097|r 312 TENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLS 355 (369) Q Consensus 312 ~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~ 355 (369) T Consensus 275 ~~~-l~~~~~~~~~~~i~~d~~~rk~l~~~~~~i~dg~g~~rI~ 317 (318) T COG3980 275 GYH-LKDLAKDYEILQIQKDYARRKNLSFGSKLIGDGRGFLRIA 317 (318) T ss_pred CCC-CCHHHHHHHHHHHHHCHHHHHHHHHCCCEEECCCCCEECC T ss_conf 677-7618789999986407777642221110220350424515 |
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=9e-21 Score=164.75 Aligned_cols=338 Identities=20% Similarity=0.260 Sum_probs=197.0 Q ss_pred CCCCCEEEEECCCC-H-HHHHHHHHHHHHHHHC--CCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHH----- Q ss_conf 99887699987885-2-5620799999999965--9839999572376762444687516875256565331233----- Q gi|254781097|r 1 MSENNVILLVAGGT-G-GHVFPAVALSHELKNR--GYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVF----- 71 (369) Q Consensus 1 M~~~~~ili~~gGT-G-GHi~palala~~L~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 71 (369) T Consensus 6 ~~~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~~gVd~V~LPsl~k~~~G~~~~~d~~~ 85 (400) T COG4671 6 ASKRPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGPAGVDFVKLPSLIKGDNGEYGLVDLDG 85 (400) T ss_pred HHCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCEEECCCCCEEEEECCC T ss_conf 10062578986010130489999999999852556843999958975688977456756854845745887334445688 Q ss_pred -HHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHH-------HHHHC--CCCCEE---------ECCCCCCHHHH Q ss_conf -211100012110135554203444243126532102478-------88623--411012---------21532001567 Q gi|254781097|r 72 -WNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLL-------AGMIL--RIPSMV---------HEQNVIMGKAN 132 (369) Q Consensus 72 -~~~l~~~~~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~i-------aA~~l--~iP~vi---------hEqN~v~G~~n 132 (369) T Consensus 86 ~l~e~~~~Rs~li--l~t~~~fkPDi~IVd----~~P~Glr~EL~ptL~yl~~~~t~~vL~lr~i~D~p~~~-~~~w~~~ 158 (400) T COG4671 86 DLEETKKLRSQLI--LSTAETFKPDIFIVD----KFPFGLRFELLPTLEYLKTTGTRLVLGLRSIRDIPQEL-EADWRRA 158 (400) T ss_pred CHHHHHHHHHHHH--HHHHHHCCCCEEEEE----CCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHCHHHH-CCCHHHH T ss_conf 8999999999999--999983299789993----55541365466799998605986255447655254441-3514456 Q ss_pred ---HHHHHHHHHHHC-CCCCCC------C--CCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEE-ECCC-CCC Q ss_conf ---788999998741-343222------2--3556673253044432456543334433114478148986-3043-222 Q gi|254781097|r 133 ---RLLSWGVQIIAR-GLVSSQ------K--KVLLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVF-GGSQ-GAK 198 (369) Q Consensus 133 ---k~l~~~a~~v~~-~~~~~~------~--~~~~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~-GGS~-Ga~ 198 (369) T Consensus 159 ~~~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~v-q~~~-~~~~~p~~~--~pE~~~Ilvs~GGG~dG~e 234 (400) T COG4671 159 ETVRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFV-QRSL-PHLPLPPHE--APEGFDILVSVGGGADGAE 234 (400) T ss_pred HHHHHHHHHHEEEEEECCCCCCCHHHCCCCCHHHHHHEEEEEEE-ECCC-CCCCCCCCC--CCCCCEEEEECCCCHHHHH T ss_conf 79999987540799946954157322278607656326676776-1367-678898767--8763339995488720599 Q ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH-HHCC--CCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHH Q ss_conf 102333445443232024660677620255167765322-1001--1113454444514443004489972542023334 Q gi|254781097|r 199 VFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQY-DELG--CKATLACFFKDIERYIVEANLLICRSGALTVSEI 275 (369) Q Consensus 199 ~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~-~~~~--~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~ 275 (369) T Consensus 235 Li-~~~l~A~~~l~~l~~-~~~i--vtGP~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~vVSm~GYNTvCeI 310 (400) T COG4671 235 LI-ETALAAAQLLAGLNH-KWLI--VTGPFMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARLVVSMGGYNTVCEI 310 (400) T ss_pred HH-HHHHHHHHHCCCCCC-CEEE--EECCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHEEEECCCCHHHHHH T ss_conf 99-999987550778874-3389--8489998899999987425699728997330399998764403520462226688 Q ss_pred HHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHH Q ss_conf 55296048753355248989998999998898899800019989999999998618999999999998527832799999 Q gi|254781097|r 276 AVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLS 355 (369) Q Consensus 276 ~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~ 355 (369) T Consensus 311 Ls~~k~aLivPr~~p~-eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P~~-------~~~~L~L~G~~~~a 382 (400) T COG4671 311 LSFGKPALIVPRAAPR-EEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARPSP-------SKPHLDLEGLEHIA 382 (400) T ss_pred HHCCCCEEEECCCCCC-HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCC-------CCCCCCCHHHHHHH T ss_conf 7379955984367873-899999999986695103073558968999999854268998-------76663734567689 Q ss_pred HHHHHH Q ss_conf 999999 Q gi|254781097|r 356 DLVEKL 361 (369) Q Consensus 356 ~~i~~l 361 (369) T Consensus 383 ~~l~e~ 388 (400) T COG4671 383 RILAEL 388 (400) T ss_pred HHHHHH T ss_conf 999998 |
|
| >pfam02684 LpxB Lipid-A-disaccharide synthetase | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-19 Score=153.52 Aligned_cols=337 Identities=14% Similarity=0.118 Sum_probs=207.4 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHH Q ss_conf 99987885256207999999999659839999572376762444687516875256565331233211100012110135 Q gi|254781097|r 7 ILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASL 86 (369) Q Consensus 7 ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 86 (369) T Consensus 1 Ifi~aGE~SGD~~-ga~Li~~Lk~~~p~i~~~GvGG~~M~~~G~--~~l~d~~~--lsvmG~~evl~~l~~l~~~~~~~~ 75 (373) T pfam02684 1 IFLSAGEASGDIL-GGELIQNLKEHYPNLRFIGVGGPKMEAEGF--ESLANMEE--ISVMGFIEVLGRLFKLLKIYQKVV 75 (373) T ss_pred CEEEECCCCHHHH-HHHHHHHHHHCCCCCEEEEECCHHHHHCCC--CCCCCHHH--HHHCCHHHHHHHHHHHHHHHHHHH T ss_conf 9899358518999-999999998309894899988089997799--53477278--414019999989999999999999 Q ss_pred HHHHHCCCCEEEECCCCCCHHHHHHHHH--C--CCCCEEECC-CC---CCHHHHHHHHHHHHHHHCCCCCCCCCCC--CC Q ss_conf 5542034442431265321024788862--3--411012215-32---0015677889999987413432222355--66 Q gi|254781097|r 87 RLIKKLKPNVVVGFGGYHSISPLLAGMI--L--RIPSMVHEQ-NV---IMGKANRLLSWGVQIIARGLVSSQKKVL--LR 156 (369) Q Consensus 87 ~ii~~~kPDvVi~tGGy~s~P~~iaA~~--l--~iP~vihEq-N~---v~G~~nk~l~~~a~~v~~~~~~~~~~~~--~~ 156 (369) T Consensus 76 ~~i~~~~PD~vIlI-D~pgFNlrlak~lkk~g~~ipvi~yV~PqvWAWr~~R~-k~i~~~~D~ll~IfPFE~~~y~~~gv 153 (373) T pfam02684 76 KNILKKKPDTLILI-DAPDFNLRLAKKLRKLGPKLKIIHYVSPSVWAWRPKRA-KIIAKYTDLLLAILPFEKGFFQKFGL 153 (373) T ss_pred HHHHHCCCCEEEEE-CCCCHHHHHHHHHHHCCCCCCEEEEECCCEEEECHHHH-HHHHHHHHHHCCCCCCCHHHHHHHCC T ss_conf 98742699889997-17615599999999719998789996884221271589-99999998731289887899986099 Q ss_pred CCEEEECCCCHHHHHHHHH--HHHHHCCCCCCEEEEEECCCCCCCHHHH---HHHHHHHHHHHCCCCCEEEEEECCCCH- Q ss_conf 7325304443245654333--4433114478148986304322210233---344544323202466067762025516- Q gi|254781097|r 157 KIIVTGNPIRSSLIKMKDI--PYQSSDLDQPFHLLVFGGSQGAKVFSDI---VPKSIALIPEMQRKRLVIMQQVREDDK- 230 (369) Q Consensus 157 k~~~~G~PvR~~~~~~~~~--~~~~~~~~~~~~ILv~GGS~Ga~~ln~~---v~~~~~~l~~~~~~~~~v~~~~g~~~~- 230 (369) T Consensus 154 ~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~i~lLPGSR~~E-I~~~lPi~l~aa~~l~~~-~~~~~~~ip~~~~~~~ 231 (373) T pfam02684 154 DCRYVGHPLLDEIKLYKKRASAKELLIDHDEPILALLPGSRKGE-IRRLLPPIQVAAQQLSSQ-FPNLKLLVPLVNKKYE 231 (373) T ss_pred CEEECCCCHHHHHCCCCCHHHHHHHCCCCCCCEEEECCCCCHHH-HHHHHHHHHHHHHHHHHH-CCCCEEEEECCCHHHH T ss_conf 71575981165401377658999746898775577678886999-999999999999999976-8991899965887899 Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEE Q ss_conf 77653221001111345444451444300448997254202333455296048753355248989998999998898899 Q gi|254781097|r 231 EKVQKQYDELGCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKV 310 (369) Q Consensus 231 ~~~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~ 310 (369) T Consensus 232 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~sd~al~~SGTaTL-E~al~~~P~vV~-Yk~~~l--ty~i~k~lvkv~~isL 307 (373) T pfam02684 232 EQIEDTLALENCDVSLLEISGERYEAMFAADAALAKSGTATL-EAALAGTPMVVA-YRVKPL--TFFLAKRLVKIDYISL 307 (373) T ss_pred HHHHHHHHHCCCCCCEEECCCCHHHHHHHCCEEEECCCHHHH-HHHHCCCCEEEE-EECCHH--HHHHHHHHHCCCEEEH T ss_conf 999999986499987898057249999848650121676999-999819998999-957789--9999999983895443 Q ss_pred ------------EEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC------CCCHHHHHHHH Q ss_conf ------------80001998999999999861899999999999852------78327999999 Q gi|254781097|r 311 ------------ITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMK------GKPQAVLMLSD 356 (369) Q Consensus 311 ------------i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~------~~~~aa~~i~~ 356 (369) T Consensus 308 ~Nii~~k~ivPEllQ~~~t~~~ia~~~~~lL~d~~~~~~~~~~~~~~~~~l~~g~~~~~~~aa~ 371 (373) T pfam02684 308 PNIILNREIVPEFIQGECDAHLEAIALLLLLLNGLKAKKQKDRCRKFKQLLRFGQCNSDEQAAL 371 (373) T ss_pred HHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH T ss_conf 4886699867356475178999999999996799999999999999999985689998897775 |
This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyse the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <= UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyse the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| >PRK10307 predicted glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-18 Score=147.11 Aligned_cols=343 Identities=14% Similarity=0.105 Sum_probs=187.2 Q ss_pred EEEEEC-------CCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH-------HHH------HCCCCCCCEEEEECCCCCC Q ss_conf 699987-------88525620799999999965983999957237-------676------2444687516875256565 Q gi|254781097|r 6 VILLVA-------GGTGGHVFPAVALSHELKNRGYAVYLITDRRA-------RSF------ITDFPADSIYEIVSSQVRF 65 (369) Q Consensus 6 ~ili~~-------gGTGGHi~palala~~L~~~g~~v~~~~~~~~-------~~~------~~~~~~~~~~~~~~~~~~~ 65 (369) T Consensus 2 rIl~vs~~y~P~~~G~~~~---~~~La~~L~~~GheV~Vit~~p~~p~~~~~~~~~~~~~~~e~~~gv~v~R~p~~~~~~ 78 (415) T PRK10307 2 KILVYGINYAPELTGIGKY---TGEMAEWLAARGHEVRVITAPPYYPQWQVGEGYSAWRYRREERGGVTVWRCPLYVPKQ 78 (415) T ss_pred EEEEECCCCCCCCCCHHHH---HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCC T ss_conf 8999858489978879999---9999999997899899997799887665577766654311367888999830456788 Q ss_pred CCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCC-CCCH-HHHHHHHHCCCCCEEECCCCCC--------------H Q ss_conf 3312332111000121101355542034442431265-3210-2478886234110122153200--------------1 Q gi|254781097|r 66 SNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVGFGG-YHSI-SPLLAGMILRIPSMVHEQNVIM--------------G 129 (369) Q Consensus 66 ~~~~~~~~~l~~~~~~~~~~~~ii~~~kPDvVi~tGG-y~s~-P~~iaA~~l~iP~vihEqN~v~--------------G 129 (369) T Consensus 79 ~~~~~r~~~~~~f~~~~~~~~~~~~~~~pD~v~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~g~l~~~~~~ 158 (415) T PRK10307 79 PSGLKRLLHLGSFALSSFPPLMAQRRWRPDRVIGVAPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLGKGKGG 158 (415) T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHCCCCCCCCH T ss_conf 40899999999999999999999847699989992877889999999999629888999900211456651401124456 Q ss_pred HHHHHH-------HHHHHHHHCCCCCCC-----CCCCCCCCEEEECCCCHHHHHHHH-----HHHHHHCCCCCCEEEEEE Q ss_conf 567788-------999998741343222-----235566732530444324565433-----344331144781489863 Q gi|254781097|r 130 KANRLL-------SWGVQIIARGLVSSQ-----KKVLLRKIIVTGNPIRSSLIKMKD-----IPYQSSDLDQPFHLLVFG 192 (369) Q Consensus 130 ~~nk~l-------~~~a~~v~~~~~~~~-----~~~~~~k~~~~G~PvR~~~~~~~~-----~~~~~~~~~~~~~ILv~G 192 (369) T Consensus 159 ~~~~~~~~~e~~~~~~ad~v~~~S~~~~~~l~~~g~~~~ki~vipNgvd~~~f~p~~~~~~~~~r~~~g~~~~~~vvly~ 238 (415) T PRK10307 159 KVARLATAFERSLLRRFDNVSTISRSMMNKAREKGVAAEKVIFFPNWSDVARFQDVADADVDALRAQLGLPDGKKIVLYS 238 (415) T ss_pred HHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEE T ss_conf 99999999999999858989977999999999828998709997681510003787852068999970999998799994 Q ss_pred CCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCC-CCCCCCCC--CCCHHHHHCCCEEE--EC Q ss_conf 04322-210233344544323202466067762025516776532210011-11345444--45144430044899--72 Q gi|254781097|r 193 GSQGA-KVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGC-KATLACFF--KDIERYIVEANLLI--CR 266 (369) Q Consensus 193 GS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~-~~~v~~f~--~~m~~~~~~aDlvI--sr 266 (369) T Consensus 239 Grl~~~kg~-~~li~A~~~l~~~--~~~~lvivG~G~~~~~L~~~a~~~gl~~V~f~g~~~~e~l~~~~~~aDv~v~ps~ 315 (415) T PRK10307 239 GNIGEKQGL-ELVIDAAARLRDR--PDLIFVICGQGGGKARLEKMARCRGLRNVHFLPLQPYDALPALLKMADCHLLPQK 315 (415) T ss_pred CCCHHHCCH-HHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCEEEEECC T ss_conf 776011187-9999999983128--9869999688740899999999709983898188788999999984749997044 Q ss_pred CCC------HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH-HCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHH Q ss_conf 542------0233345529604875335524898999899999-889889980001998999999999861899999999 Q gi|254781097|r 267 SGA------LTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQ-EGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMA 339 (369) Q Consensus 267 aG~------~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~-~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~ 339 (369) T Consensus 316 ~e~~~~v~Pskl~~~mA~G~PVva~~~~g~~~------~~~v~~~~~~G~~v~p~d--~~~La~ai~~ll~d~~~~~~mg 387 (415) T PRK10307 316 AGAADLVLPSKLTNMLASGRNVVATAEPGTEL------GQLCETFPGIGVCVPPED--VEALVAAIRQLLALPKRRTALG 387 (415) T ss_pred CCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC------CHHEEEECCEEEEECCCC--HHHHHHHHHHHHCCHHHHHHHH T ss_conf 11123457579999986699689992588765------201276278089978999--9999999999977999999999 Q ss_pred HHHHHCCCCH-HHHHHHHHHHHHH Q ss_conf 9998527832-7999999999999 Q gi|254781097|r 340 KQVSMKGKPQ-AVLMLSDLVEKLA 362 (369) Q Consensus 340 ~~~~~~~~~~-aa~~i~~~i~~la 362 (369) T Consensus 388 ~~gr~~~~~~f~~e~~~~~~~~~~ 411 (415) T PRK10307 388 AAAREYAERTLDRENVLRQFIADI 411 (415) T ss_pred HHHHHHHHHHCCHHHHHHHHHHHH T ss_conf 999999999779999999999999 |
|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=7e-19 Score=151.51 Aligned_cols=329 Identities=15% Similarity=0.134 Sum_probs=191.3 Q ss_pred EEEEECC----CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC Q ss_conf 6999878----852562079999999996598399995723767624446875168752565653312332111000121 Q gi|254781097|r 6 VILLVAG----GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKA 81 (369) Q Consensus 6 ~ili~~g----GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (369) T Consensus 1 kIl~i~~~f~P~~GG~e~~~~~la~~L~~~Gh~V~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~ 71 (364) T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEG---PARVVPVPSVPLPGYPEI------RLALPP 71 (364) T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC---CCCEEEEEEEECCCCCCC------EECCCH T ss_conf 98999388899988499999999999997799899997899765555---663467866746888763------002032 Q ss_pred CHHHHHHHHHCCCCEEEECC-CCCCHHHHHHHHHCCCCCEE--ECC------CCCCHH----HH---HHHHHHHHHHHCC Q ss_conf 10135554203444243126-53210247888623411012--215------320015----67---7889999987413 Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFG-GYHSISPLLAGMILRIPSMV--HEQ------NVIMGK----AN---RLLSWGVQIIARG 145 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tG-Gy~s~P~~iaA~~l~iP~vi--hEq------N~v~G~----~n---k~l~~~a~~v~~~ 145 (369) T Consensus 72 ~~~~~~~~~~~~pDiIh~~~~~~~~~~a~~~~~~~~ip~i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~ 151 (364) T cd03814 72 RRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVP 151 (364) T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEC T ss_conf 99999999865999999878416789999999975997899974764888776032056899999999998507999989 Q ss_pred CCCC---CCCCCCCCCEEEECCCCHHHHHHHH--HH-HHHHCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCC Q ss_conf 4322---2235566732530444324565433--34-433114478148986304322-210233344544323202466 Q gi|254781097|r 146 LVSS---QKKVLLRKIIVTGNPIRSSLIKMKD--IP-YQSSDLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKR 218 (369) Q Consensus 146 ~~~~---~~~~~~~k~~~~G~PvR~~~~~~~~--~~-~~~~~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~ 218 (369) T Consensus 152 S~~~~~~~~~~~~~~~~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~i-~~vGrl~~~Kg~~-~ll~a~~~l~~~--~~ 227 (364) T cd03814 152 SPSLADELRARGFRRVRLWPRGVDTELFHPRRRDEALRARLGPPDRPVL-LYVGRLAPEKNLE-ALLDADLPLRRR--PP 227 (364) T ss_pred CHHHHHHHHHHCCCCEEEECCCCCHHHCCCCCCCHHHHHHCCCCCCCEE-EEEECCCCCCCHH-HHHHHHHHHHCC--CC T ss_conf 9999999985099888996896169884875432666530268998389-9964575557899-999999973005--88 Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC--CCHHHHHCCCEEEECCC----CHHHHHHHHHCCCEEEEECCCCCC Q ss_conf 067762025516776532210011113454444--51444300448997254----202333455296048753355248 Q gi|254781097|r 219 LVIMQQVREDDKEKVQKQYDELGCKATLACFFK--DIERYIVEANLLICRSG----ALTVSEIAVIGRPAILVPYPHSVD 292 (369) Q Consensus 219 ~~v~~~~g~~~~~~~~~~~~~~~~~~~v~~f~~--~m~~~~~~aDlvIsraG----~~Ti~E~~~~g~P~IlIP~p~a~~ 292 (369) T Consensus 228 ~~l~ivG~G~~~~~l~~----~~~~v~f~G~~~~~el~~~~~~adi~v~pS~~E~fg~~~lEAma~G~PvI~s~~g---- 299 (364) T cd03814 228 VRLVIVGDGPARARLEA----RYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAG---- 299 (364) T ss_pred EEEEEECCCCCHHHHHH----CCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCC---- T ss_conf 59999847633999985----1898799078998999999982475678865345765799999839989995899---- Q ss_pred CHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH Q ss_conf 989998999998898899800019989999999998618999999999998527832799999999999 Q gi|254781097|r 293 QDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKL 361 (369) Q Consensus 293 ~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~l 361 (369) T Consensus 300 ----g~~Eiv~~~~~G~l~~~~--d~~~la~~i~~l~~~~~~~~~mg~~ar~~~~~~~w~~~~~~~~~~ 362 (364) T cd03814 300 ----GPADIVTDGENGLLVEPG--DAEAFAAALAALLADPELRRRMAARARAEAERRSWEAFLDNLLEA 362 (364) T ss_pred ----CHHHHHCCCCCEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH T ss_conf ----748883179828997999--999999999999769999999999999999968999999999997 |
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.4e-19 Score=154.75 Aligned_cols=329 Identities=15% Similarity=0.174 Sum_probs=181.6 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHH Q ss_conf 69998788525620799999999965983999957237676244468751687525656533123321110001211013 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIAS 85 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 85 (369) T Consensus 1 kil~i~~~~GG~e~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~gv~~~~~~~~~-~~~~~~~-------~~~~~~~l 72 (359) T cd03808 1 KILHIVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEALGVKVIPIPLDR-RGINPFK-------DLKALLRL 72 (359) T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCEEEEECCCC-CCCCHHH-------HHHHHHHH T ss_conf 989997587659999999999999769999999707987433675798899927877-7788699-------99999999 Q ss_pred HHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCC------CCHHHH-------HHHHHHHHHHHCCCCCCCC- Q ss_conf 55542034442431265321024788862341101221532------001567-------7889999987413432222- Q gi|254781097|r 86 LRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNV------IMGKAN-------RLLSWGVQIIARGLVSSQK- 151 (369) Q Consensus 86 ~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~------v~G~~n-------k~l~~~a~~v~~~~~~~~~- 151 (369) T Consensus 73 ~~~i~~~~pDvIh~~~~~~~~~~~la~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ii~~S~~~~~~ 152 (359) T cd03808 73 YRLLRKERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDL 152 (359) T ss_pred HHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHH T ss_conf 99999849989999065135789999986499869999567740124547789999999999996499999949899999 Q ss_pred ----C-CCCC-CCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEE Q ss_conf ----3-5566-73253044432456543334433114478148986304322-210233344544323202466067762 Q gi|254781097|r 152 ----K-VLLR-KIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLVIMQQ 224 (369) Q Consensus 152 ----~-~~~~-k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v~~~ 224 (369) T Consensus 153 ~~~~~~~~~~~~~~i~~~gvd~~~~~~~----~~~~~~~~~-~i~~vGrl~~~Kg~~-~li~a~~~l~~~~-~~~~l~iv 225 (359) T cd03808 153 ALKLGIIKKKKTVLIPGSGVDLDRFSPS----PEPIPEDDP-VFLFVARLLKDKGID-ELLEAARILKAKG-PNVRLLLV 225 (359) T ss_pred HHHHCCCCCCCEEEECCCCCCHHHCCCC----CCCCCCCCE-EEEEECCCCHHCCHH-HHHHHHHHHHHHC-CCCEEEEE T ss_conf 9983799746089977997686653866----546898984-999980463220739-9999999998639-98089997 Q ss_pred ECCCCHHHHH-HHHH--HCCCCCCCCCCCCCCHHHHHCCCEEEECC----CCHHHHHHHHHCCCEEEEECCCCCCCHHHH Q ss_conf 0255167765-3221--00111134544445144430044899725----420233345529604875335524898999 Q gi|254781097|r 225 VREDDKEKVQ-KQYD--ELGCKATLACFFKDIERYIVEANLLICRS----GALTVSEIAVIGRPAILVPYPHSVDQDQLH 297 (369) Q Consensus 225 ~g~~~~~~~~-~~~~--~~~~~~~v~~f~~~m~~~~~~aDlvIsra----G~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~ 297 (369) T Consensus 226 G~g~~~~~~~~~~~~~~~~~~~v~f~G~~~~~~~~~~~~di~v~pS~~Egf~~~~lEAma~G~PvI~s~~g----g---- 297 (359) T cd03808 226 GDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVP----G---- 297 (359) T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCC----C---- T ss_conf 68872589999999971889869980757789999996021578752135784289998669989994899----7---- Q ss_pred HHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC-CCHHHHHHHHHHH Q ss_conf 8999998898899800019989999999998618999999999998527-8327999999999 Q gi|254781097|r 298 NAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKG-KPQAVLMLSDLVE 359 (369) Q Consensus 298 NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~-~~~aa~~i~~~i~ 359 (369) T Consensus 298 ~~e~i~~~~~G~l~~~~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~l 358 (359) T cd03808 298 CREAVIDGVNGFLVPPG--DAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359) T ss_pred HHHHHHCCCCEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH T ss_conf 28886079818998999--99999999999988999999999999999998779999999974 |
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.6e-18 Score=146.57 Aligned_cols=338 Identities=17% Similarity=0.216 Sum_probs=180.6 Q ss_pred EEEEECC----CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHH--------CCCCCCCEEEEECCCCCCCCHHHHHH Q ss_conf 6999878----85256207999999999659839999572376762--------44468751687525656533123321 Q gi|254781097|r 6 VILLVAG----GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFI--------TDFPADSIYEIVSSQVRFSNPFVFWN 73 (369) Q Consensus 6 ~ili~~g----GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (369) T Consensus 1 KIlii~~~fpP~~gG~~~~~~~la~~L~~~Gh~V~v~t~~~~~~~~~~~~~~~~~~~~gi~v~r~~~~~~~~~~~~~~~~ 80 (394) T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYKKNGLLKRLL 80 (394) T ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCCCHHHHHH T ss_conf 98999177789898299999999999997799799995478776432356664466488599993377667752788999 Q ss_pred HHHHCCCCCHHHHHHHHHCCCCEEEECCCC--CCHHHHHHHHHCCCCCEEECCCCCC------H------HHHHHH---- Q ss_conf 110001211013555420344424312653--2102478886234110122153200------1------567788---- Q gi|254781097|r 74 SLVILWKAFIASLRLIKKLKPNVVVGFGGY--HSISPLLAGMILRIPSMVHEQNVIM------G------KANRLL---- 135 (369) Q Consensus 74 ~l~~~~~~~~~~~~ii~~~kPDvVi~tGGy--~s~P~~iaA~~l~iP~vihEqN~v~------G------~~nk~l---- 135 (369) T Consensus 81 ~~~~~~~~~~-~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~p~v~~~hd~~p~~~~~~~~~~~~~~~~~~~~~~~ 159 (394) T cd03794 81 NYLSFALSAL-LALLKRRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLE 159 (394) T ss_pred HHHHHHHHHH-HHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHH T ss_conf 9999999999-999985589988999178478899999999863996999968744678998367444448999999999 Q ss_pred ---HHHHHHHHCCCCCCC-----CCCCCCCCEEEECCCCHHHHHHHH--HHHHHH-CCCCCCEEEEEECCCCC-CCHHHH Q ss_conf ---999998741343222-----235566732530444324565433--344331-14478148986304322-210233 Q gi|254781097|r 136 ---SWGVQIIARGLVSSQ-----KKVLLRKIIVTGNPIRSSLIKMKD--IPYQSS-DLDQPFHLLVFGGSQGA-KVFSDI 203 (369) Q Consensus 136 ---~~~a~~v~~~~~~~~-----~~~~~~k~~~~G~PvR~~~~~~~~--~~~~~~-~~~~~~~ILv~GGS~Ga-~~ln~~ 203 (369) T Consensus 160 ~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~vipngvd~~~~~~~~~~~~~~~~~~~~~~~-~i~~~Grl~~~kg~-~~ 237 (394) T cd03794 160 RLIYRRADAIVVISPGMREYLVRRGVPPEKISVIPNGVDLELFKPPPADESLRKELGLDDKF-VVLYAGNIGRAQGL-DT 237 (394) T ss_pred HHHHHHCCEEEECCHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCCHHHHHHHCCCCCCE-EEEEEEECCCCCCC-HH T ss_conf 99998489999772999999998489923099994762576527775047778742689985-99996111000363-79 Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCC-CCCCCCCCC--CCCHHHHHCCCEEEEC-----CCCHH---- Q ss_conf 34454432320246606776202551677653221001-111345444--4514443004489972-----54202---- Q gi|254781097|r 204 VPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELG-CKATLACFF--KDIERYIVEANLLICR-----SGALT---- 271 (369) Q Consensus 204 v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~-~~~~v~~f~--~~m~~~~~~aDlvIsr-----aG~~T---- 271 (369) T Consensus 238 li~a~~~l~~~--~~~~l~ivG~G~~~~~l~~~~~~~~~~~V~~~G~v~~~~~~~~~~~adi~v~p~~~~~~~~~~~P~k 315 (394) T cd03794 238 LLEAAALLKDR--PDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSK 315 (394) T ss_pred HHHHHHHHCCC--CCEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCHHH T ss_conf 99999974558--9859999568516789999999819994998163046136778742969999277754457735689 Q ss_pred HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC-HH Q ss_conf 33345529604875335524898999899999889889980001998999999999861899999999999852783-27 Q gi|254781097|r 272 VSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKP-QA 350 (369) Q Consensus 272 i~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~-~a 350 (369) T Consensus 316 llEAma~G~PVV~s~~----g----g~~e~i~~~~~G~l~~~~--d~~~la~~i~~ll~d~~~~~~~~~~ar~~~~~~fs 385 (394) T cd03794 316 LFEYMAAGKPVLASVD----G----ESAELVEEAGAGLVVPPG--DPEALAAAILELLDDPEERAEMGENGRRYVEEKFS 385 (394) T ss_pred HHHHHHCCCCEEEECC----C----CHHHHEECCCEEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC T ss_conf 9999984997999589----9----807761218808997799--99999999999977999999999999999998589 Q ss_pred HHHHHHHH Q ss_conf 99999999 Q gi|254781097|r 351 VLMLSDLV 358 (369) Q Consensus 351 a~~i~~~i 358 (369) T Consensus 386 w~~~a~~~ 393 (394) T cd03794 386 REKLAERL 393 (394) T ss_pred HHHHHHHH T ss_conf 99999831 |
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.2e-18 Score=143.68 Aligned_cols=336 Identities=16% Similarity=0.157 Sum_probs=190.2 Q ss_pred EEEEECC----CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC Q ss_conf 6999878----852562079999999996598399995723767624446875168752565653312332111000121 Q gi|254781097|r 6 VILLVAG----GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKA 81 (369) Q Consensus 6 ~ili~~g----GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (369) T Consensus 1 kIlii~~~~~P~~GG~e~~~~~la~~L~~~G~~V~vit~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~~----~~~~~~ 73 (374) T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGI-VVVRPPPLLR-V-RRL----LLLLLL 73 (374) T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCC-EEEECCCCCC-C-CHH----HHHHHH T ss_conf 98999487799988199999999999997799899996079887503423771-6995676654-2-002----456789 Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCH-------HHH-------HHHHHHHHHHHCCCC Q ss_conf 101355542034442431265321024788862341101221532001-------567-------788999998741343 Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVIMG-------KAN-------RLLSWGVQIIARGLV 147 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~v~G-------~~n-------k~l~~~a~~v~~~~~ 147 (369) T Consensus 74 ~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~ 153 (374) T cd03801 74 ALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSE 153 (374) T ss_pred HHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCH T ss_conf 99999999855998999788317899999998669978999678621002210025689999999999983899999899 Q ss_pred CCCC------CCCCCCCEEEECCCCHHHHHHHHHH-HHHHC-CCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCC Q ss_conf 2222------3556673253044432456543334-43311-4478148986304322-210233344544323202466 Q gi|254781097|r 148 SSQK------KVLLRKIIVTGNPIRSSLIKMKDIP-YQSSD-LDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKR 218 (369) Q Consensus 148 ~~~~------~~~~~k~~~~G~PvR~~~~~~~~~~-~~~~~-~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~ 218 (369) T Consensus 154 ~~~~~l~~~~~~~~~ki~vI~ngid~~~~~~~~~~~~~~~~~~~~~~~il~v-Grl~~~Kg~~-~li~a~~~l~~~~-~~ 230 (374) T cd03801 154 ATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGIPEDEPVILFV-GRLVPRKGVD-LLLEALAKLRKEY-PD 230 (374) T ss_pred HHHHHHHHHCCCCHHHEEEECCCCCHHHCCCCCHHHHHHHCCCCCCEEEEEE-EECCCCCCCH-HHHHHHHHHHHHC-CC T ss_conf 9999999861998568999889767554175417789871899998299999-5332002835-7899999998528-87 Q ss_pred CEEEEEECCCCHHHHHHHHHHC--CCCCCCCCCC--CCCHHHHHCCCEEEEC----CCCHHHHHHHHHCCCEEEEECCCC Q ss_conf 0677620255167765322100--1111345444--4514443004489972----542023334552960487533552 Q gi|254781097|r 219 LVIMQQVREDDKEKVQKQYDEL--GCKATLACFF--KDIERYIVEANLLICR----SGALTVSEIAVIGRPAILVPYPHS 290 (369) Q Consensus 219 ~~v~~~~g~~~~~~~~~~~~~~--~~~~~v~~f~--~~m~~~~~~aDlvIsr----aG~~Ti~E~~~~g~P~IlIP~p~a 290 (369) T Consensus 231 ~~l~ivG~g~~~~~~~~~~~~~~l~~~v~f~g~v~~~~~~~~~~~adi~v~pS~~E~~~~~~lEAma~G~PvI~t~~g-- 308 (374) T cd03801 231 VRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVG-- 308 (374) T ss_pred EEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCC-- T ss_conf 299995688136699999997399855997586421137788765403658735543215899999769989997899-- Q ss_pred CCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHH Q ss_conf 48989998999998898899800019989999999998618999999999998527-832799999999999 Q gi|254781097|r 291 VDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKG-KPQAVLMLSDLVEKL 361 (369) Q Consensus 291 ~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~-~~~aa~~i~~~i~~l 361 (369) T Consensus 309 --g----~~e~i~~~~~G~l~~~~--d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 372 (374) T cd03801 309 --G----IPEVVEDGETGLLVPPG--DPEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTEEV 372 (374) T ss_pred --C----HHHHHCCCCEEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH T ss_conf --7----58885189718997899--9999999999997799999999999999999868999999999976 |
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-17 Score=142.51 Aligned_cols=318 Identities=20% Similarity=0.198 Sum_probs=178.1 Q ss_pred EEEEECC--CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCH Q ss_conf 6999878--85256207999999999659839999572376762444687516875256565331233211100012110 Q gi|254781097|r 6 VILLVAG--GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFI 83 (369) Q Consensus 6 ~ili~~g--GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (369) T Consensus 1 KIl~v~~~~~~GG~e~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~-------~~~~~~ 71 (353) T cd03811 1 KILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLP-SNVKLIPVRVLKL-KSLR-------DLLAIL 71 (353) T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCC-CCCEEEEECCCCC-CCHH-------HHHHHH T ss_conf 989996999991599999999999997799799999779985133305-6733886135565-5332-------599999 Q ss_pred HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCH---------HHHHHHHHHHHHHHCCCCCC----C Q ss_conf 1355542034442431265321024788862341101221532001---------56778899999874134322----2 Q gi|254781097|r 84 ASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVIMG---------KANRLLSWGVQIIARGLVSS----Q 150 (369) Q Consensus 84 ~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~v~G---------~~nk~l~~~a~~v~~~~~~~----~ 150 (369) T Consensus 72 ~l~~~i~~~~~DiI~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~ 151 (353) T cd03811 72 RLRRLLRKEKPDVVISHLTTTPNVLALLAARLGTKLIVWEHNSLSLELKRKLRLLLLIRKLYRRADKIVAVSEGVKEDLL 151 (353) T ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHH T ss_conf 99999997499899998862789999999747997899979870443233466999999999868999995999999999 Q ss_pred C--CCCCCCCEEEECCCCHHHHHHHHHHHHHHCC-CCCCEEEEEECCCC-CCCHHHHHHHHHHHHHHHCCCCCEEEEEEC Q ss_conf 2--3556673253044432456543334433114-47814898630432-221023334454432320246606776202 Q gi|254781097|r 151 K--KVLLRKIIVTGNPIRSSLIKMKDIPYQSSDL-DQPFHLLVFGGSQG-AKVFSDIVPKSIALIPEMQRKRLVIMQQVR 226 (369) Q Consensus 151 ~--~~~~~k~~~~G~PvR~~~~~~~~~~~~~~~~-~~~~~ILv~GGS~G-a~~ln~~v~~~~~~l~~~~~~~~~v~~~~g 226 (369) T Consensus 152 ~~~~~~~~~i~vI~Ngvd~~~~~~~~~~~~~~~~~~~~~~il~v-Grl~~~Kg~-~~li~a~~~l~~~-~~~~~l~ivG~ 228 (353) T cd03811 152 KLLGIPPDKIEVIYNPIDIEEIRALAEEPLELGIPPDGPVILAV-GRLSPQKGF-DTLIRAFALLRKE-GPDARLVILGD 228 (353) T ss_pred HHCCCCHHHEEEECCCCCHHHHCHHHHHHHHHCCCCCCEEEEEE-EECCCCCCH-HHHHHHHHHHHHH-CCCEEEEECCC T ss_conf 86199856899976756867623245654530688998699998-207664229-9999999976641-87379997478 Q ss_pred CCCHHHHHHHHHHC--CCCCCCCCCCCCCHHHHHCCCEEEECC----CCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH Q ss_conf 55167765322100--111134544445144430044899725----420233345529604875335524898999899 Q gi|254781097|r 227 EDDKEKVQKQYDEL--GCKATLACFFKDIERYIVEANLLICRS----GALTVSEIAVIGRPAILVPYPHSVDQDQLHNAY 300 (369) Q Consensus 227 ~~~~~~~~~~~~~~--~~~~~v~~f~~~m~~~~~~aDlvIsra----G~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~ 300 (369) T Consensus 229 G~~~~~l~~~~~~~~l~~~V~~~G~~~d~~~~~~~~di~v~pS~~Egfg~~~lEAma~G~pvI~s~----~gg----~~e 300 (353) T cd03811 229 GPLREELEALAKELGLADRVHFLGFQSNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATD----CPG----PRE 300 (353) T ss_pred CHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCEEECCCCCCCCCHHHHHHHHCCCCEEECC----CCC----HHH T ss_conf 603999997788659860687548664302324208688715434688538999998099899948----998----489 Q ss_pred HHHHCCCEEEEEHHCCCHHHHHHHHHH---HHCCHHHHHHHHHHHHHC Q ss_conf 999889889980001998999999999---861899999999999852 Q gi|254781097|r 301 YLQEGGGAKVITENFLSPERLAEELCS---AMKKPSCLVQMAKQVSMK 345 (369) Q Consensus 301 ~l~~~G~a~~i~~~~~~~~~l~~~i~~---ll~d~~~l~~m~~~~~~~ 345 (369) T Consensus 301 ~i~~g~~G~l~~~~d--~~~la~~i~~l~~l~~~~~~~~~~g~~~~~~ 346 (353) T cd03811 301 ILEDGENGLLVPVGD--EAALAAAALALLDLLLDPELRERLAAAARER 346 (353) T ss_pred HHCCCCCEEEECCCC--HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH T ss_conf 844898389978999--9999999999985149999999999999999 |
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.3e-17 Score=139.82 Aligned_cols=326 Identities=21% Similarity=0.241 Sum_probs=182.3 Q ss_pred EEEEE-CC-C-CHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCC Q ss_conf 69998-78-8-525620799999999965983999957237676244468751687525656533123321110001211 Q gi|254781097|r 6 VILLV-AG-G-TGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAF 82 (369) Q Consensus 6 ~ili~-~g-G-TGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (369) T Consensus 1 KIl~v~~~l~~~GG~e~~~~~la~~L~~~G~~V~vit~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~-------~~~~ 72 (348) T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEKGHEVTIISLDKGEPPFYEL-DPKIKVIDLGDKRDSKLLAR-------FKKL 72 (348) T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCC-CCCEEEEECCCCCCCCHHHH-------HHHH T ss_conf 989997979999878999999999998779989999966999864405-89749998887654205678-------9999 Q ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHH-HCCCCCEEECCCCCC----HH----HHHHHHHHHHHHHCCCCC---CC Q ss_conf 0135554203444243126532102478886-234110122153200----15----677889999987413432---22 Q gi|254781097|r 83 IASLRLIKKLKPNVVVGFGGYHSISPLLAGM-ILRIPSMVHEQNVIM----GK----ANRLLSWGVQIIARGLVS---SQ 150 (369) Q Consensus 83 ~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~-~l~iP~vihEqN~v~----G~----~nk~l~~~a~~v~~~~~~---~~ 150 (369) T Consensus 73 ~~l~~~~~~~~~Dvi~~~~~~--~~~~~~~~~~~~~~~i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~ii~~S~~~~~~~ 150 (348) T cd03820 73 RRLRKLLKNNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEHNSPDAYKKRLRRLLLRRLLYRRADAVVVLTEEDRALY 150 (348) T ss_pred HHHHHHHHHCCCCEEEECCCC--HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHH T ss_conf 999999997599999998963--699999997599828999757856630136799999999986899999699999987 Q ss_pred CCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC Q ss_conf 23556673253044432456543334433114478148986304322-21023334454432320246606776202551 Q gi|254781097|r 151 KKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLVIMQQVREDD 229 (369) Q Consensus 151 ~~~~~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~ 229 (369) T Consensus 151 ~~~~~~k~~vI~N~v~~~~~~~-------~~~~~~~~il~v-GRl~~~Kg~~-~li~a~~~l~~~~-~~~~l~ivG~G~~ 220 (348) T cd03820 151 YKKFNKNVVVIPNPLPFPPEEP-------SSDLKSKRILAV-GRLVPQKGFD-LLIEAWAKIAKKH-PDWKLRIVGDGPE 220 (348) T ss_pred HHCCCCCEEEECCCCCHHHCCC-------CCCCCCCEEEEE-ECCCCCCCHH-HHHHHHHHHHHHC-CCEEEEEEECCCC T ss_conf 5237889899889988232265-------446679889999-3786324949-9988889888648-9859999946875 Q ss_pred HHHHHHHHHHC--CCCCCCCCCCCCCHHHHHCCCEEEECC---C-CHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH Q ss_conf 67765322100--111134544445144430044899725---4-20233345529604875335524898999899999 Q gi|254781097|r 230 KEKVQKQYDEL--GCKATLACFFKDIERYIVEANLLICRS---G-ALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQ 303 (369) Q Consensus 230 ~~~~~~~~~~~--~~~~~v~~f~~~m~~~~~~aDlvIsra---G-~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~ 303 (369) T Consensus 221 ~~~l~~~i~~~~l~~~v~~~G~~~~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PvIas~~~gg-------~~e~v~ 293 (348) T cd03820 221 REALEALIKELGLEDRVILLGFTKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTG-------PSEIIE 293 (348) T ss_pred CCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCC-------HHHHHC T ss_conf 3201567776335773642475222233221357531464124587089999986999999679988-------499953 Q ss_pred HCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH Q ss_conf 889889980001998999999999861899999999999852783279999999999 Q gi|254781097|r 304 EGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEK 360 (369) Q Consensus 304 ~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~ 360 (369) T Consensus 294 ~~~~G~l~~~~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~fsw~~i~~~ye~ 348 (348) T cd03820 294 DGVNGLLVPNG--DVEALAEALLRLMEDEELRKRMGANARESAERFSIENIIKQWEE 348 (348) T ss_pred CCCEEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCC T ss_conf 89629998899--99999999999977999999999999999996999999999659 |
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-16 Score=135.94 Aligned_cols=324 Identities=17% Similarity=0.163 Sum_probs=180.1 Q ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHC Q ss_conf 85256207999999999659839999572376762444687516875256565331233211100012110135554203 Q gi|254781097|r 13 GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLRLIKKL 92 (369) Q Consensus 13 GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~~~ 92 (369) T Consensus 10 ~~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~-------~~~~~~~~~~~~i~~~ 78 (360) T cd04951 10 GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPIDATIILNL---N-MSKNPL-------SFLLALWKLRKILRQF 78 (360) T ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEC---C-CCCCHH-------HHHHHHHHHHHHHHHH T ss_conf 9813799999999999976998999981798544433457337863---7-666767-------8999999999999982 Q ss_pred CCCEEEECCCCCCHHHHHHHHHCC-CCCEEECCCC-CCHHHHHHHHHHHHHHH----CCCCCC------CCCCCCCCCEE Q ss_conf 444243126532102478886234-1101221532-00156778899999874----134322------22355667325 Q gi|254781097|r 93 KPNVVVGFGGYHSISPLLAGMILR-IPSMVHEQNV-IMGKANRLLSWGVQIIA----RGLVSS------QKKVLLRKIIV 160 (369) Q Consensus 93 kPDvVi~tGGy~s~P~~iaA~~l~-iP~vihEqN~-v~G~~nk~l~~~a~~v~----~~~~~~------~~~~~~~k~~~ 160 (369) T Consensus 79 ~pDvIh~h~~~~~~~~~~~~~~~~~~~~i~t~h~~~~~~~~~~~~~~~~~~~~~~~~~vs~~~~~~~~~~~~~~~~ki~v 158 (360) T cd04951 79 KPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRLRMLAYRLTDFLSDLTTNVSKEALDYFIASKAFNANKSFV 158 (360) T ss_pred CCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEE T ss_conf 99999986630789999999857998199985888754179999999998887865233399999999855888444899 Q ss_pred EECCCCHHHHHHHHH----HHHHHCCCCCCEEEEEECCCC-CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH Q ss_conf 304443245654333----443311447814898630432-221023334454432320246606776202551677653 Q gi|254781097|r 161 TGNPIRSSLIKMKDI----PYQSSDLDQPFHLLVFGGSQG-AKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQK 235 (369) Q Consensus 161 ~G~PvR~~~~~~~~~----~~~~~~~~~~~~ILv~GGS~G-a~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~ 235 (369) T Consensus 159 I~ngvd~~~f~~~~~~~~~~r~~~~~~~~~~~il~vgRl~~~Kg~~-~li~a~~~l~~~-~~~~~l~ivG~G~~~~~l~~ 236 (360) T cd04951 159 VYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILAVGRLVEAKDYP-NLLKAFAKLLSD-YLDIKLLIAGDGPLRATLER 236 (360) T ss_pred ECCCCCHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHH-HHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHH T ss_conf 6687344421876156788998619998987999984066331157-899999999864-89979999678256788876 Q ss_pred HHHHCC--CCCCCCCCCCCCHHHHHCCCEEEECC---C-CHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEE Q ss_conf 221001--11134544445144430044899725---4-20233345529604875335524898999899999889889 Q gi|254781097|r 236 QYDELG--CKATLACFFKDIERYIVEANLLICRS---G-ALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAK 309 (369) Q Consensus 236 ~~~~~~--~~~~v~~f~~~m~~~~~~aDlvIsra---G-~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~ 309 (369) T Consensus 237 ~~~~~~l~~~v~f~G~~~d~~~~~~~adi~v~pS~~Egfg~~~lEAma~G~PvI~s~~g----g----~~eii~~--~G~ 306 (360) T cd04951 237 LIKALGLSNRVKLLGLRDDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAG----G----VREVVGD--SGL 306 (360) T ss_pred HHHHHCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCC----C----HHHEECC--CEE T ss_conf 67761777615424751026898762142558865578870899999859999987899----7----2655748--649 Q ss_pred EEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHH Q ss_conf 9800019989999999998618999999999998527-832799999999999 Q gi|254781097|r 310 VITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKG-KPQAVLMLSDLVEKL 361 (369) Q Consensus 310 ~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~-~~~aa~~i~~~i~~l 361 (369) T Consensus 307 lv~~~--d~~~la~~i~~ll~~~~~~~~~~~~~~~~v~~~fs~~~~~~~~~~l 357 (360) T cd04951 307 IVPIS--DPEALANKIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTL 357 (360) T ss_pred EECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH T ss_conf 98399--9999999999998791999999999999999869999999999997 |
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.6e-16 Score=132.54 Aligned_cols=332 Identities=15% Similarity=0.155 Sum_probs=180.1 Q ss_pred EEEEECC----CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC Q ss_conf 6999878----852562079999999996598399995723767624446875168752565653312332111000121 Q gi|254781097|r 6 VILLVAG----GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKA 81 (369) Q Consensus 6 ~ili~~g----GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (369) T Consensus 1 kIaivt~~y~P~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~---~~~~~~ 72 (374) T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEE--VVVVRPFRVPTFKYP---DF---RLPLPI 72 (374) T ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC--CCEEEEECCCCCCCC---CH---HHHHHH T ss_conf 9899958989999809999999999999779989999727988775435--762898436777652---13---455557 Q ss_pred CHHHHHHHHHCCCCEEEECCCCC-CHHHHHHHHHCCCCCEE--ECC---------CCCCHHH-------HHHHHHHHHHH Q ss_conf 10135554203444243126532-10247888623411012--215---------3200156-------77889999987 Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGYH-SISPLLAGMILRIPSMV--HEQ---------NVIMGKA-------NRLLSWGVQII 142 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy~-s~P~~iaA~~l~iP~vi--hEq---------N~v~G~~-------nk~l~~~a~~v 142 (369) T Consensus 73 ~~~~~~~~~~~~~DvIh~~~~~~~~~~a~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 152 (374) T cd03817 73 PRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAV 152 (374) T ss_pred HHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEE T ss_conf 99999999866999999878258899999999974995999955777998876311101356789999999999859999 Q ss_pred HCCCCCCC----CCCCCCCCEEEECCCCHHHHHHHHHH--HHHHCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHC Q ss_conf 41343222----23556673253044432456543334--433114478148986304322-210233344544323202 Q gi|254781097|r 143 ARGLVSSQ----KKVLLRKIIVTGNPIRSSLIKMKDIP--YQSSDLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQ 215 (369) Q Consensus 143 ~~~~~~~~----~~~~~~k~~~~G~PvR~~~~~~~~~~--~~~~~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~ 215 (369) T Consensus 153 i~~S~~~~~~l~~~~~~~~i~vI~ngvd~~~f~~~~~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~-~~li~a~~~l~~~- 230 (374) T cd03817 153 IAPSEKIADLLREYGVKRPIEVIPTGIDLDRFEPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNI-DFLIRAFARLLKE- 230 (374) T ss_pred EECHHHHHHHHHHCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCHH-HHHHHHHHHHHHC- T ss_conf 97809999999970899988998696066643986417899981899998499997057542107-8999999988741- Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHC--CCCCCCCCCC--CCCHHHHHCCCEEEEC----CCCHHHHHHHHHCCCEEEEEC Q ss_conf 4660677620255167765322100--1111345444--4514443004489972----542023334552960487533 Q gi|254781097|r 216 RKRLVIMQQVREDDKEKVQKQYDEL--GCKATLACFF--KDIERYIVEANLLICR----SGALTVSEIAVIGRPAILVPY 287 (369) Q Consensus 216 ~~~~~v~~~~g~~~~~~~~~~~~~~--~~~~~v~~f~--~~m~~~~~~aDlvIsr----aG~~Ti~E~~~~g~P~IlIP~ 287 (369) T Consensus 231 ~~~~~l~ivG~G~~~~~l~~~~~~~~l~~~V~f~G~v~~~~~~~~l~~adi~v~pS~~E~fg~~~~EAma~G~PvI~s~~ 310 (374) T cd03817 231 EPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDA 310 (374) T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECC T ss_conf 89848999877447655678888742466244358875667787644247544777665775999999981998999179 Q ss_pred CCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH Q ss_conf 55248989998999998898899800019989999999998618999999999998527832799999999 Q gi|254781097|r 288 PHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLV 358 (369) Q Consensus 288 p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i 358 (369) T Consensus 311 g--------g~~e~i~~g~~G~l~~~~~---~~l~~~i~~l~~~~~~~~~~~~~a~~~a~~f~~~~~~~~~ 370 (374) T cd03817 311 P--------GLPDLVADGENGFLFPPGD---EALAEALLRLLQDPELRRRLSKNAEESAEKFSFAKKVEKL 370 (374) T ss_pred C--------CHHHHHHCCCEEEEECCCH---HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHH T ss_conf 9--------7599964798599969786---9999999999759999999999999999978999999999 |
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-16 Score=136.11 Aligned_cols=328 Identities=16% Similarity=0.145 Sum_probs=179.5 Q ss_pred EEEE-CC-CCHHHHHHHHHHHHHHHHCCCEEEEEECHH-H--HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC Q ss_conf 9998-78-852562079999999996598399995723-7--67624446875168752565653312332111000121 Q gi|254781097|r 7 ILLV-AG-GTGGHVFPAVALSHELKNRGYAVYLITDRR-A--RSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKA 81 (369) Q Consensus 7 ili~-~g-GTGGHi~palala~~L~~~g~~v~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (369) T Consensus 2 Il~v~~~l~~GG~e~~~~~la~~L~~~g~~v~vi~~~~~~~~~~~~~-~~~i~v~~l~~~---~~--~~~-------~~~ 68 (365) T cd03807 2 VLHVITGLDVGGAERMLVRLLKGLDRDRFEHVVISLTDRGELGEELE-EAGVPVYCLGKR---PG--RPD-------PGA 68 (365) T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHH-HCCCEEEECCCC---CC--CCC-------HHH T ss_conf 89996989994189999999999997799499999579985578987-489569992787---66--568-------899 Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCC-CCCEE--ECCCCCC-HHH-------HHHHHHHHHHHHCCCCCCC Q ss_conf 10135554203444243126532102478886234-11012--2153200-156-------7788999998741343222 Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILR-IPSMV--HEQNVIM-GKA-------NRLLSWGVQIIARGLVSSQ 150 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~-iP~vi--hEqN~v~-G~~-------nk~l~~~a~~v~~~~~~~~ 150 (369) T Consensus 69 ~~~l~~~i~~~~~DiIh~~~~~~~~~~~l~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~S~~~~ 148 (365) T cd03807 69 LLRLYKLIRRLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGKKSTRLVARLRRLLSSFIPLIVANSAAAA 148 (365) T ss_pred HHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHH T ss_conf 99999999983999999877426799999999759982899956885321010579999999999842999999499999 Q ss_pred -----CCCCCCCCEEEECCCCHHHHHH----HHHHHHHHCCCCCCEEEEEECCCC-CCCHHHHHHHHHHHHHHHCCCCCE Q ss_conf -----2355667325304443245654----333443311447814898630432-221023334454432320246606 Q gi|254781097|r 151 -----KKVLLRKIIVTGNPIRSSLIKM----KDIPYQSSDLDQPFHLLVFGGSQG-AKVFSDIVPKSIALIPEMQRKRLV 220 (369) Q Consensus 151 -----~~~~~~k~~~~G~PvR~~~~~~----~~~~~~~~~~~~~~~ILv~GGS~G-a~~ln~~v~~~~~~l~~~~~~~~~ 220 (369) T Consensus 149 ~~~~~~~~~~~~~~vI~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~-~li~a~~~l~~~-~~~~~ 226 (365) T cd03807 149 EYHQAIGYPPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDTFLIGIVARLHPQKDHA-TLLRAAALLLKK-FPNAR 226 (365) T ss_pred HHHHHHCCCHHHEEEECCCCCHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHH-HHHHHHHHHHHH-CCCEE T ss_conf 9999819984568998998678866987036799999829998886999950465310156-788999998875-88827 Q ss_pred EEEEECCCCHHHHHHHH---HHCCCCCCCCCCCCCCHHHHHCCCEEEEC----CCCHHHHHHHHHCCCEEEEECCCCCCC Q ss_conf 77620255167765322---10011113454444514443004489972----542023334552960487533552489 Q gi|254781097|r 221 IMQQVREDDKEKVQKQY---DELGCKATLACFFKDIERYIVEANLLICR----SGALTVSEIAVIGRPAILVPYPHSVDQ 293 (369) Q Consensus 221 v~~~~g~~~~~~~~~~~---~~~~~~~~v~~f~~~m~~~~~~aDlvIsr----aG~~Ti~E~~~~g~P~IlIP~p~a~~~ 293 (369) T Consensus 227 l~i~G~g~~~~~~~~~~~~~~~l~~~v~f~G~~~d~~~~~~~adi~v~pS~~Egf~~~~lEAma~G~PvI~s~~g----g 302 (365) T cd03807 227 LLLVGDGPDRANLELLALKELGLEDKVILLGERSDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVG----D 302 (365) T ss_pred EEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCC----C T ss_conf 999837855889999899975998739993663318999987160338870005332799999859999986799----8 Q ss_pred HHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHH Q ss_conf 89998999998898899800019989999999998618999999999998527-832799999999999 Q gi|254781097|r 294 DQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKG-KPQAVLMLSDLVEKL 361 (369) Q Consensus 294 hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~-~~~aa~~i~~~i~~l 361 (369) T Consensus 303 ~----~eii~~--~G~l~~~~--d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~l 363 (365) T cd03807 303 N----AELVGD--TGFLVPPG--DPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365) T ss_pred C----HHEECC--CEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH T ss_conf 4----114517--67997799--9999999999997799999999999999999868999999999997 |
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-16 Score=135.36 Aligned_cols=334 Identities=16% Similarity=0.111 Sum_probs=183.8 Q ss_pred EEEEEC----CCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC Q ss_conf 699987----8852562079999999996598399995723767624446875168752565653312332111000121 Q gi|254781097|r 6 VILLVA----GGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKA 81 (369) Q Consensus 6 ~ili~~----gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (369) T Consensus 2 kI~i~~~P~~GG~e~~---v~~La~~L~~~GHeV~vit~~~~~~~~~~~~~~~~~~v~~~~~---~~~~---~~~~~~~~ 72 (371) T cd04962 2 KIGIVCYPTYGGSGVV---ATELGKALARRGHEVHFITSSRPFRLDEYSPNIFFHEVEVPQY---PLFQ---YPPYDLAL 72 (371) T ss_pred EEEEECCCCCCCHHHH---HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCC---CCCC---CCCCHHHH T ss_conf 7999899999869999---9999999997599999995689876555689737998468776---5344---67213789 Q ss_pred CHHHHHHHHHCCCCEEEECCCC-CCHHHHHH---HHHCCCCCE--EECCCC-CCHHH------HHHHHHHHHHHHCCCCC Q ss_conf 1013555420344424312653-21024788---862341101--221532-00156------77889999987413432 Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGY-HSISPLLA---GMILRIPSM--VHEQNV-IMGKA------NRLLSWGVQIIARGLVS 148 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy-~s~P~~ia---A~~l~iP~v--ihEqN~-v~G~~------nk~l~~~a~~v~~~~~~ 148 (369) T Consensus 73 ~~~l~~~~~~~~~DvvH~h~~~p~~~~~~l~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~a~~vi~~S~~ 152 (371) T cd04962 73 ASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITLVGQDPSFQPATRFSIEKSDGVTAVSES 152 (371) T ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHCCEEEECCHH T ss_conf 99999999973998899725542679999999986447997899937985564214745668999999758989989999 Q ss_pred CC-----CCCCCCCCEEEECCCCHHHHHHHHHH--HHHHC-CCCCCEEEEEECCCC-CCCHHHHHHHHHHHHHHHCCCCC Q ss_conf 22-----23556673253044432456543334--43311-447814898630432-22102333445443232024660 Q gi|254781097|r 149 SQ-----KKVLLRKIIVTGNPIRSSLIKMKDIP--YQSSD-LDQPFHLLVFGGSQG-AKVFSDIVPKSIALIPEMQRKRL 219 (369) Q Consensus 149 ~~-----~~~~~~k~~~~G~PvR~~~~~~~~~~--~~~~~-~~~~~~ILv~GGS~G-a~~ln~~v~~~~~~l~~~~~~~~ 219 (369) T Consensus 153 ~~~~~~~~~~~~~~i~vI~Ngvd~~~f~~~~~~~~~~~~~~~~~~~~i~~v-grl~~~Kg~~-~ll~a~~~l~~~~~--~ 228 (371) T cd04962 153 LRQETYELFDITKEIEVIPNFVDEDRFRPKPDEALKRRLGAPEGEKVLIHI-SNFRPVKRID-DVIRIFAKVRKEVP--A 228 (371) T ss_pred HHHHHHHHCCCCCCEEEECCCCCHHHCCCCCCHHHHHHHCCCCCCEEEEEE-CCCCHHCCHH-HHHHHHHHHHHCCC--E T ss_conf 999999960999888998797573214888507899970999898599994-2650214969-99999998630576--5 Q ss_pred EEEEEECCCCHHHHHHHHHHCC--CCCCCCCCCCCCHHHHHCCCEEEECC---C-CHHHHHHHHHCCCEEEEECCCCCCC Q ss_conf 6776202551677653221001--11134544445144430044899725---4-2023334552960487533552489 Q gi|254781097|r 220 VIMQQVREDDKEKVQKQYDELG--CKATLACFFKDIERYIVEANLLICRS---G-ALTVSEIAVIGRPAILVPYPHSVDQ 293 (369) Q Consensus 220 ~v~~~~g~~~~~~~~~~~~~~~--~~~~v~~f~~~m~~~~~~aDlvIsra---G-~~Ti~E~~~~g~P~IlIP~p~a~~~ 293 (369) T Consensus 229 ~l~ivG~G~~~~~~~~~~~~~~l~~~V~f~G~~~~~~~~~~~adi~v~pS~~E~fg~vilEAma~G~PvIat~~g----- 303 (371) T cd04962 229 RLLLVGDGPERSPAERLARELGLQDDVLFLGKQDHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAG----- 303 (371) T ss_pred EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCC----- T ss_conf 999982640377888888762103136632736559999985511138732443202599999569949986899----- Q ss_pred HHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHH Q ss_conf 899989999988988998000199899999999986189999999999985278-327999999999999 Q gi|254781097|r 294 DQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGK-PQAVLMLSDLVEKLA 362 (369) Q Consensus 294 hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~-~~aa~~i~~~i~~la 362 (369) T Consensus 304 ---g~~e~v~~g~~G~l~~~~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~iY 368 (371) T cd04962 304 ---GIPEVVKHGETGFLVDVG--DVEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERIVPQYEALY 368 (371) T ss_pred ---CHHHHHCCCCEEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH T ss_conf ---838997089718997899--99999999999976999999999999999998689999999999998 |
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.5e-16 Score=130.77 Aligned_cols=333 Identities=16% Similarity=0.153 Sum_probs=185.2 Q ss_pred CEEEE-ECC-CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCC--CCCCCEEEEECCCCCCCCHHHHHHHHHHCCC Q ss_conf 76999-878-8525620799999999965983999957237676244--4687516875256565331233211100012 Q gi|254781097|r 5 NVILL-VAG-GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITD--FPADSIYEIVSSQVRFSNPFVFWNSLVILWK 80 (369) Q Consensus 5 ~~ili-~~g-GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (369) T Consensus 2 ~~IlhiI~~l~~GGaE~~~~~l~~~l~~~~~~~~vi~~~~~~~~~~~~~~~~v~~~~l~~~~------~~~~~------- 68 (374) T TIGR03088 2 PLIVHVVYRFDVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRKRIQRPDVAFYALHKQP------GKDVA------- 68 (374) T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCEEEECCCCC------CCCHH------- T ss_conf 88999908999982799999999978875993999997898457899986898899907887------64799------- Q ss_pred CCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCC-----CCHH--H----HHHHHHHHHHHHCCCCCC Q ss_conf 1101355542034442431265321024788862341101221532-----0015--6----778899999874134322 Q gi|254781097|r 81 AFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNV-----IMGK--A----NRLLSWGVQIIARGLVSS 149 (369) Q Consensus 81 ~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~-----v~G~--~----nk~l~~~a~~v~~~~~~~ 149 (369) T Consensus 69 ~~~~l~~li~~~kpDiIh~~-~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~k~~~~~~~~~i~vs~~~ 147 (374) T TIGR03088 69 VYPQLYRLLRQLRPDIVHTR-NLAALEAQLPAALAGVPARIHGEHGRDVFDLDGSNWKYRWLRRLYRPLIHHYVAVSRDL 147 (374) T ss_pred HHHHHHHHHHHHCCCEEEEC-CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCHHH T ss_conf 99999999998398489863-61169999999984998899960787543743105899999999998568899915899 Q ss_pred C------CCCCCCCCEEEECCCCHHHHHHHHHH----HHHH-CCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHH--- Q ss_conf 2------23556673253044432456543334----4331-14478148986304322-21023334454432320--- Q gi|254781097|r 150 Q------KKVLLRKIIVTGNPIRSSLIKMKDIP----YQSS-DLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEM--- 214 (369) Q Consensus 150 ~------~~~~~~k~~~~G~PvR~~~~~~~~~~----~~~~-~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~--- 214 (369) T Consensus 148 ~~~~~~~~~~~~~ki~~I~Ngid~~~f~~~~~~~~~~~~~~~~~~~~~-~i~~vgRl~~~Kg~~-~li~a~~~l~~~~~~ 225 (374) T TIGR03088 148 EDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADESV-VVGTVGRLQAVKDQP-TLVRAFALLVRQLPE 225 (374) T ss_pred HHHHHHHHCCCHHHEEEECCCCCHHHCCCCCCCHHHHHHHCCCCCCCE-EEEEEEECEEECCHH-HHHHHHHHHHHHCCC T ss_conf 999998709987898996687765215877310677654315898776-999966340307879-999999999986777 Q ss_pred CCCCCEEEEEECCCCHHHHHHHHHHCCC--CCCCCCCCCCCHHHHHCCCEEEECC---C-CHHHHHHHHHCCCEEEEECC Q ss_conf 2466067762025516776532210011--1134544445144430044899725---4-20233345529604875335 Q gi|254781097|r 215 QRKRLVIMQQVREDDKEKVQKQYDELGC--KATLACFFKDIERYIVEANLLICRS---G-ALTVSEIAVIGRPAILVPYP 288 (369) Q Consensus 215 ~~~~~~v~~~~g~~~~~~~~~~~~~~~~--~~~v~~f~~~m~~~~~~aDlvIsra---G-~~Ti~E~~~~g~P~IlIP~p 288 (369) T Consensus 226 ~~~~~~l~i~G~G~~~~~l~~~i~~~~l~~~v~f~G~~~~~~~~~~~~Di~v~~S~~EGf~~~llEAma~g~PvIasdv- 304 (374) T TIGR03088 226 GAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAV- 304 (374) T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCCCEEECCC- T ss_conf 6688899998177659999999997187775853787468999999639003134434467799999975997999189- Q ss_pred CCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHH Q ss_conf 52489899989999988988998000199899999999986189999999999985278-3279999999999998 Q gi|254781097|r 289 HSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGK-PQAVLMLSDLVEKLAH 363 (369) Q Consensus 289 ~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~-~~aa~~i~~~i~~la~ 363 (369) T Consensus 305 ---gg----~~eii~~~~~G~l~~~~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~v~~~Fs~~~~~~~~~~lY~ 371 (374) T TIGR03088 305 ---GG----NPELVQHGVTGALVPPG--DAVALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYAGLYD 371 (374) T ss_pred ---CC----HHHHHCCCCCEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH T ss_conf ---98----18986179868997899--999999999999779999999999999999987899999999999999 |
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=4e-16 Score=132.27 Aligned_cols=318 Identities=17% Similarity=0.198 Sum_probs=173.3 Q ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH Q ss_conf 88525620799999999965983999957237676244468751687525656533123321110001211013555420 Q gi|254781097|r 12 GGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLRLIKK 91 (369) Q Consensus 12 gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~~ 91 (369) T Consensus 13 GGi~~~---~~~La~~L~~~Gh~V~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----------~~~~~~~~~i~~ 74 (366) T cd03822 13 CGIATF---TTDLVNALSARGPDVLVVSVAALYPSLLYGGEQEVVRV----IVLDNP-----------LDYRRAARAIRL 74 (366) T ss_pred CCHHHH---HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEE----CCCCCC-----------HHHHHHHHHHHH T ss_conf 838999---99999999867998999958888875444677641676----036673-----------259999999985 Q ss_pred CCCCEEEEC--CCCCC-H---HHHHHHHHCCCCCEEECCCCCCH---H----HHHHHHHHHHHHHCCCCCC----CCCCC Q ss_conf 344424312--65321-0---24788862341101221532001---5----6778899999874134322----22355 Q gi|254781097|r 92 LKPNVVVGF--GGYHS-I---SPLLAGMILRIPSMVHEQNVIMG---K----ANRLLSWGVQIIARGLVSS----QKKVL 154 (369) Q Consensus 92 ~kPDvVi~t--GGy~s-~---P~~iaA~~l~iP~vihEqN~v~G---~----~nk~l~~~a~~v~~~~~~~----~~~~~ 154 (369) T Consensus 75 ~~~Dvvh~~~~~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~ 154 (366) T cd03822 75 SGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPGDRALLRLLLRRADAVIVMSSELLRALLLRAY 154 (366) T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCC T ss_conf 39999999365332106689999999985599899997777655422779999999998679999957999999986469 Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEEEC--CC--- Q ss_conf 6673253044432456543334433114478148986304322-21023334454432320246606776202--55--- Q gi|254781097|r 155 LRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLVIMQQVR--ED--- 228 (369) Q Consensus 155 ~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v~~~~g--~~--- 228 (369) T Consensus 155 ~~~i~vIpngv~~~~~~~~~~~~~~~~~~~~~~il~~-Grl~~~Kg~-~~li~A~~~l~~~~-~~~~l~ivG~~~~~~~~ 231 (366) T cd03822 155 PEKIAVIPHGVPDPPAEPPESLKALGGLDGRPVLLTF-GLLRPYKGL-ELLLEALPLLVAKH-PDVRLLVAGETHPDLER 231 (366) T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEEE-ECCCCCCCH-HHHHHHHHHHHHHC-CCEEEEEEECCCCCHHH T ss_conf 8739996799875455886778874589998599998-534055485-99999999988768-98599999589874266 Q ss_pred CHHHHHHHHHHCC--CCCCCC-CCC--CCCHHHHHCCCEEEEC--CCC----HHHHHHHHHCCCEEEEECCCCCCCHHHH Q ss_conf 1677653221001--111345-444--4514443004489972--542----0233345529604875335524898999 Q gi|254781097|r 229 DKEKVQKQYDELG--CKATLA-CFF--KDIERYIVEANLLICR--SGA----LTVSEIAVIGRPAILVPYPHSVDQDQLH 297 (369) Q Consensus 229 ~~~~~~~~~~~~~--~~~~v~-~f~--~~m~~~~~~aDlvIsr--aG~----~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~ 297 (369) T Consensus 232 ~~~~~~~~~~~lgl~~~V~f~~g~v~~~~~~~~~~~adv~v~Ps~~e~~~~s~v~~EAma~G~PvVat~~g----g---- 303 (366) T cd03822 232 YRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVG----H---- 303 (366) T ss_pred HHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCC----C---- T ss_conf 78999999997399765532478889999999999557030555466544569999999749989990899----7---- Q ss_pred HHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH Q ss_conf 8999998898899800019989999999998618999999999998527832799999999999 Q gi|254781097|r 298 NAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKL 361 (369) Q Consensus 298 NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~l 361 (369) T Consensus 304 -~~ev~~~~~G~lv~~~--d~~~la~ai~~ll~d~~~r~~l~~~a~~~a~~~sW~~ia~~~~~l 364 (366) T cd03822 304 -AEEVLDGGTGLLVPPG--DPAALAEAIRRLLADPELAQALRARAREYARAMSWERVAERYLRL 364 (366) T ss_pred -HHEEECCCCEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH T ss_conf -4408839968998999--999999999999879999999999999999979999999999998 |
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.78 E-value=5e-16 Score=131.60 Aligned_cols=327 Identities=12% Similarity=0.123 Sum_probs=193.0 Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHH Q ss_conf 76999878852562079999999996598399995723767624446875168752565653312332111000121101 Q gi|254781097|r 5 NVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIA 84 (369) Q Consensus 5 ~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (369) T Consensus 227 ~~~FI~AGE~SGD~l-Ga~Li~~Lk~~~P~i~F~GVGGp~M~~eGl--~slf~me--~lsVMG~~EVL~~lp~L~~~~~~ 301 (607) T PRK01021 227 TSCFLSAGEASGDTL-GGNLLKEIKALYPDIRCFGVGGPQMRQEGL--EPLFNME--EFQVSGFWEVLLSLFKLYYRYRK 301 (607) T ss_pred CCEEEEECCCCHHHH-HHHHHHHHHHHCCCCEEEECCHHHHHHCCC--CCCCCHH--HCCCCCHHHHHHHHHHHHHHHHH T ss_conf 875799268625577-999999998549898899637799987688--6124467--71011489999889999999999 Q ss_pred HHHHHHHCCCCEEEECCCCCCHHHHHHHHHC--CC--CCEEECCCC----CCHHHHHHHHHHHHHHHCCCCCCCCCCC-- Q ss_conf 3555420344424312653210247888623--41--101221532----0015677889999987413432222355-- Q gi|254781097|r 85 SLRLIKKLKPNVVVGFGGYHSISPLLAGMIL--RI--PSMVHEQNV----IMGKANRLLSWGVQIIARGLVSSQKKVL-- 154 (369) Q Consensus 85 ~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l--~i--P~vihEqN~----v~G~~nk~l~~~a~~v~~~~~~~~~~~~-- 154 (369) T Consensus 302 l~~~i~~~~PD~~I~I-D~PdFNlrlak~lkk~gi~ik~vhYVsPsVWAWr~~R~-k~i~~~vD~~l~lfPFE~~~~~~~ 379 (607) T PRK01021 302 LYKTILKENPETVICI-DFPDFHFLLIKKLRKCGYKGKIIHYVCPSIWAWRPKRK-TILEKYLDLLLLILPFEQGLFKNS 379 (607) T ss_pred HHHHHHHCCCCEEEEE-CCCCCCHHHHHHHHHCCCCCCEEEEECCCEEEECCCHH-HHHHHHHHHHEECCCCCHHHHHCC T ss_conf 9999986199999995-89987889999999728999868997883688662179-999998867305267788999507 Q ss_pred CCCCEEEECCCCHHHHHHHHHHH--HHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH--HHCCCCCEEEEEECCCCH Q ss_conf 66732530444324565433344--33114478148986304322210233344544323--202466067762025516 Q gi|254781097|r 155 LRKIIVTGNPIRSSLIKMKDIPY--QSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIP--EMQRKRLVIMQQVREDDK 230 (369) Q Consensus 155 ~~k~~~~G~PvR~~~~~~~~~~~--~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~--~~~~~~~~v~~~~g~~~~ 230 (369) T Consensus 380 g~~~~yVGHPl~e~i~~~~~~~~~r~~l~~~~k~IIALLPGSR~SEI-~RlLPI~~~ai~~~~l~~~~~~lV~~a~p~~~ 458 (607) T PRK01021 380 PLRTVYLGHPLVETISNFQPCASWKEQLLPSDKPIVAAFPGSRRGDI-LRNLTIQVQAFLASSLAQTHQLLVSSANPKYD 458 (607) T ss_pred CCCCEEECCCCHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHH-HHHHHHHHHHHHHHHCCCCCEEEEECCCHHHH T ss_conf 99837978960120223477456998617788988999089978999-98749999999987244676499956876688 Q ss_pred HHHHHHHHHCC-CCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHC---- Q ss_conf 77653221001-1113454444514443004489972542023334552960487533552489899989999988---- Q gi|254781097|r 231 EKVQKQYDELG-CKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEG---- 305 (369) Q Consensus 231 ~~~~~~~~~~~-~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~---- 305 (369) T Consensus 459 ~~i~e~l~~~~~~~~~II~-~~~kyeam~aSDaALaASGTATL-E~ALagvPmVVa-YKl--npLTyfIAK~LvKI~lp~ 533 (607) T PRK01021 459 HLILDVLQQEGCLHSKIVP-SQFRYELMRECDCALAKCGTIVL-ETALNQTPTIVT-CQL--RPFDTFLAKYIFKILLPA 533 (607) T ss_pred HHHHHHHHHCCCCCCEECC-CHHHHHHHHHCCEEEECCCHHHH-HHHHHCCCEEEE-EEC--CHHHHHHHHHHHHHCCCC T ss_conf 9999999864898845717-32589999858899888778999-999838898999-967--827999999999725751 Q ss_pred -C-----CEE-E----E-EHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC Q ss_conf -9-----889-9----8-0001998999999999861899999999999852 Q gi|254781097|r 306 -G-----GAK-V----I-TENFLSPERLAEELCSAMKKPSCLVQMAKQVSMK 345 (369) Q Consensus 306 -G-----~a~-~----i-~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~ 345 (369) T Consensus 534 vsLPNILagr~VVPElI~gQ~D~~PE~iAaAl-~lL~~p~~~ekq~~~c~~~ 584 (607) T PRK01021 534 YSLPNIILGSVIFPEFIGGKKDFHPEEVAAAL-DILKTSQSKEKQKEACRDL 584 (607) T ss_pred CCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHCHHHHHHHHHHHHHH T ss_conf 21130116998666636776658989999999-9871915679999999999 |
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.4e-16 Score=132.72 Aligned_cols=334 Identities=16% Similarity=0.127 Sum_probs=176.1 Q ss_pred EEEEECC----CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC Q ss_conf 6999878----852562079999999996598399995723767624446875168752565653312332111000121 Q gi|254781097|r 6 VILLVAG----GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKA 81 (369) Q Consensus 6 ~ili~~g----GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (369) T Consensus 1 KIl~i~~~~~P~~GG~e~~~~~la~~L~~~Gh~V~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~ 75 (375) T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALNGVPVKLFSIN--VAYGLNLA---RYLFPP 75 (375) T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEECCCC--CCCCCHHH---HHHHHH T ss_conf 9899959889999989999999999999779989999707987643102467516741665--55420133---322206 Q ss_pred CHHHHHHHHHCCCCEEEECCCC--CCHHHHHHHHHCCCCCEEECCCCCCH--HHH----HHHH-HH--------HHHHHC Q ss_conf 1013555420344424312653--21024788862341101221532001--567----7889-99--------998741 Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGY--HSISPLLAGMILRIPSMVHEQNVIMG--KAN----RLLS-WG--------VQIIAR 144 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy--~s~P~~iaA~~l~iP~vihEqN~v~G--~~n----k~l~-~~--------a~~v~~ 144 (369) T Consensus 76 ~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 155 (375) T cd03821 76 SLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHKALKKRLAWFLFERRLLQAAAAVHA 155 (375) T ss_pred HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE T ss_conf 89999998548999999868625669999999998499699997998603444434678889999999998740869997 Q ss_pred CCCC----CCCCCCCCCCEEEECCCCHHHHHHHHHHH--HHHC-CCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCC Q ss_conf 3432----22235566732530444324565433344--3311-4478148986304322-2102333445443232024 Q gi|254781097|r 145 GLVS----SQKKVLLRKIIVTGNPIRSSLIKMKDIPY--QSSD-LDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQR 216 (369) Q Consensus 145 ~~~~----~~~~~~~~k~~~~G~PvR~~~~~~~~~~~--~~~~-~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~ 216 (369) T Consensus 156 ~s~~~~~~~~~~~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~~~~-~il~vGRl~~~Kg~-~~li~a~~~l~~~~- 232 (375) T cd03821 156 TSEQEAAEIRRLGLKAPIAVIPNGVDIPPFAALPSRGRRRKFPILPDKR-IILFLGRLHPKKGL-DLLIEAFAKLAERF- 232 (375) T ss_pred CCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCC-EEEEEEECCCCHHH-HHHHHHHHHHHHHC- T ss_conf 6579999999628988889986972720148862378898548998983-89998713432147-78999999999767- Q ss_pred CCCEEEEEE-CCCCH-HHHHHHHHHC--CCCCCCCCCC--CCCHHHHHCCCEEEECC----CCHHHHHHHHHCCCEEEEE Q ss_conf 660677620-25516-7765322100--1111345444--45144430044899725----4202333455296048753 Q gi|254781097|r 217 KRLVIMQQV-REDDK-EKVQKQYDEL--GCKATLACFF--KDIERYIVEANLLICRS----GALTVSEIAVIGRPAILVP 286 (369) Q Consensus 217 ~~~~v~~~~-g~~~~-~~~~~~~~~~--~~~~~v~~f~--~~m~~~~~~aDlvIsra----G~~Ti~E~~~~g~P~IlIP 286 (369) T Consensus 233 ~~~~l~ivG~g~~~~~~~~~~~~~~~~l~~~V~f~G~~~~~~~~~~~~~adi~v~pS~~Egf~~~~lEAma~G~PvIas~ 312 (375) T cd03821 233 PDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTD 312 (375) T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHCCCCEEECC T ss_conf 98599999789826789999999982678558534776831109898515001468477664589999998599999927 Q ss_pred CCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC-CCHHHHHHHHHHH Q ss_conf 355248989998999998898899800019989999999998618999999999998527-8327999999999 Q gi|254781097|r 287 YPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKG-KPQAVLMLSDLVE 359 (369) Q Consensus 287 ~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~-~~~aa~~i~~~i~ 359 (369) T Consensus 313 ~----gg~----~e-ii~~~~g~~~~~---~~~~l~~~i~~l~~d~~~~~~~~~~ar~~~~~~fsw~~~~~~~~ 374 (375) T cd03821 313 K----VPW----QE-LIEYGCGWVVDD---DVDALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLL 374 (375) T ss_pred C----CCC----HH-EEECCCEEEECC---CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH T ss_conf 9----980----77-287884899492---99999999999976999999999999999999589999999974 |
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.7e-16 Score=132.46 Aligned_cols=333 Identities=16% Similarity=0.171 Sum_probs=175.0 Q ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHC---CCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHH Q ss_conf 852562079999999996598399995723767624---44687516875256565331233211100012110135554 Q gi|254781097|r 13 GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFIT---DFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLRLI 89 (369) Q Consensus 13 GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii 89 (369) T Consensus 19 d~GG~e~~v~~La~~L~~~GH~V~V~t~~~~~~~~~~~~~~~gv~v~rl~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~ 97 (398) T cd03800 19 DTGGQNVYVLELARALARLGHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGPAEYLPKEELWPYLDEFADDLLR-FLRR 97 (398) T ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH-HHHH T ss_conf 968879999999999998699699997247778888068249869999557885433277778789999999999-9998 Q ss_pred HHCCCCEEEECCCCCCHHHHHHHHHCCCCCEE--ECCC----CCCH------HHH-----HHHHHHHHHHHCCCCCCC-- Q ss_conf 20344424312653210247888623411012--2153----2001------567-----788999998741343222-- Q gi|254781097|r 90 KKLKPNVVVGFGGYHSISPLLAGMILRIPSMV--HEQN----VIMG------KAN-----RLLSWGVQIIARGLVSSQ-- 150 (369) Q Consensus 90 ~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vi--hEqN----~v~G------~~n-----k~l~~~a~~v~~~~~~~~-- 150 (369) T Consensus 98 ~~~~pDvIH~h~~~~~~~~~~~~~~~~ip~V~t~H~l~~~~~~~~~~~~~~~~~~r~~~e~~~~~~ad~via~S~~~~~~ 177 (398) T cd03800 98 EGGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEE 177 (398) T ss_pred HCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHH T ss_conf 38998889988840789999999971999999637511444332023554234789999999998499999879999999 Q ss_pred --C--CCCCCCCEEEECCCCHHHHHHH---HHHHHHHCCC-CCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEE Q ss_conf --2--3556673253044432456543---3344331144-78148986304322-210233344544323202466067 Q gi|254781097|r 151 --K--KVLLRKIIVTGNPIRSSLIKMK---DIPYQSSDLD-QPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLVI 221 (369) Q Consensus 151 --~--~~~~~k~~~~G~PvR~~~~~~~---~~~~~~~~~~-~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v 221 (369) T Consensus 178 ~~~~~~~~~~~i~vI~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~i~~v-GRl~~~Kg~-~~li~A~~~l~~~~-~~~~l 254 (398) T cd03800 178 LYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAV-GRLDPRKGI-DTLIRAYAELPELR-ERANL 254 (398) T ss_pred HHHHHCCCCCCEEEECCCCCHHHCCCCCCHHHHHHHHCCCCCCCEEEEE-CCCCHHCCH-HHHHHHHHHHHHHC-CCCEE T ss_conf 9997299902289976986774438898058999860899899489998-289602098-99999999988778-99689 Q ss_pred EEEECCC-C-----HHHHHHHHHHC--CCCCCCCCCC--CCCHHHHHCCCEEEECC---C-CHHHHHHHHHCCCEEEEEC Q ss_conf 7620255-1-----67765322100--1111345444--45144430044899725---4-2023334552960487533 Q gi|254781097|r 222 MQQVRED-D-----KEKVQKQYDEL--GCKATLACFF--KDIERYIVEANLLICRS---G-ALTVSEIAVIGRPAILVPY 287 (369) Q Consensus 222 ~~~~g~~-~-----~~~~~~~~~~~--~~~~~v~~f~--~~m~~~~~~aDlvIsra---G-~~Ti~E~~~~g~P~IlIP~ 287 (369) T Consensus 255 ~ivGg~~~~~~~~~~~~~~~~~~~~~l~~~V~f~G~~~~~~~~~~~~~adv~v~pS~~E~fgl~~lEAma~G~PvIas~~ 334 (398) T cd03800 255 VIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAV 334 (398) T ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCCEEECCC T ss_conf 99968876531345999999999759987499889899899999998578887545133221489999982999999389 Q ss_pred CCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC-HHHHHHHHHHH Q ss_conf 5524898999899999889889980001998999999999861899999999999852783-27999999999 Q gi|254781097|r 288 PHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKP-QAVLMLSDLVE 359 (369) Q Consensus 288 p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~-~aa~~i~~~i~ 359 (369) T Consensus 335 ----gg----~~e~v~~g~~G~l~~~~--d~~~la~ai~~ll~d~~~~~~~g~~ar~~~~~~fsw~~~a~~~l 397 (398) T cd03800 335 ----GG----PRDIVVDGVTGLLVDPR--DPEALAAALRRLLTDPALRRRLSRAGLRRARARYTWERVAARLL 397 (398) T ss_pred ----CC----CHHHHCCCCEEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH T ss_conf ----98----07774179718997899--99999999999977999999999999999998689999999974 |
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.6e-16 Score=130.30 Aligned_cols=320 Identities=15% Similarity=0.150 Sum_probs=177.9 Q ss_pred EEEEECC----CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC Q ss_conf 6999878----852562079999999996598399995723767624446875168752565653312332111000121 Q gi|254781097|r 6 VILLVAG----GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKA 81 (369) Q Consensus 6 ~ili~~g----GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (369) T Consensus 1 ki~~v~~~~P~~~etf---v~~la~~L~~~GHeV~v~~~~~~~~~~~~~--~--~~~~~~~~~-~~----~~~~~~~-~~ 67 (355) T cd03799 1 KIAYLVKEFPRLSETF---ILREILALEAAGHEVEIFSLRPPEDTLVHP--E--DRAELARTR-YL----ARSLALL-AQ 67 (355) T ss_pred CEEEECCCCCCCCCHH---HHHHHHHHHHCCCEEEEEECCCCCCCCCCC--C--CCCEECCCC-CC----HHHHHHH-HH T ss_conf 9899989898996179---999999999679849999534887773064--3--021215521-54----7779999-99 Q ss_pred CHHHHHHHHHCCCCEEEECCCCCC-HHHHHHHHHCCCCCEE--ECCCCCCHHHHHH---HHHHHHHH-HCCCCCCC---- Q ss_conf 101355542034442431265321-0247888623411012--2153200156778---89999987-41343222---- Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGYHS-ISPLLAGMILRIPSMV--HEQNVIMGKANRL---LSWGVQII-ARGLVSSQ---- 150 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy~s-~P~~iaA~~l~iP~vi--hEqN~v~G~~nk~---l~~~a~~v-~~~~~~~~---- 150 (369) T Consensus 68 ~~~l~~~i~~~~~DiIH~H~~~~~~~~~~~~~~~~~ip~v~t~Hg~d~~~~~~~~~l~~~~~~ad~ii~vS-~~~~~~l~ 146 (355) T cd03799 68 ALVLARELRRLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSPDAIDLDEKLARADFVVAIS-EYNRQQLI 146 (355) T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCEEEECC-HHHHHHHH T ss_conf 99999999777998999768833799999999974999999981676556736899999998399999989-99999999 Q ss_pred --CCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEEECC Q ss_conf --23556673253044432456543334433114478148986304322-210233344544323202466067762025 Q gi|254781097|r 151 --KKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLVIMQQVRE 227 (369) Q Consensus 151 --~~~~~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~ 227 (369) T Consensus 147 ~~~~~~~~ki~vi~ngvd~~~f~~~~----~~~~~~~~~il~v-Grl~~~Kg~-~~li~A~~~l~~~-~~~~~l~ivG~G 219 (355) T cd03799 147 RLLGCDPDKIHVVHCGVDLERFPPRP----PPPPGEPLRILSV-GRLVEKKGL-DYLLEALALLKDR-GIDFRLDIVGDG 219 (355) T ss_pred HHCCCCHHHEEEECCCCCHHHCCCCC----CCCCCCCEEEEEE-ECCCHHCCC-HHHHHHHHHHHHH-CCCEEEEEECCC T ss_conf 86099914689989964888879987----5577898699998-158021190-9999999999864-999799996676 Q ss_pred CCHHHHHHHHHHCC--CCCCCCCCC--CCCHHHHHCCCEEEE--CC-------C-CHHHHHHHHHCCCEEEEECCCCCCC Q ss_conf 51677653221001--111345444--451444300448997--25-------4-2023334552960487533552489 Q gi|254781097|r 228 DDKEKVQKQYDELG--CKATLACFF--KDIERYIVEANLLIC--RS-------G-ALTVSEIAVIGRPAILVPYPHSVDQ 293 (369) Q Consensus 228 ~~~~~~~~~~~~~~--~~~~v~~f~--~~m~~~~~~aDlvIs--ra-------G-~~Ti~E~~~~g~P~IlIP~p~a~~~ 293 (369) T Consensus 220 ~~~~~l~~~~~~l~l~~~V~f~G~v~~~~l~~~~~~adv~v~pS~~~~~~~~Eg~p~~~lEAma~G~PvVas~~~----g 295 (355) T cd03799 220 PLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVS----G 295 (355) T ss_pred HHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCC----C T ss_conf 048899999997499855076444464767999974989998452335677668777999999669989991799----8 Q ss_pred HHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC-CCHHHHHHHH Q ss_conf 89998999998898899800019989999999998618999999999998527-8327999999 Q gi|254781097|r 294 DQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKG-KPQAVLMLSD 356 (369) Q Consensus 294 hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~-~~~aa~~i~~ 356 (369) T Consensus 296 ----~~e~v~~g~~G~l~~~~--d~~~la~~i~~ll~d~~~~~~~~~~ar~~v~~~fs~~~~a~ 353 (355) T cd03799 296 ----IPELVEDGETGLLVPPG--DPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAA 353 (355) T ss_pred ----CHHHHCCCCCEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHH T ss_conf ----57662289858997999--99999999999987999999999999999998699599994 |
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=2e-16 Score=134.34 Aligned_cols=310 Identities=15% Similarity=0.109 Sum_probs=173.3 Q ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHC Q ss_conf 85256207999999999659839999572376762444687516875256565331233211100012110135554203 Q gi|254781097|r 13 GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLRLIKKL 92 (369) Q Consensus 13 GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~~~ 92 (369) T Consensus 8 ~~GGaE~~~~~La~~L~~~Gh~V~vi~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~-------~~~~~~l~~~l~~~ 77 (355) T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRLVAELEAEGSRHIKL---PFISKNPLRI-------LLNVARLRRLIREE 77 (355) T ss_pred CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCEEEEE---CCCCCCCHHH-------HHHHHHHHHHHHHH T ss_conf 9941799999999999987998999968998715566349669991---7877882899-------99999999999996 Q ss_pred CCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCH--HHHHHHHHHHHHH-HCCCCCCC------CCCCCCCCEEEEC Q ss_conf 4442431265321024788862341101221532001--5677889999987-41343222------2355667325304 Q gi|254781097|r 93 KPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVIMG--KANRLLSWGVQII-ARGLVSSQ------KKVLLRKIIVTGN 163 (369) Q Consensus 93 kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~v~G--~~nk~l~~~a~~v-~~~~~~~~------~~~~~~k~~~~G~ 163 (369) T Consensus 78 ~~Divh~h~~~~~~~~~~a~~~~~~~~i~t~H~~~~~~~~~~~~~~-~~~~~i~~S-~~~~~~~~~~~~~~~~ki~vI~n 155 (355) T cd03819 78 KVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNFRYNAIMA-RGDRVIAVS-NFIADHIRENYGVDPDRIRVIPR 155 (355) T ss_pred CCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH-HCCEEEEEC-HHHHHHHHHHHCCCHHHEEEECC T ss_conf 9989997786449999999985399789996787740679999997-279899945-89999999973998789999788 Q ss_pred CCCHHHHHHHH-------HHHHHHCCCCCCEEEEEECCCC-CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC----HH Q ss_conf 44324565433-------3443311447814898630432-221023334454432320246606776202551----67 Q gi|254781097|r 164 PIRSSLIKMKD-------IPYQSSDLDQPFHLLVFGGSQG-AKVFSDIVPKSIALIPEMQRKRLVIMQQVREDD----KE 231 (369) Q Consensus 164 PvR~~~~~~~~-------~~~~~~~~~~~~~ILv~GGS~G-a~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~----~~ 231 (369) T Consensus 156 gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGRl~~~Kg~-~~li~a~~~l~~~~-~~~~l~i~G~g~~~~~~~~ 233 (355) T cd03819 156 GVDLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQ-EVFIEALARLKKDD-PDVHLLIVGDAQGRRFYYA 233 (355) T ss_pred CCCHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCH-HHHHHHHHHHHHHC-CCEEEEEEECCCCCHHHHH T ss_conf 756542387778778899999862899998799996166544576-99999999998648-9979999707864168999 Q ss_pred HHHHHHHHC--CCCCCCCCCCCCCHHHHHCCCEEE--E-C-CC-CHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH Q ss_conf 765322100--111134544445144430044899--7-2-54-202333455296048753355248989998999998 Q gi|254781097|r 232 KVQKQYDEL--GCKATLACFFKDIERYIVEANLLI--C-R-SG-ALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQE 304 (369) Q Consensus 232 ~~~~~~~~~--~~~~~v~~f~~~m~~~~~~aDlvI--s-r-aG-~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~ 304 (369) T Consensus 234 ~~~~~~~~~~l~~~v~f~G~~~d~~~~~~~adi~v~pS~~~Egf~~vllEAma~G~PvV~s~~----gg----~~eii~~ 305 (355) T cd03819 234 ELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDH----GG----ARETVRP 305 (355) T ss_pred HHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECC----CC----CHHHCCC T ss_conf 999999981997628865762146899874032558877710000789999986998999089----99----4766158 Q ss_pred CCCEEEEEHHCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHCC Q ss_conf 89889980001998999999999861-8999999999998527 Q gi|254781097|r 305 GGGAKVITENFLSPERLAEELCSAMK-KPSCLVQMAKQVSMKG 346 (369) Q Consensus 305 ~G~a~~i~~~~~~~~~l~~~i~~ll~-d~~~l~~m~~~~~~~~ 346 (369) T Consensus 306 ~~~G~l~~~~--d~~~l~~~i~~~l~~~~~~r~~~~~~ar~~~ 346 (355) T cd03819 306 GETGLLVPPG--DAEALAQALDQILSLLPEGRAKMFAKARMCV 346 (355) T ss_pred CCCEEEECCC--CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH T ss_conf 9978998899--9999999999998699999999999999999 |
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.2e-16 Score=130.45 Aligned_cols=333 Identities=15% Similarity=0.155 Sum_probs=176.7 Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCC-CCCEEEEECCCCCCCCHHH-HHHHHHHCCCCCHHHHHHHHH Q ss_conf 52562079999999996598399995723767624446-8751687525656533123-321110001211013555420 Q gi|254781097|r 14 TGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFP-ADSIYEIVSSQVRFSNPFV-FWNSLVILWKAFIASLRLIKK 91 (369) Q Consensus 14 TGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~ii~~ 91 (369) T Consensus 13 ~GG~e~~~~~la~~L~~~G~~V~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~ 91 (377) T cd03798 13 NGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLAARALLK-LLKLKR 91 (377) T ss_pred CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHC T ss_conf 8949999999999999779969999537987531231257520003445455444331046677899999999-999746 Q ss_pred CCCCEEEECCCCCC-HHHHHHHHHCCCCCEE--ECCCCCCHH-------HHHHHHHHHHHHHCCCCCCCC-----CCCCC Q ss_conf 34442431265321-0247888623411012--215320015-------677889999987413432222-----35566 Q gi|254781097|r 92 LKPNVVVGFGGYHS-ISPLLAGMILRIPSMV--HEQNVIMGK-------ANRLLSWGVQIIARGLVSSQK-----KVLLR 156 (369) Q Consensus 92 ~kPDvVi~tGGy~s-~P~~iaA~~l~iP~vi--hEqN~v~G~-------~nk~l~~~a~~v~~~~~~~~~-----~~~~~ 156 (369) T Consensus 92 ~~~DvI~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~ 171 (377) T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKRLLRALLRRALRRADAVIAVSEALADELKALGIDPE 171 (377) T ss_pred CCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCC T ss_conf 99868997884067999999999739988999677414310231689999999998589999889899999998589965 Q ss_pred CCEEEECCCCHHHHHHHHHH-HHHHCC-CCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHH Q ss_conf 73253044432456543334-433114-478148986304322-210233344544323202466067762025516776 Q gi|254781097|r 157 KIIVTGNPIRSSLIKMKDIP-YQSSDL-DQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKV 233 (369) Q Consensus 157 k~~~~G~PvR~~~~~~~~~~-~~~~~~-~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~ 233 (369) T Consensus 172 ~i~vi~ngid~~~f~~~~~~~~~~~~~~~~~~-~i~~~Grl~~~Kg~~-~li~a~~~l~~~-~~~~~l~i~G~g~~~~~l 248 (377) T cd03798 172 KVTVIPNGVDTERFSPADRAEARKLGLPEDKK-VILFVGRLVPRKGID-YLIEALARLLKK-RPDVHLVIVGDGPLREAL 248 (377) T ss_pred CEEEECCCCCHHHCCCCCHHHHHHHCCCCCCE-EEEEEEECCCCCCCH-HHHHHHHHHHHH-CCCCEEEECCCCHHHHHH T ss_conf 59998897578754988777898608999985-999982452001828-999999998874-888522432682788899 Q ss_pred HHHHHHC--CCCCCCCCCCC--CCHHHHHCCCEEEECC----CCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHC Q ss_conf 5322100--11113454444--5144430044899725----42023334552960487533552489899989999988 Q gi|254781097|r 234 QKQYDEL--GCKATLACFFK--DIERYIVEANLLICRS----GALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEG 305 (369) Q Consensus 234 ~~~~~~~--~~~~~v~~f~~--~m~~~~~~aDlvIsra----G~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~ 305 (369) T Consensus 249 ~~~~~~~~l~~~v~~~g~v~~~~~~~~~~~adv~v~pS~~E~~~~~~lEama~G~PvI~~~~g--------g~~e~i~~~ 320 (377) T cd03798 249 EALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVG--------GIPEIITDG 320 (377) T ss_pred HHHHHHCCCCCEEEECCCEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCC--------CHHHHHCCC T ss_conf 999886188736986052100101013333774137855765125589999759979995899--------869985179 Q ss_pred CCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHH Q ss_conf 98899800019989999999998618999999999998527-8327999999999999 Q gi|254781097|r 306 GGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKG-KPQAVLMLSDLVEKLA 362 (369) Q Consensus 306 G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~-~~~aa~~i~~~i~~la 362 (369) T Consensus 321 ~~G~~~~~~--~~~~l~~~i~~l~~~~~~--~~~~~~~~~~~~~fs~~~~~~~~~~~y 374 (377) T cd03798 321 ENGLLVPPG--DPEALAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELY 374 (377) T ss_pred CEEEEECCC--CHHHHHHHHHHHHCCHHH--HHHHHHHHHHHHHCCHHHHHHHHHHHH T ss_conf 749997999--999999999999879999--999999999998699999999999998 |
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.3e-16 Score=131.38 Aligned_cols=313 Identities=19% Similarity=0.153 Sum_probs=173.7 Q ss_pred EEEEC-C-CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHH----HHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCC Q ss_conf 99987-8-85256207999999999659839999572376----762444687516875256565331233211100012 Q gi|254781097|r 7 ILLVA-G-GTGGHVFPAVALSHELKNRGYAVYLITDRRAR----SFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWK 80 (369) Q Consensus 7 ili~~-g-GTGGHi~palala~~L~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (369) T Consensus 2 IL~vi~~l~~GGaE~~~~~L~~~L~~~g~~v~v~~~~~~~~~~~~~~~~-~g~~v~~~~~---~~~~~----------~~ 67 (358) T cd03812 2 ILHIVGTMNRGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDYDDEIEK-LGGKIYYIPA---RKKNP----------LK 67 (358) T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH-CCCEEEECCC---CCCCH----------HH T ss_conf 8999499999118999999999998769989999987987636899997-5997999389---76428----------99 Q ss_pred CCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCE-EECCCCCC--HHHH---------HHHHHHHHH-HHCCCC Q ss_conf 1101355542034442431265321024788862341101-22153200--1567---------788999998-741343 Q gi|254781097|r 81 AFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSM-VHEQNVIM--GKAN---------RLLSWGVQI-IARGLV 147 (369) Q Consensus 81 ~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~v-ihEqN~v~--G~~n---------k~l~~~a~~-v~~~~~ 147 (369) T Consensus 68 ~~~~l~~~i~~~~~DiIh~h~~~~~~~~~~~~~~~~~~~~I~h~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iavS~~ 147 (358) T cd03812 68 YFKKLYKLIKKNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEE 147 (358) T ss_pred HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECHH T ss_conf 99999999998399999985750689999999985999899985787445431678999999999999869999995889 Q ss_pred C---CCCCCCCCCCEEEECCCCHHHHHHH---HHHHHHHCCCCCCEEEEEECCCC-CCCHHHHHHHHHHHHHHHCCCCCE Q ss_conf 2---2223556673253044432456543---33443311447814898630432-221023334454432320246606 Q gi|254781097|r 148 S---SQKKVLLRKIIVTGNPIRSSLIKMK---DIPYQSSDLDQPFHLLVFGGSQG-AKVFSDIVPKSIALIPEMQRKRLV 220 (369) Q Consensus 148 ~---~~~~~~~~k~~~~G~PvR~~~~~~~---~~~~~~~~~~~~~~ILv~GGS~G-a~~ln~~v~~~~~~l~~~~~~~~~ 220 (369) T Consensus 148 ~~~~l~~~~~~~ki~vI~NgId~~~~~~~~~~~~~~~~~~~~~~~~vi~~vGRl~~~Kg~-~~Li~A~~~l~~~-~~~~~ 225 (358) T cd03812 148 AGKWLFGKVKNKKFKVIPNGIDLEKFIFNEEIRKKRRELGILEDKFVIGHVGRFSEQKNH-EFLIEIFAELLKK-NPNAK 225 (358) T ss_pred HHHHHHHHCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHCC-HHHHHHHHHHHHH-CCCCE T ss_conf 999997316878789986980744238754668999983899898699996047665171-8899999986510-88823 Q ss_pred EEEEECCCCHHHHHHHHHHC--CCCCCCCCCCCCCHHHHHCCCEEEECC---C-CHHHHHHHHHCCCEEEEECCCCCCCH Q ss_conf 77620255167765322100--111134544445144430044899725---4-20233345529604875335524898 Q gi|254781097|r 221 IMQQVREDDKEKVQKQYDEL--GCKATLACFFKDIERYIVEANLLICRS---G-ALTVSEIAVIGRPAILVPYPHSVDQD 294 (369) Q Consensus 221 v~~~~g~~~~~~~~~~~~~~--~~~~~v~~f~~~m~~~~~~aDlvIsra---G-~~Ti~E~~~~g~P~IlIP~p~a~~~h 294 (369) T Consensus 226 l~ivG~G~~~~~l~~~i~~~~l~~~V~f~G~~~~~~~~~~~aDi~v~pS~~Egf~~v~lEAma~G~PVVasd~g----g- 300 (358) T cd03812 226 LLLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTI----T- 300 (358) T ss_pred EEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCEEEECCC----C- T ss_conf 99962752787899999982987249974670137899973989997487678847999999949989996599----9- Q ss_pred HHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC Q ss_conf 99989999988988998000199899999999986189999999999985278 Q gi|254781097|r 295 QLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGK 347 (369) Q Consensus 295 Q~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~ 347 (369) T Consensus 301 ----~~~ii~~~~~~l~~~~--~~~~~a~~I~~l~~~~~-~~~~~~~~~~~~~ 346 (358) T cd03812 301 ----KEVDLTDLVKFLSLDE--SPEIWAEEILKLKSEDR-RERSSESIKKKGL 346 (358) T ss_pred ----CCEEEECCCCEEECCC--CHHHHHHHHHHHHCCHH-HHHHHHHHHHCCC T ss_conf ----7469729955796899--99999999999865836-7999999998599 |
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.1e-16 Score=131.52 Aligned_cols=337 Identities=12% Similarity=0.095 Sum_probs=177.4 Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEECHHHHH---HHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH Q ss_conf 52562079999999996598399995723767---624446875168752565653312332111000121101355542 Q gi|254781097|r 14 TGGHVFPAVALSHELKNRGYAVYLITDRRARS---FITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLRLIK 90 (369) Q Consensus 14 TGGHi~palala~~L~~~g~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~ 90 (369) T Consensus 19 ~GG~e~~v~~La~~La~rGheV~V~t~~~~~~~~~~~~~~~gv~v~~~~~~p~~~~~~~~l~~~l~~~~~~~l~~~~~~~ 98 (405) T TIGR03449 19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGPYEGLDKEDLPTQLCAFTGGVLRAEARHE 98 (405) T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 58869999999999997899699993588877888467049849998257862324566769999999999999999856 Q ss_pred HCCCCEEEECCCCCC-HHHHHHHHHCCCCCEE--ECCCCC----C--H-----HHH----HHHHHHHHHHHCCCCCCCC- Q ss_conf 034442431265321-0247888623411012--215320----0--1-----567----7889999987413432222- Q gi|254781097|r 91 KLKPNVVVGFGGYHS-ISPLLAGMILRIPSMV--HEQNVI----M--G-----KAN----RLLSWGVQIIARGLVSSQK- 151 (369) Q Consensus 91 ~~kPDvVi~tGGy~s-~P~~iaA~~l~iP~vi--hEqN~v----~--G-----~~n----k~l~~~a~~v~~~~~~~~~- 151 (369) T Consensus 99 ~~~~DvIH~h~-~~~~~~~~~~~~~~~iP~V~t~H~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 177 (405) T TIGR03449 99 PGYYDLIHSHY-WLSGQVGWLLRDRWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARD 177 (405) T ss_pred CCCCCEEEECC-CCHHHHHHHHHHHCCCCEEEEECCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHH T ss_conf 89976899887-10789999999864999899814414313124432666441999999999997489999957899999 Q ss_pred -----CCCCCCCEEEECCCCHHHHHHH--HHHHHHHCCC-CCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHC-CCCCEE Q ss_conf -----3556673253044432456543--3344331144-78148986304322-210233344544323202-466067 Q gi|254781097|r 152 -----KVLLRKIIVTGNPIRSSLIKMK--DIPYQSSDLD-QPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQ-RKRLVI 221 (369) Q Consensus 152 -----~~~~~k~~~~G~PvR~~~~~~~--~~~~~~~~~~-~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~-~~~~~v 221 (369) T Consensus 178 l~~~~~~~~~ki~vi~nGvd~~~f~p~~~~~~r~~~g~~~~~~~il~v-GRl~~~Kg~~-~li~A~~~l~~~~p~~~l~~ 255 (405) T TIGR03449 178 LVRHYDADPDRIDVVAPGADLERFRPGDRATERARLGLPLDTKVVAFV-GRIQPLKAPD-VLLRAVAELLDRDPDRNLRV 255 (405) T ss_pred HHHHHCCCHHHEEEECCCCCCCEECCCCHHHHHHHCCCCCCCCEEEEE-CCCCHHHHHH-HHHHHHHHHHHHCCCCCEEE T ss_conf 999849886788997799770306888858999971989898189995-5885011489-99999999998689987899 Q ss_pred EEEECCC-----CHHHHHHHHHHC--CCCCCCCCCC--CCCHHHHHCCCEEEECC---C-CHHHHHHHHHCCCEEEEECC Q ss_conf 7620255-----167765322100--1111345444--45144430044899725---4-20233345529604875335 Q gi|254781097|r 222 MQQVRED-----DKEKVQKQYDEL--GCKATLACFF--KDIERYIVEANLLICRS---G-ALTVSEIAVIGRPAILVPYP 288 (369) Q Consensus 222 ~~~~g~~-----~~~~~~~~~~~~--~~~~~v~~f~--~~m~~~~~~aDlvIsra---G-~~Ti~E~~~~g~P~IlIP~p 288 (369) T Consensus 256 ~v~Gg~~g~~~~~~~~l~~~~~~lgl~~~V~f~G~~~~~~~~~~~~~adv~v~PS~~E~fg~~~lEAma~G~PVVas~~g 335 (405) T TIGR03449 256 IVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVG 335 (405) T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHCCCCEEEECCC T ss_conf 99838887536569999999998288875986799889999999995787635566678884799999869999991799 Q ss_pred CCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH Q ss_conf 524898999899999889889980001998999999999861899999999999852783279999999999998 Q gi|254781097|r 289 HSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLAH 363 (369) Q Consensus 289 ~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~la~ 363 (369) T Consensus 336 ----g----~~e~v~~g~~G~lv~~~--d~~~la~ai~~ll~d~~~~~~l~~~~~~~~~~fsw~~~a~~~~~vY~ 400 (405) T TIGR03449 336 ----G----LPVAVADGETGLLVDGH--DPADWADALARLLDDPRTRIRMGAAAVEHAAGFSWAATADGLLSSYR 400 (405) T ss_pred ----C----CCEEEECCCCEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH T ss_conf ----8----61125379738997989--99999999999975999999999999999996999999999999999 |
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-15 Score=128.65 Aligned_cols=324 Identities=15% Similarity=0.135 Sum_probs=175.5 Q ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCC--CCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHH Q ss_conf 885256207999999999659839999572376762444--687516875256565331233211100012110135554 Q gi|254781097|r 12 GGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDF--PADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLRLI 89 (369) Q Consensus 12 gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii 89 (369) T Consensus 14 GG~e~~---v~~La~~L~~~Gh~V~Vit~~~~~~~~~~~~~~g~~V~~~p~~~~~~~~~~~------~~~~~~~~~r~~~ 84 (398) T cd03796 14 GGVETH---IYQLSQCLIKRGHKVVVITHAYGNRVGIRYLTNGLKVYYLPFVVFYNQSTLP------TFFGTFPLLRNIL 84 (398) T ss_pred CCHHHH---HHHHHHHHHHCCCEEEEEECCCCCCCCCEEECCCCEEEECCCCCCCCCCHHH------HHHHHHHHHHHHH T ss_conf 977999---9999999997699899996899988774685388469975663345631167------7988899999999 Q ss_pred HHCCCCEEEECCCCCC--HHHHHHHHHCCCCCEE--ECC----CCCCHHHHHHH---HHHHHHH-HCCCCC---C--CCC Q ss_conf 2034442431265321--0247888623411012--215----32001567788---9999987-413432---2--223 Q gi|254781097|r 90 KKLKPNVVVGFGGYHS--ISPLLAGMILRIPSMV--HEQ----NVIMGKANRLL---SWGVQII-ARGLVS---S--QKK 152 (369) Q Consensus 90 ~~~kPDvVi~tGGy~s--~P~~iaA~~l~iP~vi--hEq----N~v~G~~nk~l---~~~a~~v-~~~~~~---~--~~~ 152 (369) T Consensus 85 ~~~~~DIIH~H~~~~~l~~~~~~~ar~~g~~~V~T~H~~~~~~~~~~~~~~~~~~~~l~~~d~vIavS~~~~e~~~~~~~ 164 (398) T cd03796 85 IRERITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSIHTNKLLRFSLADVDHVICVSHTSKENTVLRAS 164 (398) T ss_pred HHCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHC T ss_conf 76799889989626889999999987559978998344324463149999999999998579999997799999999848 Q ss_pred CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH Q ss_conf 556673253044432456543334433114478148986304322-2102333445443232024660677620255167 Q gi|254781097|r 153 VLLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKE 231 (369) Q Consensus 153 ~~~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~ 231 (369) T Consensus 165 ~~~~ki~vIpNGVd~~~f~p~~~----~~~~~~~~il~v-GRL~~~KG~-d~Li~A~~~l~~~-~p~~~lvIvGdGp~~~ 237 (398) T cd03796 165 LDPERVSVIPNAVDSSDFTPDPS----KRDNDKITIVVI-SRLVYRKGI-DLLVGIIPEICKK-HPNVRFIIGGDGPKRI 237 (398) T ss_pred CCCCCEEEECCCCCHHHCCCCCC----CCCCCCEEEEEE-CCCCCHHHH-HHHHHHHHHHHHH-CCCEEEEEECCCCCHH T ss_conf 99410999889574764488722----158898699997-067503009-9999999999965-8995999937871189 Q ss_pred HHHHHHHHC--CCCCCCCCCC--CCCHHHHHCCCEEEECC---C-CHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH Q ss_conf 765322100--1111345444--45144430044899725---4-20233345529604875335524898999899999 Q gi|254781097|r 232 KVQKQYDEL--GCKATLACFF--KDIERYIVEANLLICRS---G-ALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQ 303 (369) Q Consensus 232 ~~~~~~~~~--~~~~~v~~f~--~~m~~~~~~aDlvIsra---G-~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~ 303 (369) T Consensus 238 ~L~~l~~~~~l~~~V~flG~v~~~~l~~~~~~aDvfv~PS~~Egfglv~lEAmA~G~PVVat~----vgG----~~Evv- 308 (398) T cd03796 238 LLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTR----VGG----IPEVL- 308 (398) T ss_pred HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHCCCCEEECC----CCC----CCCEE- T ss_conf 999999872336728975888567778888774421276542466679999998399899888----998----61134- Q ss_pred HCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHH Q ss_conf 8898899800019989999999998618999999999998527832-79999999999998 Q gi|254781097|r 304 EGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQ-AVLMLSDLVEKLAH 363 (369) Q Consensus 304 ~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~-aa~~i~~~i~~la~ 363 (369) T Consensus 309 ~~~~~-~~~~~--d~~~la~~l~~ll~~~~~~~~~~~~~r~~v~~~fsw~~ia~~~~~vY~ 366 (398) T cd03796 309 PPDMI-LLAEP--DVESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSWEDVAKRTEKVYD 366 (398) T ss_pred ECCCE-EECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH T ss_conf 18936-87489--999999999999769999999999999999996999999999999999 |
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8e-16 Score=130.16 Aligned_cols=345 Identities=15% Similarity=0.122 Sum_probs=208.5 Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHH Q ss_conf 76999878852562079999999996598399995723767624446875168752565653312332111000121101 Q gi|254781097|r 5 NVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIA 84 (369) Q Consensus 5 ~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (369) T Consensus 2 ~ki~i~AGE~SGDll-Ga~LikaLk~~~~~~efvGvgG~~m~aeG~--~sl~~--~~elsvmGf~EVL~~lp~llk~~~~ 76 (381) T COG0763 2 LKIALSAGEASGDLL-GAGLIKALKARYPDVEFVGVGGEKMEAEGL--ESLFD--MEELSVMGFVEVLGRLPRLLKIRRE 76 (381) T ss_pred CEEEEEECCCCHHHH-HHHHHHHHHHHCCCEEEEEECCHHHHHCCC--CCCCC--HHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 459999044431146-899999998638983899817678886557--65558--8998782299999988999999999 Q ss_pred HHHHHHHCCCCEEEECCCCCCHHHHHHHHH--CC--CCCEEECCCCC----CHHHHHHHHHHHHHHHCCCCCCCCCC--C Q ss_conf 355542034442431265321024788862--34--11012215320----01567788999998741343222235--5 Q gi|254781097|r 85 SLRLIKKLKPNVVVGFGGYHSISPLLAGMI--LR--IPSMVHEQNVI----MGKANRLLSWGVQIIARGLVSSQKKV--L 154 (369) Q Consensus 85 ~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~--l~--iP~vihEqN~v----~G~~nk~l~~~a~~v~~~~~~~~~~~--~ 154 (369) T Consensus 77 ~~~~i~~~kpD~~i~ID-sPdFnl~vak~lrk~~p~i~iihYV~PsVWAWr~~Ra~-~i~~~~D~lLailPFE~~~y~k~ 154 (381) T COG0763 77 LVRYILANKPDVLILID-SPDFNLRVAKKLRKAGPKIKIIHYVSPSVWAWRPKRAV-KIAKYVDHLLAILPFEPAFYDKF 154 (381) T ss_pred HHHHHHHCCCCEEEEEC-CCCCCHHHHHHHHHHCCCCCEEEEECCCEEEECHHHHH-HHHHHHHHEEEECCCCHHHHHHC T ss_conf 99999855998899967-89886499999997089998699978530565521689-99997617214367788999855 Q ss_pred CCCCEEEECCCCHHHH--HHHHHHHHHHCC-CCCCEEEEEECCCCCCC--HHHHHHHHHHHHHHHCCCCCEEEEEECCCC Q ss_conf 6673253044432456--543334433114-47814898630432221--023334454432320246606776202551 Q gi|254781097|r 155 LRKIIVTGNPIRSSLI--KMKDIPYQSSDL-DQPFHLLVFGGSQGAKV--FSDIVPKSIALIPEMQRKRLVIMQQVREDD 229 (369) Q Consensus 155 ~~k~~~~G~PvR~~~~--~~~~~~~~~~~~-~~~~~ILv~GGS~Ga~~--ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~ 229 (369) T Consensus 155 g~~~~yVGHpl~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~-~~~~~~~vlp~~~~~ 233 (381) T COG0763 155 GLPCTYVGHPLADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKA-RYPDLKFVLPLVNAK 233 (381) T ss_pred CCCEEEECCHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH-HCCCCEEEEECCCHH T ss_conf 9970896780564234434578999982899778769981688588999877899999999986-589965999568478 Q ss_pred HHHHHHHHHHCC---CCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC Q ss_conf 677653221001---11134544445144430044899725420233345529604875335524898999899999889 Q gi|254781097|r 230 KEKVQKQYDELG---CKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGG 306 (369) Q Consensus 230 ~~~~~~~~~~~~---~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G 306 (369) T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~aD~al~aSGT~tL-E~aL~g~P~Vv~-Yk--~~~it~~iak~lvk~~ 307 (381) T COG0763 234 YRRIIEEALKWEVAGLSLILID--GEKRKAFAAADAALAASGTATL-EAALAGTPMVVA-YK--VKPITYFIAKRLVKLP 307 (381) T ss_pred HHHHHHHHHHCCCCCCEEEEEC--CHHHHHHHHHHHHHHHCCHHHH-HHHHHCCCEEEE-EE--CCHHHHHHHHHHCCCC T ss_conf 8999999862334576078407--4578999984189984467999-999829997999-94--4588999999861677 Q ss_pred CEE---------EE---EHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC---CCCH-HHHHHHHHHHHHHH Q ss_conf 889---------98---0001998999999999861899999999999852---7832-79999999999998 Q gi|254781097|r 307 GAK---------VI---TENFLSPERLAEELCSAMKKPSCLVQMAKQVSMK---GKPQ-AVLMLSDLVEKLAH 363 (369) Q Consensus 307 ~a~---------~i---~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~---~~~~-aa~~i~~~i~~la~ 363 (369) T Consensus 308 yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl~~~~ 380 (381) T COG0763 308 YVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQAVLELLL 380 (381) T ss_pred CCCCHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC T ss_conf 2443688618730467775316999999999998348676999999999999997589688999999998741 |
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-15 Score=127.74 Aligned_cols=331 Identities=17% Similarity=0.138 Sum_probs=175.5 Q ss_pred EEEEECC-----CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEEC--CCCCCCCHH-HHHHHHHH Q ss_conf 6999878-----852562079999999996598399995723767624446875168752--565653312-33211100 Q gi|254781097|r 6 VILLVAG-----GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVS--SQVRFSNPF-VFWNSLVI 77 (369) Q Consensus 6 ~ili~~g-----GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~l~~ 77 (369) T Consensus 1 rIl~vt~~~pP~~~GG~e~~~~~la~~L~~~Gh~V~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (359) T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKE-VIGVVVYGRPIDEVLRSALPRDLFHLSDY 79 (359) T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC-CCCEEEEECCCCCCCCCCCCCHHHHHHHH T ss_conf 99999486489997649999999999999779989999557987664213-57617970476420035431015677642 Q ss_pred C-CCCCHHHHHHHHHCCCCEEEECCCC-CCHHHHHHHHHCCCCCEE--ECCCCCCHHHHHHHHHHHHHHHCCCCCC---- Q ss_conf 0-1211013555420344424312653-210247888623411012--2153200156778899999874134322---- Q gi|254781097|r 78 L-WKAFIASLRLIKKLKPNVVVGFGGY-HSISPLLAGMILRIPSMV--HEQNVIMGKANRLLSWGVQIIARGLVSS---- 149 (369) Q Consensus 78 ~-~~~~~~~~~ii~~~kPDvVi~tGGy-~s~P~~iaA~~l~iP~vi--hEqN~v~G~~nk~l~~~a~~v~~~~~~~---- 149 (369) T Consensus 80 ~~~~~~~~~~~~~~~~~pDivh~h~~~~~~~~~~~~~~~~~~p~v~t~h~~~~~~~~~-~~~~~~~d~vi~~S~~~~~~~ 158 (359) T cd03823 80 DNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPRQ-GLFKKGGDAVIAPSRFLLDRY 158 (359) T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCHH-HHHHCCCCEEEECCHHHHHHH T ss_conf 2789999999999874999999888317679999999984998999972221106177-887458999999999999999 Q ss_pred -CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEEECC Q ss_conf -223556673253044432456543334433114478148986304322-210233344544323202466067762025 Q gi|254781097|r 150 -QKKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLVIMQQVRE 227 (369) Q Consensus 150 -~~~~~~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~ 227 (369) T Consensus 159 ~~~~~~~~~i~vI~ngvd~~~~~~~----~~~~~~~~~~i~~v-GRl~~~Kg~~-~li~a~~~l~~---~~~~l~i~G~g 229 (359) T cd03823 159 VANGLFAEKISVIRNGIDLDRAKRP----RRAPPGGRLRFGFI-GQLTPHKGVD-LLLEAFKRLPR---GDIELVIVGNG 229 (359) T ss_pred HHHCCCCCCEEEECCCCCHHHCCCC----CCCCCCCCEEEEEE-CCCCCCCCHH-HHHHHHHHCCC---CCCEEEEECCC T ss_conf 9808993238998898684542743----33456787499995-8897625999-99999985555---78289997786 Q ss_pred CCHHHHHHHHHHCCCCCCCCCCC--CCCHHHHHCCCEEEE--C---CCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH Q ss_conf 51677653221001111345444--451444300448997--2---5420233345529604875335524898999899 Q gi|254781097|r 228 DDKEKVQKQYDELGCKATLACFF--KDIERYIVEANLLIC--R---SGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAY 300 (369) Q Consensus 228 ~~~~~~~~~~~~~~~~~~v~~f~--~~m~~~~~~aDlvIs--r---aG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~ 300 (369) T Consensus 230 ~~~~~~~~-~~~~~~~v~f~G~~~~~~~~~~~~~adi~v~pS~~~E~fg~~~lEAma~G~PvIas~~----gg----~~e 300 (359) T cd03823 230 LELEEESY-ELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDI----GG----MAE 300 (359) T ss_pred CHHHHHHH-HHHCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCC----CC----CHH T ss_conf 05689999-9725776488065678999999986573656775657774799999982998998889----98----175 Q ss_pred HHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH Q ss_conf 9998898899800019989999999998618999999999998527832799999999999 Q gi|254781097|r 301 YLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKL 361 (369) Q Consensus 301 ~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~l 361 (369) T Consensus 301 ~i~~g~~G~lv~~~--d~~~la~ai~~ll~d~~~~~~~~~~~~~~~---s~~~~a~~~~~~ 356 (359) T cd03823 301 LVRDGVNGLLFPPG--DAEDLAAALERLIDDPDLLERLRAGIEPPR---SIEDQAEEYLKL 356 (359) T ss_pred HHCCCCCEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHCC---CHHHHHHHHHHH T ss_conf 60379867998999--999999999999849999999999999747---999999999998 |
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.7e-15 Score=123.69 Aligned_cols=316 Identities=13% Similarity=0.071 Sum_probs=160.6 Q ss_pred EEEEECC----CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC Q ss_conf 6999878----852562079999999996598399995723767624446875168752565653312332111000121 Q gi|254781097|r 6 VILLVAG----GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKA 81 (369) Q Consensus 6 ~ili~~g----GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (369) T Consensus 1 kIL~i~~~f~P~~GG~e~~~~~L~~~L~~~Gh~V~v~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~-~----- 71 (357) T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDEE--RNGHRVIRAPSLL-NVASTPFS-P----- 71 (357) T ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC--CCCCEEEECCCCC-CCCCCHHH-H----- T ss_conf 9999938289989829999999999999779989999827988776502--5884799877433-33442046-9----- Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEE--ECCCCCCHHHHH-------HHHHHHHHHHCCCCCCCC- Q ss_conf 1013555420344424312653210247888623411012--215320015677-------889999987413432222- Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMV--HEQNVIMGKANR-------LLSWGVQIIARGLVSSQK- 151 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vi--hEqN~v~G~~nk-------~l~~~a~~v~~~~~~~~~- 151 (369) T Consensus 72 ~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~ 151 (357) T cd03795 72 SFFKQLKKLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHSDIVKQKLLLKLYRPLQRRFLRRADAIVATSPNYAET 151 (357) T ss_pred HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHH T ss_conf 99999999725999999947635999999998579979999878853205679999999999998489999889999999 Q ss_pred ----CCCCCCCEEEECCCCHHHHHHHHHH-H-HHHCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEE Q ss_conf ----3556673253044432456543334-4-33114478148986304322-210233344544323202466067762 Q gi|254781097|r 152 ----KVLLRKIIVTGNPIRSSLIKMKDIP-Y-QSSDLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLVIMQQ 224 (369) Q Consensus 152 ----~~~~~k~~~~G~PvR~~~~~~~~~~-~-~~~~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v~~~ 224 (369) T Consensus 152 ~~~~~~~~~k~~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~i~-~vGrl~~~Kg~~-~li~a~~~l~---~--~~l~i~ 224 (357) T cd03795 152 SPVLRRFRDKVRVIPLGLDPARYPRPDALEEAIWRRAAGRPFFL-FVGRLVYYKGLD-VLLEAAAALP---D--APLVIV 224 (357) T ss_pred HHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEE-EEECCCHHCCCH-HHHHHHHHCC---C--EEEEEE T ss_conf 99844776768998897662336887367888740358997899-980780430957-8998987698---9--099999 Q ss_pred ECCCCHHHHHHHHHHC--CCCCCCCCCC--CCCHHHHHCCCEEE--EC---CC-CHHHHHHHHHCCCEEEEECCCCCCCH Q ss_conf 0255167765322100--1111345444--45144430044899--72---54-20233345529604875335524898 Q gi|254781097|r 225 VREDDKEKVQKQYDEL--GCKATLACFF--KDIERYIVEANLLI--CR---SG-ALTVSEIAVIGRPAILVPYPHSVDQD 294 (369) Q Consensus 225 ~g~~~~~~~~~~~~~~--~~~~~v~~f~--~~m~~~~~~aDlvI--sr---aG-~~Ti~E~~~~g~P~IlIP~p~a~~~h 294 (369) T Consensus 225 G~G~~~~~l~~~~~~~~~~~~V~f~G~~~~~~~~~~~~~adi~v~pS~~~~Egfg~~~lEAma~G~PVVat~~gg~---- 300 (357) T cd03795 225 GEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTG---- 300 (357) T ss_pred ECCCCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEECCHHCCCCCHHHHHHHHCCCCEEEECCCCC---- T ss_conf 5675422210005551875147525865145579886268789994640213566679999987998999359998---- Q ss_pred HHHHHHHH-HHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC Q ss_conf 99989999-988988998000199899999999986189999999999985278 Q gi|254781097|r 295 QLHNAYYL-QEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGK 347 (369) Q Consensus 295 Q~~NA~~l-~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~ 347 (369) T Consensus 301 ----~~~i~~~~~~G~l~~~~--d~~~l~~~i~~ll~~~~~~~~m~~~ar~~~~ 348 (357) T cd03795 301 ----GSYVNLHGVTGLVVPPG--DPAALAEAIRRLLEDPELRERLGEAARERAE 348 (357) T ss_pred ----HHHHEECCCEEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH T ss_conf ----15605569579997899--9999999999997799999999999999999 |
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.8e-14 Score=118.41 Aligned_cols=336 Identities=14% Similarity=0.082 Sum_probs=168.1 Q ss_pred EEEEECC--CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCC-CCCCCHHHHHHHHHHCCCCC Q ss_conf 6999878--85256207999999999659839999572376762444687516875256-56533123321110001211 Q gi|254781097|r 6 VILLVAG--GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQ-VRFSNPFVFWNSLVILWKAF 82 (369) Q Consensus 6 ~ili~~g--GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~ 82 (369) T Consensus 2 kI~fi~p~l~~GGaEr~v~~la~~L~~~Gh~V~v~t~~~d~~~~~~~~~~~~~~v~~~~~~~p~~~~~~~~~~~~~lr~~ 81 (392) T cd03805 2 RVAFIHPDLGIGGAERLVVDAALALQSRGHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDWLPRSIFGRFHILCAYLRML 81 (392) T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCEEEEEECCCCCCHHCCHHHHHHHHHHHH T ss_conf 89998699999869999999999999769939999726883324055517854899926746701212378999999999 Q ss_pred HHH--HHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCC--EEECCCCCC----HHHHHHH-----------HHHHHHHH Q ss_conf 013--5554203444243126532102478886234110--122153200----1567788-----------99999874 Q gi|254781097|r 83 IAS--LRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPS--MVHEQNVIM----GKANRLL-----------SWGVQIIA 143 (369) Q Consensus 83 ~~~--~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~--vihEqN~v~----G~~nk~l-----------~~~a~~v~ 143 (369) T Consensus 82 ~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~ii~~~H~p~~~l~~~~~~~~~~y~~~~~~le~~~~~~~d~ii 159 (392) T cd03805 82 YLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFYCHFPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIV 159 (392) T ss_pred HHHHHHHHHCCCCCEEEEECCCCHHHHH--HHHCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEE T ss_conf 9999998633479809998885347999--99746996799960784021026668999999999999999885088999 Q ss_pred CCCC-------CCCCCCCCCCCEEEECCCCHHHHHHHHHH---HHHHCCCCCCEEEEEECCCC-CCCHHHHHHHHHHHHH Q ss_conf 1343-------22223556673253044432456543334---43311447814898630432-2210233344544323 Q gi|254781097|r 144 RGLV-------SSQKKVLLRKIIVTGNPIRSSLIKMKDIP---YQSSDLDQPFHLLVFGGSQG-AKVFSDIVPKSIALIP 212 (369) Q Consensus 144 ~~~~-------~~~~~~~~~k~~~~G~PvR~~~~~~~~~~---~~~~~~~~~~~ILv~GGS~G-a~~ln~~v~~~~~~l~ 212 (369) T Consensus 160 ~~S~~~~~~~~~~~~~~~~~~~~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~il~v-gRl~~~Kg~-~~lI~A~~~l~ 237 (392) T cd03805 160 VNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDPDPGLLIPKSGKKTFLSI-NRFERKKNI-ALAIEAFAILK 237 (392) T ss_pred ECCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHCCCCCCCHHHHHHCCCCCCEEEEEE-ECCCCCCCH-HHHHHHHHHHH T ss_conf 9567899999998302065885797798477764876410445553246787399998-444534668-99999999999 Q ss_pred HHCC--CCCEEEEEECCC--------CHHHHHHHHH---HCCCCCCCCCCCCCC--HHHHHCCCEEEECC---C-CHHHH Q ss_conf 2024--660677620255--------1677653221---001111345444451--44430044899725---4-20233 Q gi|254781097|r 213 EMQR--KRLVIMQQVRED--------DKEKVQKQYD---ELGCKATLACFFKDI--ERYIVEANLLICRS---G-ALTVS 273 (369) Q Consensus 213 ~~~~--~~~~v~~~~g~~--------~~~~~~~~~~---~~~~~~~v~~f~~~m--~~~~~~aDlvIsra---G-~~Ti~ 273 (369) T Consensus 238 ~~~~~~~~~~Lvi~Gg~~~r~~e~~~y~~eL~~l~~~~~~l~~~V~Flg~~~~~~~~~l~~~ad~~v~~s~~Egfg~v~l 317 (392) T cd03805 238 DKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPL 317 (392) T ss_pred HHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHH T ss_conf 85676688599998187555510189999999999982598785999888996999999985979998874346660799 Q ss_pred HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC-CHHHH Q ss_conf 34552960487533552489899989999988988998000199899999999986189999999999985278-32799 Q gi|254781097|r 274 EIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGK-PQAVL 352 (369) Q Consensus 274 E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~-~~aa~ 352 (369) T Consensus 318 EAma~G~PVVasd~----gG----~~E~I~~g~~G~Lv~~---d~~~la~~i~~ll~d~~lr~~mg~~ar~~v~~~Fs~e 386 (392) T cd03805 318 EAMYAGKPVIACNS----GG----PLETVVDGETGFLCEP---TPEEFAEAMLKLANDPDLADRMGAAGRKRVKEKFSTE 386 (392) T ss_pred HHHHCCCCEEEECC----CC----CHHHEECCCEEEEECC---CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHH T ss_conf 99977999999489----98----6766457966999595---9999999999997899999999999999999866999 Q ss_pred HHHH Q ss_conf 9999 Q gi|254781097|r 353 MLSD 356 (369) Q Consensus 353 ~i~~ 356 (369) T Consensus 387 ~~a~ 390 (392) T cd03805 387 AFAE 390 (392) T ss_pred HHHH T ss_conf 9984 |
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.64 E-value=7e-14 Score=116.57 Aligned_cols=336 Identities=17% Similarity=0.188 Sum_probs=182.3 Q ss_pred EEECCCCHHHHHHHHHHHHHHHHCCCEEEEE----ECHHHHHHHCCCCC-CCEEEEECCCCCCCCHHHHHHHHHHC-CCC Q ss_conf 9987885256207999999999659839999----57237676244468-75168752565653312332111000-121 Q gi|254781097|r 8 LLVAGGTGGHVFPAVALSHELKNRGYAVYLI----TDRRARSFITDFPA-DSIYEIVSSQVRFSNPFVFWNSLVIL-WKA 81 (369) Q Consensus 8 li~~gGTGGHi~palala~~L~~~g~~v~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~ 81 (369) T Consensus 2 ~lSNGh--GEDl~a~~i~~~L~~~~p~~~v~alPLVG~G~ay~~~gi~iig~~~~lpSGGf~~~~~~~l~~Dl~~Gl~~~ 79 (396) T TIGR03492 2 FLSNGH--GEDLIAARIAKALLQLSPDLNLEALPLVGEGRAYQNLGIPIIGPTKELPSGGFSYQSLRGLLRDLRAGLVGL 79 (396) T ss_pred CCCCCC--HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 406763--588999999999996299996698513478499997899487466435774622436778999997036999 Q ss_pred CHHHHHHHH--HCCCCEEEECCCCCCHHHHHHHHHCCCCCEEEC---CCCC----CHHH--H--------------HHHH Q ss_conf 101355542--034442431265321024788862341101221---5320----0156--7--------------7889 Q gi|254781097|r 82 FIASLRLIK--KLKPNVVVGFGGYHSISPLLAGMILRIPSMVHE---QNVI----MGKA--N--------------RLLS 136 (369) Q Consensus 82 ~~~~~~ii~--~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihE---qN~v----~G~~--n--------------k~l~ 136 (369) T Consensus 80 ~~~q~~~~~~~~~~~~~ilavGD~--~pl-~~A~~sg~p~~~~~~~~S~yy~~~~~~~~~~~~~~~~~g~~~~Pwe~~lm 156 (396) T TIGR03492 80 TLGQWRALRKWAKKGDLIVAVGDI--VPL-LFAWLSGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPWERWLM 156 (396) T ss_pred HHHHHHHHHHHCCCCCEEEEECCH--HHH-HHHHHCCCCCEEEEECCCCEEEECCCCCCCHHHHHCCCEEECCHHHHHHH T ss_conf 999999999854458879996671--888-99998189816997045323660687753012332155178167799974 Q ss_pred --HHHHHHHCCCCCCCCCCC--CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH--HHHHHHHHH Q ss_conf --999987413432222355--66732530444324565433344331144781489863043222102--333445443 Q gi|254781097|r 137 --WGVQIIARGLVSSQKKVL--LRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGAKVFS--DIVPKSIAL 210 (369) Q Consensus 137 --~~a~~v~~~~~~~~~~~~--~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~ln--~~v~~~~~~ 210 (369) T Consensus 157 ~~~rc~~Vf~RD~lTA~~L~~~gi~a~f~GnPmMD~l~~~----~~~~~~~~~~~I~LLPGSR~pEa~~nl~~~L~a~~~ 232 (396) T TIGR03492 157 RSRRCLAVFVRDRLTARDLRRQGVRASYLGNPMMDGLEPP----ERKPLLTGRFRIALLPGSRPPEAYRNLKLLLRALEA 232 (396) T ss_pred CCCCCCEEECCCHHHHHHHHHCCCCEEEECCCHHCCCCCC----CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH T ss_conf 0966529950558879999977996496087341378888----876678878679995898859999879999999996 Q ss_pred HHHHCCCCCEEEE-EECCCCHHHHHHHHHHCC----------------CCCCCCCCCCCCHHHHHCCCEEEECCCCHHHH Q ss_conf 2320246606776-202551677653221001----------------11134544445144430044899725420233 Q gi|254781097|r 211 IPEMQRKRLVIMQ-QVREDDKEKVQKQYDELG----------------CKATLACFFKDIERYIVEANLLICRSGALTVS 273 (369) Q Consensus 211 l~~~~~~~~~v~~-~~g~~~~~~~~~~~~~~~----------------~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~ 273 (369) T Consensus 233 l~~~~--~~~f~~alap~l~~~~l~~~l~~~Gw~~~~~~~~~~~~~~~~~~~v~~~~~~f~~~l~~adl~ia~AGTAte- 309 (396) T TIGR03492 233 LPDSQ--PFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADLGIAMAGTATE- 309 (396) T ss_pred HCCCC--CEEEEEEECCCCCHHHHHHHHHHCCCEECCCCCCCCHHEECCCEEEEEECCCHHHHHHHCHHHHHCCCCHHH- T ss_conf 34148--869999868999989999999965970057865420001048768999738489999855114443770999- Q ss_pred HHHHHCCCEEEEECCCCCCCHHHH--HHHHHHH-CCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH-HHCCCCH Q ss_conf 345529604875335524898999--8999998-89889980001998999999999861899999999999-8527832 Q gi|254781097|r 274 EIAVIGRPAILVPYPHSVDQDQLH--NAYYLQE-GGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQV-SMKGKPQ 349 (369) Q Consensus 274 E~~~~g~P~IlIP~p~a~~~hQ~~--NA~~l~~-~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~-~~~~~~~ 349 (369) T Consensus 310 Q~vgLG~Pvv~l~g~----GPQfT~~fA~~Q~RLLG~sv~~~--~~~p~~ia~~~~~lL~d~~~~~~~~~~gr~RlG~~G 383 (396) T TIGR03492 310 QAVGLGKPVIQLPGK----GPQFTYGFAEAQSRLLGGSVFLA--SKNPEQAAQVVRQLLADPELLERCRRNGQERMGPPG 383 (396) T ss_pred HHHHCCCCEEEECCC----CCHHHHHHHHHHHHHCCCEEEEC--CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC T ss_conf 998718987997278----72777999999998627533526--899999999999985499999999999998558865 Q ss_pred HHHHHHHHHHHH Q ss_conf 799999999999 Q gi|254781097|r 350 AVLMLSDLVEKL 361 (369) Q Consensus 350 aa~~i~~~i~~l 361 (369) T Consensus 384 as~RiA~~il~~ 395 (396) T TIGR03492 384 ASARIAESILKQ 395 (396) T ss_pred HHHHHHHHHHHH T ss_conf 889999999951 |
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.7e-12 Score=105.51 Aligned_cols=326 Identities=13% Similarity=0.071 Sum_probs=168.4 Q ss_pred CCEEEEECC---CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCC-CCCCEEEEECCCCCCCCHHHHHHHHHHCC Q ss_conf 876999878---85256207999999999659839999572376762444-68751687525656533123321110001 Q gi|254781097|r 4 NNVILLVAG---GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDF-PADSIYEIVSSQVRFSNPFVFWNSLVILW 79 (369) Q Consensus 4 ~~~ili~~g---GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 79 (369) T Consensus 2 ~MKIlfi~~~l~~~GGaErvl~~La~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~-------~~~~~ 72 (361) T PRK09922 2 KMKIAFIGEAVSGFGGMETVISNVINTFENSKINCEMFFFCRNDKMDKAWLKKIKYA-QSFSN-IKLS-------FLRRA 72 (361) T ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCE-EECCC-CCCC-------HHHHH T ss_conf 709999999999988049999999999987199879999934985415576447722-43366-5520-------24578 Q ss_pred CCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCC--EEECCCCCCHH--HHHHHHHHHHHH-HCCC--CC--CC Q ss_conf 2110135554203444243126532102478886234110--12215320015--677889999987-4134--32--22 Q gi|254781097|r 80 KAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPS--MVHEQNVIMGK--ANRLLSWGVQII-ARGL--VS--SQ 150 (369) Q Consensus 80 ~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~--vihEqN~v~G~--~nk~l~~~a~~v-~~~~--~~--~~ 150 (369) T Consensus 73 ~~~~~l~~~ik~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~ii~~~h~~~~~~~~~~~~~~~~~d~~i~vS~~~~~~~~~ 152 (361) T PRK09922 73 KHVYNFSQWLKETSPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAECITLVYADYHLAISSGIKEQMIA 152 (361) T ss_pred HHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHHH T ss_conf 99999999999709999999880689999999998299958999755653426789989998588569957899999997 Q ss_pred CCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCC---CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC Q ss_conf 235566732530444324565433344331144781489863043---22210233344544323202466067762025 Q gi|254781097|r 151 KKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQ---GAKVFSDIVPKSIALIPEMQRKRLVIMQQVRE 227 (369) Q Consensus 151 ~~~~~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~---Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~ 227 (369) T Consensus 153 ~~~~~~ki~vI~N~i~~~~-----~~~~~~~~~~~~~il~vG-Rl~~~~qK~~----~~li~a~~~~~-~~~~L~IvG~G 221 (361) T PRK09922 153 RGISAQRISVIYNPVEIKT-----IIIPPPERDKPAVFLYVG-RLKFEGQKNV----KELFDGLSRTT-GEWQLHIIGDG 221 (361) T ss_pred CCCCHHCEEEEECCCCHHH-----CCCCCHHHCCCCEEEEEE-CCCCCCCCCH----HHHHHHHHHHC-CCCEEEEEEEE T ss_conf 0997542999959917354-----046750315787799995-4445256899----99999998548-99489999843 Q ss_pred CCHHHHHHHHHHCC--CCCCCCCCCCC----CHHHHHCCCEEE--ECC-C-CHHHHHHHHHCCCEEEEECCCCCCCHHHH Q ss_conf 51677653221001--11134544445----144430044899--725-4-20233345529604875335524898999 Q gi|254781097|r 228 DDKEKVQKQYDELG--CKATLACFFKD----IERYIVEANLLI--CRS-G-ALTVSEIAVIGRPAILVPYPHSVDQDQLH 297 (369) Q Consensus 228 ~~~~~~~~~~~~~~--~~~~v~~f~~~----m~~~~~~aDlvI--sra-G-~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~ 297 (369) T Consensus 222 ~~~~~L~~~i~~l~l~~~V~flG~~~np~~~l~~~~~~adifVl~S~~EGfp~vllEAma~G~PvIatd~~~---G---- 294 (361) T PRK09922 222 SDFEKCKAYSRELGIEQRIIWHGWQSNPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMS---G---- 294 (361) T ss_pred CCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHCCCEEEECCCC---C---- T ss_conf 889999999998389873899067598799999998513499964755688728999999599899975999---9---- Q ss_pred HHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHH--HHHHHHCCCCHHHHHHHHHH Q ss_conf 89999988988998000199899999999986189999999--99998527832799999999 Q gi|254781097|r 298 NAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQM--AKQVSMKGKPQAVLMLSDLV 358 (369) Q Consensus 298 NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m--~~~~~~~~~~~aa~~i~~~i 358 (369) T Consensus 295 ~~EiI~dg~nG~Lv~~~d--~~~la~~i~~li~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (361) T PRK09922 295 PRDIIKPGLNGELYTPGN--IDEFVGKLNKVISGEVKYQHDIIPGSIEKFYDVLYFKNLNNAL 355 (361) T ss_pred CHHHHCCCCCEEEECCCC--HHHHHHHHHHHHHCHHHCCHHHHHHHHHHHCHHHHHHHHHHHH T ss_conf 088715898379977999--9999999999984822139999999998646899999999999 |
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.60 E-value=4e-11 Score=97.28 Aligned_cols=321 Identities=15% Similarity=0.147 Sum_probs=179.7 Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCC--CEEEEEE-CHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC Q ss_conf 7699987885256207999999999659--8399995-723767624446875168752565653312332111000121 Q gi|254781097|r 5 NVILLVAGGTGGHVFPAVALSHELKNRG--YAVYLIT-DRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKA 81 (369) Q Consensus 5 ~~ili~~gGTGGHi~palala~~L~~~g--~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (369) T Consensus 50 ~~IW~HaaS-vGE~~~~~pli~~l~~~~p~~~ilvTt~T~sg~~~~~~~~~~~~~~~y-l------P~----------D~ 111 (423) T PRK05749 50 PLIWFHAVS-VGETRAAIPLIRALRKRYPDLPILVTTMTPTGSERAKALFGDDVEHVY-L------PY----------DL 111 (423) T ss_pred CEEEEEECC-HHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEE-E------CC----------CC T ss_conf 859998287-989999999999999629997499983783099999986689737999-2------24----------78 Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCHHHH-HHHHHCCCCCEEECCCCCCHH-H-H--HHHHHHHHHHHCCCCC-------C Q ss_conf 1013555420344424312653210247-888623411012215320015-6-7--7889999987413432-------2 Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGYHSISPL-LAGMILRIPSMVHEQNVIMGK-A-N--RLLSWGVQIIARGLVS-------S 149 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy~s~P~~-iaA~~l~iP~vihEqN~v~G~-~-n--k~l~~~a~~v~~~~~~-------~ 149 (369) T Consensus 112 ~~~~~rfl~~~~P~~~i~~E~E-iWPnli~~~~~~~Ip~~li--NaR~s~~S~~~y~~~~~~~~~~l~~~~~i~~qs~~~ 188 (423) T PRK05749 112 PFAVRRFLRFWRPKLLIIMETE-LWPNLIAEAKKRGIPLVLA--NARLSERSFKRYAKFKRFYRLLFKNIDLVLAQSEED 188 (423) T ss_pred HHHHHHHHHHHCCCEEEEEECC-CCHHHHHHHHHCCCCEEEE--CCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHH T ss_conf 7999999997398879986203-1088999996278866765--251163367666766999999997427665269999 Q ss_pred CC---CC-CCCCCEEEECCCCHHHH----HHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE Q ss_conf 22---35-56673253044432456----543334433114478148986304322210233344544323202466067 Q gi|254781097|r 150 QK---KV-LLRKIIVTGNPIRSSLI----KMKDIPYQSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVI 221 (369) Q Consensus 150 ~~---~~-~~~k~~~~G~PvR~~~~----~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v 221 (369) T Consensus 189 ~~r~~~lG~~~~v~v~Gnl-Kfd~~~~~~~~~~~~~~~~~~~~~~-v~v-agSth~~EE-~iil~~~~~l~~~~-~~~~l 263 (423) T PRK05749 189 AERFLALGAKNEVTVTGNL-KFDIEIPPELAARAAALRRQLPNRP-VWI-AASTHEGEE-ELVLDAHQALLKQF-PNLLL 263 (423) T ss_pred HHHHHHCCCCCCEEECCCC-CCCCCCCHHHHHHHHHHHHHHCCCC-EEE-EEECCHHHH-HHHHHHHHHHHHCC-CCCEE T ss_conf 9999975999743876863-2245787110788999999818996-899-992887699-99999999997408-78289 Q ss_pred EEEECCCCH---HHHHHHHHHCCCC---------------CCCCCCCCCCHHHHHCCCEEEE------CCCCHHHHHHHH Q ss_conf 762025516---7765322100111---------------1345444451444300448997------254202333455 Q gi|254781097|r 222 MQQVREDDK---EKVQKQYDELGCK---------------ATLACFFKDIERYIVEANLLIC------RSGALTVSEIAV 277 (369) Q Consensus 222 ~~~~g~~~~---~~~~~~~~~~~~~---------------~~v~~f~~~m~~~~~~aDlvIs------raG~~Ti~E~~~ 277 (369) T Consensus 264 Iia--PRHpeR~~~i~~~l~~~gl~~~~~S~~~~~~~~~~Vli~Dt~GeL~~~Y~~a~iafvGGsf~~~GGHN~l-Epa~ 340 (423) T PRK05749 264 ILV--PRHPERFKEVEELLKKAGLSYVRRSQGEAPSADTDVLLGDTMGELGLLYAIADIAFVGGSLVKIGGHNPL-EPAA 340 (423) T ss_pred EEE--CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCEEEECCCCCCCCCCCHH-HHHH T ss_conf 994--7877679999999996799779827999999887299988887588999857878982776888995979-9998 Q ss_pred HCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC--CCCHHHHHHH Q ss_conf 29604875335524898999899999889889980001998999999999861899999999999852--7832799999 Q gi|254781097|r 278 IGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMK--GKPQAVLMLS 355 (369) Q Consensus 278 ~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~--~~~~aa~~i~ 355 (369) T Consensus 341 ~g~pvi~GP~---~~nf-~e~~~~L~~~g~~~~v~----~~~eL~~~~~~ll~~~~~~~~~~~~a~~~v~~~~Gat~r~~ 412 (423) T PRK05749 341 FGVPVISGPH---TFNF-KEIFERLLQAGAAIQVE----DAEDLAKAVSSLLTDPDAREAMGEAGVAFLKQNRGALQRTL 412 (423) T ss_pred CCCCEEECCC---CCCH-HHHHHHHHHCCCEEEEC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHH T ss_conf 3998899938---3277-99999999789958968----99999999999976999999999999999997847999999 Q ss_pred HHHHHHH Q ss_conf 9999999 Q gi|254781097|r 356 DLVEKLA 362 (369) Q Consensus 356 ~~i~~la 362 (369) T Consensus 413 ~~i~~~L 419 (423) T PRK05749 413 QLLKPYL 419 (423) T ss_pred HHHHHHC T ss_conf 9999763 |
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.6e-13 Score=110.85 Aligned_cols=331 Identities=14% Similarity=0.128 Sum_probs=181.1 Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHC-CCEEEEE-ECHHHH-------HHHCCCCCCCE-EEEECCCCCCCCHHHHHHH Q ss_conf 769998788525620799999999965-9839999-572376-------76244468751-6875256565331233211 Q gi|254781097|r 5 NVILLVAGGTGGHVFPAVALSHELKNR-GYAVYLI-TDRRAR-------SFITDFPADSI-YEIVSSQVRFSNPFVFWNS 74 (369) Q Consensus 5 ~~ili~~gGTGGHi~palala~~L~~~-g~~v~~~-~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 74 (369) T Consensus 1 kKI~~v~G-tRpe~iklapli~~l~~~~~~~~~li~TGqH~~~~~g~t~~~i~~-d~~~~~~~~~-~~~~~~~~~~~~~~ 77 (365) T TIGR03568 1 KKICVVTG-TRADYGLLRPLLKALQDDPDLELQLIVTGMHLSPEYGNTVNEIEK-DGFDIDEKIE-ILLDSDSNAGMAKS 77 (365) T ss_pred CEEEEEEE-CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCHHHHHHH-CCCCCCCCCC-CCCCCCCCCCHHHH T ss_conf 94999985-077299999999999728998889999077784110708999997-5798765576-54568985339999 Q ss_pred HHHCCCCCHHHHHHHHHCCCCEEEECCC-CCCHHHHHHHHHCCCCCEEECC-----CCCCHHHHHHHHHHHHHHHCCCCC Q ss_conf 1000121101355542034442431265-3210247888623411012215-----320015677889999987413432 Q gi|254781097|r 75 LVILWKAFIASLRLIKKLKPNVVVGFGG-YHSISPLLAGMILRIPSMVHEQ-----NVIMGKANRLLSWGVQIIARGLVS 148 (369) Q Consensus 75 l~~~~~~~~~~~~ii~~~kPDvVi~tGG-y~s~P~~iaA~~l~iP~vihEq-----N~v~G~~nk~l~~~a~~v~~~~~~ 148 (369) T Consensus 78 ---~~~~~~~~~~~l~~~kPD~VlV~GDt~stla~alaA~~~~Ipv~HveaGlrs~~~~dE~~R~~i~~lS~~hf~~t~~ 154 (365) T TIGR03568 78 ---MGLTIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVTEGAIDESIRHAITKLSHLHFVATEE 154 (365) T ss_pred ---HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHH T ss_conf ---99999999999854399899994898607799999998198189996786458988658888989987777323357 Q ss_pred CCCC-----CCCCCCEEEECCCCHHHHHHHH----HHHHHHCCC-CCCEEEEEEC--CCCCCCHHHHHHHHHHHHHHHCC Q ss_conf 2223-----5566732530444324565433----344331144-7814898630--43222102333445443232024 Q gi|254781097|r 149 SQKK-----VLLRKIIVTGNPIRSSLIKMKD----IPYQSSDLD-QPFHLLVFGG--SQGAKVFSDIVPKSIALIPEMQR 216 (369) Q Consensus 149 ~~~~-----~~~~k~~~~G~PvR~~~~~~~~----~~~~~~~~~-~~~~ILv~GG--S~Ga~~ln~~v~~~~~~l~~~~~ 216 (369) T Consensus 155 a~~nL~~eG~~~~~I~~vGn~~iD~l~~~~~~~~~~~~~~~~~~~~~~~~LvT~Hp~~~~~~~~~~~l~~il~al~~~~- 233 (365) T TIGR03568 155 YRQRVIQMGEDPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDELN- 233 (365) T ss_pred HHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHC- T ss_conf 8899986247867089827718999862221378899987412136876999953532566568999999999997208- Q ss_pred CCCEEEEEECCCCHHHHH---HHHHHCCCCCCCCCC--CCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCC Q ss_conf 660677620255167765---322100111134544--445144430044899725420233345529604875335524 Q gi|254781097|r 217 KRLVIMQQVREDDKEKVQ---KQYDELGCKATLACF--FKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSV 291 (369) Q Consensus 217 ~~~~v~~~~g~~~~~~~~---~~~~~~~~~~~v~~f--~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~ 291 (369) T Consensus 234 ~~~~~i~Pn~d~~~~~i~~~i~~~~~~~~ni~~i~pl~y~~fl~ll~~a~~vitdSsggi~-Ea~~l~~P~i~i~----- 307 (365) T TIGR03568 234 KNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNSSSGII-EAPSFGVPTINIG----- 307 (365) T ss_pred CCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCEEEECCCCCEE-EECCCCCCEEEEC----- T ss_conf 8817982698602788999999997079988996678889999999870199985886546-7010498678837----- Q ss_pred CCHHHHHHHHHHHCCCEEE-EEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH Q ss_conf 8989998999998898899-800019989999999998618999999999998527832799999999 Q gi|254781097|r 292 DQDQLHNAYYLQEGGGAKV-ITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLV 358 (369) Q Consensus 292 ~~hQ~~NA~~l~~~G~a~~-i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i 358 (369) T Consensus 308 -~Rq~~r-----~~~~nvi~v~---~~~~~I~~ai~~~~-~~~~~~~~~~~~npyGDG~as~rIv~iL 365 (365) T TIGR03568 308 -TRQKGR-----LRADSVIDVD---PDKEEIVKAIEKLL-DPAFKKSLKNVKNPYGDGNSSERIIEIL 365 (365) T ss_pred -CCCCCC-----CCCCEEEEEC---CCHHHHHHHHHHHH-CHHHHHHHHCCCCCCCCCHHHHHHHHHC T ss_conf -885555-----2476089817---99999999999974-8789875530899896998999999869 |
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.7e-12 Score=103.80 Aligned_cols=323 Identities=13% Similarity=0.098 Sum_probs=157.8 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHH---HHHHHHHHCCCCC Q ss_conf 6999878852562079999999996598399995723767624446875168752565653312---3321110001211 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPF---VFWNSLVILWKAF 82 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~ 82 (369) T Consensus 1 ~~~~~~~~~p~q~---r~LA~~La~rGHeV~Vit~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (396) T cd03818 1 RILFVHQNFPGQF---RHLAPALAAQGHEVVFLTEPNAAPPP---GGVRVVRYRPPRGPTSGTHPYLREFEEAVLRGQAV 74 (396) T ss_pred CEEEECCCCCHHH---HHHHHHHHHCCCEEEEEECCCCCCCC---CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH T ss_conf 9899889988169---99999999789989999689998899---97268885336888777773234478888878999 Q ss_pred HHH-HHHH-HHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEE-----CC-CCCCHH----------HHHHHHH------- Q ss_conf 013-5554-203444243126532102478886234110122-----15-320015----------6778899------- Q gi|254781097|r 83 IAS-LRLI-KKLKPNVVVGFGGYHSISPLLAGMILRIPSMVH-----EQ-NVIMGK----------ANRLLSW------- 137 (369) Q Consensus 83 ~~~-~~ii-~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vih-----Eq-N~v~G~----------~nk~l~~------- 137 (369) T Consensus 75 ~~~~~~~~~~~~~PDvVh~H~~~~-~~l~l~~~~p~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (396) T cd03818 75 ARALLALRAKGFRPDVIVAHPGWG-ETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLA 153 (396) T ss_pred HHHHHHHHHCCCCCCEEEECCCHH-HHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH T ss_conf 999999997189998899887058-9999998565687887641241036544677833365566899999988888888 Q ss_pred --HHHHHHCCCCCCCC---CCCCCCCEEEECCCCHHHHHHHHHHHH----HHC-CCCCCEEEEEECCCCC-CCHHHHHHH Q ss_conf --99987413432222---355667325304443245654333443----311-4478148986304322-210233344 Q gi|254781097|r 138 --GVQIIARGLVSSQK---KVLLRKIIVTGNPIRSSLIKMKDIPYQ----SSD-LDQPFHLLVFGGSQGA-KVFSDIVPK 206 (369) Q Consensus 138 --~a~~v~~~~~~~~~---~~~~~k~~~~G~PvR~~~~~~~~~~~~----~~~-~~~~~~ILv~GGS~Ga-~~ln~~v~~ 206 (369) T Consensus 154 ~~~ad~~v~~s~~~~~~~~~~~~~~i~VipnGVD~~~f~P~~~a~~~~~~~~~~~~~~~vvl~vGR~l~~~KG~~~-Ll~ 232 (396) T cd03818 154 LAQADAGVSPTRWQRSTFPAELRSRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGDEVITFVARNLEPYRGFHV-FMR 232 (396) T ss_pred HHHCCEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHH-HHH T ss_conf 9848788718899997526762483799826877133388804555442114689998699997765130448999-999 Q ss_pred HHHHHHHHCCCCCEEEEEECCC--------C----HHHHHHHHHHCC--CCCCCCCCC--CCCHHHHHCCCEEE--ECCC Q ss_conf 5443232024660677620255--------1----677653221001--111345444--45144430044899--7254 Q gi|254781097|r 207 SIALIPEMQRKRLVIMQQVRED--------D----KEKVQKQYDELG--CKATLACFF--KDIERYIVEANLLI--CRSG 268 (369) Q Consensus 207 ~~~~l~~~~~~~~~v~~~~g~~--------~----~~~~~~~~~~~~--~~~~v~~f~--~~m~~~~~~aDlvI--sraG 268 (369) T Consensus 233 A~~~l~~~-~p~~~lvivG~~~~~~g~~~~~~~~~~~~ll~~l~~~~~~~rV~F~G~v~~~~l~~~l~~adv~v~PS~~~ 311 (396) T cd03818 233 ALPRLLRA-RPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYLALLQVSDVHVYLTYPF 311 (396) T ss_pred HHHHHHHH-CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHEEEEEEECCEEC T ss_conf 99999987-89968999926874456667654379999998632236763689708985899988751003999531404 Q ss_pred CH--HHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC Q ss_conf 20--2333455296048753355248989998999998898899800019989999999998618999999999998527 Q gi|254781097|r 269 AL--TVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKG 346 (369) Q Consensus 269 ~~--Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~ 346 (369) T Consensus 312 ~~~~~llEAMA~G~PVVas~----~gg----~~e~V~dg~~G~Lvpp~d--~~~LA~ai~~lL~dp~~r~~lg~aaR~~~ 381 (396) T cd03818 312 VLSWSLLEAMACGCLVVGSD----TAP----VREVITDGENGLLVDFFD--PDALAAAVIELLDDPARRARLRRAARRTA 381 (396) T ss_pred CCCCHHHHHHHCCCCEEEEC----CCC----CHHHHCCCCCEEEECCCC--HHHHHHHHHHHHCCHHHHHHHHHHHHHHH T ss_conf 55760899997799899927----998----265525998789969999--99999999999759999999999999999 Q ss_pred C Q ss_conf 8 Q gi|254781097|r 347 K 347 (369) Q Consensus 347 ~ 347 (369) T Consensus 382 ~ 382 (396) T cd03818 382 L 382 (396) T ss_pred H T ss_conf 9 |
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.4e-12 Score=104.79 Aligned_cols=316 Identities=15% Similarity=0.076 Sum_probs=153.4 Q ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHH-CCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH Q ss_conf 885256207999999999659839999572376762-4446875168752565653312332111000121101355542 Q gi|254781097|r 12 GGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFI-TDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLRLIK 90 (369) Q Consensus 12 gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~ 90 (369) T Consensus 15 GG~e~~---v~~La~~L~~~Gh~V~v~t~~~~~~~~~~~~~gv~~~~~~---~~~~~~~~~---~~~---~~~~-~~~~~ 81 (363) T cd04955 15 GGFETF---VEELAPRLVARGHEVTVYCRSPYPKQKETEYNGVRLIHIP---APEIGGLGT---IIY---DILA-ILHAL 81 (363) T ss_pred CCHHHH---HHHHHHHHHHCCCEEEEEECCCCCCCCCEEECCEEEEEEC---CCCCCCHHH---HHH---HHHH-HHHHH T ss_conf 878999---9999999997799799998789888875134777999927---644451677---898---9999-99998 Q ss_pred HCCCCEEEEC-CCCCCHHHHHHHHHCCCCCEEECCCC---C--CHH-HHHHH-------HHHHHHHHCCCCCCCC---CC Q ss_conf 0344424312-65321024788862341101221532---0--015-67788-------9999987413432222---35 Q gi|254781097|r 91 KLKPNVVVGF-GGYHSISPLLAGMILRIPSMVHEQNV---I--MGK-ANRLL-------SWGVQIIARGLVSSQK---KV 153 (369) Q Consensus 91 ~~kPDvVi~t-GGy~s~P~~iaA~~l~iP~vihEqN~---v--~G~-~nk~l-------~~~a~~v~~~~~~~~~---~~ 153 (369) T Consensus 82 ~~~~d~~~~h~~~~~~~~~~~~~~~~~~~~v~t~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~~ 161 (363) T cd04955 82 FVKRDIDHVHALGPAIAPFLPLLRLKGKKVVVNMDGLEWKRAKWGRPAKRYLKFGEKLAVKFADRLIADSPGIKEYLKEK 161 (363) T ss_pred HHCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHH T ss_conf 60899899997781689999999733983999936740113220178999999999999860899999988999999986 Q ss_pred CCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHH Q ss_conf 56673253044432456543334433114478148986304322-21023334454432320246606776202551677 Q gi|254781097|r 154 LLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEK 232 (369) Q Consensus 154 ~~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~ 232 (369) T Consensus 162 ~~~~~~vIpnGvd~~~~~~~~~~~~~~~~~~~~~il~v-gRl~~~Kg~~-~ll~A~~~l~~--~~~l~ii--G~g~~~~~ 235 (363) T cd04955 162 YGRDSTYIPYGADHVVSSEEDEILKKYGLEPGRYYLLV-GRIVPENNID-DLIEAFSKSNS--GKKLVIV--GNADHNTP 235 (363) T ss_pred CCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEEE-ECCCCCCCHH-HHHHHHHHHCC--CCEEEEE--CCCCCCCH T ss_conf 49983997898754677750667987089989889999-4475304799-99999985263--5619997--77776308 Q ss_pred ----HHHHHHHCCCCCCCCCCC--CCCHHHHHCCCEEEE---CCC--CHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH Q ss_conf ----653221001111345444--451444300448997---254--202333455296048753355248989998999 Q gi|254781097|r 233 ----VQKQYDELGCKATLACFF--KDIERYIVEANLLIC---RSG--ALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYY 301 (369) Q Consensus 233 ----~~~~~~~~~~~~~v~~f~--~~m~~~~~~aDlvIs---raG--~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~ 301 (369) T Consensus 236 ~~~~l~~~~~-~~~~V~flG~~~~~~~~~~~~~ad~~v~pS~~~Eg~~~~~lEAma~G~PVVas~~----~~----~~ev 306 (363) T cd04955 236 YGKLLKEKAA-ADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDN----PF----NREV 306 (363) T ss_pred HHHHHHHHHC-CCCCEEEECCCCCHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHCCCEEECCC----CC----CCEE T ss_conf 9999999734-6993797078884778986313544643456667876899999981999999179----98----7069 Q ss_pred HHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHH Q ss_conf 998898899800019989999999998618999999999998527-832799999999999 Q gi|254781097|r 302 LQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKG-KPQAVLMLSDLVEKL 361 (369) Q Consensus 302 l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~-~~~aa~~i~~~i~~l 361 (369) T Consensus 307 ~~~~--~~~~~----~~~~la~~i~~ll~d~~~~~~~g~~ar~~v~~~fsw~~~a~~~~~l 361 (363) T cd04955 307 LGDK--AIYFK----VGDDLASLLEELEADPEEVSAMAKAARERIREKYTWEKIADQYEEL 361 (363) T ss_pred ECCC--EEECC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH T ss_conf 7588--47779----9899999999997599999999999999999858999999999997 |
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.9e-12 Score=101.86 Aligned_cols=339 Identities=16% Similarity=0.191 Sum_probs=202.5 Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCC-CEEE-EEECHHH-----HHHHCCCCCC-CEEEEECCCCCCCCHHHHH Q ss_conf 99887699987885256207999999999659-8399-9957237-----6762444687-5168752565653312332 Q gi|254781097|r 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRG-YAVY-LITDRRA-----RSFITDFPAD-SIYEIVSSQVRFSNPFVFW 72 (369) Q Consensus 1 M~~~~~ili~~gGTGGHi~palala~~L~~~g-~~v~-~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 72 (369) T Consensus 1 m~~~-Kv~~I~-GTRPE~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~~i~~pdy~L~i~~~-~~tl~~~t 77 (383) T COG0381 1 MKML-KVLTIF-GTRPEAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELFGIRKPDYDLNIMKP-GQTLGEIT 77 (383) T ss_pred CCCE-EEEEEE-ECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHCCCC-CCCHHHHH T ss_conf 9963-899998-55899998709999998589973599970665427789999998289888831321666-88889999 Q ss_pred HHHHHCCCCCHHHHHHHHHCCCCEEEECCC-CCCHHHHHHHHHCCCCCEEECC-----CCC-CHHHHHH-HHHHHHHHHC Q ss_conf 111000121101355542034442431265-3210247888623411012215-----320-0156778-8999998741 Q gi|254781097|r 73 NSLVILWKAFIASLRLIKKLKPNVVVGFGG-YHSISPLLAGMILRIPSMVHEQ-----NVI-MGKANRL-LSWGVQIIAR 144 (369) Q Consensus 73 ~~l~~~~~~~~~~~~ii~~~kPDvVi~tGG-y~s~P~~iaA~~l~iP~vihEq-----N~v-~G~~nk~-l~~~a~~v~~ 144 (369) T Consensus 78 ------~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt~~~~~PEE~NR~l~~~~S~~hfa 151 (383) T COG0381 78 ------GNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRTGDLYFPEEINRRLTSHLSDLHFA 151 (383) T ss_pred ------HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC T ss_conf ------99999999999862999899917853688999999986893688742544478778379878788776523037 Q ss_pred CCCCCCC-----CCCCCCCEEEECCCCHHHHHHHHHH----HHH---HCCCCCCEEEEEEC---CCCCCCHHHHHHHHHH Q ss_conf 3432222-----3556673253044432456543334----433---11447814898630---4322210233344544 Q gi|254781097|r 145 GLVSSQK-----KVLLRKIIVTGNPIRSSLIKMKDIP----YQS---SDLDQPFHLLVFGG---SQGAKVFSDIVPKSIA 209 (369) Q Consensus 145 ~~~~~~~-----~~~~~k~~~~G~PvR~~~~~~~~~~----~~~---~~~~~~~~ILv~GG---S~Ga~~ln~~v~~~~~ 209 (369) T Consensus 152 pte~ar~nLl~EG~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~~~~~~~~~iLvT~HRreN~~-~~~~-~i~~al~ 229 (383) T COG0381 152 PTEIARKNLLREGVPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKGLDDKDKKYILVTAHRRENVG-EPLE-EICEALR 229 (383) T ss_pred CHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCHHHCCC-CCHH-HHHHHHH T ss_conf 7199999999769995516885973999999877641000466776632456738999705554036-4299-9999999 Q ss_pred HHHHHCCCCCEEEEEECCC-CHHHHH-HHHHHCCCCCCCCCC--CCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEE Q ss_conf 3232024660677620255-167765-322100111134544--445144430044899725420233345529604875 Q gi|254781097|r 210 LIPEMQRKRLVIMQQVRED-DKEKVQ-KQYDELGCKATLACF--FKDIERYIVEANLLICRSGALTVSEIAVIGRPAILV 285 (369) Q Consensus 210 ~l~~~~~~~~~v~~~~g~~-~~~~~~-~~~~~~~~~~~v~~f--~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlI 285 (369) T Consensus 230 ~i~~~~-~~~~viyp~H~~~~v~e~~~~~L~-~~~~v~li~pl~~~~f~~L~~~a~~iltDSGgiq-EEAp~lg~Pvl~l 306 (383) T COG0381 230 EIAEEY-PDVIVIYPVHPRPRVRELVLKRLK-NVERVKLIDPLGYLDFHNLMKNAFLILTDSGGIQ-EEAPSLGKPVLVL 306 (383) T ss_pred HHHHHC-CCCEEEEECCCCHHHHHHHHHHHC-CCCCEEEECCCCHHHHHHHHHHCEEEEECCCCHH-HHHHHCCCCEEEE T ss_conf 999867-895699747997666688999838-9876798688366989999974509995487135-4477619927761 Q ss_pred ECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH Q ss_conf 3355248989998999998898899800019989999999998618999999999998527832799999999999985 Q gi|254781097|r 286 PYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLAHV 364 (369) Q Consensus 286 P~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~la~~ 364 (369) T Consensus 307 R--~~TER--P---E-~v~agt~~lvg~---~~~~i~~~~~~ll~~~~~~~~m~~~~npYgdg~as~rIv~~l~~~~~~ 374 (383) T COG0381 307 R--DTTER--P---E-GVEAGTNILVGT---DEENILDAATELLEDEEFYERMSNAKNPYGDGNASERIVEILLNYFDS 374 (383) T ss_pred C--CCCCC--C---C-CEECCCEEEECC---CHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 3--67778--4---1-000370487176---589999999998629588998742558886750579999999988520 |
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.2e-11 Score=99.10 Aligned_cols=312 Identities=14% Similarity=0.078 Sum_probs=160.5 Q ss_pred HHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEE Q ss_conf 79999999996598399995723767624446875168752565653312332111000121101355542034442431 Q gi|254781097|r 20 PAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLRLIKKLKPNVVVG 99 (369) Q Consensus 20 palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~~~kPDvVi~ 99 (369) T Consensus 20 y~~~L~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~---~~~~~~~~~~~~~~~~~~dv~h~ 91 (365) T cd03809 20 YARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLP--RRL---LWG---LLFLLRAGDRLLLLLLGLDLLHS 91 (365) T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC--CCC---HHH---HHHHHHHHHHHHHHHCCCCEEEE T ss_conf 9999999997459977999935864221111123541013566--531---133---43577888899998559999998 Q ss_pred CCCCCCHHHHHHHHHCCCCCE--EEC------CCCCCHHHHH-------HHHHHHHHHHCCCCCCC----C--CCCCCCC Q ss_conf 265321024788862341101--221------5320015677-------88999998741343222----2--3556673 Q gi|254781097|r 100 FGGYHSISPLLAGMILRIPSM--VHE------QNVIMGKANR-------LLSWGVQIIARGLVSSQ----K--KVLLRKI 158 (369) Q Consensus 100 tGGy~s~P~~iaA~~l~iP~v--ihE------qN~v~G~~nk-------~l~~~a~~v~~~~~~~~----~--~~~~~k~ 158 (369) T Consensus 92 ~~~--~~~---~~~~~~~~~V~t~HD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~vS~~~~~~~~~~~~~~~~~i 166 (365) T cd03809 92 PHN--TAP---LLRLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVPPDKI 166 (365) T ss_pred CCC--HHH---HHHHCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCHHHE T ss_conf 983--265---564359989999788506538200797789999999999999699999979999999999849885898 Q ss_pred EEEECCCCHHHHHHHHHH--HHHHCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEEEC-CCCHHHHH Q ss_conf 253044432456543334--433114478148986304322-21023334454432320246606776202-55167765 Q gi|254781097|r 159 IVTGNPIRSSLIKMKDIP--YQSSDLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLVIMQQVR-EDDKEKVQ 234 (369) Q Consensus 159 ~~~G~PvR~~~~~~~~~~--~~~~~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v~~~~g-~~~~~~~~ 234 (369) T Consensus 167 ~vi~~gv~~~~~~~~~~~~~~~~~~~~~~~~il~vg-~~~~~K~~~-~li~a~~~l~~~~~-~~~lvivG~~~~~~~~~~ 243 (365) T cd03809 167 VVIPLGVDPRFRPPPAEAEVLRALYLLPRPYFLYVG-TIEPRKNLE-RLLEAFARLPAKGP-DPKLVIVGKRGWLNEELL 243 (365) T ss_pred EEECCCCCHHCCCCCCHHHHHHHHCCCCCCEEEEEE-CCCCCCCHH-HHHHHHHHHHHHCC-CCEEEEECCCCCCHHHHH T ss_conf 998155551105887426788874389998899995-364557999-99999999887689-938999778974179999 Q ss_pred HHHHH--CCCCCCCCCCCC--CCHHHHHCCCEEEECC----CCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC Q ss_conf 32210--011113454444--5144430044899725----420233345529604875335524898999899999889 Q gi|254781097|r 235 KQYDE--LGCKATLACFFK--DIERYIVEANLLICRS----GALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGG 306 (369) Q Consensus 235 ~~~~~--~~~~~~v~~f~~--~m~~~~~~aDlvIsra----G~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G 306 (369) T Consensus 244 ~~~~~~~~~~~v~~~g~~~~~~l~~~y~~ad~~v~PS~~EgfGl~~lEAma~G~Pvi~s~~~~----~~----Ei~--g~ 313 (365) T cd03809 244 ARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LP----EVA--GD 313 (365) T ss_pred HHHHHCCCCCCEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCCCEEEECCCC----CC----EEE--CC T ss_conf 999965999858993687989999999717743541433578968999998599899907998----73----085--78 Q ss_pred CEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH Q ss_conf 88998000199899999999986189999999999985278327999999999 Q gi|254781097|r 307 GAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVE 359 (369) Q Consensus 307 ~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~ 359 (369) T Consensus 314 ~g~~~~p~--d~~~la~~i~~ll~d~~~~~~~~~~~~~~~~~fsW~~~a~~~l 364 (365) T cd03809 314 AALYFDPL--DPEALAAAIERLLEDPALREELRERGLARAKRFSWEKTARRTL 364 (365) T ss_pred CEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH T ss_conf 37998999--9999999999998799999999999999999699999999985 |
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.45 E-value=3e-12 Score=105.16 Aligned_cols=332 Identities=15% Similarity=0.200 Sum_probs=171.8 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHC-CCEEEEE-ECHHHHH-----HHCC-CCCCCEEEEECCCCCCCCHHHHHHHHHH Q ss_conf 69998788525620799999999965-9839999-5723767-----6244-4687516875256565331233211100 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNR-GYAVYLI-TDRRARS-----FITD-FPADSIYEIVSSQVRFSNPFVFWNSLVI 77 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~-g~~v~~~-~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 77 (369) T Consensus 1 KI~~vtGtR-ae~~kl~pl~~~l~~~~~~~~~li~TGqH~~~~~g~t~~~i~~~~~~~~~~~~~---~~~~~~~~~~--- 73 (363) T cd03786 1 KILVVTGTR-PEYIKLAPLIRALKKDPGFELVLVVTGQHYDMEMGVTFFEILFIIKPDYDLLLG---SDSQSLGAQT--- 73 (363) T ss_pred CEEEEEECH-HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHCCCHHHHHHCCCCCCEEEECC---CCCCCHHHHH--- T ss_conf 989999313-719999999999974899988999938976701088899982688887785459---9997699999--- Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCC-CCCHHHHHHHHHCCCCCEEECCCCCC---HH---HHH-HHHHHHHHHHCCCCCC Q ss_conf 0121101355542034442431265-32102478886234110122153200---15---677-8899999874134322 Q gi|254781097|r 78 LWKAFIASLRLIKKLKPNVVVGFGG-YHSISPLLAGMILRIPSMVHEQNVIM---GK---ANR-LLSWGVQIIARGLVSS 149 (369) Q Consensus 78 ~~~~~~~~~~ii~~~kPDvVi~tGG-y~s~P~~iaA~~l~iP~vihEqN~v~---G~---~nk-~l~~~a~~v~~~~~~~ 149 (369) T Consensus 74 -~~~~~~~~~~l~~~kPD~VlV~GDr~e~la~Alaa~~~~Ipi~HiegG~rs~~~~~~de~~R~~i~kls~lhf~~t~~~ 152 (363) T cd03786 74 -AGLLIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFDRGMPDEENRHAIDKLSDLHFAPTEEA 152 (363) T ss_pred -HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEECCCHHH T ss_conf -9999999999997299999994888428799999998198189962643347679987798755221012561461999 Q ss_pred CC-----CCCCCCCEEEECCCCHHHHHHHHHHH-----HHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC Q ss_conf 22-----35566732530444324565433344-----331144781489863043222102333445443232024660 Q gi|254781097|r 150 QK-----KVLLRKIIVTGNPIRSSLIKMKDIPY-----QSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRL 219 (369) Q Consensus 150 ~~-----~~~~~k~~~~G~PvR~~~~~~~~~~~-----~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~ 219 (369) T Consensus 153 ~~~L~~~G~~~~~I~~vG~~~iD~l~~~~~~~~~~~~~~~~~~~~~~~~lvt~Hr~~n~~~~~~~~~i~~al~~~~~~~~ 232 (363) T cd03786 153 RRNLLQEGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAELAEEDV 232 (363) T ss_pred HHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC T ss_conf 99998615475525773861999999887641032667744545587799996452333568999999999999874396 Q ss_pred EEEEEECCCCHHHHHH---HHHHCCCCCCCCCC--CCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCH Q ss_conf 6776202551677653---22100111134544--445144430044899725420233345529604875335524898 Q gi|254781097|r 220 VIMQQVREDDKEKVQK---QYDELGCKATLACF--FKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQD 294 (369) Q Consensus 220 ~v~~~~g~~~~~~~~~---~~~~~~~~~~v~~f--~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~h 294 (369) T Consensus 233 ~v~~pn~d~~~~~i~~~~~~~~~~~~~i~~~~~l~~~~~~~ll~~a~~vigdSs-Gi~Eea~~l~~P~i~ir------~r 305 (363) T cd03786 233 PVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG-GIQEEASFLGVPVLNLR------DR 305 (363) T ss_pred EEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCEEEEECCC-CCEEEECCCCCCEEEEC------CC T ss_conf 899977972577899999998557877999788774999999950739982588-86885020698789826------87 Q ss_pred HHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH Q ss_conf 99989999988988998000199899999999986189999999999985278327999999999 Q gi|254781097|r 295 QLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVE 359 (369) Q Consensus 295 Q~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~ 359 (369) T Consensus 306 qe~r--e~~~~~~~~~v~~---~~~~I~~~i~~~l~~~~~~~~~~--~npyGdG~as~rI~~iL~ 363 (363) T cd03786 306 TERP--ETVESGTNVLVGT---DPEAILAAIEKLLSDEFAYSLMS--INPYGDGNASERIVEILK 363 (363) T ss_pred CCCC--EEHHCCEEEECCC---CHHHHHHHHHHHHCCHHHHHCCC--CCCCCCCHHHHHHHHHHC T ss_conf 7673--4210054886589---99999999999975703453558--998979879999999869 |
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.42 E-value=2e-10 Score=92.35 Aligned_cols=325 Identities=13% Similarity=0.105 Sum_probs=160.9 Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECHH---H---HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHH--------HCCC Q ss_conf 2562079999999996598399995723---7---676244468751687525656533123321110--------0012 Q gi|254781097|r 15 GGHVFPAVALSHELKNRGYAVYLITDRR---A---RSFITDFPADSIYEIVSSQVRFSNPFVFWNSLV--------ILWK 80 (369) Q Consensus 15 GGHi~palala~~L~~~g~~v~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~~~~ 80 (369) T Consensus 14 ~G~~ir~~~llk~L~~~-h~V~l~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~-~~-~~~~~l~~l~~~~p~~~~~~~s 89 (397) T TIGR03087 14 KGDKIRSFHLLRHLAAR-HRVHLGTFVDDPEDWQYAAALRPLC-EEVCVVPLDP-RV-ARLRSLLGLLTGEPLSLPYYRS 89 (397) T ss_pred CCHHHHHHHHHHHHHHC-CCEEEEEECCCCCCHHHHHHHHHHC-CEEEEEECCC-HH-HHHHHHHHHCCCCCCCCHHHCC T ss_conf 42889999999999828-9389998269866767889998644-4379996784-17-7779998752489872155349 Q ss_pred -CCHH-HHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEE--ECCCCC--------CHHHHHHH--------HHHHH Q ss_conf -1101-3555420344424312653210247888623411012--215320--------01567788--------99999 Q gi|254781097|r 81 -AFIA-SLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMV--HEQNVI--------MGKANRLL--------SWGVQ 140 (369) Q Consensus 81 -~~~~-~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vi--hEqN~v--------~G~~nk~l--------~~~a~ 140 (369) T Consensus 90 ~~~~~~i~~~~~~~~~D~i~~~~~~--~a~yl~~~~~~~p~ild~hdv~s~~~~~~a~~~~~~~~~~~~~e~~~l~~~E~ 167 (397) T TIGR03087 90 RRLARWVNALLAAEPVDAIVVFSSA--MAQYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYER 167 (397) T ss_pred HHHHHHHHHHHHCCCCCEEEEECHH--HHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH T ss_conf 9999999999606998689991657--67753445237998999853434899999873454677899999999999999 Q ss_pred HHHCCCC--------CC--CCC-CC--CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC----HHHH Q ss_conf 8741343--------22--223-55--667325304443245654333443311447814898630432221----0233 Q gi|254781097|r 141 IIARGLV--------SS--QKK-VL--LRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGAKV----FSDI 203 (369) Q Consensus 141 ~v~~~~~--------~~--~~~-~~--~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~----ln~~ 203 (369) T Consensus 168 ~~~~~~d~~~~vS~~d~~~~~~~~~~~~~~i~vipnGvd~~~f~p~~~-~~~~~~~~~~-~i~f~G~~~~~pN~da~~~f 245 (397) T TIGR03087 168 AIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRD-YPNPYPPGKR-VLVFTGAMDYWPNIDAVVWF 245 (397) T ss_pred HHHHHCCEEEEECHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCC-CCCCCCCCCC-EEEEEEECCCCCCHHHHHHH T ss_conf 999966999997799999998747776772776578755123687644-4576678898-79999717872309999999 Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEE--CCCCHH---HHHHHHH Q ss_conf 34454432320246606776202551677653221001111345444451444300448997--254202---3334552 Q gi|254781097|r 204 VPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCKATLACFFKDIERYIVEANLLIC--RSGALT---VSEIAVI 278 (369) Q Consensus 204 v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlvIs--raG~~T---i~E~~~~ 278 (369) T Consensus 246 ~~~v~p~l~~~-~p~~~~~i-vG~~p~~~~~~l-~~-~~~V~~~G~V~d~~~~~~~a~v~v~Pl~~g~G~~~KilEama~ 321 (397) T TIGR03087 246 AERVFPAVRAR-RPAAEFYI-VGAKPSPAVRAL-AA-LPGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAM 321 (397) T ss_pred HHHHHHHHHHH-CCCCEEEE-EECCCCHHHHHH-CC-CCCEEEEEECCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHC T ss_conf 99999999987-89987999-908962999985-17-9997997654986999961989999465445753579999976 Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC-HHHHHHHHH Q ss_conf 9604875335524898999899999889889980001998999999999861899999999999852783-279999999 Q gi|254781097|r 279 GRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKP-QAVLMLSDL 357 (369) Q Consensus 279 g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~-~aa~~i~~~ 357 (369) T Consensus 322 g~PvVst~--~g~eg------l~-~~~g~~~lia~---~~~~fa~~i~~Ll~d~~~~~~l~~~~r~~v~~~ysW~~~~~~ 389 (397) T TIGR03087 322 AKPVVASP--EAAEG------ID-ALPGAELLVAA---DPADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLAR 389 (397) T ss_pred CCCEEECC--CCCCC------CC-CCCCCEEEECC---CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH T ss_conf 99899777--43024------43-67897059579---999999999999819999999999999999982999999999 Q ss_pred HHHHHH Q ss_conf 999998 Q gi|254781097|r 358 VEKLAH 363 (369) Q Consensus 358 i~~la~ 363 (369) T Consensus 390 le~~~~ 395 (397) T TIGR03087 390 LDALLE 395 (397) T ss_pred HHHHHC T ss_conf 999864 |
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.8e-10 Score=91.38 Aligned_cols=311 Identities=16% Similarity=0.058 Sum_probs=151.0 Q ss_pred EEEEECCC--------CHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHH Q ss_conf 69998788--------5256207999999999659839999572376762444687516875256565331233211100 Q gi|254781097|r 6 VILLVAGG--------TGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVI 77 (369) Q Consensus 6 ~ili~~gG--------TGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 77 (369) T Consensus 2 kI~~v~~~~~p~pP~~~GG~e~~~~~La~~L~~~Gh~V~v~~~~~~~~~~---~~~~~~---~~~~~~~~----~~~~~~ 71 (335) T cd03802 2 RIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAA---PLVPVV---PEPLRLDA----PGRDRA 71 (335) T ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC---CCCCCC---CCCCCCCC----CCCCHH T ss_conf 86998884003699998979999999999999769989999628987788---500456---76654454----422124 Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHH-HHH--HHHCCCCCCCCCCC Q ss_conf 012110135554203444243126532102478886234110122153200156778899-999--87413432222355 Q gi|254781097|r 78 LWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVIMGKANRLLSW-GVQ--IIARGLVSSQKKVL 154 (369) Q Consensus 78 ~~~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~v~G~~nk~l~~-~a~--~v~~~~~~~~~~~~ 154 (369) T Consensus 72 ~~~~~~~~~~~~~~~~~Dvvh~~~~---~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~i~vS~~~~~~~~~ 148 (335) T cd03802 72 EAEALALAERALAAGDFDIVHNHSL---HLPLPFARPLPVPVVTTLHGPPDPELLKLYYAARPDVPFVSISDAQRRPWPP 148 (335) T ss_pred HHHHHHHHHHHHHHCCCCEEEECCC---HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHCCC T ss_conf 5689999999997579858998971---7899998627997899989997067799997523586899945999954577 Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH Q ss_conf 66732530444324565433344331144781489863043222102333445443232024660677620255167765 Q gi|254781097|r 155 LRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQ 234 (369) Q Consensus 155 ~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~ 234 (369) T Consensus 149 ~~~~~vI~ngvd~~~f~~--------~~~~~~~~l~vGRl~~~KG~~~----li~a~~~-~~~~L~i~--G~~~~~~~~~ 213 (335) T cd03802 149 LPWVATVHNGIDLDDYPF--------RGPKGDYLLFLGRISPEKGPHL----AIRAARR-AGIPLKLA--GPVSDPDYFY 213 (335) T ss_pred CCCEEEECCCCCHHHCCC--------CCCCCCEEEEEEECCCCCCHHH----HHHHHHH-CCCEEEEE--ECCCCHHHHH T ss_conf 677799879988876798--------8899978999993363347699----9999874-59808999--4767379999 Q ss_pred HHH---HHCCCCCCCCCCCC--CCHHHHHCCCEEE--EC-C-C-CHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH Q ss_conf 322---10011113454444--5144430044899--72-5-4-202333455296048753355248989998999998 Q gi|254781097|r 235 KQY---DELGCKATLACFFK--DIERYIVEANLLI--CR-S-G-ALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQE 304 (369) Q Consensus 235 ~~~---~~~~~~~~v~~f~~--~m~~~~~~aDlvI--sr-a-G-~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~ 304 (369) T Consensus 214 ~~~~~~~~~~~~V~f~G~v~~~~~~~~~~~a~~~v~pS~~~E~fglv~lEAma~G~PVVat~~----gG----~~E~v~~ 285 (335) T cd03802 214 REIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRR----GA----VPEVVED 285 (335) T ss_pred HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCC----CC----HHHHHCC T ss_conf 999996178995899504683999999997412456765324674799999984998999289----98----1454238 Q ss_pred CCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH Q ss_conf 898899800019989999999998618999999999998527832799999999999 Q gi|254781097|r 305 GGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKL 361 (369) Q Consensus 305 ~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~l 361 (369) T Consensus 286 g~~G~lv~----~~~~la~ai~~~~~~~--~~~~r~~~~~~---fs~~~~~~~~~~~ 333 (335) T cd03802 286 GVTGFLVD----SVEELAAAVARADRLD--RAACRRRAERR---FSAARMVDDYLAL 333 (335) T ss_pred CCEEEECC----CHHHHHHHHHHHHHCC--HHHHHHHHHHH---CCHHHHHHHHHHH T ss_conf 96189819----9999999999875289--99999999986---8999999999997 |
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.4e-08 Score=75.38 Aligned_cols=320 Identities=15% Similarity=0.164 Sum_probs=175.3 Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEE--EEEE-CHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC Q ss_conf 7699987885256207999999999659839--9995-723767624446875168752565653312332111000121 Q gi|254781097|r 5 NVILLVAGGTGGHVFPAVALSHELKNRGYAV--YLIT-DRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKA 81 (369) Q Consensus 5 ~~ili~~gGTGGHi~palala~~L~~~g~~v--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (369) T Consensus 50 p~vWiHaaSV-GEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~-YlP~------D----------~ 111 (419) T COG1519 50 PLVWIHAASV-GEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQ-YLPL------D----------L 111 (419) T ss_pred CEEEEEECCH-HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCEEEE-ECCC------C----------C T ss_conf 8079996446-6788889999999976899878999527637999998769870899-6576------7----------6 Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCHHHH-HHHHHCCCCCEEECCCCCCH-HH-HH--HHHHHHHHHHCCCCCC------- Q ss_conf 1013555420344424312653210247-88862341101221532001-56-77--8899999874134322------- Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGYHSISPL-LAGMILRIPSMVHEQNVIMG-KA-NR--LLSWGVQIIARGLVSS------- 149 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy~s~P~~-iaA~~l~iP~vihEqN~v~G-~~-nk--~l~~~a~~v~~~~~~~------- 149 (369) T Consensus 112 ~~~v~rFl~~~~P~l~Ii~EtE-lWPnli~e~~~~~~p~~Lv--NaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D 188 (419) T COG1519 112 PIAVRRFLRKWRPKLLIIMETE-LWPNLINELKRRGIPLVLV--NARLSDRSFARYAKLKFLARLLFKNIDLILAQSEED 188 (419) T ss_pred HHHHHHHHHHCCCCEEEEEECC-CCHHHHHHHHHCCCCEEEE--EEEECHHHHHHHHHHHHHHHHHHHHCCEEEECCHHH T ss_conf 6889999974289879998001-3678999998769989999--423023257779877899999997423334548888 Q ss_pred CC---CCCCCCCEEEECCC---CHHHHHHHHHHHHHHCCCCCCEEEEEECCC-CCCCHHHHHHHHHHHHHHHCCCCCEEE Q ss_conf 22---35566732530444---324565433344331144781489863043-222102333445443232024660677 Q gi|254781097|r 150 QK---KVLLRKIIVTGNPI---RSSLIKMKDIPYQSSDLDQPFHLLVFGGSQ-GAKVFSDIVPKSIALIPEMQRKRLVIM 222 (369) Q Consensus 150 ~~---~~~~~k~~~~G~Pv---R~~~~~~~~~~~~~~~~~~~~~ILv~GGS~-Ga~~ln~~v~~~~~~l~~~~~~~~~v~ 222 (369) T Consensus 189 ~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaSTH~GE---eei~l~~~~~l~~~~-~~~llI 264 (419) T COG1519 189 AQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAASTHEGE---EEIILDAHQALKKQF-PNLLLI 264 (419) T ss_pred HHHHHHCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCH---HHHHHHHHHHHHHHC-CCCEEE T ss_conf 9999964986138633324237787324899999998508888559995477863---889999999999638-995699 Q ss_pred EEECCCCHHHHHH---HHHHCCCCCC---------------CCCCCCCCHHHHHCCCEEEE------CCCCHHHHHHHHH Q ss_conf 6202551677653---2210011113---------------45444451444300448997------2542023334552 Q gi|254781097|r 223 QQVREDDKEKVQK---QYDELGCKAT---------------LACFFKDIERYIVEANLLIC------RSGALTVSEIAVI 278 (369) Q Consensus 223 ~~~g~~~~~~~~~---~~~~~~~~~~---------------v~~f~~~m~~~~~~aDlvIs------raG~~Ti~E~~~~ 278 (369) T Consensus 265 lV--PRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN~L-Epa~~ 341 (419) T COG1519 265 LV--PRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHNPL-EPAAF 341 (419) T ss_pred EE--CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECHHHHHHHHHHCCEEEECCCCCCCCCCCHH-HHHHC T ss_conf 91--5875567999999997598188613789998888689996286899997343279987744677898822-37870 Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC--HHHHHHHH Q ss_conf 9604875335524898999899999889889980001998999999999861899999999999852783--27999999 Q gi|254781097|r 279 GRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKP--QAVLMLSD 356 (369) Q Consensus 279 g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~--~aa~~i~~ 356 (369) T Consensus 342 ~~pvi~Gp~~~---N-f~ei~~~l~~~ga~~~v~~----~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~~~gal~r~l~ 413 (419) T COG1519 342 GTPVIFGPYTF---N-FSDIAERLLQAGAGLQVED----ADLLAKAVELLLADEDKREAYGRAGLEFLAQNRGALARTLE 413 (419) T ss_pred CCCEEECCCCC---C-HHHHHHHHHHCCCEEEECC----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 89788777513---5-8999999986698699778----89999999997078899999999899999986779999999 Q ss_pred HHHH Q ss_conf 9999 Q gi|254781097|r 357 LVEK 360 (369) Q Consensus 357 ~i~~ 360 (369) T Consensus 414 ~l~~ 417 (419) T COG1519 414 ALKP 417 (419) T ss_pred HHHH T ss_conf 7551 |
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.1e-08 Score=80.30 Aligned_cols=323 Identities=19% Similarity=0.167 Sum_probs=168.2 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH-HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHH Q ss_conf 69998788525620799999999965983999957237-67624446875168752565653312332111000121101 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRA-RSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIA 84 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (369) T Consensus 2 kVwiDI~n~-~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~ygf~~~~Igk~--g~~tl~~Kl~--~~-~eR~~~ 75 (346) T COG1817 2 KVWIDIGNP-PHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLYGFPYKSIGKH--GGVTLKEKLL--ES-AERVYK 75 (346) T ss_pred EEEEECCCC-CHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHCCCEEEECCC--CCCCHHHHHH--HH-HHHHHH T ss_conf 379975896-10238999999998578499999851275889999839970764045--7744789999--99-999999 Q ss_pred HHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCC--CCCCC-CCCCCCCCEEE Q ss_conf 3555420344424312653210247888623411012215320015677889999987413--43222-23556673253 Q gi|254781097|r 85 SLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVIMGKANRLLSWGVQIIARG--LVSSQ-KKVLLRKIIVT 161 (369) Q Consensus 85 ~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~v~G~~nk~l~~~a~~v~~~--~~~~~-~~~~~~k~~~~ 161 (369) T Consensus 76 L~ki~~~~kpdv~i~~---~s~~l~rvafgLg~psIi~~D~ehA~~qnkl~~Pla~~ii~P~~~~~~~~~~~G~~p~~i~ 152 (346) T COG1817 76 LSKIIAEFKPDVAIGK---HSPELPRVAFGLGIPSIIFVDNEHAEAQNKLTLPLADVIITPEAIDEEELLDFGADPNKIS 152 (346) T ss_pred HHHHHHHCCCCEEEEC---CCCCHHHHHHHCCCCEEEECCCHHHHHHHHCCHHHHHHEECCCCCCHHHHHHHCCCCCCEE T ss_conf 9998752298557522---7810556776528863896487547778630002442150643443577887088955211 Q ss_pred EC-------CCCHHHHHHHHHHHHHHCCCCC-CEEEEEECCCCCCCHHH-----HHHHHHHHHHHHCCCCCEEEEEECCC Q ss_conf 04-------4432456543334433114478-14898630432221023-----33445443232024660677620255 Q gi|254781097|r 162 GN-------PIRSSLIKMKDIPYQSSDLDQP-FHLLVFGGSQGAKVFSD-----IVPKSIALIPEMQRKRLVIMQQVRED 228 (369) Q Consensus 162 G~-------PvR~~~~~~~~~~~~~~~~~~~-~~ILv~GGS~Ga~~ln~-----~v~~~~~~l~~~~~~~~~v~~~~g~~ 228 (369) T Consensus 153 ~~~giae~~~v~~--f~pd~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g---iV~i--pr~~ 225 (346) T COG1817 153 GYNGIAELANVYG--FVPDPEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG---IVLI--PREK 225 (346) T ss_pred CCCCEEEEEECCC--CCCCHHHHHHCCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHCC---EEEE--CCCH T ss_conf 3566267731026--7988789987588879866999643445423433222566888999887572---8995--5755 Q ss_pred CHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCE Q ss_conf 16776532210011113454444514443004489972542023334552960487533552489899989999988988 Q gi|254781097|r 229 DKEKVQKQYDELGCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGA 308 (369) Q Consensus 229 ~~~~~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a 308 (369) T Consensus 226 ~~~eife~~~----n~i~pk~~vD~l~Llyya~lvig-~ggTMarEaAlLGtpaIs~-~pGk----ll~vdk~lie~G~~ 295 (346) T COG1817 226 EQAEIFEGYR----NIIIPKKAVDTLSLLYYATLVIG-AGGTMAREAALLGTPAISC-YPGK----LLAVDKYLIEKGLL 295 (346) T ss_pred HHHHHHHHHC----CCCCCCCCCCHHHHHHHHHEEEC-CCCHHHHHHHHHCCCEEEE-CCCC----CCCCCHHHHHCCCE T ss_conf 6899874101----10588555227878865415641-7703788888728834785-3885----33223898866843 Q ss_pred EEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH Q ss_conf 9980001998999999999861899999999999852783279999999999998 Q gi|254781097|r 309 KVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLAH 363 (369) Q Consensus 309 ~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~la~ 363 (369) T Consensus 296 ~~s~----~~~~~~~~a~~~l~~~~~-kK--~~~~k~--e~~~~~ii~~ve~~~e 341 (346) T COG1817 296 YHST----DEIAIVEYAVRNLKYRRL-KK--TGVLKL--EDPTRLIIDVVEEMLE 341 (346) T ss_pred EECC----CHHHHHHHHHHHHHCHHH-CC--CCCCCC--CCHHHHHHHHHHHHHH T ss_conf 4317----888999999998425000-23--344220--0379999999999864 |
|
| >PRK10125 predicted glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.1e-06 Score=66.31 Aligned_cols=329 Identities=12% Similarity=0.098 Sum_probs=149.1 Q ss_pred EEEEECC-CCHHHHHHHHHHHHHHHHCCCEEEEEECHHH--HHHHCCCCCCCEEEEECCCCCCCCHH--HHHHHHHH-CC Q ss_conf 6999878-8525620799999999965983999957237--67624446875168752565653312--33211100-01 Q gi|254781097|r 6 VILLVAG-GTGGHVFPAVALSHELKNRGYAVYLITDRRA--RSFITDFPADSIYEIVSSQVRFSNPF--VFWNSLVI-LW 79 (369) Q Consensus 6 ~ili~~g-GTGGHi~palala~~L~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~-~~ 79 (369) T Consensus 3 VL~INts~~~GGAaraA~rLh~~L~~~G~~s~mlv~~~~~~~~~v~~~~~~--~~~~~~~-~~~~~~~~~~~r~~~~~~~ 79 (405) T PRK10125 3 ILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYP--QVIKHTP-RMTAMANIALFRLFNRDLF 79 (405) T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC--CEEECCC-HHHHHHHHHHHHCCCCCCC T ss_conf 999973669882999999999999857996699997357898511357766--2021240-4677765778761363224 Q ss_pred CCCHHH-HHHHHHCCCCEEEE---CCCCCCHHHHHHH------HHCCCCCE--EECCCCC-------------------- Q ss_conf 211013-55542034442431---2653210247888------62341101--2215320-------------------- Q gi|254781097|r 80 KAFIAS-LRLIKKLKPNVVVG---FGGYHSISPLLAG------MILRIPSM--VHEQNVI-------------------- 127 (369) Q Consensus 80 ~~~~~~-~~ii~~~kPDvVi~---tGGy~s~P~~iaA------~~l~iP~v--ihEqN~v-------------------- 127 (369) T Consensus 80 ~~~~~~~~~i~~~~~pDIihLH~ih~~~ln~~~l~~~~~~~ki~k~~kPvVWTLHDmW~fTG~Chy~~~C~~wk~gC~~C 159 (405) T PRK10125 80 GNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKC 159 (405) T ss_pred CCCHHHHHHHHCCCCCCEEEEEECCCCEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCCCC T ss_conf 56267888762157898899740254543099998786554430479978999436765567778878437676255656 Q ss_pred ------CH----HHHHHHHHHHHHH---------HCC---CCC-C-CCCCCCCCCEEEECCCCHHHHHHH-HHHHHHHCC Q ss_conf ------01----5677889999987---------413---432-2-223556673253044432456543-334433114 Q gi|254781097|r 128 ------MG----KANRLLSWGVQII---------ARG---LVS-S-QKKVLLRKIIVTGNPIRSSLIKMK-DIPYQSSDL 182 (369) Q Consensus 128 ------~G----~~nk~l~~~a~~v---------~~~---~~~-~-~~~~~~~k~~~~G~PvR~~~~~~~-~~~~~~~~~ 182 (369) T Consensus 160 P~L~~yp~~~~D~s~~~~~~K~~~~~~~~~~~~~~V~ps~~~~~~~~sl~~~~~v~vIpNgID~~~~~~~~~~~~~~~-~ 238 (405) T PRK10125 160 PTLNNYPPVRVDRAHQLVAGKRQLFREMLRLGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILAELPPVRE-T 238 (405) T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHCC-C T ss_conf 445678853357489999999999875352177199788999999875617998678389978543444304554043-7 Q ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC---CCHHHHHC Q ss_conf 478148986304322210233344544323202466067762025516776532210011113454444---51444300 Q gi|254781097|r 183 DQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCKATLACFFK---DIERYIVE 259 (369) Q Consensus 183 ~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~v~~f~~---~m~~~~~~ 259 (369) T Consensus 239 ~~~~~i~~~--a~~~~~~~k~~~~ll~~l~~l~-~~~~l~~-~G~~~~--------~~~~~v~~lg~~~d~~~La~~Ysa 306 (405) T PRK10125 239 QGKPRIAVV--AHDLRYDGKTDQQLVREMMALG-DKIELHT-FGKFSP--------FTAGNVVNHGFETDKRKLMSALNQ 306 (405) T ss_pred CCCCEEEEE--ECCCCCCCHHHHHHHHHHHHCC-CCEEEEE-EECCCC--------CCCCCEEECCCCCCHHHHHHHHHH T ss_conf 899769999--5454456333899999998448-9708999-725764--------468874646875899999999963 Q ss_pred CCEEEECCC----CHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHH Q ss_conf 448997254----2023334552960487533552489899989999988988998000199899999999986189999 Q gi|254781097|r 260 ANLLICRSG----ALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCL 335 (369) Q Consensus 260 aDlvIsraG----~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l 335 (369) T Consensus 307 Ad~~v~ps~~e~~~~~~~Ea~acg~pvv~~--~--~~g----~~~~~~~~-~g~~~~~~--d~~~la~~i~~~~~~~~~~ 375 (405) T PRK10125 307 MDALVFSSRVDNYPLILCEALSIGVPVIAT--H--SDA----AREVLQKS-GGKTVSEE--EVLQLAQLSKPEIAQAVFG 375 (405) T ss_pred CCEEEECCHHHCCCHHHHHHHHCCCCEEEE--C--CCC----CHHHEECC-CCEEECCC--CHHHHHHHHHHHHHCCHHH T ss_conf 788972746754650899999749988983--5--999----73651158-74596688--9999999899998460467 Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHH Q ss_conf 99999998527832799999999999 Q gi|254781097|r 336 VQMAKQVSMKGKPQAVLMLSDLVEKL 361 (369) Q Consensus 336 ~~m~~~~~~~~~~~aa~~i~~~i~~l 361 (369) T Consensus 376 ~~~~~~~~~~~~~fs~~~~a~~Y~~l 401 (405) T PRK10125 376 TTLAEFSQRSRAAYSGQQMLEEYVNF 401 (405) T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHH T ss_conf 78999999999867999999999999 |
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.3e-06 Score=65.69 Aligned_cols=322 Identities=15% Similarity=0.083 Sum_probs=148.9 Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCC-CCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCC Q ss_conf 256207999999999659839999572376762444-6875168752565653312332111000121101355542034 Q gi|254781097|r 15 GGHVFPAVALSHELKNRGYAVYLITDRRARSFITDF-PADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLRLIKKLK 93 (369) Q Consensus 15 GGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~~~k 93 (369) T Consensus 12 GGVa~~l~~Lv~~~~~lGv~~~w~V~~~~~~ff~~tk~~hn~--Lqg~~~~ls---~~~~~~y~~~-~~~na~~~~~~~~ 85 (372) T cd03792 12 GGVAEILHSLVPLMRDLGVDTRWEVIKGDPEFFNVTKKFHNA--LQGADIELS---EEEKEIYLEW-NEENAERPLLDLD 85 (372) T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCHH--HCCCCCCCC---HHHHHHHHHH-HHHHHHCCCCCCC T ss_conf 769999999999999669816999945983578988750065--419997679---8899999999-9998731310279 Q ss_pred CCEEEECCCCCCH-HHHHHH--HHCCCCCEE--ECCCCCC-HHHHHHHHHHHHHHHC---CCCCC-CCCCCCCCCEEEEC Q ss_conf 4424312653210-247888--623411012--2153200-1567788999998741---34322-22355667325304 Q gi|254781097|r 94 PNVVVGFGGYHSI-SPLLAG--MILRIPSMV--HEQNVIM-GKANRLLSWGVQIIAR---GLVSS-QKKVLLRKIIVTGN 163 (369) Q Consensus 94 PDvVi~tGGy~s~-P~~iaA--~~l~iP~vi--hEqN~v~-G~~nk~l~~~a~~v~~---~~~~~-~~~~~~~k~~~~G~ 163 (369) T Consensus 86 ~DvV~i----Hdpqp~~l~~~~~~~~~~~I~r~Hid~~~~~~~~w~fl~~~i~~~d~~V~~~~~~~~~~~~~-~~~~ip~ 160 (372) T cd03792 86 ADVVVI----HDPQPLALPLFKKKRGRPWIWRCHIDLSSPNRRVWDFLQPYIEDYDAAVFHLPEYVPPQVPP-RKVIIPP 160 (372) T ss_pred CCEEEE----CCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHCCCCCC-CEEEECC T ss_conf 998998----79366789998636899589996886688538899999999985799999735750436887-6478167 Q ss_pred CCCH------HHHHHH-HHHHHHHCCC-CCCEEEEEECCCC-CCCHHHHHHHHHHHHHHHCCCCCEE-EEEECCCC-H-- Q ss_conf 4432------456543-3344331144-7814898630432-2210233344544323202466067-76202551-6-- Q gi|254781097|r 164 PIRS------SLIKMK-DIPYQSSDLD-QPFHLLVFGGSQG-AKVFSDIVPKSIALIPEMQRKRLVI-MQQVREDD-K-- 230 (369) Q Consensus 164 PvR~------~~~~~~-~~~~~~~~~~-~~~~ILv~GGS~G-a~~ln~~v~~~~~~l~~~~~~~~~v-~~~~g~~~-~-- 230 (369) T Consensus 161 ~IDpl~~kn~~l~~~~~~~~~~~~gi~~d~piIl~Vg-Rl~~~Kg~-~~li~A~~~~~~~~-~d~~LvivG~g~~ddpe~ 237 (372) T cd03792 161 SIDPLSGKNRELSPADIEYILEKYGIDPERPYITQVS-RFDPWKDP-FGVIDAYRKVKERV-PDPQLVLVGSGATDDPEG 237 (372) T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE-ECCCCCCH-HHHHHHHHHHHHHC-CCCEEEEECCCCCCCCHH T ss_conf 1066774345589899999999829898995899987-25654686-99999999999768-997899989987778147 Q ss_pred ----HHHHHHHHHCCCCCCCC--CCCC--CCHHHHHCCCEEEECC---C-CHHHHHHHHHCCCEEEEECCCCCCCHHHHH Q ss_conf ----77653221001111345--4444--5144430044899725---4-202333455296048753355248989998 Q gi|254781097|r 231 ----EKVQKQYDELGCKATLA--CFFK--DIERYIVEANLLICRS---G-ALTVSEIAVIGRPAILVPYPHSVDQDQLHN 298 (369) Q Consensus 231 ----~~~~~~~~~~~~~~~v~--~f~~--~m~~~~~~aDlvIsra---G-~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~N 298 (369) T Consensus 238 ~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~l~~~adv~v~~S~~Egfgl~~lEAm~~G~PVVas~----vgG----i 308 (372) T cd03792 238 WIVYEEVLE-YAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGP----VGG----I 308 (372) T ss_pred HHHHHHHHH-HHCCCCCEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCEEECC----CCC----C T ss_conf 899999999-7188996699936888678999999539799957642344469999998699899837----998----3 Q ss_pred HHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHH Q ss_conf 999998898899800019989999999998618999999999998527-83279999999999998 Q gi|254781097|r 299 AYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKG-KPQAVLMLSDLVEKLAH 363 (369) Q Consensus 299 A~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~-~~~aa~~i~~~i~~la~ 363 (369) T Consensus 309 ~e~v~dg~~G~Lv~----~~d~~A~~i~~ll~d~~l~~~mg~~ar~~v~~~f~~~~~~~~yl~L~~ 370 (372) T cd03792 309 PLQIEDGETGFLVD----TVEEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLIS 370 (372) T ss_pred HHHCCCCCCEEECC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH T ss_conf 77604898579889----869999999999749999999999999999987899999999999998 |
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family; InterPro: IPR011875 This entry describes Corynebacterium glutamicum GlgA and closely related proteins in other species | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.4e-07 Score=69.01 Aligned_cols=324 Identities=18% Similarity=0.205 Sum_probs=169.4 Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCEEEEEECHHHHHHHCCCCCCCEEEEEC-CCCCCCCHHHHHHH-----HHHCCCCCHH Q ss_conf 88525620799999999965-98399995723767624446875168752-56565331233211-----1000121101 Q gi|254781097|r 12 GGTGGHVFPAVALSHELKNR-GYAVYLITDRRARSFITDFPADSIYEIVS-SQVRFSNPFVFWNS-----LVILWKAFIA 84 (369) Q Consensus 12 gGTGGHi~palala~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----l~~~~~~~~~ 84 (369) T Consensus 16 GGAGVH---v~~L~~~L~~l~~vdVr~fG~~rteadiPaiPna--~~~~gsL~v~~Y~~~~~L~~GldPran~aL~tfSv 90 (416) T TIGR02149 16 GGAGVH---VEELARELARLVDVDVRCFGDKRTEADIPAIPNA--FFSEGSLKVLGYRPWSELKEGLDPRANKALKTFSV 90 (416) T ss_pred CCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCC--CCCCCCEEEEECCCCHHHCCCCCHHHHHHHCCHHH T ss_conf 887411---8889999986534004643887442334566622--16898328874078743225677225754023115 Q ss_pred HHHHHHHCC-CCEEEECCCCCCHHHHHHHHHCCCCCEE--E--CCCCCC------H-------HHHHHHHHHHHHH-HCC Q ss_conf 355542034-4424312653210247888623411012--2--153200------1-------5677889999987-413 Q gi|254781097|r 85 SLRLIKKLK-PNVVVGFGGYHSISPLLAGMILRIPSMV--H--EQNVIM------G-------KANRLLSWGVQII-ARG 145 (369) Q Consensus 85 ~~~ii~~~k-PDvVi~tGGy~s~P~~iaA~~l~iP~vi--h--EqN~v~------G-------~~nk~l~~~a~~v-~~~ 145 (369) T Consensus 91 DL~m~~d~~~~~vvHsHTWYa~LAG~LAk~Lyd~PlVvTaHSLEP-LRPWK~EQLGgGY~lSsW~EktA~~aAd~vIAVS 169 (416) T TIGR02149 91 DLAMANDVEDADVVHSHTWYAALAGHLAKLLYDVPLVVTAHSLEP-LRPWKKEQLGGGYKLSSWAEKTAIEAADRVIAVS 169 (416) T ss_pred HHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCC-CCCCHHHHCCCCCCCCHHHHHHHHHHCCCEEEHH T ss_conf 788761100271553207888789999999669983997303788-8713175658974202478888998504065311 Q ss_pred C------CCCCCCCCCCCCEEEECCCCHHHHHH-----HHHHHHHHCCCCC-CEEEEEECCCCCCCHHH--HHHHHHHHH Q ss_conf 4------32222355667325304443245654-----3334433114478-14898630432221023--334454432 Q gi|254781097|r 146 L------VSSQKKVLLRKIIVTGNPIRSSLIKM-----KDIPYQSSDLDQP-FHLLVFGGSQGAKVFSD--IVPKSIALI 211 (369) Q Consensus 146 ~------~~~~~~~~~~k~~~~G~PvR~~~~~~-----~~~~~~~~~~~~~-~~ILv~GGS~Ga~~ln~--~v~~~~~~l 211 (369) T Consensus 170 ~amr~DiL~~YP~lD~~kv~Vv~NGId~~~y~~~~~~~~~~v~~~~Gid~~rP~~lFVG------RItRQKGv~~L~~A~ 243 (416) T TIGR02149 170 GAMREDILKVYPDLDPEKVHVVYNGIDTKEYKPAADDDGNKVLDRYGIDRSRPYVLFVG------RITRQKGVPHLLKAV 243 (416) T ss_pred HHCHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEE------EEECCCCHHHHHHHH T ss_conf 10335583158688846468886476457606888874113466326799888789852------020316558999999 Q ss_pred HHHCCCCCEEEEEECCCCH----HHHHHHHHHCCC---C-CCCCCC--CCCCHHHHHCCCEEEECCCC---HHH-HHHHH Q ss_conf 3202466067762025516----776532210011---1-134544--44514443004489972542---023-33455 Q gi|254781097|r 212 PEMQRKRLVIMQQVREDDK----EKVQKQYDELGC---K-ATLACF--FKDIERYIVEANLLICRSGA---LTV-SEIAV 277 (369) Q Consensus 212 ~~~~~~~~~v~~~~g~~~~----~~~~~~~~~~~~---~-~~v~~f--~~~m~~~~~~aDlvIsraG~---~Ti-~E~~~ 277 (369) T Consensus 244 ~~-~~~dvqvVLCAgapDTPEv~~Ev~~~~a~l~~~R~gv~WI~~ml~~~~~~~L~~~A~vFvCPSvYEPLGIvNLEAMA 322 (416) T TIGR02149 244 HL-ISKDVQVVLCAGAPDTPEVAEEVRQAVAKLDREREGVIWIEKMLPKEELVELLSNAEVFVCPSVYEPLGIVNLEAMA 322 (416) T ss_pred HH-CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHH T ss_conf 62-55203598706767872068999999998876169838635658878999998469478648442542055687885 Q ss_pred HCCCEEE-----EECCCCCCCHHHHHHHHHHHCCCEEEEEHHC------------CCHHHHHHHHHHHHCCHHHHHHHHH Q ss_conf 2960487-----5335524898999899999889889980001------------9989999999998618999999999 Q gi|254781097|r 278 IGRPAIL-----VPYPHSVDQDQLHNAYYLQEGGGAKVITENF------------LSPERLAEELCSAMKKPSCLVQMAK 340 (369) Q Consensus 278 ~g~P~Il-----IP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~------------~~~~~l~~~i~~ll~d~~~l~~m~~ 340 (369) T Consensus 323 C~tpVVAS~~GGIp--EV-----------V~dg~TG~LV~~~~lhdGtGtP~d~d~f~~~LA~ai~~ll~dp~~A~k~G~ 389 (416) T TIGR02149 323 CGTPVVASAVGGIP--EV-----------VVDGETGFLVPIDDLHDGTGTPDDDDKFEADLAKAIDALLADPELAKKMGE 389 (416) T ss_pred CCCCEEECCCCCCC--CE-----------EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCH T ss_conf 07863440368955--26-----------833744312470145577888887405689999999997429578988344 Q ss_pred HHHHCCCC-HHHHHHHHHHHHH Q ss_conf 99852783-2799999999999 Q gi|254781097|r 341 QVSMKGKP-QAVLMLSDLVEKL 361 (369) Q Consensus 341 ~~~~~~~~-~aa~~i~~~i~~l 361 (369) T Consensus 390 aGr~R~~~~FSW~~iA~kT~~~ 411 (416) T TIGR02149 390 AGRKRAVEEFSWESIAKKTVEL 411 (416) T ss_pred HHHHHHHHCCCHHHHHHHHHHH T ss_conf 3465542125757899999999 |
This enzyme is required for glycogen biosynthesis and appears to replace the distantly related IPR011835 from INTERPRO, family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor .. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain; InterPro: IPR012822 This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS) | Back alignment and domain information |
|---|
Probab=98.76 E-value=2e-06 Score=64.38 Aligned_cols=305 Identities=18% Similarity=0.199 Sum_probs=171.1 Q ss_pred CCHHHHHHHHHHHHHHHHCCC--EEEEEE----C----HHHHHHHCCC-CCCCEEEEECCCCCCCCHHHHHHHHHHCCCC Q ss_conf 852562079999999996598--399995----7----2376762444-6875168752565653312332111000121 Q gi|254781097|r 13 GTGGHVFPAVALSHELKNRGY--AVYLIT----D----RRARSFITDF-PADSIYEIVSSQVRFSNPFVFWNSLVILWKA 81 (369) Q Consensus 13 GTGGHi~palala~~L~~~g~--~v~~~~----~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (369) T Consensus 24 DTGGQ~~YVlELar~La~~~ev~qVdlvTR~I~D~~vspDYA~~~E~i~p~ArIvRl~fGP~rYLRKE~LWPyLD~~~D- 102 (445) T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIERIAPKARIVRLPFGPRRYLRKELLWPYLDELAD- 102 (445) T ss_pred CCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH- T ss_conf 6343377888889986158975147677503431776802334776408995599745788855740156600789999- Q ss_pred CHHHHHHHH--HCCCCEEEE---CCCCCCHHHHHHHHHCCCCCEE--ECCCCCCHHH--HHHHH---------------- Q ss_conf 101355542--034442431---2653210247888623411012--2153200156--77889---------------- Q gi|254781097|r 82 FIASLRLIK--KLKPNVVVG---FGGYHSISPLLAGMILRIPSMV--HEQNVIMGKA--NRLLS---------------- 136 (369) Q Consensus 82 ~~~~~~ii~--~~kPDvVi~---tGGy~s~P~~iaA~~l~iP~vi--hEqN~v~G~~--nk~l~---------------- 136 (369) T Consensus 103 --~~l~ylr~~g~lPdlIH~HYADAGYVG---~~ls~~L~vPlvfTGH---S-LGR~Kr~RLLa~G~~skaPkP~~~IE~ 173 (445) T TIGR02472 103 --QLLSYLRQQGRLPDLIHAHYADAGYVG---ARLSRLLGVPLVFTGH---S-LGREKRRRLLAAGLKSKAPKPPQEIEK 173 (445) T ss_pred --HHHHHHHHCCCCCCCCHHHHCCHHHHH---HHHHHHCCCCEEEECC---C-CCHHHHHHHHHCCCCCCCCCCHHHHHH T ss_conf --999999735888873101010155899---9998625898488375---3-577899999843400267887789998 Q ss_pred ---------------HHHHHHHCCCCCC-------CCCCCCCCCEEEECCCC-HHHHH---------HHHHHHHHHCCCC Q ss_conf ---------------9999874134322-------22355667325304443-24565---------4333443311447 Q gi|254781097|r 137 ---------------WGVQIIARGLVSS-------QKKVLLRKIIVTGNPIR-SSLIK---------MKDIPYQSSDLDQ 184 (369) Q Consensus 137 ---------------~~a~~v~~~~~~~-------~~~~~~~k~~~~G~PvR-~~~~~---------~~~~~~~~~~~~~ 184 (369) T Consensus 174 ~f~is~RI~AEE~tL~~AslvitST~QEi~~QY~~Y~~y~P~r~~VIPPGvD~~rFyp~~~~~~~~~i~~~L~rFL~~p~ 253 (445) T TIGR02472 174 QFNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYDPERMEVIPPGVDLSRFYPPQSSEEDSEIDKLLARFLKDPE 253 (445) T ss_pred HHCCCCCHHHHHHHHHHCCEEEEECCCEEHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC T ss_conf 61226414788999851474586145103212101478670211351788887543478888887588875223114788 Q ss_pred CCEEEEEECCCCCCCHH----HHHHHHHHHHHHH-CCCCCEEEEEECCCCHHHHHHHHHH-------CCCCCCCCCC--- Q ss_conf 81489863043222102----3334454432320-2466067762025516776532210-------0111134544--- Q gi|254781097|r 185 PFHLLVFGGSQGAKVFS----DIVPKSIALIPEM-QRKRLVIMQQVREDDKEKVQKQYDE-------LGCKATLACF--- 249 (369) Q Consensus 185 ~~~ILv~GGS~Ga~~ln----~~v~~~~~~l~~~-~~~~~~v~~~~g~~~~~~~~~~~~~-------~~~~~~v~~f--- 249 (369) T Consensus 254 KP~ilai--s---Rpd~RKNi~~Lv~aYG~~p~L~~~aNLVlvlG~RdD-~r~me~~qR~Vl~~vl~~iD~YDLYGkvAy 327 (445) T TIGR02472 254 KPPILAI--S---RPDRRKNIPALVEAYGRSPKLQEMANLVLVLGSRDD-IRKMESSQREVLTEVLLLIDRYDLYGKVAY 327 (445) T ss_pred CCEEEEE--C---CCCCCCCHHHHHHHHCCCHHHHHHCCEEEEECCCCC-HHHCHHHHHHHHHHHHHHHCCCCCCCCCCC T ss_conf 7838872--2---788766745556200788667652080887527788-531215789999999876300024564026 Q ss_pred -----CCCCHHHHHCCCE--------EEECCCCHHHHHHHHHCCCEEEEECCCCCCCH-HHHHHHHHHHCCCEEEEEHHC Q ss_conf -----4451444300448--------99725420233345529604875335524898-999899999889889980001 Q gi|254781097|r 250 -----FKDIERYIVEANL--------LICRSGALTVSEIAVIGRPAILVPYPHSVDQD-QLHNAYYLQEGGGAKVITENF 315 (369) Q Consensus 250 -----~~~m~~~~~~aDl--------vIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~h-Q~~NA~~l~~~G~a~~i~~~~ 315 (369) T Consensus 328 PK~H~~~dvP~lYRLAA~~rGiFVNPALTEPFGLTLlEAAAcGLPivAT-----~DGGP~----dI~~~C~NGLLvd--~ 396 (445) T TIGR02472 328 PKHHRPDDVPELYRLAARRRGIFVNPALTEPFGLTLLEAAACGLPIVAT-----EDGGPR----DIIANCRNGLLVD--V 396 (445) T ss_pred CCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCCCCEEEC-----CCCCCH----HHHHHCCCCCEEC--C T ss_conf 8888811232678999865986762721253016899999769972107-----864866----8884288875005--7 Q ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHHHH Q ss_conf 99899999999986189999999999985 Q gi|254781097|r 316 LSPERLAEELCSAMKKPSCLVQMAKQVSM 344 (369) Q Consensus 316 ~~~~~l~~~i~~ll~d~~~l~~m~~~~~~ 344 (369) T Consensus 397 ld~e~i~~AL~~alsd~~QW~~Ws~NGi~ 425 (445) T TIGR02472 397 LDLEAIASALEQALSDSSQWQTWSDNGIE 425 (445) T ss_pred CCHHHHHHHHHHHCCCHHHHHHHHHHHHH T ss_conf 89899999999733890667899985577 |
The C-terminal domain (IPR012821 from INTERPRO), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant sucrose phosphate synthase (SPS). At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.. |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.7e-05 Score=57.98 Aligned_cols=333 Identities=12% Similarity=0.070 Sum_probs=149.9 Q ss_pred CCCCCEEEEEC-CCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECC----CCCCCCHH----HH Q ss_conf 99887699987-88525620799999999965983999957237676244468751687525----65653312----33 Q gi|254781097|r 1 MSENNVILLVA-GGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSS----QVRFSNPF----VF 71 (369) Q Consensus 1 M~~~~~ili~~-gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----~~ 71 (369) T Consensus 1 ~~~~~~Iv~~s~~~W~~~~qRpQhl~~~la~~g~rVlyv~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 79 (373) T cd04950 1 MADRPDILVFSADDWDFLWQRPQHLAARLAERGNRVLYVEPPGLSRTPQPR-GRDWVRVVLRLRAALRRPRRLDPLIPAR 79 (373) T ss_pred CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCC-CHHHHHHHHCCCCCCCCCCCCCCCCCCH T ss_conf 998998899627897876748899999999689869999189875444543-1133442312454346766667666302 Q ss_pred -HHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEE---CCCCCCHHHH------HHHHHHHHH Q ss_conf -211100012110135554203444243126532102478886234110122---1532001567------788999998 Q gi|254781097|r 72 -WNSLVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVH---EQNVIMGKAN------RLLSWGVQI 141 (369) Q Consensus 72 -~~~l~~~~~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vih---EqN~v~G~~n------k~l~~~a~~ 141 (369) T Consensus 80 ~~~~~~~~l~~~l~~~~~~~~~~~~ilw~~---~P~~~~~~~~l~~~~vVYdcvDd~~~~~~~~~~~~~~e~~l~~~ad~ 156 (373) T cd04950 80 RRRLLRLLLNALLFWAQLELGFGRPILWYY---TPYTLPVAALLQASLVVYDCVDDLSAFPGGPPELLEAERRLLKRADL 156 (373) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEEC---CCCHHHHHHHCCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHCCE T ss_conf 668899999999999998628997399981---73068898753788389995061221379868999999999997799 Q ss_pred HHCCCCCCCCCC--CCCCCEEEECCCCHHHHHHHHHHH--HH-HCCCCCCEEEEEECCCCCCCHH-HHHHHHHHHHHHHC Q ss_conf 741343222235--566732530444324565433344--33-1144781489863043222102-33344544323202 Q gi|254781097|r 142 IARGLVSSQKKV--LLRKIIVTGNPIRSSLIKMKDIPY--QS-SDLDQPFHLLVFGGSQGAKVFS-DIVPKSIALIPEMQ 215 (369) Q Consensus 142 v~~~~~~~~~~~--~~~k~~~~G~PvR~~~~~~~~~~~--~~-~~~~~~~~ILv~GGS~Ga~~ln-~~v~~~~~~l~~~~ 215 (369) T Consensus 157 v~~ts~~L~~~~~~~~~~~~~i~nGvD~~~F~~~~~~~~~~~~~~~~~~p-~igy~G~i~~-~~D~~ll~~~a~~~---- 230 (373) T cd04950 157 VFTTSPSLYEAKRRLNPNVVLVPNGVDYEHFAAARDPPPPPADLAALPRP-VIGYYGAIAE-WLDLELLEALAKAR---- 230 (373) T ss_pred EEECCHHHHHHHHHCCCCEEEECCEECHHHHHHHCCCCCCCHHHCCCCCC-EEEEEECCCC-CCCHHHHHHHHHHC---- T ss_conf 99859999998874699989988821788841001576880455047998-8999925752-14899999999988---- Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCC--CCCHHHHHCCCEEEE--------CCC-CHHHHHHHHHCCCEEE Q ss_conf 46606776202551677653221001111345444--451444300448997--------254-2023334552960487 Q gi|254781097|r 216 RKRLVIMQQVREDDKEKVQKQYDELGCKATLACFF--KDIERYIVEANLLIC--------RSG-ALTVSEIAVIGRPAIL 284 (369) Q Consensus 216 ~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~v~~f~--~~m~~~~~~aDlvIs--------raG-~~Ti~E~~~~g~P~Il 284 (369) T Consensus 231 -p~~~~~liG-p~~~~~~~~~l~~-~~Nv~~lG~~~~~~lp~~l~~~Dv~l~P~~~~~~t~~~~P~Kl~EYlA~G~PVVs 307 (373) T cd04950 231 -PDWSFVLIG-PVDVSIDPSALLR-LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVA 307 (373) T ss_pred -CCCEEEEEE-CCCCCCCHHHHHC-CCCEEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHCCCCCHHHHHHHCCCCEEE T ss_conf -996899994-3887558345625-9987984898999999999857877741205545424686379999866998896 Q ss_pred EECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHCCCCHHHHHHHHHHHH Q ss_conf 53355248989998999998898899800019989999999998618--99999999999852783279999999999 Q gi|254781097|r 285 VPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKK--PSCLVQMAKQVSMKGKPQAVLMLSDLVEK 360 (369) Q Consensus 285 IP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d--~~~l~~m~~~~~~~~~~~aa~~i~~~i~~ 360 (369) T Consensus 308 t~~~~~~-----------~~~~~~~~~~~---~~~~F~~~i~~al~~~~~~~~~~~~~~a~~~sW~~r~~~~~~~i~~ 371 (373) T cd04950 308 TPLPEVR-----------RYEDEVVLIAD---DPEEFVAAIEKALLEDGPARERRRLRLAAQNSWDARAAEMLEALQE 371 (373) T ss_pred CCCHHHH-----------HCCCCEEEECC---CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH T ss_conf 5848877-----------31686799779---9999999999998438928899999999979999999999999975 |
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.9e-05 Score=57.52 Aligned_cols=329 Identities=17% Similarity=0.171 Sum_probs=156.0 Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH--HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCC Q ss_conf 88769998788525620799999999965983999957237--6762444687516875256565331233211100012 Q gi|254781097|r 3 ENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRA--RSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWK 80 (369) Q Consensus 3 ~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (369) T Consensus 2 ~~~~v~V~VLGDiGrSPRMqYHA~Sla~~g~~V~lvGy~~s~p~~~i~~~~~I~i~~l~~~p~~~~~l~~~l~~~~Kvl~ 81 (415) T cd03816 2 KRKRVCVLVLGDIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEILSNPNITIHPLPPPPQRLNKLPFLLFAPLKVLW 81 (415) T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH T ss_conf 96579999816778987889999999848987999987899988888519966999778888655545199999999999 Q ss_pred CCHHHHH-HHHHCCCCEEEECCCCCCHHHH----HHHHHCCCCCEE--ECCC-CCCH----HHH----------HHHHHH Q ss_conf 1101355-5420344424312653210247----888623411012--2153-2001----567----------788999 Q gi|254781097|r 81 AFIASLR-LIKKLKPNVVVGFGGYHSISPL----LAGMILRIPSMV--HEQN-VIMG----KAN----------RLLSWG 138 (369) Q Consensus 81 ~~~~~~~-ii~~~kPDvVi~tGGy~s~P~~----iaA~~l~iP~vi--hEqN-~v~G----~~n----------k~l~~~ 138 (369) T Consensus 82 Q~~~L~~~L~~~~~~~~iLvQ-NPPsiPtl~v~~l~~~lr~~klIIDWHN~gyTIL~l~~g~~h~lV~~~k~~E~~fgr~ 160 (415) T cd03816 82 QFFSLLWLLYKLRPADYILIQ-NPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEKLFGRL 160 (415) T ss_pred HHHHHHHHHHHCCCCCEEEEE-CCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCC T ss_conf 999999999835787579841-8876436999999999828829999058775122057888873899999999875503 Q ss_pred HHHHHCCCCCCCCCCC-----CCCCEEE-EC------CCC-----HHHHHHHHHHH-------HHHCCCCCCEEEEEECC Q ss_conf 9987413432222355-----6673253-04------443-----24565433344-------33114478148986304 Q gi|254781097|r 139 VQIIARGLVSSQKKVL-----LRKIIVT-GN------PIR-----SSLIKMKDIPY-------QSSDLDQPFHLLVFGGS 194 (369) Q Consensus 139 a~~v~~~~~~~~~~~~-----~~k~~~~-G~------PvR-----~~~~~~~~~~~-------~~~~~~~~~~ILv~GGS 194 (369) T Consensus 161 a~~~lcVT~AM~~~L~~~~~~~~~~~vlyDrP~~~F~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~llVSSTS 240 (415) T cd03816 161 ADYNLCVTKAMKEDLQQFNNWKIRATVLYDRPPEQFRPLPLEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTS 240 (415) T ss_pred CCEEECCCHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCC T ss_conf 64605406899999986026688879982288897598867899999974355423233466531135777338995167 Q ss_pred C-CCCCHHHHHHHHHHHHHHHC-----CCCCEEEEEECCCC-HHHHHHHHHHCC-CCCCCC-CC--CCCCHHHHHCCCEE Q ss_conf 3-22210233344544323202-----46606776202551-677653221001-111345-44--44514443004489 Q gi|254781097|r 195 Q-GAKVFSDIVPKSIALIPEMQ-----RKRLVIMQQVREDD-KEKVQKQYDELG-CKATLA-CF--FKDIERYIVEANLL 263 (369) Q Consensus 195 ~-Ga~~ln~~v~~~~~~l~~~~-----~~~~~v~~~~g~~~-~~~~~~~~~~~~-~~~~v~-~f--~~~m~~~~~~aDlv 263 (369) T Consensus 241 WTpDEDF~-iLl~AL~~Yd~~~~~~~~~p~l-l~iITGKGP~K~~y~~~I~~~~l~~V~i~t~wL~~eDYP~lL~~ADLG 318 (415) T cd03816 241 WTPDEDFG-ILLDALVAYEKSAATGPKLPKL-LCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLG 318 (415) T ss_pred CCCCCCHH-HHHHHHHHHHHHHHCCCCCCCE-EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCC T ss_conf 77765567-8999999997653214789987-999968853089999999862888219972578878899987415347 Q ss_pred EEC----CCC---HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC-CEEEEEHHCCCHHHHHHHHHHHHCC---H Q ss_conf 972----542---0233345529604875335524898999899999889-8899800019989999999998618---9 Q gi|254781097|r 264 ICR----SGA---LTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGG-GAKVITENFLSPERLAEELCSAMKK---P 332 (369) Q Consensus 264 Isr----aG~---~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G-~a~~i~~~~~~~~~l~~~i~~ll~d---~ 332 (369) T Consensus 319 VsLHtSSSGlDLPMKVVDMfG~GlPV~A~~f~~i---------~ELVk~~~NG~~F~----~~~eL~~~l~~l~~~~p~~ 385 (415) T cd03816 319 VSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCI---------DELVKHGENGLVFG----DSEELAEQLIDLLSNFPNR 385 (415) T ss_pred EEECCCCCCCCCCHHHHHHCCCCCCEEEECCCCH---------HHHHCCCCCCCEEC----CHHHHHHHHHHHHHCCCCH T ss_conf 2421268766777021010268875798337517---------87722687876657----8999999999998559966 Q ss_pred HHHHHHHHHHHHCCC Q ss_conf 999999999985278 Q gi|254781097|r 333 SCLVQMAKQVSMKGK 347 (369) Q Consensus 333 ~~l~~m~~~~~~~~~ 347 (369) T Consensus 386 ~~l~~lk~~a~~~~~ 400 (415) T cd03816 386 GKLNSLKKGAQEESE 400 (415) T ss_pred HHHHHHHHHHHHHCC T ss_conf 899999977777414 |
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >KOG2941 consensus | Back alignment and domain information |
|---|
Probab=98.24 E-value=0.00067 Score=46.76 Aligned_cols=326 Identities=17% Similarity=0.202 Sum_probs=156.8 Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEE---CHHHHHHHCCCCCCCEEEEECCCCCCCCHHH---HHHH Q ss_conf 998876999878852562079999999996598399995---7237676244468751687525656533123---3211 Q gi|254781097|r 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLIT---DRRARSFITDFPADSIYEIVSSQVRFSNPFV---FWNS 74 (369) Q Consensus 1 M~~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 74 (369) T Consensus 9 ~~~k~ra~vvVLGDvGRSPRMqYHA~Sla~~gf~VdliGy~~s~p~e~l~~-hprI~ih~m~~l~~~~~~p~~~~l~lKv 87 (444) T KOG2941 9 KSKKKRAIVVVLGDVGRSPRMQYHALSLAKLGFQVDLIGYVESIPLEELLN-HPRIRIHGMPNLPFLQGGPRVLFLPLKV 87 (444) T ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHC-CCCEEEEECCCCCCCCCCCHHHHHHHHH T ss_conf 665552799993466787477899999997277278987317887688715-8963897279875257786224448999 Q ss_pred HHHCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH----CCCCCEE--E-------------CCCCCC---HHHH Q ss_conf 1000121101355542034442431265321024788862----3411012--2-------------153200---1567 Q gi|254781097|r 75 LVILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMI----LRIPSMV--H-------------EQNVIM---GKAN 132 (369) Q Consensus 75 l~~~~~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~----l~iP~vi--h-------------EqN~v~---G~~n 132 (369) T Consensus 88 f~Qfl~-Ll--~aL~~~~~~~~ilvQ-NPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~E 163 (444) T KOG2941 88 FWQFLS-LL--WALFVLRPPDIILVQ-NPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWLE 163 (444) T ss_pred HHHHHH-HH--HHHHHCCCCCEEEEE-CCCCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHH T ss_conf 999999-99--999824688589972-89987347999999987366589970225789998864288870588999999 Q ss_pred HHHHHHHHHHHCCCCCCCCCCC------CCCCEEEEC-----CCC--HH-HHHH------------H-----HHHHHHH- Q ss_conf 7889999987413432222355------667325304-----443--24-5654------------3-----3344331- Q gi|254781097|r 133 RLLSWGVQIIARGLVSSQKKVL------LRKIIVTGN-----PIR--SS-LIKM------------K-----DIPYQSS- 180 (369) Q Consensus 133 k~l~~~a~~v~~~~~~~~~~~~------~~k~~~~G~-----PvR--~~-~~~~------------~-----~~~~~~~- 180 (369) T Consensus 164 ~~fgk~a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~ 243 (444) T KOG2941 164 KYFGKLADYNLCVTKAMREDLIQNWGINRAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKD 243 (444) T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHC T ss_conf 98613343222458889999987338740489822798889855677888865335554244224333012245676513 Q ss_pred ------CCCCCCEEEEEECCCCC---CCHHHHHHHHHHHH----H-H-HCCCCCEEEEEECCCCH-HHHHHHHHHCCC-C Q ss_conf ------14478148986304322---21023334454432----3-2-02466067762025516-776532210011-1 Q gi|254781097|r 181 ------DLDQPFHLLVFGGSQGA---KVFSDIVPKSIALI----P-E-MQRKRLVIMQQVREDDK-EKVQKQYDELGC-K 243 (369) Q Consensus 181 ------~~~~~~~ILv~GGS~Ga---~~ln~~v~~~~~~l----~-~-~~~~~~~v~~~~g~~~~-~~~~~~~~~~~~-~ 243 (369) T Consensus 244 ~s~~v~~~~~~pallvs--STswTpDEdf~-ILL~AL~~y~~~~~~~~~~lP~l-lciITGKGPlkE~Y~~~I~~~~~~~ 319 (444) T KOG2941 244 ASGDVQLLPERPALLVS--STSWTPDEDFG-ILLEALVIYEEQLYDKTHNLPSL-LCIITGKGPLKEKYSQEIHEKNLQH 319 (444) T ss_pred CCCHHHHCCCCCEEEEE--CCCCCCCCCHH-HHHHHHHHHHHHHHHCCCCCCCE-EEEECCCCCHHHHHHHHHHHHCCCC T ss_conf 44123314678758995--37878763278-99999986455540135799737-9999278831689999987715321 Q ss_pred CCC-CCC--CCCCHHHHHCCCEEEEC----CCC---HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEH Q ss_conf 134-544--44514443004489972----542---02333455296048753355248989998999998898899800 Q gi|254781097|r 244 ATL-ACF--FKDIERYIVEANLLICR----SGA---LTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITE 313 (369) Q Consensus 244 ~~v-~~f--~~~m~~~~~~aDlvIsr----aG~---~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~ 313 (369) T Consensus 320 v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl----~----ELVkh~eNGlvF~- 390 (444) T KOG2941 320 VQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCL----D----ELVKHGENGLVFE- 390 (444) T ss_pred EEEEECCCCCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCEEEECCHHH----H----HHHHCCCCCEEEC- T ss_conf 036502232110066763143134763047666764667776257874366456538----9----9985677853750- Q ss_pred HCCCHHHHHHHHHHHHC----CHHHHHHHHHHHHHCCC Q ss_conf 01998999999999861----89999999999985278 Q gi|254781097|r 314 NFLSPERLAEELCSAMK----KPSCLVQMAKQVSMKGK 347 (369) Q Consensus 314 ~~~~~~~l~~~i~~ll~----d~~~l~~m~~~~~~~~~ 347 (369) T Consensus 391 ---Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e 425 (444) T KOG2941 391 ---DSEELAEQLQMLFKNFPDNADELNQLKKNLREEQE 425 (444) T ss_pred ---CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH T ss_conf ---59999999999985499987899999986578776 |
|
| >KOG1111 consensus | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.002 Score=43.50 Aligned_cols=316 Identities=15% Similarity=0.199 Sum_probs=150.2 Q ss_pred ECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCC--CCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHH Q ss_conf 87885256207999999999659839999572376762444--6875168752565653312332111000121101355 Q gi|254781097|r 10 VAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDF--PADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLR 87 (369) Q Consensus 10 ~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 87 (369) T Consensus 13 ~~ggveshi---y~lSq~li~lghkVvvithayg~r~girylt~glkVyylp~~v~~n~tT~------ptv~~~~Pllr~ 83 (426) T KOG1111 13 STGGVESHI---YALSQCLIRLGHKVVVITHAYGNRVGIRYLTNGLKVYYLPAVVGYNQTTF------PTVFSDFPLLRP 83 (426) T ss_pred CCCCHHHHH---HHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCEEEEEEEEEEECCCCC------HHHHCCCHHHHH T ss_conf 888711368---88751166518769998432367125056547726999853765546412------021046701226 Q ss_pred HHHHCCCCEEEECCCCCCH--HHHHHHHHCCCCCEE--ECCCCCCH-------HHHHHHH----HHHHHHHCCCCCCC-- Q ss_conf 5420344424312653210--247888623411012--21532001-------5677889----99998741343222-- Q gi|254781097|r 88 LIKKLKPNVVVGFGGYHSI--SPLLAGMILRIPSMV--HEQNVIMG-------KANRLLS----WGVQIIARGLVSSQ-- 150 (369) Q Consensus 88 ii~~~kPDvVi~tGGy~s~--P~~iaA~~l~iP~vi--hEqN~v~G-------~~nk~l~----~~a~~v~~~~~~~~-- 150 (369) T Consensus 84 i~lrE~I~ivhghs~fS~lahe~l~hartMGlktVfTdHS---lfGfad~~si~~n~ll~~sL~~id~~IcVshtskent 160 (426) T KOG1111 84 ILLRERIEIVHGHSPFSYLAHEALMHARTMGLKTVFTDHS---LFGFADIGSILTNKLLPLSLANIDRIICVSHTSKENT 160 (426) T ss_pred HHHHHCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCC---CCCCCCHHHHHHCCEEEEEECCCCCEEEEEECCCCCE T ss_conf 7654116899657708889999999887458259985243---1142331244211121367237880799861378861 Q ss_pred ---CCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCC-CEEEEEEC---CCCCCCHHHHHHHHHHHHHHHCCCCCEEEE Q ss_conf ---23556673253044432456543334433114478-14898630---432221023334454432320246606776 Q gi|254781097|r 151 ---KKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQP-FHLLVFGG---SQGAKVFSDIVPKSIALIPEMQRKRLVIMQ 223 (369) Q Consensus 151 ---~~~~~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~-~~ILv~GG---S~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~ 223 (369) T Consensus 161 vlr~~L~p~kvsvIPnAv~~~~f~P~~~~--~--~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~-----p~vrfii 231 (426) T KOG1111 161 VLRGALAPAKVSVIPNAVVTHTFTPDAAD--K--PSADIITIVVASRLVYRKGIDLLLEIIPSVCDKH-----PEVRFII 231 (426) T ss_pred EEEECCCHHHEEECCCEEECCCCCCCCCC--C--CCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHCC-----CCEEEEE T ss_conf 79721477675533523540334658434--6--8887069999741111242678999999997359-----8736999 Q ss_pred -EECCC--CHHHHHHHHHHCCCCCCCCCCC--CCCHHHHHCCCEEEECC----CCHHHHHHHHHCCCEEE-----EECCC Q ss_conf -20255--1677653221001111345444--45144430044899725----42023334552960487-----53355 Q gi|254781097|r 224 -QVRED--DKEKVQKQYDELGCKATLACFF--KDIERYIVEANLLICRS----GALTVSEIAVIGRPAIL-----VPYPH 289 (369) Q Consensus 224 -~~g~~--~~~~~~~~~~~~~~~~~v~~f~--~~m~~~~~~aDlvIsra----G~~Ti~E~~~~g~P~Il-----IP~p~ 289 (369) T Consensus 232 ~GDGPk~i~lee~lEk~~-l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIp--e 308 (426) T KOG1111 232 IGDGPKRIDLEEMLEKLF-LQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIP--E 308 (426) T ss_pred ECCCCCCCHHHHHHHHHH-CCCCEEEECCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCC--C T ss_conf 568865021999999850-0480588614661788888763857962078888899999987079779975148866--5 Q ss_pred CCCCHHHHHHHHHHHCCCEEEEEHH--CCCHHHHHHHHHHHHCCHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHH Q ss_conf 2489899989999988988998000--19989999999998618999999999998-5278327999999999999855 Q gi|254781097|r 290 SVDQDQLHNAYYLQEGGGAKVITEN--FLSPERLAEELCSAMKKPSCLVQMAKQVS-MKGKPQAVLMLSDLVEKLAHVK 365 (369) Q Consensus 290 a~~~hQ~~NA~~l~~~G~a~~i~~~--~~~~~~l~~~i~~ll~d~~~l~~m~~~~~-~~~~~~aa~~i~~~i~~la~~k 365 (369) T Consensus 309 VLP~d-------------~i~~~~~~~~dl~~~v~~ai~~~~~~p~~~h---~~v~~~y~w~dVa~rTekvy~r~~~t~ 371 (426) T KOG1111 309 VLPED-------------MITLGEPGPDDLVGAVEKAITKLRTLPLEFH---DRVKKMYSWKDVAERTEKVYDRAATTS 371 (426) T ss_pred CCCCC-------------CEECCCCCHHHHHHHHHHHHHHHCCCCHHHH---HHHHHHCCHHHHHHHHHHHHHHHHHCC T ss_conf 48701-------------0223689857778899999987415804577---887776138989988899998876315 |
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.055 Score=33.41 Aligned_cols=325 Identities=19% Similarity=0.205 Sum_probs=171.5 Q ss_pred CCHHHHHHHHHHHHHHHHC-CCEEEEE-ECHHH-----HHHHCCCCCC-CEEEEECCCCCCCCHHHHHHHHHHCCCCCHH Q ss_conf 8525620799999999965-9839999-57237-----6762444687-5168752565653312332111000121101 Q gi|254781097|r 13 GTGGHVFPAVALSHELKNR-GYAVYLI-TDRRA-----RSFITDFPAD-SIYEIVSSQVRFSNPFVFWNSLVILWKAFIA 84 (369) Q Consensus 13 GTGGHi~palala~~L~~~-g~~v~~~-~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (369) T Consensus 8 g~~p~~~~~~p~~~~~~~~p~~~~~~~~~~~h~~~~~~~~~~~~~~~~~p~~~~~~~~~-g~~~~~~~------~~~l~~ 80 (380) T TIGR00236 8 GTRPEAIKLAPLIRALLKDPGIDWKVLHTGQHRDEEMLDQVLDLFSLPNPDYDLNIGSP-GQTLGEIT------GGLLEG 80 (380) T ss_pred CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC-CCHHHHHH------HHHHHH T ss_conf 67620356657899986268852256750320014678999988622575444423576-63047788------888876 Q ss_pred HHHHHHHCCCCEEEECCCCC-CHHHHHHHHHCCCCCEEECC--------CCCCHHHHHHHHH-HHHHHHCCCCCCC---- Q ss_conf 35554203444243126532-10247888623411012215--------3200156778899-9998741343222---- Q gi|254781097|r 85 SLRLIKKLKPNVVVGFGGYH-SISPLLAGMILRIPSMVHEQ--------NVIMGKANRLLSW-GVQIIARGLVSSQ---- 150 (369) Q Consensus 85 ~~~ii~~~kPDvVi~tGGy~-s~P~~iaA~~l~iP~vihEq--------N~v~G~~nk~l~~-~a~~v~~~~~~~~---- 150 (369) T Consensus 81 ~~~~~~~~~p~~~~~~gd~~~~~~~~l~~~~~~~~~gh~~~gl~~~~~~~p~p~~~~~~~~~~~~~~~~~p~~~~~~~l~ 160 (380) T TIGR00236 81 LEELLLEEKPDVVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGDLYSPFPEELNRVLTGHIAKLHFAPTELAKENLL 160 (380) T ss_pred HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH T ss_conf 78886414886789716621467778877765301013320111244557760567778988777642032156677776 Q ss_pred -CCCCCCCCEEEECCCCHHHHHHHHHH-----HHH-HCC-----CCCCEEEEEEC---CCC-CCCHHHHHHHHHHHHHHH Q ss_conf -23556673253044432456543334-----433-114-----47814898630---432-221023334454432320 Q gi|254781097|r 151 -KKVLLRKIIVTGNPIRSSLIKMKDIP-----YQS-SDL-----DQPFHLLVFGG---SQG-AKVFSDIVPKSIALIPEM 214 (369) Q Consensus 151 -~~~~~~k~~~~G~PvR~~~~~~~~~~-----~~~-~~~-----~~~~~ILv~GG---S~G-a~~ln~~v~~~~~~l~~~ 214 (369) T Consensus 161 ~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~h~~~~~~~~~~~~~~-~~~~~~~~~~ 239 (380) T TIGR00236 161 REGVEPGKIFVTGNTVIDALLTNLEIAEPSSPVLSEFGENYPFVPDDRVLLLTLHRRENVGNPEPLENI-LEAILEILEE 239 (380) T ss_pred HCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEEHHHHCCCCHHHHHHH-HHHHHHHHHH T ss_conf 305554505762205677787766542101550234225677320454446540011046760146899-9999998741 Q ss_pred CCCCCEEEEEECC--CCHHH---HHHHHHHCCCCCCC---CCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEE Q ss_conf 2466067762025--51677---65322100111134---5444451444300448997254202333455296048753 Q gi|254781097|r 215 QRKRLVIMQQVRE--DDKEK---VQKQYDELGCKATL---ACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVP 286 (369) Q Consensus 215 ~~~~~~v~~~~g~--~~~~~---~~~~~~~~~~~~~v---~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP 286 (369) T Consensus 240 ~-~~~~~~~p~h~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~-~~~~~~~~~~~~l~d~gg~~-~~~~~~~~p~~~~~ 315 (380) T TIGR00236 240 F-PDVAIVFPVHPNPKVREPEFGLYKALGD-AKRVFLIEPLGYL-DFLLLLSNAYLILTDSGGLQ-EEAPSLGKPVLVLR 315 (380) T ss_pred C-CCCEEEEECCCCCCCCHHHHHHHHHHCC-CCCEEEECCHHHH-HHHHHHHCCEEEEECCCCCC-HHHHHCCCCEEEEE T ss_conf 2-4303566214564210023104666325-6635775513478-88887532416873477630-01121277437750 Q ss_pred CCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH Q ss_conf 35524898999899999889889980001998999999999861899999999999852783279999999999 Q gi|254781097|r 287 YPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEK 360 (369) Q Consensus 287 ~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~ 360 (369) T Consensus 316 --~~~~~------p~~~~~g~~~l~g~---~~~~~~~~~~~~l~~p~~~~~~~~~~~p~g~g~~~~~~~~~~~~ 378 (380) T TIGR00236 316 --DTTER------PEAVEAGTNKLVGT---DKEKITKAAGRLLSDPDEYRKMSNAENPYGDGEASERIVEELLN 378 (380) T ss_pred --CCCCC------CCHHHCCCEEEECC---CHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH T ss_conf --35666------42010032001046---67889999998731726788886412656774146899999860 |
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA , . The protein from rat liver displays both epimerase and kinase activity .; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process. |
| >pfam04101 Glyco_tran_28_C Glycosyltransferase family 28 C-terminal domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=295.49 Aligned_cols=167 Identities=32% Similarity=0.491 Sum_probs=158.7 Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEC Q ss_conf 48986304322210233344544323202466067762025516776532210011113454444514443004489972 Q gi|254781097|r 187 HLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCKATLACFFKDIERYIVEANLLICR 266 (369) Q Consensus 187 ~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlvIsr 266 (369) T Consensus 1 TiLV~GGSqGa~~lN~~v~~~~~~~~~~-~~~~~vihq~G~~~~~~~~~~~~~~~~~~~~~~f~~~m~~~~~~adlvIsR 79 (167) T pfam04101 1 TIFVTGGSQGAQALNRLVLEVDPLLELK-GIEYQVLHQTGKSDYEPVNCKYSKFGINVEVFPFIDNMAEYIKAADLVISR 79 (167) T ss_pred CEEEEECHHHHHHHHHHHHHHHHHHHHC-CCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCHHHHC T ss_conf 9899954488999999999999998753-998299998597358999999860599889971255599999966068865 Q ss_pred CCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC Q ss_conf 54202333455296048753355248989998999998898899800019989999999998618999999999998527 Q gi|254781097|r 267 SGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKG 346 (369) Q Consensus 267 aG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~ 346 (369) T Consensus 80 aGa~Ti~E~~~~g~P~IliP~p~~~~~hQ~~NA~~l~~~gaa~~i~e~~~~~~~L~~~i~~l~~~~~~l~~m~~~a~~~~ 159 (167) T pfam04101 80 AGAGTIAELLALGKPAILVPRPKAAGEHQDNNALELVKAGAALVLLQKELTPEKLVEALLKLLLKPLRLYEMNKAAKGSR 159 (167) T ss_pred CCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC T ss_conf 76227999999489989970765565639999999998799899642679999999999999869999999999998448 Q ss_pred CCHHHHHH Q ss_conf 83279999 Q gi|254781097|r 347 KPQAVLML 354 (369) Q Consensus 347 ~~~aa~~i 354 (369) T Consensus 160 ~~da~~~i 167 (167) T pfam04101 160 LKDAIKRL 167 (167) T ss_pred CCCHHHCC T ss_conf 94845419 |
The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site. |
| >pfam00201 UDPGT UDP-glucoronosyl and UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.3e-17 Score=139.78 Aligned_cols=165 Identities=16% Similarity=0.182 Sum_probs=120.0 Q ss_pred CCEEEEEECCCCCCCHHHHHH-HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHC--CC Q ss_conf 814898630432221023334-454432320246606776202551677653221001111345444451444300--44 Q gi|254781097|r 185 PFHLLVFGGSQGAKVFSDIVP-KSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCKATLACFFKDIERYIVE--AN 261 (369) Q Consensus 185 ~~~ILv~GGS~Ga~~ln~~v~-~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~v~~f~~~m~~~~~~--aD 261 (369) T Consensus 276 ~gvIy~S~GS~~-~~~p~~~~~~l~~af~~l--p-~~vlWk~~~~~-------~~~l~~Nv~i~~W~PQ~-dILaHp~vk 343 (501) T pfam00201 276 HGVVVFSLGSMV-SNIPEEKANEIASALAQI--P-QKVLWRFDGTK-------PSTLGRNTRLVKWLPQN-DLLGHPKTR 343 (501) T ss_pred CCEEEEECHHHH-HHCCHHHHHHHHHHHHHC--C-CEEEEEECCCC-------CCCCCCCEEECCCCCHH-HHHCCCCCE T ss_conf 787999720655-418999999999999858--9-84999847998-------77787544421668826-676198711 Q ss_pred EEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHH Q ss_conf 89972542023334552960487533552489899989999988988998000199899999999986189999999999 Q gi|254781097|r 262 LLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQ 341 (369) Q Consensus 262 lvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~ 341 (369) T Consensus 344 lFITHgG~~S~~Eai~~GVP~v~iP~f----~DQ~~Na~~~~~~G~g~~l~~~~lt~~~l~~ai~~vl~n~~Y~~na~~~ 419 (501) T pfam00201 344 AFVTHAGSNGVYEAICHGVPMVGMPLF----GDQMDNAKHMEAKGAAVTLNVLTMTSEDLLNALKTVINDPSYKENIMRL 419 (501) T ss_pred EEEECCCHHHHHHHHHCCCCEEEECCC----CCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHH T ss_conf 899658730699999859898971563----4469999999977978996321199999999999997098899999999 Q ss_pred HHHCC-CC-HHHHHHHHHHHHHHHHH Q ss_conf 98527-83-27999999999999855 Q gi|254781097|r 342 VSMKG-KP-QAVLMLSDLVEKLAHVK 365 (369) Q Consensus 342 ~~~~~-~~-~aa~~i~~~i~~la~~k 365 (369) T Consensus 420 s~~~~d~P~~p~~~av~w~E~v~r~~ 445 (501) T pfam00201 420 SSIHHDQPVKPLDRAVFWIEFVMRHK 445 (501) T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHCC T ss_conf 99986599998999999999998359 |
|
| >pfam00534 Glycos_transf_1 Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.1e-09 Score=87.29 Aligned_cols=160 Identities=16% Similarity=0.183 Sum_probs=107.7 Q ss_pred HHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH--CCCCCCCCCCCC- Q ss_conf 34433114478148986304322210233344544323202466067762025516776532210--011113454444- Q gi|254781097|r 175 IPYQSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDE--LGCKATLACFFK- 251 (369) Q Consensus 175 ~~~~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~--~~~~~~v~~f~~- 251 (369) T Consensus 4 ~~r~~~~i~~~~~vi~~~G~~~~~Kg~~~~i~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 83 (172) T pfam00534 4 EERKKLGIPEDKPIILFVGRLVPEKGLDLLLEAFALLKEQLHPNLKLVIVGDGEEEKKLKKLALKLGLEDNVIFVGFVPR 83 (172) T ss_pred HHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCH T ss_conf 99998799999959999654855449899999899888740898599998378326789999998399986899578898 Q ss_pred -CCHHHHHCCCEEEEC----CCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHH Q ss_conf -514443004489972----542023334552960487533552489899989999988988998000199899999999 Q gi|254781097|r 252 -DIERYIVEANLLICR----SGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELC 326 (369) Q Consensus 252 -~m~~~~~~aDlvIsr----aG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~ 326 (369) T Consensus 84 ~~~~~~l~~sdi~i~ps~~E~~~~~~~Eam~~G~pvI~s~~~~--------~~eii~~~~~G~~~~~~--~~~~l~~~i~ 153 (172) T pfam00534 84 EDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIASDVGG--------PAEIVKDGETGLLVDPG--DAEALAEAIE 153 (172) T ss_pred HHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHCCCEEEEECCCC--------HHHHHHCCCEEEEECCC--CHHHHHHHHH T ss_conf 9999999972410477366515711899996797199956997--------29997189839997899--9999999999 Q ss_pred HHHCCHHHHHHHHHHHHH Q ss_conf 986189999999999985 Q gi|254781097|r 327 SAMKKPSCLVQMAKQVSM 344 (369) Q Consensus 327 ~ll~d~~~l~~m~~~~~~ 344 (369) T Consensus 154 ~li~n~~~~~~m~~n~~~ 171 (172) T pfam00534 154 KLLKDEELRERLGENARK 171 (172) T ss_pred HHHCCHHHHHHHHHHHCC T ss_conf 998799999999998448 |
Mutations in this domain of subunit A of phosphatidylinositol N-acetylglucosaminyltransferase lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.04 E-value=9.8e-09 Score=80.58 Aligned_cols=161 Identities=16% Similarity=0.210 Sum_probs=105.1 Q ss_pred CCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHC--CCCCCCCCCCCCCHHHHHCC Q ss_conf 78148986304322-2102333445443232024660677620255167765322100--11113454444514443004 Q gi|254781097|r 184 QPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDEL--GCKATLACFFKDIERYIVEA 260 (369) Q Consensus 184 ~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~--~~~~~v~~f~~~m~~~~~~a 260 (369) T Consensus 203 ~~~~ii~vg-RL~~eK~~d~-LI~A~~~v~~~-~P~~~L~I~G~G~~~~~L~~~i~~l~l~~~V~f~G~~~~~~~~y~~a 279 (372) T cd04949 203 KPHKIITVA-RLAPEKQLDQ-LIKAFAKVVKQ-VPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKA 279 (372) T ss_pred CCCEEEEEE-CCCCCCCHHH-HHHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHC T ss_conf 989799996-7774028599-99999999987-89929999973477899999999829998799889988989999757 Q ss_pred CEEEECC----CCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHH Q ss_conf 4899725----420233345529604875335524898999899999889889980001998999999999861899999 Q gi|254781097|r 261 NLLICRS----GALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLV 336 (369) Q Consensus 261 DlvIsra----G~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~ 336 (369) T Consensus 280 ~~~v~~S~~EGfgl~llEAma~GlPvIa~d~~yG-------~~eiI~~g~nG~Lv~~~--d~~~la~~i~~ll~~~~~~~ 350 (372) T cd04949 280 QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYG-------PSEIIEDGENGYLVPKG--DIEALAEAIIELLNDPKLLQ 350 (372) T ss_pred CEEEECCCCCCCCCHHHHHHHCCCCEEEECCCCC-------CHHHHCCCCCEEEECCC--CHHHHHHHHHHHHCCHHHHH T ss_conf 9999802003676589999985999998059999-------68884589847996899--99999999999986999999 Q ss_pred HHHHHHHHCCCCHHHHHHHH Q ss_conf 99999985278327999999 Q gi|254781097|r 337 QMAKQVSMKGKPQAVLMLSD 356 (369) Q Consensus 337 ~m~~~~~~~~~~~aa~~i~~ 356 (369) T Consensus 351 ~~s~~a~~~a~~fs~~~i~~ 370 (372) T cd04949 351 KFSEAAYENAERYSEENVWE 370 (372) T ss_pred HHHHHHHHHHHHCCHHHHHH T ss_conf 99999999999559899994 |
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.5e-07 Score=70.69 Aligned_cols=152 Identities=11% Similarity=0.194 Sum_probs=97.2 Q ss_pred CCCCEEEEEECCCC-CCCHHHHHHHHHHHHHHHCC-CCCEEEEEECCCCHHHHHHHHHHCCC--CCCCCCCCC--CCHHH Q ss_conf 47814898630432-22102333445443232024-66067762025516776532210011--113454444--51444 Q gi|254781097|r 183 DQPFHLLVFGGSQG-AKVFSDIVPKSIALIPEMQR-KRLVIMQQVREDDKEKVQKQYDELGC--KATLACFFK--DIERY 256 (369) Q Consensus 183 ~~~~~ILv~GGS~G-a~~ln~~v~~~~~~l~~~~~-~~~~v~~~~g~~~~~~~~~~~~~~~~--~~~v~~f~~--~m~~~ 256 (369) T Consensus 228 ~~~~~i~sv-grlv~~Kg~~-~li~A~~~l~~~~~~~~~~~~iiG~G~~~~~l~~~~~~l~l~~~v~f~G~~~~~~v~~~ 305 (407) T cd04946 228 DDTLRIVSC-SYLVPVKRVD-LIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKL 305 (407) T ss_pred CCCEEEEEE-ECCCHHCCHH-HHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH T ss_conf 896599996-1773003889-99999999986589938999998268128999999997799887999278996999999 Q ss_pred HH--CCCEEEEC---CC-CHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHC Q ss_conf 30--04489972---54-20233345529604875335524898999899999889889980001998999999999861 Q gi|254781097|r 257 IV--EANLLICR---SG-ALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMK 330 (369) Q Consensus 257 ~~--~aDlvIsr---aG-~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~ 330 (369) T Consensus 306 ~~~~~~d~~~~~s~~eg~p~~~~Eama~g~pvi~t~~----~g----~~e~v~~~~~g~l~~~~~-~~~~la~~i~~l~~ 376 (407) T cd04946 306 YKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNV----GG----TPEIVDNGGNGLLLSKDP-TPNELVSSLSKFID 376 (407) T ss_pred HHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCC----CC----CHHHEECCCCEEEECCCC-CHHHHHHHHHHHHH T ss_conf 9856961999566334641799999974999998479----99----841230698279968999-99999999999980 Q ss_pred CHHHHHHHHHHHHHC Q ss_conf 899999999999852 Q gi|254781097|r 331 KPSCLVQMAKQVSMK 345 (369) Q Consensus 331 d~~~l~~m~~~~~~~ 345 (369) T Consensus 377 ~~~~~~~~~~~ar~~ 391 (407) T cd04946 377 NEEEYQTMREKAREK 391 (407) T ss_pred CHHHHHHHHHHHHHH T ss_conf 999999999999999 |
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.87 E-value=2e-06 Score=64.41 Aligned_cols=146 Identities=10% Similarity=0.105 Sum_probs=83.7 Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCHH-HHHHHHHHCCCCCCC-CCCCCCCH-HHHHCCCEEEEC----CCCHHHHHH Q ss_conf 33445443232024660677620255167-765322100111134-54444514-443004489972----542023334 Q gi|254781097|r 203 IVPKSIALIPEMQRKRLVIMQQVREDDKE-KVQKQYDELGCKATL-ACFFKDIE-RYIVEANLLICR----SGALTVSEI 275 (369) Q Consensus 203 ~v~~~~~~l~~~~~~~~~v~~~~g~~~~~-~~~~~~~~~~~~~~v-~~f~~~m~-~~~~~aDlvIsr----aG~~Ti~E~ 275 (369) T Consensus 313 ll~~a~~~~~~~-~~~~v-i~G~G~~~~e~~~~~l~~~~~~~~~~~~~~~e~l~~~lya~aD~~l~PS~~EP~Gl~qleA 390 (476) T cd03791 313 LLLEALPELLEL-GGQLV-ILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYA 390 (476) T ss_pred HHHHHHHHHHHC-CCEEE-EEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCEEECCCCCCCCCHHHHHH T ss_conf 999999999963-98899-9946977899999999976899599998068788999998499974255457854899999 Q ss_pred HHHCCCEEEEECCCCCCCHHH--HHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHH---CCHHHHHHHHHHHHHC--CCC Q ss_conf 552960487533552489899--989999988988998000199899999999986---1899999999999852--783 Q gi|254781097|r 276 AVIGRPAILVPYPHSVDQDQL--HNAYYLQEGGGAKVITENFLSPERLAEELCSAM---KKPSCLVQMAKQVSMK--GKP 348 (369) Q Consensus 276 ~~~g~P~IlIP~p~a~~~hQ~--~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll---~d~~~l~~m~~~~~~~--~~~ 348 (369) T Consensus 391 m~~GtppIa~----~tGGL~dtV~d~~~~~~~~tGf~f~~~--~~~~l~~ai~~al~~~~~~~~~~~l~~~am~~~fsW~ 464 (476) T cd03791 391 MRYGTVPIVR----ATGGLADTVIDYNEDTGEGTGFVFEGY--NADALLAALRRALALYRDPEAWRKLQRNAMAQDFSWD 464 (476) T ss_pred HHCCCCEEEC----CCCCCCCEEECCCCCCCCCCEEEECCC--CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH T ss_conf 8669975980----699986510036667777745886799--9999999999999985799999999998864289929 Q ss_pred HHHHHHHH Q ss_conf 27999999 Q gi|254781097|r 349 QAVLMLSD 356 (369) Q Consensus 349 ~aa~~i~~ 356 (369) T Consensus 465 ~~A~~y~~ 472 (476) T cd03791 465 RSAKEYLE 472 (476) T ss_pred HHHHHHHH T ss_conf 99999999 |
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=4e-06 Score=62.30 Aligned_cols=152 Identities=14% Similarity=0.137 Sum_probs=87.4 Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCHH-HHHHHHHHCCCCCCC-CCCCCCCH-HHHHCCCEEEEC----CCCHHHHH Q ss_conf 333445443232024660677620255167-765322100111134-54444514-443004489972----54202333 Q gi|254781097|r 202 DIVPKSIALIPEMQRKRLVIMQQVREDDKE-KVQKQYDELGCKATL-ACFFKDIE-RYIVEANLLICR----SGALTVSE 274 (369) Q Consensus 202 ~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~-~~~~~~~~~~~~~~v-~~f~~~m~-~~~~~aDlvIsr----aG~~Ti~E 274 (369) T Consensus 309 ~ll~~a~~~~~~~-~~~~vi-~G~G~~~~~~~l~~l~~~~~~~~~~~~gf~e~l~~~iya~aD~~lmPS~~EP~Gl~qle 386 (476) T PRK00654 309 DLVLEALDEILEQ-GGQLVL-LGTGDPELEEAFRALAARYPGRVGVQIGYDEALAHRIYAGADFFLMPSRFEPCGLTQLY 386 (476) T ss_pred HHHHHHHHHHHHC-CCEEEE-EECCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCEEECCCCCCCCCHHHHH T ss_conf 9999999999970-998999-94597899999999998779888999578868989998728878645611367768999 Q ss_pred HHHHCCCEEEEECCCCCCCH--HHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHH---HHHCCHHHHHHHHHHHHHC--CC Q ss_conf 45529604875335524898--99989999988988998000199899999999---9861899999999999852--78 Q gi|254781097|r 275 IAVIGRPAILVPYPHSVDQD--QLHNAYYLQEGGGAKVITENFLSPERLAEELC---SAMKKPSCLVQMAKQVSMK--GK 347 (369) Q Consensus 275 ~~~~g~P~IlIP~p~a~~~h--Q~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~---~ll~d~~~l~~m~~~~~~~--~~ 347 (369) T Consensus 387 Am~~Gt~Pvv~----~tGGL~dtV~d~~~~~~~~tGf~f~~~--~~~~l~~ai~~al~~~~~~~~~~~l~~~~m~~~fsW 460 (476) T PRK00654 387 ALRYGTLPIVR----RTGGLADTVIDYDPEDGGATGFVFDDF--NAEDLLTALRRALELYRQPDLWRALQRQAMAQDFSW 460 (476) T ss_pred HHHCCCCCEEE----CCCCCCCCCCCCCCCCCCCCEEEECCC--CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC T ss_conf 98769985881----799975514566667787634873799--999999999999988569999999999985237995 Q ss_pred CHHHHHHHHHHHHH Q ss_conf 32799999999999 Q gi|254781097|r 348 PQAVLMLSDLVEKL 361 (369) Q Consensus 348 ~~aa~~i~~~i~~l 361 (369) T Consensus 461 ~~~A~~y~~lY~~l 474 (476) T PRK00654 461 DKSAEEYLELYRRL 474 (476) T ss_pred HHHHHHHHHHHHHH T ss_conf 99999999999997 |
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type; InterPro: IPR011835 This family consists of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.071 Score=32.61 Aligned_cols=166 Identities=14% Similarity=0.148 Sum_probs=101.1 Q ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHHHCC-CCCEEEEEECCCC-HHHHHHHH--HHCCCCCCC-CCCCCCCHH-HHHC Q ss_conf 1489863043222102333445443232024-6606776202551-67765322--100111134-544445144-4300 Q gi|254781097|r 186 FHLLVFGGSQGAKVFSDIVPKSIALIPEMQR-KRLVIMQQVREDD-KEKVQKQY--DELGCKATL-ACFFKDIER-YIVE 259 (369) Q Consensus 186 ~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~-~~~~v~~~~g~~~-~~~~~~~~--~~~~~~~~v-~~f~~~m~~-~~~~ 259 (369) T Consensus 326 ~Pl~~~isRL~~QKG~Dl~~~a~~~ll~~~~~~Qlv~-lG~Gdp~le~~l~~la~~~~~p~~~~~~~~yde~LAh~iyAg 404 (517) T TIGR02095 326 VPLFGVISRLVEQKGVDLLLAALPELLELGDFGQLVV-LGTGDPELEEALRELADHERYPGKVRVIIGYDEALAHRIYAG 404 (517) T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEE-EECCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHC T ss_conf 5379998225624427899999999971179668999-704887999999999999637894899962587999989723 Q ss_pred CCEEEE--C--CCCHHHHHHHHHCCCEEEEECCCCCCC----HHHHHHHHHH---HCCCEEEEEHHCCCHHHHHHHHHHH Q ss_conf 448997--2--542023334552960487533552489----8999899999---8898899800019989999999998 Q gi|254781097|r 260 ANLLIC--R--SGALTVSEIAVIGRPAILVPYPHSVDQ----DQLHNAYYLQ---EGGGAKVITENFLSPERLAEELCSA 328 (369) Q Consensus 260 aDlvIs--r--aG~~Ti~E~~~~g~P~IlIP~p~a~~~----hQ~~NA~~l~---~~G~a~~i~~~~~~~~~l~~~i~~l 328 (369) T Consensus 405 aD~~lmPSrFEPCGL~Ql~amRYGt~PiV----r~tGGL~DTV~d~~~~~~~aP~~~~tGF~F~~~--~~~~L~~a~~rA 478 (517) T TIGR02095 405 ADFFLMPSRFEPCGLTQLYAMRYGTVPIV----RRTGGLADTVVDADPENLAAPAGSGTGFLFEEY--DPEALLAALSRA 478 (517) T ss_pred CCEEECCCCCCCCHHHHHHHHHCCCCEEE----ECCCCCCEEEECCCCCCCCCCCCCCCCEEECCC--CHHHHHHHHHHH T ss_conf 77688078557312579989734995387----158895201003877644477877654172368--889999999999 Q ss_pred H---C-CHHHHHHHHHHHHH--CCCCHHHHHHHHHH Q ss_conf 6---1-89999999999985--27832799999999 Q gi|254781097|r 329 M---K-KPSCLVQMAKQVSM--KGKPQAVLMLSDLV 358 (369) Q Consensus 329 l---~-d~~~l~~m~~~~~~--~~~~~aa~~i~~~i 358 (369) T Consensus 479 l~lY~~~~~~w~~l~~~aM~~DfSW~~sA~~Y~~lY 514 (517) T TIGR02095 479 LRLYRQDPELWKALQKNAMSQDFSWDKSAKQYVELY 514 (517) T ss_pred HHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH T ss_conf 998723978999999985136876105799999999 |
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; GO: 0009011 starch synthase activity, 0009250 glucan biosynthetic process. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.49 Score=26.74 Aligned_cols=152 Identities=14% Similarity=0.093 Sum_probs=78.6 Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEE--EECCCCHH--HHHHHH Q ss_conf 33344544323202466067762025516776532210011113454444514443004489--97254202--333455 Q gi|254781097|r 202 DIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCKATLACFFKDIERYIVEANLL--ICRSGALT--VSEIAV 277 (369) Q Consensus 202 ~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlv--IsraG~~T--i~E~~~ 277 (369) T Consensus 160 Di~~~v~~elqke~~d~Y~Lvkss---n~~d~R--l~~l~gvk~plp-~dd~~~lf~~~Di~f~p~RGGaFEi~~iEAl~ 233 (333) T PHA01630 160 DIVVKIFHELQNEGYDFYFLIKSS---NMLDPR--LFGLNGVKTPLP-DDDIYSLFAGCDILFYPVRGGAFEIPVIEALA 233 (333) T ss_pred HHHHHHHHHHHHCCCCEEEEEEEC---CCCCCE--EECCCCCCCCCC-CHHHHHHHHHCCEEEEECCCCEEECCHHHHHH T ss_conf 889999999984578569999841---556730--212335447898-16789987406379984158603431799987 Q ss_pred HCCCEEEEECCCCCC-----CHHHHHHHHHHHCCCEEEEEHH---------CCCHHHHHHHHHHHHCC---HHHHHHHHH Q ss_conf 296048753355248-----9899989999988988998000---------19989999999998618---999999999 Q gi|254781097|r 278 IGRPAILVPYPHSVD-----QDQLHNAYYLQEGGGAKVITEN---------FLSPERLAEELCSAMKK---PSCLVQMAK 340 (369) Q Consensus 278 ~g~P~IlIP~p~a~~-----~hQ~~NA~~l~~~G~a~~i~~~---------~~~~~~l~~~i~~ll~d---~~~l~~m~~ 340 (369) T Consensus 234 ~gl~~v~-te~GaWsE~~~~~~~----~~~ik~~~~~k~~~~NpiHvG~~le~~~eda~qKll~~L~n~~~ek~Ke~le~ 308 (333) T PHA01630 234 LGLDVVV-TEKGAWSEWVLSNLD----VYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEG 308 (333) T ss_pred CCCCEEE-CCCCCHHHHCCCCCH----HHHHHHCCCCEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH T ss_conf 0797676-278640652475210----02212068724426797322266678768999999999862583777765553 Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHH Q ss_conf 998527832799999999999985 Q gi|254781097|r 341 QVSMKGKPQAVLMLSDLVEKLAHV 364 (369) Q Consensus 341 ~~~~~~~~~aa~~i~~~i~~la~~ 364 (369) T Consensus 309 ~~~~~rEnYsy~ai~k~~~kIlek 332 (333) T PHA01630 309 RAILYRENYSYNAIAKMWEKILEK 332 (333) T ss_pred HHHHHHHHCCHHHHHHHHHHHHHC T ss_conf 121124534789999999999850 |
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.67 Score=25.79 Aligned_cols=162 Identities=16% Similarity=0.166 Sum_probs=90.9 Q ss_pred CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC--CCCH---HHHHHHHHHC-C-CCCCCC-CC--CC Q ss_conf 447814898630432221023334454432320246606776202--5516---7765322100-1-111345-44--44 Q gi|254781097|r 182 LDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVR--EDDK---EKVQKQYDEL-G-CKATLA-CF--FK 251 (369) Q Consensus 182 ~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g--~~~~---~~~~~~~~~~-~-~~~~v~-~f--~~ 251 (369) T Consensus 180 ~~~~~tIlv-GNS-g-D~sN~-Hie~L~~l~~~~~~~v~i~~Pl~Ypagn~~Yi~~V~~~g~~lFg~~~~~~L~e~l~f~ 255 (358) T PRK02797 180 RAGKMTILV-GNS-G-DPSNR-HIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGEENLQILTEKLPFD 255 (358) T ss_pred CCCCEEEEE-ECC-C-CCCCC-HHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHCCHH T ss_conf 788559997-078-9-85400-8999999999736886999977757765999999999999865866677644218989 Q ss_pred CCHHHHHCCCEEEE----CCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHH Q ss_conf 51444300448997----25420233345529604875335524898999899999889889980001998999999999 Q gi|254781097|r 252 DIERYIVEANLLIC----RSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCS 327 (369) Q Consensus 252 ~m~~~~~~aDlvIs----raG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ 327 (369) T Consensus 256 ~Yl~lL~~~Dl~~F~~~RQQgiGnl~lLi~lG~~~~l~-----r~n~fw---qdl~eq~vpVlf~~d~L~~~~i~e~qrq 327 (358) T PRK02797 256 DYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLN-----RDNPFW---QDMTEQGLPVLFTGDDLDEDLVREAQRQ 327 (358) T ss_pred HHHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCCEEEEE-----CCCCHH---HHHHHCCCCEEECCCCCCHHHHHHHHHH T ss_conf 99999973897344312466660899999779808995-----689478---8998669828953887888999999999 Q ss_pred HHC-CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH Q ss_conf 861-899999999999852783279999999999998 Q gi|254781097|r 328 AMK-KPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLAH 363 (369) Q Consensus 328 ll~-d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~la~ 363 (369) T Consensus 328 La~~dk~~-------I-~Ff~pny~~~W~~~l~~~~g 356 (358) T PRK02797 328 LASVDKNI-------I-AFFSPNYLQGWRNALAIAAG 356 (358) T ss_pred HHHCCHHH-------E-EEECCCHHHHHHHHHHHHCC T ss_conf 98517432-------4-21187637999999988626 |
|
| >TIGR02918 TIGR02918 conserved hypothetical protein TIGR02918; InterPro: IPR014267 Members of this entry are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.16 Score=30.13 Aligned_cols=146 Identities=19% Similarity=0.189 Sum_probs=93.6 Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCC--CCCCCCCCCCCCHHHHHCCCEEEECC---C-CHHHHHH Q ss_conf 3334454432320246606776202551677653221001--11134544445144430044899725---4-2023334 Q gi|254781097|r 202 DIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELG--CKATLACFFKDIERYIVEANLLICRS---G-ALTVSEI 275 (369) Q Consensus 202 ~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~--~~~~v~~f~~~m~~~~~~aDlvIsra---G-~~Ti~E~ 275 (369) T Consensus 349 ~AVv~Ak~~~P~l~---FDIYG~GgE~--~~L~~iI~~n~A~DYI~LkGH-~~L~~vY~~YelyLsaStSEGFGLTLmEA 422 (511) T TIGR02918 349 KAVVKAKKSVPELT---FDIYGEGGEK--SKLKKIINENQAEDYIRLKGH-KNLSEVYKDYELYLSASTSEGFGLTLMEA 422 (511) T ss_pred HHHHHHCCCCCCEE---EEECCCCHHH--HHHHHHHHHHCCCCHHHHCCC-CCHHHHHCCCCEEEEECCCCCCHHHHHHH T ss_conf 99999513388511---0003563788--999998763120012431154-33566623232234521214411579999 Q ss_pred HHHCCCEEE--EECCCCCCCHHHHHHHHHHHCCCEEEEE-HHCCC-H----HHHHHHHHHHHCCHHHHHHHHHHHHHCCC Q ss_conf 552960487--5335524898999899999889889980-00199-8----99999999986189999999999985278 Q gi|254781097|r 276 AVIGRPAIL--VPYPHSVDQDQLHNAYYLQEGGGAKVIT-ENFLS-P----ERLAEELCSAMKKPSCLVQMAKQVSMKGK 347 (369) Q Consensus 276 ~~~g~P~Il--IP~p~a~~~hQ~~NA~~l~~~G~a~~i~-~~~~~-~----~~l~~~i~~ll~d~~~l~~m~~~~~~~~~ 347 (369) T Consensus 423 vGSGLgmIGFDV~Y---------GN~TFI~d~~NGYLIP~~~~~~~~~~I~~~lA~~Iv~~Fv~~~~~~~~~~~SY~IA~ 493 (511) T TIGR02918 423 VGSGLGMIGFDVNY---------GNPTFIKDNKNGYLIPIDEEEDDEDEIITALAEKIVEYFVNENDIDAFHEVSYQIAE 493 (511) T ss_pred HHCCCCCCCCCCCC---------CCCCEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH T ss_conf 75043323661874---------388702408884043345787887899999999989861267860026563178886 Q ss_pred CHHHHHHHHHHHHHH Q ss_conf 327999999999999 Q gi|254781097|r 348 PQAVLMLSDLVEKLA 362 (369) Q Consensus 348 ~~aa~~i~~~i~~la 362 (369) T Consensus 494 ~Flt~~i~~kW~~Lv 508 (511) T TIGR02918 494 GFLTEEIVEKWKKLV 508 (511) T ss_pred HHHHHHHHHHHHHHH T ss_conf 631489999999985 |
. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=90.97 E-value=1.3 Score=23.84 Aligned_cols=148 Identities=14% Similarity=0.175 Sum_probs=79.3 Q ss_pred CCCCCCEEEEEECCCCCCCHH-HHHHHHHHHHHHHCCCCCEEEEEECCCC---HHHHHHHHHHCCCCCCCCCC-----CC Q ss_conf 144781489863043222102-3334454432320246606776202551---67765322100111134544-----44 Q gi|254781097|r 181 DLDQPFHLLVFGGSQGAKVFS-DIVPKSIALIPEMQRKRLVIMQQVREDD---KEKVQKQYDELGCKATLACF-----FK 251 (369) Q Consensus 181 ~~~~~~~ILv~GGS~Ga~~ln-~~v~~~~~~l~~~~~~~~~v~~~~g~~~---~~~~~~~~~~~~~~~~v~~f-----~~ 251 (369) T Consensus 425 glp~~avVf~c~--~n~~K~~pev~~~wmqIL~~vP~--Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~ 500 (620) T COG3914 425 GLPEDAVVFCCF--NNYFKITPEVFALWMQILSAVPN--SVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNE 500 (620) T ss_pred CCCCCEEEEEEC--CCCCCCCHHHHHHHHHHHHHCCC--CEEEEECCCCCHHHHHHHHHHHHHCCCCHHHEEECCCCCCH T ss_conf 999980899966--88644787999999999984898--57998268986889999999999708981334626999988 Q ss_pred CCHHHHHCCCEEEEC---CCCHHHHHHHHHCCCEEEEECCCCCCCHHHH--H-HHHHHHCCCEEEEEHHCCCHHHHHHHH Q ss_conf 514443004489972---5420233345529604875335524898999--8-999998898899800019989999999 Q gi|254781097|r 252 DIERYIVEANLLICR---SGALTVSEIAVIGRPAILVPYPHSVDQDQLH--N-AYYLQEGGGAKVITENFLSPERLAEEL 325 (369) Q Consensus 252 ~m~~~~~~aDlvIsr---aG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~--N-A~~l~~~G~a~~i~~~~~~~~~l~~~i 325 (369) T Consensus 501 ~h~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~------G~~FasR~~~si~~~agi~e~vA~---s~~dYV~~a 571 (620) T COG3914 501 DHRARYGIADLVLDTYPYGGHTTASDALWMGVPVLTRV------GEQFASRNGASIATNAGIPELVAD---SRADYVEKA 571 (620) T ss_pred HHHHHHCHHHEEEECCCCCCCCCHHHHHHHCCCEEEEC------CHHHHHHHHHHHHHHCCCCHHHCC---CHHHHHHHH T ss_conf 99986231324652466788642677787358446511------177887605999986698024218---888999999 Q ss_pred HHHHCCHHHHHHHHHH Q ss_conf 9986189999999999 Q gi|254781097|r 326 CSAMKKPSCLVQMAKQ 341 (369) Q Consensus 326 ~~ll~d~~~l~~m~~~ 341 (369) T Consensus 572 v~~g~dral~q~~r~~ 587 (620) T COG3914 572 VAFGSDRALRQQVRAE 587 (620) T ss_pred HHHCCCHHHHHHHHHH T ss_conf 9853417778755799 |
|
| >pfam07429 Fuc4NAc_transf 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) | Back alignment and domain information |
|---|
Probab=90.64 E-value=1.4 Score=23.64 Aligned_cols=139 Identities=17% Similarity=0.137 Sum_probs=80.0 Q ss_pred HCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE--EECCCCH---HHHHHHHHHC-C-CCCCCCC-C-- Q ss_conf 11447814898630432221023334454432320246606776--2025516---7765322100-1-1113454-4-- Q gi|254781097|r 180 SDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQ--QVREDDK---EKVQKQYDEL-G-CKATLAC-F-- 249 (369) Q Consensus 180 ~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~--~~g~~~~---~~~~~~~~~~-~-~~~~v~~-f-- 249 (369) T Consensus 180 ~~~~~~ltIlv-GNS-g-D~sN~-HieaL~~i~~~fg~~vkiivPmgYPannq~Yi~~V~~~g~~lF~~~~~~iL~e~m~ 255 (361) T pfam07429 180 KPRAGKLTILV-GNS-G-DRSNR-HIAALKAIHQQFGDNVRIIVPMGYPANNQAYIEQVRQAGLALFPAENLQILTEKLA 255 (361) T ss_pred CCCCCCEEEEE-ECC-C-CCCHH-HHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCC T ss_conf 77889538997-378-8-84404-99999999997379848999788678769999999999997648421116653189 Q ss_pred CCCCHHHHHCCCEEEE----CCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHH Q ss_conf 4451444300448997----254202333455296048753355248989998999998898899800019989999999 Q gi|254781097|r 250 FKDIERYIVEANLLIC----RSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEEL 325 (369) Q Consensus 250 ~~~m~~~~~~aDlvIs----raG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i 325 (369) T Consensus 256 Fd~YL~lL~~cDlgyF~f~RQQgiGtlclLiq~GiP~vls-----r~Np---FwqDl~eq~vPvlf~~d~L~~~~v~eaq 327 (361) T pfam07429 256 FDDYLALLRQCDLGYFIFNRQQGIGTLCLLIQAGVPCVLS-----RENP---FWQDMQEQQVPVLFTGDDLDEALIREAQ 327 (361) T ss_pred HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCEEEE-----CCCC---HHHHHHHCCCCEEECCCCCCHHHHHHHH T ss_conf 9999999974887788530023460999998479938993-----7995---5664887289777546645679999999 Q ss_pred HHHHC Q ss_conf 99861 Q gi|254781097|r 326 CSAMK 330 (369) Q Consensus 326 ~~ll~ 330 (369) T Consensus 328 rQl~~ 332 (361) T pfam07429 328 RQLAS 332 (361) T ss_pred HHHHH T ss_conf 99973 |
This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (EC 2.4.1.-) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc. |
| >pfam03033 Glyco_transf_28 Glycosyltransferase family 28 N-terminal domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-31 Score=237.22 Aligned_cols=135 Identities=36% Similarity=0.574 Sum_probs=120.3 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHH Q ss_conf 99987885256207999999999659839999572376762444687516875256565331233211100012110135 Q gi|254781097|r 7 ILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASL 86 (369) Q Consensus 7 ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 86 (369) T Consensus 1 Ilia~GGTGGHv~Palala~~L~~~g~~v~igt~~~~e~~v~~-~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 78 (136) T pfam03033 1 VLLAGGGTRGHVFPAVALAWALRRRGHEVRLGTPPGLEEFVEE-AGLPFVPIGGDGLRR-KSLKNLKEPLEGGRALRQAK 78 (136) T ss_pred CEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHH-CCCEEEEECCCCCCC-CHHHHHHHHHHHHHHHHHHH T ss_conf 9899441579999999999999985997712158028888753-598189962798546-75999999999999999999 Q ss_pred HHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHH Q ss_conf 554203444243126532102478886234110122153200156778899999874 Q gi|254781097|r 87 RLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVIMGKANRLLSWGVQIIA 143 (369) Q Consensus 87 ~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~v~G~~nk~l~~~a~~v~ 143 (369) T Consensus 79 ~~l~~~kp~~vig~GGy~s~p~~~aa~~~~ip~~ihEqN~vpG~anr~l~~~a~~V~ 135 (136) T pfam03033 79 EILKEFKPDLVIGFGGYVAVPALIAAPLAGIPLIVHEQNGIPGLVNKLLPWRADKVL 135 (136) T ss_pred HHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCEEE T ss_conf 999856998897438854228999999839988998798624999998887389810 |
The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. |
| >pfam08660 Alg14 Oligosaccharide biosynthesis protein Alg14 like | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.8e-16 Score=134.61 Aligned_cols=152 Identities=21% Similarity=0.226 Sum_probs=113.0 Q ss_pred EEECCCCHHHHHHHHHHHHHHHHCCCE-EEEEECHH--HHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHH Q ss_conf 998788525620799999999965983-99995723--767624446875168752565653312332111000121101 Q gi|254781097|r 8 LLVAGGTGGHVFPAVALSHELKNRGYA-VYLITDRR--ARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIA 84 (369) Q Consensus 8 li~~gGTGGHi~palala~~L~~~g~~-v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (369) T Consensus 2 ~vv~-GSGGHt~eml~L~~~l~~~~~~~~yvv~~~D~~s~~~~~~~~-~~~~~i~~~~r~R~v~qs~~~s~~~~~~~~~~ 79 (166) T pfam08660 2 CVVL-GSGGHTAEMLRLLPFLKNLEDPRRYVVTETDKDSLSKASKFE-KSRGGILKIPRAREVGQSYLRSIFTTLRNLLS 79 (166) T ss_pred EEEE-ECHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCC-CCCCEEEECCCEEECCCHHHHHHHHHHHHHHH T ss_conf 9999-482789999999998775689738999889807899988605-55523764463157385567459999999999 Q ss_pred HHHHHHHCCCCEEEECCCCCCHHHHHHHHHCC------CCCEEECC---CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 35554203444243126532102478886234------11012215---3200156778899999874134322223556 Q gi|254781097|r 85 SLRLIKKLKPNVVVGFGGYHSISPLLAGMILR------IPSMVHEQ---NVIMGKANRLLSWGVQIIARGLVSSQKKVLL 155 (369) Q Consensus 85 ~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~------iP~vihEq---N~v~G~~nk~l~~~a~~v~~~~~~~~~~~~~ 155 (369) T Consensus 80 s~~il~k~kPdvii~tG~g~~vp~~~~a~ll~~~~~~~~k~i~iES~~r~~~~sltgkll~~~ad~f~vqW~~l~~~yp- 158 (166) T pfam08660 80 ALKLLRRERPDVILCNGPGTCVPFCLAAKLLKILGLKGTKIVYIESFARVKTLSLSGKLLYPLADRFIVQWPELKKKYP- 158 (166) T ss_pred HHHHHHHHCCCEEEECCCCEEEHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHCCEEEEECHHHHHHCC- T ss_conf 9999985399899977996030999999999864015885899984421378647777699868988983799994689- Q ss_pred CCCEEEEC Q ss_conf 67325304 Q gi|254781097|r 156 RKIIVTGN 163 (369) Q Consensus 156 ~k~~~~G~ 163 (369) T Consensus 159 -~a~y~G~ 165 (166) T pfam08660 159 -KAIYYGR 165 (166) T ss_pred -CCEEEEC T ss_conf -9779703 |
Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane. |
| >KOG3339 consensus | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0001 Score=52.44 Aligned_cols=152 Identities=18% Similarity=0.221 Sum_probs=91.2 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEE-E--CHHHHH----HHCCCCC--CCEEEEECCCCCCCCHHHHHHHHH Q ss_conf 699987885256207999999999659839999-5--723767----6244468--751687525656533123321110 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRGYAVYLI-T--DRRARS----FITDFPA--DSIYEIVSSQVRFSNPFVFWNSLV 76 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g~~v~~~-~--~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~ 76 (369) T Consensus 40 ~~lVvlG-SGGHT~EMlrLl~~l~~~y~~r~yI~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipR---sReVgQS~ltSv~ 115 (211) T KOG3339 40 STLVVLG-SGGHTGEMLRLLEALQDLYSPRSYIAADTDEMSEQKARSFELSLAHCKAKNYEIPR---SREVGQSWLTSVF 115 (211) T ss_pred EEEEEEC-CCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHEECCH---HHHHHHHHHHHHH T ss_conf 0899986-89768999999998875318537999658354289987331133336601134550---3564234540199 Q ss_pred HCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCC-----CEEECC-CC---CCHHHHHHHHHHHHHHHCCCC Q ss_conf 001211013555420344424312653210247888623411-----012215-32---001567788999998741343 Q gi|254781097|r 77 ILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIP-----SMVHEQ-NV---IMGKANRLLSWGVQIIARGLV 147 (369) Q Consensus 77 ~~~~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP-----~vihEq-N~---v~G~~nk~l~~~a~~v~~~~~ 147 (369) T Consensus 116 Tti~all~s~~lv~RirPdlil~NGPGTCv~i~~~a~l~~iL~~~~~~IvyvES~cRV~tlSlsGkiL~~~~d~Fivqw~ 195 (211) T KOG3339 116 TTIWALLQSFVLVWRIRPDLILCNGPGTCVPICLSAYLMEILGLKSSHIVYVESICRVKTLSLSGKILYPVVDLFIVQWP 195 (211) T ss_pred HHHHHHHHHHEEEEECCCCEEEECCCCCEEHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHH T ss_conf 99999997723789558878997799817389999999998476751899986345760455575050668889987429 Q ss_pred CCCCCCCCCCCEEEEC Q ss_conf 2222355667325304 Q gi|254781097|r 148 SSQKKVLLRKIIVTGN 163 (369) Q Consensus 148 ~~~~~~~~~k~~~~G~ 163 (369) T Consensus 196 ~L~~ky~--~~~~~g~ 209 (211) T KOG3339 196 ALATKYL--RVKYFGI 209 (211) T ss_pred HHHHHCC--CCEEEEE T ss_conf 9998523--5200133 |
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.056 Score=33.35 Aligned_cols=127 Identities=13% Similarity=0.199 Sum_probs=65.1 Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHH-HHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCC Q ss_conf 998876999878852562079999999996598399995723-7676244468751687525656533123321110001 Q gi|254781097|r 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRR-ARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILW 79 (369) Q Consensus 1 M~~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 79 (369) T Consensus 1 ~~~p~tvLiTg~----r~~~aL~laR~l~~~Gh~V~~aD~~~~~l~r~Sr-~v~~~~~vP~P---~~d~~~y-------- 64 (387) T PRK06849 1 ANTPKTVLITGA----RAPAALQLARSFHNAGHTVILADSLKYPLSRFSR-AVDGFYTIPSP---KWDPNAY-------- 64 (387) T ss_pred CCCCCEEEEECC----CHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH-CEEEEEECCCC---CCCHHHH-------- T ss_conf 999877999588----6078999999998789979998489877542000-01127986999---7898999-------- Q ss_pred CCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHC-----CCCCEEECCCCCCHHHHHH-HHHHHHHHHCCCCCC Q ss_conf 211013555420344424312653210247888623-----4110122153200156778-899999874134322 Q gi|254781097|r 80 KAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMIL-----RIPSMVHEQNVIMGKANRL-LSWGVQIIARGLVSS 149 (369) Q Consensus 80 ~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l-----~iP~vihEqN~v~G~~nk~-l~~~a~~v~~~~~~~ 149 (369) T Consensus 65 --~~~Ll~Iv~~e~idl~IP~----~eev~~~a~~~~~l~~~~~~~~~d~~~l~~LhdK~~F~~~a~~lGl~vP~T 134 (387) T PRK06849 65 --IQALLSIVKRHNIDLLIPT----CEEVFYLSLAKEELSAYCHVFHFDFDLLLMLHNKFEFIQQARSLGLSAPKT 134 (387) T ss_pred --HHHHHHHHHHHCCCEEEEC----CCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCE T ss_conf --9999999998389999977----768999986576447676376589999998644899999999749999988 |
|
| >TIGR01179 galE UDP-glucose 4-epimerase; InterPro: IPR005886 Synonym: UDP-galactose 4-epimerase UDP-glucose 4-epimerase (5 | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.0099 Score=38.59 Aligned_cols=93 Identities=18% Similarity=0.302 Sum_probs=52.9 Q ss_pred EEEEECCCCH---HHHHHHHHHHHHHHHCCCEEEEEECH--HHHHHHCCCC---CCCEEEEECCCCCCCCHHHHHHHHHH Q ss_conf 6999878852---56207999999999659839999572--3767624446---87516875256565331233211100 Q gi|254781097|r 6 VILLVAGGTG---GHVFPAVALSHELKNRGYAVYLITDR--RARSFITDFP---ADSIYEIVSSQVRFSNPFVFWNSLVI 77 (369) Q Consensus 6 ~ili~~gGTG---GHi~palala~~L~~~g~~v~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~ 77 (369) T Consensus 1 ~iLVTG-GAGYIGSHt------~~~Ll~~G~ev~vlDNLs~G~~~~l~~~~~~~G~~~~fv-~gD--------------- 57 (341) T TIGR01179 1 KILVTG-GAGYIGSHT------VRQLLESGYEVVVLDNLSNGSAEALKRGEEITGKEVTFV-EGD--------------- 57 (341) T ss_pred CEEEEE-CCCCCHHHH------HHHHHHCCCEEEEEECCCCCCHHHHCCCCEECCCCCEEE-EEC--------------- T ss_conf 926861-466443588------788763597289981578884887500234148532058-717--------------- Q ss_pred CCCCCHHHHHHHH----HCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCC Q ss_conf 0121101355542----0344424312653210247888623411012215320 Q gi|254781097|r 78 LWKAFIASLRLIK----KLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVI 127 (369) Q Consensus 78 ~~~~~~~~~~ii~----~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~v 127 (369) T Consensus 58 -L~D~~~l~~~f~kqql~~~idAViHFAg~~~Vg-----ESv~~Pl~YY~NNv~ 105 (341) T TIGR01179 58 -LRDRELLRRVFEKQQLEHKIDAVIHFAGLIAVG-----ESVQKPLKYYRNNVV 105 (341) T ss_pred -CHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCH-----HHHHHHHHHHHHHHH T ss_conf -515799999987743116754675201121252-----557524544000468 |
1.3.2 from EC) interconverts UDP-glucose and UDP-galactose which are precursors of glucose- and galactose-containing exopolysaccharides (EPS). A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded and described by a separate model. ; GO: 0003978 UDP-glucose 4-epimerase activity, 0006012 galactose metabolic process. |
| >PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.16 Score=30.07 Aligned_cols=103 Identities=21% Similarity=0.257 Sum_probs=55.5 Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEE-CHHHHHHHC--CCCCCCEEEEECCCCCCCCHHHHHHHHHHCC Q ss_conf 8876999878852562079999999996598399995-723767624--4468751687525656533123321110001 Q gi|254781097|r 3 ENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLIT-DRRARSFIT--DFPADSIYEIVSSQVRFSNPFVFWNSLVILW 79 (369) Q Consensus 3 ~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 79 (369) T Consensus 97 ~~g~vv~VgGGvG--~Ap~~piakalk~~Gn~v~~I~Gar~k~~vilede~~~~~d~~~itTDDGS~G~kG~V------- 167 (760) T PRK12778 97 NFGTVVCAGGGVG--VAPMLPIVQALKAAGNRVITVLAGRSKELIILEKEMRESSDEVIIMTDDGSYGRKGLV------- 167 (760) T ss_pred CCCEEEEEECCEE--HHHHHHHHHHHHHCCCEEEEEEECCCHHHEEHHHHHHHHCCEEEEECCCCCCCCCCEE------- T ss_conf 7873999958696--8987999999998699599998426633403599999743869998589999727456------- Q ss_pred CCCHHHHHHHHHCCCCEEEECCCCCCHHHH------HHHHHCCCCCEE Q ss_conf 211013555420344424312653210247------888623411012 Q gi|254781097|r 80 KAFIASLRLIKKLKPNVVVGFGGYHSISPL------LAGMILRIPSMV 121 (369) Q Consensus 80 ~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~------iaA~~l~iP~vi 121 (369) T Consensus 168 --T~~L~~ll~~~~~D~v~aiG-----P~~MMk~v~~~t~~~~i~t~v 208 (760) T PRK12778 168 --TEGVEEVIKREKVNKCFAIG-----PAIMMKFVCLLTKKYEIPTIV 208 (760) T ss_pred --CHHHHHHHHCCCCCEEEEEC-----CHHHHHHHHHHHCCCCCCEEE T ss_conf --67799997488987899979-----789999999872605897489 |
|
| >PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.22 Score=29.12 Aligned_cols=107 Identities=21% Similarity=0.240 Sum_probs=55.6 Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH-HHHHCCCC----CCCEEEEECCCCCCCCHHHHHHHHHH Q ss_conf 88769998788525620799999999965983999957237-67624446----87516875256565331233211100 Q gi|254781097|r 3 ENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRA-RSFITDFP----ADSIYEIVSSQVRFSNPFVFWNSLVI 77 (369) Q Consensus 3 ~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~ 77 (369) T Consensus 98 ~~G~Vv~VgGGvG--iApv~PiakaLke~GN~V~~IiGaR~kdlvilede~~~~sdel~--i~TDDGS~G~kG~------ 167 (993) T PRK12775 98 KAGHVVFVGGGLG--VAPIFPQLRAFKEAGARTTAIMGFRNKDLVFWEDKFREYADDLI--ICTDDGSYGEPGF------ 167 (993) T ss_pred CCCEEEEEECCEE--HHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHHHCCCEE--EECCCCCCCCCCE------ T ss_conf 5773999908774--30238999999985990899984266002334999986468389--9768999875642------ Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHCCCCCEEE Q ss_conf 01211013555420344424312653210-2478886234110122 Q gi|254781097|r 78 LWKAFIASLRLIKKLKPNVVVGFGGYHSI-SPLLAGMILRIPSMVH 122 (369) Q Consensus 78 ~~~~~~~~~~ii~~~kPDvVi~tGGy~s~-P~~iaA~~l~iP~vih 122 (369) T Consensus 168 ---VTd~L~elle~~k~D~V~aIGP~~MMK~vs~~Tk~ygIpT~VS 210 (993) T PRK12775 168 ---VTAALKRVCEKQKPDKVVAIGPMPMMHACVETTRPFGVKTMVS 210 (993) T ss_pred ---EHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEE T ss_conf ---0699999986689888999898899999998725259975896 |
|
| >pfam06032 DUF917 Protein of unknown function (DUF917) | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.24 Score=28.92 Aligned_cols=103 Identities=21% Similarity=0.252 Sum_probs=55.3 Q ss_pred EEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCC-CCHHHHHHHHHHCCCCCHHHH Q ss_conf 9987885256207999999999659839999572376762444687516875256565-331233211100012110135 Q gi|254781097|r 8 LLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRF-SNPFVFWNSLVILWKAFIASL 86 (369) Q Consensus 8 li~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~ 86 (369) T Consensus 15 vLGsGG-GGdp~~~~l~~~~~l~~~~~v~lv~~del-------~dd~-~vv~v~~~GaP~v~~Eklp~g~e~~~a~~~le 85 (352) T pfam06032 15 VLGTGG-GGDPYIGKLLLRAALKEGGPVELVSPDEL-------PDDD-LVVTVGMMGAPTVSIEKLPSGDEALRAVELLE 85 (352) T ss_pred EEEECC-CCCHHHHHHHHHHHHHCCCCEEEEEHHHC-------CCCC-EEEEEEECCCCCCHHCCCCCCHHHHHHHHHHH T ss_conf 998778-97479999999999975997699747565-------9888-89997453677101124778358999999999 Q ss_pred HHHHHCCCCEEEEC--CCCCCHHHHHHHHHCCCCCE Q ss_conf 55420344424312--65321024788862341101 Q gi|254781097|r 87 RLIKKLKPNVVVGF--GGYHSISPLLAGMILRIPSM 120 (369) Q Consensus 87 ~ii~~~kPDvVi~t--GGy~s~P~~iaA~~l~iP~v 120 (369) T Consensus 86 ~-~~g~~~~ai~~~EiGG~N~~~pl~~Aa~~GlPvv 120 (352) T pfam06032 86 K-YLGRKVDAIMPIEIGGSNSLIPLLVAARLGLPVV 120 (352) T ss_pred H-HHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEE T ss_conf 9-8599966898564476215889999998399676 |
This family consists of hypothetical bacterial and archaeal proteins of unknown function. |
| >pfam04413 Glycos_transf_N 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.6 Score=26.15 Aligned_cols=103 Identities=21% Similarity=0.209 Sum_probs=57.5 Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCC--EEEEEE-CHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC Q ss_conf 76999878852562079999999996598--399995-723767624446875168752565653312332111000121 Q gi|254781097|r 5 NVILLVAGGTGGHVFPAVALSHELKNRGY--AVYLIT-DRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKA 81 (369) Q Consensus 5 ~~ili~~gGTGGHi~palala~~L~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (369) T Consensus 22 ~~IWiHaa-SvGE~~~~~~li~~l~~~~p~~~iliT~~T~sg~~~~~~~~~~~~~~~y-lP----------------~D~ 83 (186) T pfam04413 22 PLIWLHAA-SVGEVLAALPLIEALKARYPGLRILVTTTTPTGAELARKLLPDRVIHQY-LP----------------LDL 83 (186) T ss_pred CEEEEEEC-CHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCEEEE-CC----------------CCC T ss_conf 88999839-8899999999999999868996299983581699999986789807997-77----------------677 Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCHHHH-HHHHHCCCCCEEECCCCCC Q ss_conf 1013555420344424312653210247-8886234110122153200 Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGYHSISPL-LAGMILRIPSMVHEQNVIM 128 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy~s~P~~-iaA~~l~iP~vihEqN~v~ 128 (369) T Consensus 84 ~~~~~~fl~~~~P~~~i~~e~Ei-WPnli~~~~~~~ip~~li--nar~ 128 (186) T pfam04413 84 PGAVRRFLKHWRPDLLVIVETEL-WPNLIAAAKKRGIPVVLV--NARL 128 (186) T ss_pred HHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHCCCCEEEE--ECCC T ss_conf 79999999985998899986132-099999999879999999--7776 |
Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family. |
| >PRK12311 rpsB 30S ribosomal protein S2; Provisional | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.84 Score=25.12 Aligned_cols=113 Identities=15% Similarity=0.083 Sum_probs=57.1 Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCC--CCEEEEECCCCCC--CCHH---HHHHHHHHC---CC--- Q ss_conf 525620799999999965983999957237676244468--7516875256565--3312---332111000---12--- Q gi|254781097|r 14 TGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPA--DSIYEIVSSQVRF--SNPF---VFWNSLVIL---WK--- 80 (369) Q Consensus 14 TGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~---~~~~~l~~~---~~--- 80 (369) T Consensus 48 T~~~L~~A~~~v~~ia~~Gg~ILFVGTK~qa~~~V~~~A~r~~~~YVn~RWLGGtLTN~~TI~~sI~rL~~le~~~~~g~ 127 (332) T PRK12311 48 TVPLLHRALQAVSDTVAKGGRVLFVGTKRQAQDAVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIKRLRKLDEVLSSGD 127 (332) T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC T ss_conf 99999999999999996699799986878899999999998399657340027635559999999999999999861265 Q ss_pred --CCH-HHHHHHHH----------------CCCCEEEECCCCCCHHHHHHHHHCCCCCE-EECCCC Q ss_conf --110-13555420----------------34442431265321024788862341101-221532 Q gi|254781097|r 81 --AFI-ASLRLIKK----------------LKPNVVVGFGGYHSISPLLAGMILRIPSM-VHEQNV 126 (369) Q Consensus 81 --~~~-~~~~ii~~----------------~kPDvVi~tGGy~s~P~~iaA~~l~iP~v-ihEqN~ 126 (369) T Consensus 128 ~~~ltKKE~l~l~Re~~KL~k~lgGIk~M~~lPDlvfViD~~kE~iAV~EA~kLgIPvIaIvDTN~ 193 (332) T PRK12311 128 AGAYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQRLGIPVAAIVDTNC 193 (332) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCC T ss_conf 233587889999879999998546254205599989996897338999999980979899973899 |
|
| >TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1 | Back alignment and domain information |
|---|
Probab=91.61 E-value=1.1 Score=24.26 Aligned_cols=99 Identities=19% Similarity=0.262 Sum_probs=53.4 Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCC-CEEEEECCCCCCCCHHHHHHHHHHC--- Q ss_conf 887699987885256207999999999659839999572376762444687-5168752565653312332111000--- Q gi|254781097|r 3 ENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPAD-SIYEIVSSQVRFSNPFVFWNSLVIL--- 78 (369) Q Consensus 3 ~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~--- 78 (369) T Consensus 141 t~~kVAViGaGPA-----GL~cA~elAk~Gh~VtvfE-------ALhKPGGV~~YGIPefRLpKei~~~E~k~LkklGv~ 208 (462) T TIGR01316 141 TKKKVAVIGAGPA-----GLACASELAKKGHEVTVFE-------ALHKPGGVLAYGIPEFRLPKEIVETEVKKLKKLGVK 208 (462) T ss_pred CCCEEEEECCCCH-----HHHHHHHHHHCCCEEEEEE-------ECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEE T ss_conf 8877999846821-----4688999974798699997-------148998567536888548757889888876326637 Q ss_pred -CCCCH--H---HHHHHHHCCCCEEE-ECCCCCCHHHHHHHHHCCCCCE Q ss_conf -12110--1---35554203444243-1265321024788862341101 Q gi|254781097|r 79 -WKAFI--A---SLRLIKKLKPNVVV-GFGGYHSISPLLAGMILRIPSM 120 (369) Q Consensus 79 -~~~~~--~---~~~ii~~~kPDvVi-~tGGy~s~P~~iaA~~l~iP~v 120 (369) T Consensus 209 fr~~~lvGkt~TL~eL~~~YGfDAVFIgtG--AG~p-----kl~NipG~ 250 (462) T TIGR01316 209 FRTDYLVGKTVTLEELLEKYGFDAVFIGTG--AGLP-----KLLNIPGE 250 (462) T ss_pred EEECCEECCCHHHHHHHHHCCCCEEEEEEC--CCCC-----EECCCCCH T ss_conf 994437505112888887519707999506--8987-----00167843 |
4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-23 Score=182.29 Aligned_cols=261 Identities=17% Similarity=0.205 Sum_probs=155.4 Q ss_pred EEEE-E-CC-CCH-HHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCC--CCCCCEEEEECCCCCCCCHHHHHHHHHHCC Q ss_conf 6999-8-78-852-5620799999999965983999957237676244--468751687525656533123321110001 Q gi|254781097|r 6 VILL-V-AG-GTG-GHVFPAVALSHELKNRGYAVYLITDRRARSFITD--FPADSIYEIVSSQVRFSNPFVFWNSLVILW 79 (369) Q Consensus 6 ~ili-~-~g-GTG-GHi~palala~~L~~~g~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 79 (369) T Consensus 2 kI~fr~d~~~~iG~GH~~RclaLA~~l~~~g~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 67 (280) T TIGR03590 2 RILFRADASSEIGLGHVMRCLTLARELRKRGAEVAFACKTLPGDLIDLILSAGFPVYVLPDTSSWQ-------------- 67 (280) T ss_pred EEEEEEECCCCEEHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCEEECCCCCCCC-------------- T ss_conf 799999678991320899999999999988994999992795889999997598179816756520-------------- Q ss_pred CCCHHHHHHHHHCCCCEEEECCCCCCHHHH-HHHHHCCCCCEE-ECCCCCCHHHHHHHHHHHHHHHCCCCC----CC-CC Q ss_conf 211013555420344424312653210247-888623411012-215320015677889999987413432----22-23 Q gi|254781097|r 80 KAFIASLRLIKKLKPNVVVGFGGYHSISPL-LAGMILRIPSMV-HEQNVIMGKANRLLSWGVQIIARGLVS----SQ-KK 152 (369) Q Consensus 80 ~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~-iaA~~l~iP~vi-hEqN~v~G~~nk~l~~~a~~v~~~~~~----~~-~~ 152 (369) T Consensus 68 ~~~~~~~~~~~~~~~d~vI-iD~y~~~~~~~~~lk~~~~~~i~iDD~~~~--------~~~~d~vin~~~~~~~~~y~~~ 138 (280) T TIGR03590 68 DDALELINLLEKEKFDILI-VDHYALDADWEKLIKHFGRKLLVIDDLADR--------PHDCDLLLDQNPGADALDYQGL 138 (280) T ss_pred CCHHHHHHHHHHCCCCEEE-EECCCCCHHHHHHHHHHCCEEEEEECCCCC--------CCCCCEEECCCCCCCHHHHCCC T ss_conf 1299999999737979999-925999979999999839839999367654--------6561425414544475663644 Q ss_pred CCCCCCEEEEC---CCCHHHHHHHHHHHHHHCCCCCCEEEE-EECCCCCCCHHHHHHHHHHHHHHH-CCCCCEEEEEECC Q ss_conf 55667325304---443245654333443311447814898-630432221023334454432320-2466067762025 Q gi|254781097|r 153 VLLRKIIVTGN---PIRSSLIKMKDIPYQSSDLDQPFHLLV-FGGSQGAKVFSDIVPKSIALIPEM-QRKRLVIMQQVRE 227 (369) Q Consensus 153 ~~~~k~~~~G~---PvR~~~~~~~~~~~~~~~~~~~~~ILv-~GGS~Ga~~ln~~v~~~~~~l~~~-~~~~~~v~~~~g~ 227 (369) T Consensus 139 ~~~~~~~l~G~~Y~~lr~~F~~~~~~~~~~---~~~~~Ili~~GGsD~~-~lt~---~il~~l~~~~~~~~i~vvig~~~ 211 (280) T TIGR03590 139 VPANCRLLLGPSYALLREEFYQLRTANKRR---KPLRRVLVSFGGADPD-NLTL---KLLSALAESQINISITLVTGSSN 211 (280) T ss_pred CCCCCEEEECCCCCCCCHHHHHHHHHHHCC---CCCCEEEEEECCCCHH-HHHH---HHHHHHHHHCCCCCEEEEECCCC T ss_conf 886766986575343578887630322103---6553289997787700-0899---99999985166856799986798 Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH Q ss_conf 516776532210011113454444514443004489972542023334552960487533552489899989999 Q gi|254781097|r 228 DDKEKVQKQYDELGCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYL 302 (369) Q Consensus 228 ~~~~~~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l 302 (369) T Consensus 212 ~~~~~i~~~~~~-~~~~~~~~~~~~m~~~m~~aDlaI~-agG~t~~El~~~gvP~i~i~~---a-dNQ~~~a~~l 280 (280) T TIGR03590 212 PNLDELKKFAKE-YPNIILFIDVENMAELMNEADLAIG-AAGSTSWERCCLGLPSLSIVL---A-ENQQSNSQQL 280 (280) T ss_pred CCHHHHHHHHHH-CCCEEEECCHHHHHHHHHHCCEEEE-CCCHHHHHHHHHCCCEEEEEE---C-CCHHHHHHHC T ss_conf 766999999972-8996996598899999997799998-596589999994999899997---0-2569998509 |
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR00661 MJ1255 conserved hypothetical protein; InterPro: IPR005262 The function of this domain is unknown | Back alignment and domain information |
|---|
Probab=99.08 E-value=3e-09 Score=84.14 Aligned_cols=290 Identities=16% Similarity=0.171 Sum_probs=157.7 Q ss_pred EEEEECCCCH-HHHHHHHHHHHHHHHCCCEEEEEECHH-HHHHHCCCCCCCEEEEECCCCCCCC----HHHH-HHHHH-- Q ss_conf 6999878852-562079999999996598399995723-7676244468751687525656533----1233-21110-- Q gi|254781097|r 6 VILLVAGGTG-GHVFPAVALSHELKNRGYAVYLITDRR-ARSFITDFPADSIYEIVSSQVRFSN----PFVF-WNSLV-- 76 (369) Q Consensus 6 ~ili~~gGTG-GHi~palala~~L~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~l~-- 76 (369) T Consensus 1 ~~~~~~~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (353) T TIGR00661 1 KILYGVCGEGFGHAARSGAIGDALKEQDYEVDYLASGRPAENYLSKEGFGDFETFPGLNLAGEDGKVNDVKTFLRKKELL 80 (353) T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCHHHHHCCCEEECCCCCCHHHHHHHHHHCCC T ss_conf 90342025774303567777876420111044553275124455543000122211311201566402577777640245 Q ss_pred --HCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEEC------CCCCC--HH--HHHHHH-------- Q ss_conf --00121101355542034442431265321024788862341101221------53200--15--677889-------- Q gi|254781097|r 77 --ILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHE------QNVIM--GK--ANRLLS-------- 136 (369) Q Consensus 77 --~~~~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihE------qN~v~--G~--~nk~l~-------- 136 (369) T Consensus 81 p~~~~~~~~~~~~~~~~~~~d~~~~d~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (353) T TIGR00661 81 PRDLKENLRLEVKILRDFGPDLILSDF---EPYTAVAAKLLKIPLIGISNLHVINQNYFLYPLPLKGDKWPDEAVLRHFA 157 (353) T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECC---HHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH T ss_conf 035899999988877641774254032---04678887764043000032012111012111011134556788888764 Q ss_pred HHHHHHHC-CCCCCCCCCCC--C---CCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHH Q ss_conf 99998741-34322223556--6---732530444324565433344331144781489863043222102333445443 Q gi|254781097|r 137 WGVQIIAR-GLVSSQKKVLL--R---KIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIAL 210 (369) Q Consensus 137 ~~a~~v~~-~~~~~~~~~~~--~---k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~ 210 (369) T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-------~~~~~~~~~~~~~g~~~----~~~~~~~~~~ 226 (353) T TIGR00661 158 PRPERLLLPWYPFPEPILPYNLPIIKAPEFIGPLLRYDVDDL-------DPYGGDYILVYLGGFEN----NNKLLELLGK 226 (353) T ss_pred HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC-------CCCCCCEEEEEECCCHH----HHHHHHHHHH T ss_conf 323453023212321024211102310145445666544310-------01246447897356213----6899998875 Q ss_pred HHHHCCCCCEEEEEECCCCHHH-HHH--HHHHC-CCCCCCCCCCC-CCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEE Q ss_conf 2320246606776202551677-653--22100-11113454444-5144430044899725420233345529604875 Q gi|254781097|r 211 IPEMQRKRLVIMQQVREDDKEK-VQK--QYDEL-GCKATLACFFK-DIERYIVEANLLICRSGALTVSEIAVIGRPAILV 285 (369) Q Consensus 211 l~~~~~~~~~v~~~~g~~~~~~-~~~--~~~~~-~~~~~v~~f~~-~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlI 285 (369) T Consensus 227 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 304 (353) T TIGR00661 227 IDLK--NNLNVKFVCYGPEVPGKLLRDLNLNELKDENVELRRLNEGDFKEDLENAAGVITNGGFSLPSEALALGKPLLVV 304 (353) T ss_pred HHHH--CCCCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEE T ss_conf 4320--25613788605421346764213100135642588603125788775543311157502356676515641341 Q ss_pred ECCCCCCCHHHHHHHHHHHCCCEEEEEH Q ss_conf 3355248989998999998898899800 Q gi|254781097|r 286 PYPHSVDQDQLHNAYYLQEGGGAKVITE 313 (369) Q Consensus 286 P~p~a~~~hQ~~NA~~l~~~G~a~~i~~ 313 (369) T Consensus 305 p~~--~~~~~~~~~~~~~~~g~~~~~~~ 330 (353) T TIGR00661 305 PLL--GQFEQGLNAVKLEDLGLGEALEF 330 (353) T ss_pred CCC--CCHHHHCCHHHHHHHCHHHHHHH T ss_conf 144--42012101011122010345655 |
A small region (~50 amino acids) within the domain appears to be related to a family of sugar transferases. . |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.3e-06 Score=63.98 Aligned_cols=193 Identities=21% Similarity=0.245 Sum_probs=98.2 Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCC Q ss_conf 52562079999999996598399995723767624446875168752565653312332111000121101355542034 Q gi|254781097|r 14 TGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLRLIKKLK 93 (369) Q Consensus 14 TGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~~~k 93 (369) T Consensus 12 ~GG~~~~~~~l~~~l~~~gh~v~v~~----------------------------------------~~~~~~~~~~~~~~ 51 (229) T cd01635 12 GGGVELVLLDLAKALARRGHEVEVVA----------------------------------------LLLLLLLRILRGFK 51 (229) T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEEE----------------------------------------CCHHHHHHHHHHCC T ss_conf 99599999999999998699999993----------------------------------------88499999998099 Q ss_pred CCEEEECCCCCCHHHH-HHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHH Q ss_conf 4424312653210247-888623411012215320015677889999987413432222355667325304443245654 Q gi|254781097|r 94 PNVVVGFGGYHSISPL-LAGMILRIPSMVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLIKM 172 (369) Q Consensus 94 PDvVi~tGGy~s~P~~-iaA~~l~iP~vihEqN~v~G~~nk~l~~~a~~v~~~~~~~~~~~~~~k~~~~G~PvR~~~~~~ 172 (369) T Consensus 52 pDiIH~h~~~~~~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~---~~~~~~-------~~~~~~~~vgrl~~------ 115 (229) T cd01635 52 PDVVHAHGYYPAPLALLLAARLLGIPLVLTVHGVNRSLLEGVPL---SLLALS-------IGLADKVFVGRLAP------ 115 (229) T ss_pred CCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH---HHHHHC-------CCCEEEEEEEECCC------ T ss_conf 88899899727999999999848991999989998034244555---555421-------13618999995462------ Q ss_pred HHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH--CCCCCCCCCC- Q ss_conf 3334433114478148986304322210233344544323202466067762025516776532210--0111134544- Q gi|254781097|r 173 KDIPYQSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDE--LGCKATLACF- 249 (369) Q Consensus 173 ~~~~~~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~--~~~~~~v~~f- 249 (369) T Consensus 116 ------------------------~K~~~-~li~a~~~l~~~-~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (229) T cd01635 116 ------------------------EKGLD-DLIEAFALLKER-GPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGL 169 (229) T ss_pred ------------------------CCCHH-HHHHHHHHHHHH-CCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEECCCC T ss_conf ------------------------12999-999999998867-8994899996880688999999972887746323622 Q ss_pred --CCCCHHHHHCCCEEEECCC----CHHHHHHHHHCCCEEEEECC Q ss_conf --4451444300448997254----20233345529604875335 Q gi|254781097|r 250 --FKDIERYIVEANLLICRSG----ALTVSEIAVIGRPAILVPYP 288 (369) Q Consensus 250 --~~~m~~~~~~aDlvIsraG----~~Ti~E~~~~g~P~IlIP~p 288 (369) T Consensus 170 ~~~~~~~~~~~~~d~~v~pS~~E~~~~~~~EA~a~G~pvi~~~~g 214 (229) T cd01635 170 DPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVG 214 (229) T ss_pred CCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCC T ss_conf 106789999970680660566678888999999829989987899 |
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >pfam06258 DUF1022 Protein of unknown function (DUF1022) | Back alignment and domain information |
|---|
Probab=98.61 E-value=6e-06 Score=61.08 Aligned_cols=261 Identities=16% Similarity=0.189 Sum_probs=125.0 Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCC Q ss_conf 25620799999999965983999957237676244468751687525656533123321110001211013555420344 Q gi|254781097|r 15 GGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLRLIKKLKP 94 (369) Q Consensus 15 GGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~~~kP 94 (369) T Consensus 1 aG~~~Q~~gLAeaL~-~~~~~~~i~~~~~~~~~------------p~--~~~~---------~~~~~~~~~~~~~~~p~P 56 (308) T pfam06258 1 AGHENQALGLAEALG-LPYEIREVRVRKPWRWL------------PR--RLPA---------PLWAILGPFAPALEPPWP 56 (308) T ss_pred CCCHHHHHHHHHHCC-CCCEEEEEECCCHHHHC------------CC--CCCC---------CHHHHHCCCCCCCCCCCC T ss_conf 963889999999709-98717999528677756------------76--5785---------045542345411158999 Q ss_pred CEEEECCCCCCHHHHHHHHHC-CCC-CEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC-CCCCEE-EECC--CCHH Q ss_conf 424312653210247888623-411-012215320015677889999987413432222355-667325-3044--4324 Q gi|254781097|r 95 NVVVGFGGYHSISPLLAGMIL-RIP-SMVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVL-LRKIIV-TGNP--IRSS 168 (369) Q Consensus 95 DvVi~tGGy~s~P~~iaA~~l-~iP-~vihEqN~v~G~~nk~l~~~a~~v~~~~~~~~~~~~-~~k~~~-~G~P--vR~~ 168 (369) T Consensus 57 dliIs~Gr-~t~~~~~~lkr~~~~~~~~I~i~~P~~------~~~~FDliv~--P~H-D~~~~g~NVi~t~gal~~i~~~ 126 (308) T pfam06258 57 DLVIGAGR-QTHPLLRLLRRLSGGKTKTVQIMDPRL------PLGRFDLVIA--PEH-DGVPPGPNVLLTVGALHRVTPQ 126 (308) T ss_pred CEEEECCC-HHHHHHHHHHHHCCCCCEEEEEECCCC------CCCCCCCEEC--CCC-CCCCCCCCEEEECCCCCCCCHH T ss_conf 88997881-479999999997499967999818998------8134771025--745-5888999789625755547877 Q ss_pred HHHHHHHHHHH-HCCCCCCEEEEEECCCCCCCHHHH----HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCC-C Q ss_conf 56543334433-114478148986304322210233----34454432320246606776202551677653221001-1 Q gi|254781097|r 169 LIKMKDIPYQS-SDLDQPFHLLVFGGSQGAKVFSDI----VPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELG-C 242 (369) Q Consensus 169 ~~~~~~~~~~~-~~~~~~~~ILv~GGS~Ga~~ln~~----v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~-~ 242 (369) T Consensus 127 ~l~~~~~~~~~~~~~~~p~i~vLIGG~sk~~~~~~~~~~~l~~~i~~l~~~~~~~l~it--~SRRTP~~~~~~l~~~~~~ 204 (308) T pfam06258 127 RLAEAAAAWPELAALPRPRVAVLVGGPSKHFRWDADAARRLLEQLQALLEAYGGSLLIT--TSRRTPEAAEAALRKLLGP 204 (308) T ss_pred HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE--ECCCCCHHHHHHHHHHHCC T ss_conf 88777766554024778769999655787888899999999999999998779729999--4688969999999986089 Q ss_pred CCCCCCCC---CC-CHHHHHCCCEEEECCCC-HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEE Q ss_conf 11345444---45-14443004489972542-0233345529604875335524898999899999889889980 Q gi|254781097|r 243 KATLACFF---KD-IERYIVEANLLICRSGA-LTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVIT 312 (369) Q Consensus 243 ~~~v~~f~---~~-m~~~~~~aDlvIsraG~-~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~ 312 (369) T Consensus 205 ~~~~~~~~~~~~Npy~~~L~~Ad~iiVT~DSvSMisEA~~tGkPV~i~~l~~~~~r~~~f~-~~L~~~g~~r~f~ 278 (308) T pfam06258 205 RPGLYVWDGTGPNPYFGFLAWADAVVVTADSVSMVSEAAATGAPVGVLPLEGKRGKFARFH-DSLEERGRVRPFT 278 (308) T ss_pred CCEEEECCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH-HHHHHCCCEEECC T ss_conf 9728982798864589999858868990671889999986499779996776665999999-9999879906777 |
This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown. |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.30 E-value=9.7e-05 Score=52.64 Aligned_cols=273 Identities=14% Similarity=0.145 Sum_probs=125.5 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHH Q ss_conf 99987885256207999999999659839999572376762444687516875256565331233211100012110135 Q gi|254781097|r 7 ILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASL 86 (369) Q Consensus 7 ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 86 (369) T Consensus 4 ~aisD~Rt-Gnt~QaiaLa~~l~r~eyttk~l~~----~~l~~lP~~w---l~~yp~~------~~~~l~----~~~--~ 63 (329) T COG3660 4 WAISDGRT-GNTHQAIALAEQLTRSEYTTKLLEY----NNLAKLPNFW---LAYYPIH------ILRELF----GPR--L 63 (329) T ss_pred EEEECCCC-CCHHHHHHHHHHHHCCCEEEEEEEC----CCCCCCCHHH---HHCCCCH------HHHHHH----CCC--C T ss_conf 89615877-6389999999986046437899512----2001274466---5127627------678763----670--0 Q ss_pred HHHHHCCCCEEEECCCCCCHHHHHHHH--HCCCCCEEECCC-CCCHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCC-EE Q ss_conf 554203444243126532102478886--234110122153-20015677889999987413432222--3556673-25 Q gi|254781097|r 87 RLIKKLKPNVVVGFGGYHSISPLLAGM--ILRIPSMVHEQN-VIMGKANRLLSWGVQIIARGLVSSQK--KVLLRKI-IV 160 (369) Q Consensus 87 ~ii~~~kPDvVi~tGGy~s~P~~iaA~--~l~iP~vihEqN-~v~G~~nk~l~~~a~~v~~~~~~~~~--~~~~~k~-~~ 160 (369) T Consensus 64 ~r~p~~~Pdl~I~aG-rrta~l~~~lkk~~~~-~~vVqI~~Prlp~-------~~fDlvivp~HD~~~~~s~~~~Nilpi 134 (329) T COG3660 64 SRKPEQRPDLIITAG-RRTAPLAFYLKKKFGG-IKVVQIQDPRLPY-------NHFDLVIVPYHDWREELSDQGPNILPI 134 (329) T ss_pred CCCCCCCCCEEEECC-CCHHHHHHHHHHHCCC-CEEEEEECCCCCC-------CCCEEEECCCHHHHHHHHCCCCCEEEC T ss_conf 017557985588615-2100789999986189-5389950799985-------302178426024666531157845542 Q ss_pred EEC--CCCHHHHHHHHHHHHHH-CCCCCCEEEEEECCCCCCCHHHHHHH----HHHHHHHHCCCCCEEEEEECCCCHHHH Q ss_conf 304--44324565433344331-14478148986304322210233344----544323202466067762025516776 Q gi|254781097|r 161 TGN--PIRSSLIKMKDIPYQSS-DLDQPFHLLVFGGSQGAKVFSDIVPK----SIALIPEMQRKRLVIMQQVREDDKEKV 233 (369) Q Consensus 161 ~G~--PvR~~~~~~~~~~~~~~-~~~~~~~ILv~GGS~Ga~~ln~~v~~----~~~~l~~~~~~~~~v~~~~g~~~~~~~ 233 (369) T Consensus 135 ~Gs~h~Vt~~~lAa~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~--~g~~~lisfSRRTp~~~ 212 (329) T COG3660 135 NGSPHNVTSQRLAALREAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN--QGGSFLISFSRRTPDTV 212 (329) T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH--CCCEEEEEEECCCCHHH T ss_conf 6887756577756458887863778774499996678877766778999999999999874--78518999606891789 Q ss_pred HHHHHH----CCCCC---CCCCCCCCCHHHHHCCCEEEECCCCHH-HHHHHHHCCCEEEEECC-CC-CCCHHHHHHHHHH Q ss_conf 532210----01111---345444451444300448997254202-33345529604875335-52-4898999899999 Q gi|254781097|r 234 QKQYDE----LGCKA---TLACFFKDIERYIVEANLLICRSGALT-VSEIAVIGRPAILVPYP-HS-VDQDQLHNAYYLQ 303 (369) Q Consensus 234 ~~~~~~----~~~~~---~v~~f~~~m~~~~~~aDlvIsraG~~T-i~E~~~~g~P~IlIP~p-~a-~~~hQ~~NA~~l~ 303 (369) T Consensus 213 ~s~l~~~l~s~~~i~w~~~d~g~N-PY~~~La~Adyii~TaDSinM~sEAasTgkP-v~~~~~~~~~s~K~r~F-i~~L~ 289 (329) T COG3660 213 KSILKNNLNSSPGIVWNNEDTGYN-PYIDMLAAADYIISTADSINMCSEAASTGKP-VFILEPPNFNSLKFRIF-IEQLV 289 (329) T ss_pred HHHHHHCCCCCCEEEECCCCCCCC-CHHHHHHHCCEEEEECCHHHHHHHHHCCCCC-EEEEECCCCCHHHHHHH-HHHHH T ss_conf 999971356684457379878988-1688885213378704301245787604997-59980698622778999-99998 Q ss_pred HCCCEEEEEH Q ss_conf 8898899800 Q gi|254781097|r 304 EGGGAKVITE 313 (369) Q Consensus 304 ~~G~a~~i~~ 313 (369) T Consensus 290 eq~~AR~f~~ 299 (329) T COG3660 290 EQKIARPFEG 299 (329) T ss_pred HHHHCCCCCC T ss_conf 7533152575 |
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.0014 Score=44.52 Aligned_cols=265 Identities=12% Similarity=0.115 Sum_probs=117.0 Q ss_pred CCCC-CEEEEECCCCHHHHHHHHHHHHHHHHCCCE--EEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHH Q ss_conf 9988-769998788525620799999999965983--9999572376762444687516875256565331233211100 Q gi|254781097|r 1 MSEN-NVILLVAGGTGGHVFPAVALSHELKNRGYA--VYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVI 77 (369) Q Consensus 1 M~~~-~~ili~~gGTGGHi~palala~~L~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 77 (369) T Consensus 1 m~~~~kkILIir~~~iGD~il~tP~i~~Lk~~~P~a~I~~l~~~~~~~ll~~~P~id--~i~~~~~k~~~~~~~~----- 73 (352) T PRK10422 1 MDKPFRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSENPEIN--ALYGIKNKKAGASEKI----- 73 (352) T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCC--EEEEECCCCCCHHHHH----- T ss_conf 998997799975886049999999999999988998899997804799983399962--7988667554456779----- Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEE-ECCCCCCHH-HHHHHH--------HHHHHHHCCCC Q ss_conf 01211013555420344424312653210247888623411012-215320015-677889--------99998741343 Q gi|254781097|r 78 LWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMV-HEQNVIMGK-ANRLLS--------WGVQIIARGLV 147 (369) Q Consensus 78 ~~~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vi-hEqN~v~G~-~nk~l~--------~~a~~v~~~~~ 147 (369) T Consensus 74 --~~~~~l~~~Lr~~~yD~vi~l~~--~~~~~~l~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~h~v~~~l-~ll 148 (352) T PRK10422 74 --KNFFSLIKVLRANKYDLIVNLTD--QWMVALLVRLLNARVKISQDYHHRQSAFWRKSFTHLVPLQGGHVVESNL-SVL 148 (352) T ss_pred --HHHHHHHHHHHHCCCCEEEECCC--CHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH-HHH T ss_conf --99999999985548877886676--6499999998389858656665210145565531468875415999999-998 Q ss_pred CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC-CCH-HHHHHHHHHHHHHHCCCCCEEEEEE Q ss_conf 22223556673253044432456543334433114478148986304322-210-2333445443232024660677620 Q gi|254781097|r 148 SSQKKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGA-KVF-SDIVPKSIALIPEMQRKRLVIMQQV 225 (369) Q Consensus 148 ~~~~~~~~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga-~~l-n~~v~~~~~~l~~~~~~~~~v~~~~ 225 (369) T Consensus 149 ~~-l~~~~~~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~-ivi~pga~~~~K~Wp~e~~a~l~~~L~~~---g~~vvl~g 222 (352) T PRK10422 149 TP-LGLSSLVKETT-MSYRPESWKRMRRQLDHLGVTQNY-VVIQPTARQIFKCWDNDKFSAVIDALQAR---GYEVVLTS 222 (352) T ss_pred HH-CCCCCCCCCCC-CCCCHHHHHHHHHHHHHCCCCCCE-EEEECCCCCCCCCCCHHHHHHHHHHHHHC---CCEEEEEC T ss_conf 64-69986675556-678878999999876744888987-99967899856779999999999999847---99199972 Q ss_pred CCC--CHHHHHHHHHHCCCCCCCCCC-----CCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEE Q ss_conf 255--167765322100111134544-----445144430044899725420233345529604875 Q gi|254781097|r 226 RED--DKEKVQKQYDELGCKATLACF-----FKDIERYIVEANLLICRSGALTVSEIAVIGRPAILV 285 (369) Q Consensus 226 g~~--~~~~~~~~~~~~~~~~~v~~f-----~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlI 285 (369) T Consensus 223 gp~~~e~~~~~~i~~~~-~~~~v~~l~G~tsL~el~ali~~a~l~I~n-DSGpmHlAaAlg~P~Val 287 (352) T PRK10422 223 GPAKDDLACVNEIAQGC-QTPPVTALAGKTTFPELGALIDHAQLFIGV-DSAPAHIAAAVNTPLICL 287 (352) T ss_pred CCCHHHHHHHHHHHHHC-CCCCCEECCCCCCHHHHHHHHHHCCEEEEC-CCHHHHHHHHCCCCEEEE T ss_conf 89889999999999746-798704235788899999999817875605-981899999829998999 |
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.002 Score=43.49 Aligned_cols=256 Identities=16% Similarity=0.153 Sum_probs=116.0 Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEE--EEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCC Q ss_conf 7699987885256207999999999659839--99957237676244468751687525656533123321110001211 Q gi|254781097|r 5 NVILLVAGGTGGHVFPAVALSHELKNRGYAV--YLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAF 82 (369) Q Consensus 5 ~~ili~~gGTGGHi~palala~~L~~~g~~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (369) T Consensus 2 ~kIliir~~~iGD~vlt~p~~~~lk~~~P~a~i~~~~~~~~~~i~~~~p~I~~--vi~~~~~~~~---------~~~~~~ 70 (334) T COG0859 2 MKILVIRLSKLGDVVLTLPLLRTLKKAYPNAKIDVLVPKGFAPILKLNPEIDK--VIIIDKKKKG---------LGLKER 70 (334) T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCHHE--EEECCCCCCC---------HHHHHH T ss_conf 07999955740137769999999998789977999955431467755952416--8511211212---------138999 Q ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEE-C-CCCCCHHHHHHHH--------HHHHHHHCCCCCCCCC Q ss_conf 0135554203444243126532102478886234110122-1-5320015677889--------9999874134322223 Q gi|254781097|r 83 IASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVH-E-QNVIMGKANRLLS--------WGVQIIARGLVSSQKK 152 (369) Q Consensus 83 ~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vih-E-qN~v~G~~nk~l~--------~~a~~v~~~~~~~~~~ 152 (369) T Consensus 71 ~~l~~~lr~~~yD~vidl~~~--~ksa~l~~~~~~~~r~g~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 148 (334) T COG0859 71 LALLRTLRKERYDAVIDLQGL--LKSALLALLLGIPFRIGFDKKSARELLLNKFYPRLDKPEGQHVVERYLALLEDLGLY 148 (334) T ss_pred HHHHHHHCCCCCCEEEECHHH--HHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC T ss_conf 999998314686789974025--889999997389836314507777777763024456540245999999998760798 Q ss_pred CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCC--CCEEEEEEC-CCCC-CCHH-HHHHHHHHHHHHHCCCCCEEEEEECC Q ss_conf 55667325304443245654333443311447--814898630-4322-2102-33344544323202466067762025 Q gi|254781097|r 153 VLLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQ--PFHLLVFGG-SQGA-KVFS-DIVPKSIALIPEMQRKRLVIMQQVRE 227 (369) Q Consensus 153 ~~~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~--~~~ILv~GG-S~Ga-~~ln-~~v~~~~~~l~~~~~~~~~v~~~~g~ 227 (369) T Consensus 149 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~---~~Vvl~g~~ 217 (334) T COG0859 149 PPPEPQLDFPLPR--------PPIELAKNLAKFDRPYIVINPGASRGSAKRWPLEHYAELAELLIAKG---YQVVLFGGP 217 (334) T ss_pred CCCCCCCCCCCCC--------CHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC---CEEEEEECH T ss_conf 7667755545554--------78889865420379879996473466778899999999999999769---989994087 Q ss_pred CCHHHHHHHHHHCCCCCCCCCC--CCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEE Q ss_conf 5167765322100111134544--445144430044899725420233345529604875 Q gi|254781097|r 228 DDKEKVQKQYDELGCKATLACF--FKDIERYIVEANLLICRSGALTVSEIAVIGRPAILV 285 (369) Q Consensus 228 ~~~~~~~~~~~~~~~~~~v~~f--~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlI 285 (369) T Consensus 218 ~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l~I~~D-Sg~~HlAaA~~~P~I~i 276 (334) T COG0859 218 DEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADLVIGND-SGPMHLAAALGTPTIAL 276 (334) T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEECCC-CHHHHHHHHCCCCEEEE T ss_conf 899999999973676612179999999999996698999148-87999998739988999 |
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0069 Score=39.68 Aligned_cols=213 Identities=12% Similarity=0.162 Sum_probs=107.4 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCC--CEEEEEECHHHHHHHCCCCCCC-EEEEECCCCCCCCHHHHHHHHHHCCCCC Q ss_conf 699987885256207999999999659--8399995723767624446875-1687525656533123321110001211 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRG--YAVYLITDRRARSFITDFPADS-IYEIVSSQVRFSNPFVFWNSLVILWKAF 82 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g--~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (369) T Consensus 1 kILii~~~~iGD~i~~~p~i~~lk~~~P~~~I~~l~~~~~~~l~~~~p~id~vi~~~~~~-----~~~~-------~~~~ 68 (279) T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLELMPEVDRVIVLPKKH-----GKLG-------LGAR 68 (279) T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCCEEEEECCCC-----CCCC-------HHHH T ss_conf 989994785039999999999999988799899998936899996399857999953543-----3347-------8999 Q ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE Q ss_conf 01355542034442431265321024788862341101221532001567788999998741343222235566732530 Q gi|254781097|r 83 IASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTG 162 (369) Q Consensus 83 ~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~v~G~~nk~l~~~a~~v~~~~~~~~~~~~~~k~~~~G 162 (369) T Consensus 69 ~~~~~~l~~~~~D~~i~~~~--~~~~~~~~~~~~~~~~~g-----------------------~~~~~~----------- 112 (279) T cd03789 69 RRLARALRRRRYDLAIDLQG--SLRSALLPFLAGAPRRIG-----------------------FDGERR----------- 112 (279) T ss_pred HHHHHHHHHCCCCEEEECCC--CHHHHHHHHHCCCCEEEE-----------------------CCCHHH----------- T ss_conf 99999987649989998985--458999999849997996-----------------------781342----------- Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC-HH-HHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHC Q ss_conf 4443245654333443311447814898630432221-02-333445443232024660677620255167765322100 Q gi|254781097|r 163 NPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGAKV-FS-DIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDEL 240 (369) Q Consensus 163 ~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~-ln-~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~ 240 (369) T Consensus 113 ----~----------~~~~~~~~~~i~i~~ga~~~~K~wp~~~~~~l~~~l~~---~~~~ivl~g~~~e~~~~~~i~~~~ 175 (279) T cd03789 113 ----R----------GLLTDVVKPVVVLPPGASGPAKRWPAERFAALADRLLA---RGARVVLTGGPAERELAEEIAAAL 175 (279) T ss_pred ----C----------CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH---CCCEEEEECCHHHHHHHHHHHHHC T ss_conf ----0----------33114799989995898973457989999999999985---899599934866899999999967 Q ss_pred CCCCCCCCC-----CCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEE Q ss_conf 111134544-----445144430044899725420233345529604875 Q gi|254781097|r 241 GCKATLACF-----FKDIERYIVEANLLICRSGALTVSEIAVIGRPAILV 285 (369) Q Consensus 241 ~~~~~v~~f-----~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlI 285 (369) T Consensus 176 ~-~~~~~~l~g~~sl~el~~li~~a~l~I~~-DTg~~HlAaa~~~p~i~i 223 (279) T cd03789 176 G-GPRVVNLAGKTSLRELAALLARADLVVTN-DSGPMHLAAALGTPTVAL 223 (279) T ss_pred C-CCCEEECCCCCCHHHHHHHHHHCCEEEEC-CCHHHHHHHHCCCCEEEE T ss_conf 9-99758368999999999999846833756-877999999849998999 |
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.056 Score=33.31 Aligned_cols=210 Identities=13% Similarity=0.152 Sum_probs=102.0 Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEE-ECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCH Q ss_conf 7699987885256207999999999659839999-572376762444687516875256565331233211100012110 Q gi|254781097|r 5 NVILLVAGGTGGHVFPAVALSHELKNRGYAVYLI-TDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFI 83 (369) Q Consensus 5 ~~ili~~gGTGGHi~palala~~L~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (369) T Consensus 3 ~~ilvlG-GT~-D---ar~la~~L~~~~~~~~~ss~t~~g~~l~~~~~~----~~-~~G~l----------------~~e 56 (257) T COG2099 3 MRILLLG-GTS-D---ARALAKKLAAAPVDIILSSLTGYGAKLAEQIGP----VR-VGGFL----------------GAE 56 (257) T ss_pred CEEEEEE-CCH-H---HHHHHHHHHCCCCCEEEEECCCCCCCCHHCCCC----EE-ECCCC----------------CHH T ss_conf 3599982-638-9---999999862068617999703444241110588----66-52768----------------878 Q ss_pred HHHHHHHHCCCCEEEE-CCCCC---CHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE Q ss_conf 1355542034442431-26532---1024788862341101221532001567788999998741343222235566732 Q gi|254781097|r 84 ASLRLIKKLKPNVVVG-FGGYH---SISPLLAGMILRIPSMVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKII 159 (369) Q Consensus 84 ~~~~ii~~~kPDvVi~-tGGy~---s~P~~iaA~~l~iP~vihEqN~v~G~~nk~l~~~a~~v~~~~~~~~~~~~~~k~~ 159 (369) T Consensus 57 ~l~~~l~e~~i~llIDATHPyAa~iS~Na~~aake~gipy~r~eR---P~-------------------~~~~--gd~~~ 112 (257) T COG2099 57 GLAAFLREEGIDLLIDATHPYAARISQNAARAAKETGIPYLRLER---PP-------------------WAPN--GDNWI 112 (257) T ss_pred HHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEC---CC-------------------CCCC--CCCEE T ss_conf 999999974988899788757999989999999985996799877---75-------------------5457--99669 Q ss_pred EEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH Q ss_conf 53044432456543334433114478148986304322210233344544323202466067762025516776532210 Q gi|254781097|r 160 VTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDE 239 (369) Q Consensus 160 ~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ 239 (369) T Consensus 113 ~V~--------d~~ea~~~~~~~~--~rVflt~G~~~l~~--------f~~~~~~~--~~~~Rvl-p~--~~~-~~~~~~ 168 (257) T COG2099 113 EVA--------DIEEAAEAAKQLG--RRVFLTTGRQNLAH--------FVAADAHS--HVLARVL-PP--PDV-LAKCED 168 (257) T ss_pred EEC--------CHHHHHHHHHCCC--CCEEEECCCCCHHH--------HHCCCCCC--EEEEEEC-CC--HHH-HHHHHH T ss_conf 845--------8999999875047--73799507521598--------86375556--4999976-94--387-787776 Q ss_pred CC---CCCCCC--CCCCCCHHHH---HCCCEEEECCCCHH------HHHHHHHCCCEEEEECC Q ss_conf 01---111345--4444514443---00448997254202------33345529604875335 Q gi|254781097|r 240 LG---CKATLA--CFFKDIERYI---VEANLLICRSGALT------VSEIAVIGRPAILVPYP 288 (369) Q Consensus 240 ~~---~~~~v~--~f~~~m~~~~---~~aDlvIsraG~~T------i~E~~~~g~P~IlIP~p 288 (369) T Consensus 169 ~~~p~~~Iia~~GPfs~~~n~all~q~~id~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp 231 (257) T COG2099 169 LGVPPARIIAMRGPFSEEDNKALLEQYRIDVVVTKNSGGAGGTYEKIEAARELGIPVIMIERP 231 (257) T ss_pred CCCCHHHEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECC T ss_conf 199846689823886758899999984888999826776667389899999869938999467 |
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.048 Score=33.77 Aligned_cols=271 Identities=19% Similarity=0.221 Sum_probs=135.4 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHH Q ss_conf 69998788525620799999999965983999957237676244468751687525656533123321110001211013 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIAS 85 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 85 (369) T Consensus 8 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~g~~~~~~g~--~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~ 82 (393) T TIGR00215 8 TIALVAGELSGDLL-GGGLRRQLPEHYPNARFVGLGGPRLAAEGC--ELLYD--PEELGVLGLTEVLGRLGPLLKIRKEL 82 (393) T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHCCCCCEEECCCHHHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 23221200001467-889988645321220100023313454124--55520--35665543788887778888888899 Q ss_pred HHHHHHCCCCEEEECCCCCCHHHHHHHHHC----CCCCEEEC-CCCCCHHHHHH----HHHHHHHHHCCCCCCCC--CCC Q ss_conf 555420344424312653210247888623----41101221-53200156778----89999987413432222--355 Q gi|254781097|r 86 LRLIKKLKPNVVVGFGGYHSISPLLAGMIL----RIPSMVHE-QNVIMGKANRL----LSWGVQIIARGLVSSQK--KVL 154 (369) Q Consensus 86 ~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l----~iP~vihE-qN~v~G~~nk~----l~~~a~~v~~~~~~~~~--~~~ 154 (369) T Consensus 83 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~w~w~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 161 (393) T TIGR00215 83 VQLLKQAPPDLLVGID-APDFNLTLANELKKKDPGLKTLYYVSPSVWAWRPTKWRAKKLGKATDLLLAFLPFEKGFYDKK 161 (393) T ss_pred HHHHHHCCCEEEEECC-CCCCCCHHHHHHHHCCCCCCEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH T ss_conf 9875304630255403-467650123232200477514444333001025026788888887767765401034454420 Q ss_pred CCCCEEEECCCCHHHHHH-HHHH--HHHHCCCCC-CEEEEEECCCCCCC--HHHHHHHHHHHHHHHCCCCCEEEE-EECC Q ss_conf 667325304443245654-3334--433114478-14898630432221--023334454432320246606776-2025 Q gi|254781097|r 155 LRKIIVTGNPIRSSLIKM-KDIP--YQSSDLDQP-FHLLVFGGSQGAKV--FSDIVPKSIALIPEMQRKRLVIMQ-QVRE 227 (369) Q Consensus 155 ~~k~~~~G~PvR~~~~~~-~~~~--~~~~~~~~~-~~ILv~GGS~Ga~~--ln~~v~~~~~~l~~~~~~~~~v~~-~~g~ 227 (369) T Consensus 162 ~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 240 (393) T TIGR00215 162 GLPCRFVGHPLLDAIPLEKPDRGSAREKLGIDHNGETLALLPGSRGSELEYLLPLFLKAAQLLEE-QLPDLKLLLPLPNK 240 (393) T ss_pred CCCEEECCCHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH-HCCCCEEEEEEHHH T ss_conf 67502204224544321033123345651688666368883064125788876887668888764-14752122220001 Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCCCCHH-HHHCCCEEEECCCCHHHHHHHHHCCCEEE Q ss_conf 5167765322100111134544445144-43004489972542023334552960487 Q gi|254781097|r 228 DDKEKVQKQYDELGCKATLACFFKDIER-YIVEANLLICRSGALTVSEIAVIGRPAIL 284 (369) Q Consensus 228 ~~~~~~~~~~~~~~~~~~v~~f~~~m~~-~~~~aDlvIsraG~~Ti~E~~~~g~P~Il 284 (369) T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~p~~~ 297 (393) T TIGR00215 241 KRGLQFERLKAEFGPDLTLHLLDGDARLTALVAADLALLASGTAAL-EAALLGTPFVL 297 (393) T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHH-HHHHHCCCHHH T ss_conf 2213578888863466313542242023456554345542122456-67663374110 |
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described . This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site . The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process. |
| >pfam02571 CbiJ Precorrin-6x reductase CbiJ/CobK | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.18 Score=29.80 Aligned_cols=209 Identities=15% Similarity=0.189 Sum_probs=96.5 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHH Q ss_conf 69998788525620799999999965983999957237676244468751687525656533123321110001211013 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIAS 85 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 85 (369) T Consensus 2 ~IlilgG-T~-e---~r~la~~L~~~g~-~~v~t~~~~~~~~~~---~~~~~~~~G~l~~----------------~~~m 56 (246) T pfam02571 2 RILILGG-TT-E---ARALAAALAAAGV-VSVVTSLAGRTAAPR---LPPLPVRVGGFGG----------------ADGL 56 (246) T ss_pred EEEEEEE-CH-H---HHHHHHHHHHCCC-EEEEECCCHHHCCCC---CCCCCEEECCCCC----------------HHHH T ss_conf 6999973-68-9---9999999985698-799984755443766---7885089799899----------------9999 Q ss_pred HHHHHHCCCCEEE-ECCCCCC---HHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE Q ss_conf 5554203444243-1265321---02478886234110122153200156778899999874134322223556673253 Q gi|254781097|r 86 LRLIKKLKPNVVV-GFGGYHS---ISPLLAGMILRIPSMVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVT 161 (369) Q Consensus 86 ~~ii~~~kPDvVi-~tGGy~s---~P~~iaA~~l~iP~vihEqN~v~G~~nk~l~~~a~~v~~~~~~~~~~~~~~k~~~~ 161 (369) T Consensus 57 ~~~i~~~~i~~vIDATHPfA~~is~na~~a~~~~~ipyiR~eRp~-----------------------~~~~~~d~~~~v 113 (246) T pfam02571 57 AAYLREEGIDAVIDATHPFAAQISRNAAAACKELGVPLLRLERPA-----------------------WQPGPGDRWIYV 113 (246) T ss_pred HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCC-----------------------CCCCCCCCEEEE T ss_conf 999997799799989999689999999999998599689960621-----------------------267889877997 Q ss_pred ECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCC Q ss_conf 04443245654333443311447814898630432221023334454432320246606776202551677653221001 Q gi|254781097|r 162 GNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELG 241 (369) Q Consensus 162 G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~ 241 (369) T Consensus 114 ~--------s~~ea~~~l~~~-~~~~VllttG~k~---L~~f-----~~~~~-~~~~~RvL---p~~~~---~~g~~--~ 167 (246) T pfam02571 114 D--------SLAEAAAALAEL-PGKRVFLTTGRQE---LAAF-----AALPQ-HRLLARVL---PPPEA---ALGFP--N 167 (246) T ss_pred C--------CHHHHHHHHHHC-CCCEEEEEECCCC---HHHH-----HCCCC-CEEEEEEC---CCCCC---CCCCC--H T ss_conf 9--------999999987646-7865898405023---8998-----53857-75999966---88654---47998--0 Q ss_pred CCCC--CCCCCCCCHHH-H--HCCCEEEECCCCHH-----HHHHHHHCCCEEEEECC Q ss_conf 1113--45444451444-3--00448997254202-----33345529604875335 Q gi|254781097|r 242 CKAT--LACFFKDIERY-I--VEANLLICRSGALT-----VSEIAVIGRPAILVPYP 288 (369) Q Consensus 242 ~~~~--v~~f~~~m~~~-~--~~aDlvIsraG~~T-----i~E~~~~g~P~IlIP~p 288 (369) T Consensus 168 ~~iIa~~gPfs~e~n~al~~~~~i~~lVtK~SG~~g~~~Ki~AA~~lgi~vivI~RP 224 (246) T pfam02571 168 AEIIAARGPFSLELERALLRRHGIDVLVTKNSGGAGTYAKLAAARELGLPVIMIKRP 224 (246) T ss_pred HCEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC T ss_conf 018990499998999999997099999992888650699999999849929999589 |
This family consists of Precorrin-6x reductase EC:1.3.1.54. This enzyme catalyses the reaction: precorrin-6Y + NADP(+) <= precorrin-6X + NADPH. CbiJ and CobK both catalyse the reduction of macocycle in the colbalmin biosynthesis pathway. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.3e-14 Score=116.88 Aligned_cols=260 Identities=13% Similarity=0.110 Sum_probs=153.5 Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEE--ECCCCCCH----H--HHH-------HHHHHHHHHHCCC Q ss_conf 1013555420344424312653210247888623411012--21532001----5--677-------8899999874134 Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMV--HEQNVIMG----K--ANR-------LLSWGVQIIARGL 146 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vi--hEqN~v~G----~--~nk-------~l~~~a~~v~~~~ 146 (369) T Consensus 71 ~~~l~r~lr~~~pDlIHaH~~~~g~~~~~~a~~~~iP~V~T~Hg~d~~~~~~~~~~~~~~~~~~~~~~l~~~a~~iI~vS 150 (367) T cd05844 71 APQLRRLLRRHRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVS 150 (367) T ss_pred CHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCEEEECC T ss_conf 48999999976999999768606899999999969999999813641014101001104678999999997269999699 Q ss_pred CCCC-----CCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCE Q ss_conf 3222-----23556673253044432456543334433114478148986304322-21023334454432320246606 Q gi|254781097|r 147 VSSQ-----KKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLV 220 (369) Q Consensus 147 ~~~~-----~~~~~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~ 220 (369) T Consensus 151 ~~~~~~l~~~G~~~~ki~vi~~GvD~~~f~~~~~------~~~~~~il~vG-Rl~~~KG~~-~li~A~~~l~~~-~p~~~ 221 (367) T cd05844 151 QFIRDRLLALGFPPEKVHVHPIGVDTAKFTPATP------ARRPPRILFVG-RFVEKKGPL-LLLEAFARLARR-VPEVR 221 (367) T ss_pred HHHHHHHHHCCCCHHHEEEECCCCCHHHCCCCCC------CCCCCEEEEEE-CCCCCCCHH-HHHHHHHHHHHH-CCCEE T ss_conf 9999999985989789999778636764699987------77896899993-573000769-999999997966-86979 Q ss_pred EEEEECCCCHHHHHHHHHHCC--CCCCCCCCC--CCCHHHHHCCCEEEECC---------C-CHHHHHHHHHCCCEEEEE Q ss_conf 776202551677653221001--111345444--45144430044899725---------4-202333455296048753 Q gi|254781097|r 221 IMQQVREDDKEKVQKQYDELG--CKATLACFF--KDIERYIVEANLLICRS---------G-ALTVSEIAVIGRPAILVP 286 (369) Q Consensus 221 v~~~~g~~~~~~~~~~~~~~~--~~~~v~~f~--~~m~~~~~~aDlvIsra---------G-~~Ti~E~~~~g~P~IlIP 286 (369) T Consensus 222 l~ivG~Gp~~~~l~~~~~~l~l~~~V~f~G~~~~~~v~~~l~~adv~v~PS~~~~~g~~Eg~~~~~lEAmA~G~PVVat~ 301 (367) T cd05844 222 LVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATR 301 (367) T ss_pred EEEEECCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEC T ss_conf 99998883789999999970987637877889818899999857879960020377885676379999998499789927 Q ss_pred CCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC-HHHHHHHHHHHH Q ss_conf 35524898999899999889889980001998999999999861899999999999852783-279999999999 Q gi|254781097|r 287 YPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKP-QAVLMLSDLVEK 360 (369) Q Consensus 287 ~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~-~aa~~i~~~i~~ 360 (369) T Consensus 302 ~g--------gi~e~V~~g~~G~lv~~~d--~~~La~ai~~Ll~d~~~~~~m~~~gr~~v~~~f~~~~~~~~Le~ 366 (367) T cd05844 302 HG--------GIPEAVEDGETGLLVPEGD--VAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367) T ss_pred CC--------CCHHHHCCCCCEEEECCCC--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC T ss_conf 99--------8687720799689978999--99999999999849999999999999999981999999999833 |
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >pfam02350 Epimerase_2 UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.7e-12 Score=106.84 Aligned_cols=262 Identities=18% Similarity=0.253 Sum_probs=160.9 Q ss_pred CHHHHHHHHHCCCCEEEECCC-CCCHHHHHHHHHCCCCCEEECC-----CCCCHH---HHH-HHHHHHHHHHCCCCCCCC Q ss_conf 101355542034442431265-3210247888623411012215-----320015---677-889999987413432222 Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGG-YHSISPLLAGMILRIPSMVHEQ-----NVIMGK---ANR-LLSWGVQIIARGLVSSQK 151 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGG-y~s~P~~iaA~~l~iP~vihEq-----N~v~G~---~nk-~l~~~a~~v~~~~~~~~~ 151 (369) T Consensus 56 i~~~~~~l~~~~PD~vlv~GDr~e~la~aiaa~~~~ipi~HiegG~RS~d~t~g~~de~~R~~isklS~~hf~~t~~~~~ 135 (346) T pfam02350 56 LIGLEDVLEEEKPDLVLVLGDTNETLAGALAAFYLRIPVAHVEAGLRSFDLTEGMPEEINRHLIDKLSDLHFAPTEEARE 135 (346) T ss_pred HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCEEECCCHHHHH T ss_conf 99999999982999999968971588999999981984899526874455679993054311466541377246499999 Q ss_pred C-----CCCCCCEEEECCCCHHHHHHHHHHHH------HHCCCCCCEEEEEEC---CCCC-CCHHHHHHHHHHHHHHHCC Q ss_conf 3-----55667325304443245654333443------311447814898630---4322-2102333445443232024 Q gi|254781097|r 152 K-----VLLRKIIVTGNPIRSSLIKMKDIPYQ------SSDLDQPFHLLVFGG---SQGA-KVFSDIVPKSIALIPEMQR 216 (369) Q Consensus 152 ~-----~~~~k~~~~G~PvR~~~~~~~~~~~~------~~~~~~~~~ILv~GG---S~Ga-~~ln~~v~~~~~~l~~~~~ 216 (369) T Consensus 136 ~L~~~G~~~~~If~vG~~~iD~i~~~~~~~~~~~~~~~~~~~~~~~~iLvt~Hr~en~~~~~~~-~~i~~~l~~l~~~~~ 214 (346) T pfam02350 136 NLLQEGEPPERIFVTGNTVIDALLLSREEIEESLEISGILADLGKRYILVTFHRRENEDDPERL-EQILEALKALAERPD 214 (346) T ss_pred HHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHH-HHHHHHHHHHHHCCC T ss_conf 9998199947289979719999999998731015566640345687799996775344764489-999999999983568 Q ss_pred CCCEEEEEECC--CCHHHHHHHHHHCCCCCCCCCC--CCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCC Q ss_conf 66067762025--5167765322100111134544--4451444300448997254202333455296048753355248 Q gi|254781097|r 217 KRLVIMQQVRE--DDKEKVQKQYDELGCKATLACF--FKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVD 292 (369) Q Consensus 217 ~~~~v~~~~g~--~~~~~~~~~~~~~~~~~~v~~f--~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~ 292 (369) T Consensus 215 --~~~i~~~~n~d~~~~~i~~~l~~~-~ni~~~~~l~~~~fl~ll~~s~~vigdSs~~~-~Ea~~l~~P~iniR--~~-g 287 (346) T pfam02350 215 --VPVVFPVHNNPRTRKRINELLEEL-PNIRLIEPLGYLDFLSLLKNADLVITDSGGIQ-EEAPSLGKPVLNLR--DT-T 287 (346) T ss_pred --CCEEEEECCCCHHHHHHHHHHHCC-CCEEEECCCCHHHHHHHHHHCCEEEECCCCHH-HHHHHHCCCEEEEC--CC-C T ss_conf --609998379920778999998347-98799656899999999985188983686216-66665089689827--88-8 Q ss_pred CHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH Q ss_conf 9899989999988988998000199899999999986189999999999985278327999999999 Q gi|254781097|r 293 QDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVE 359 (369) Q Consensus 293 ~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~ 359 (369) T Consensus 288 eRqe--gr---~~g~nvlv~---~~~~~I~~ai~~~l~~~~~~~~~~~~~npyGdG~as~rI~~il~ 346 (346) T pfam02350 288 ERPE--GR---EAGTNVLVG---TDKEAILAAIEKLLDDEEEYEKMSNAVNPYGDGNASERIVDILK 346 (346) T ss_pred CCHH--HH---HHCEEEEEC---CCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHC T ss_conf 8875--69---538469978---99999999999997196777641247898989869999999969 |
This family consists of UDP-N-acetylglucosamine 2-epimerases EC:5.1.3.14 this enzyme catalyses the production of UDP-ManNAc from UDP-GlcNAc. Note that some of the enzymes is this family are bifunctional, in this instance Pfam matches only the N-terminal half of the protein suggesting that the additional C-terminal part (when compared to mono-functional members of this family) is responsible for the UPD-N-acetylmannosamine kinase activity of these enzymes. This hypothesis is further supported by the assumption that the C-terminal part of rat bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase is the kinase domain. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.4e-09 Score=86.43 Aligned_cols=241 Identities=17% Similarity=0.176 Sum_probs=136.4 Q ss_pred CCCCCHHHHHHHHHCCCCCEEECCCCCC--------------H-----------HHHHHHHHHHHHHHCCCCCCC----- Q ss_conf 6532102478886234110122153200--------------1-----------567788999998741343222----- Q gi|254781097|r 101 GGYHSISPLLAGMILRIPSMVHEQNVIM--------------G-----------KANRLLSWGVQIIARGLVSSQ----- 150 (369) Q Consensus 101 GGy~s~P~~iaA~~l~iP~vihEqN~v~--------------G-----------~~nk~l~~~a~~v~~~~~~~~----- 150 (369) T Consensus 182 tGyAgllg~l~~~~~g~P~llTEHGIYtRER~i~l~~a~w~~~~~r~~wi~ff~~l~~~~Y~~Ad~I~~l~~~nr~~qi~ 261 (475) T cd03813 182 TGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTLYEGNRERQIE 261 (475) T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHH T ss_conf 53778999999887589879850672289999888647543589999999999999999998517000134244899998 Q ss_pred CCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC-C Q ss_conf 235566732530444324565433344331144781489863043222102333445443232024660677620255-1 Q gi|254781097|r 151 KKVLLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVRED-D 229 (369) Q Consensus 151 ~~~~~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~-~ 229 (369) T Consensus 262 ~Ga~~~k~~vIpNGId~~~F~~--~~~~-~~~~~~~~v~~vgRv~p~Kdi~-tlI~A~~~v~~~-~p~~rl~I~Gp~d~~ 336 (475) T cd03813 262 DGADPEKIRVIPNGIDPERFAP--ARRA-RPEKEPPVVGLIGRVVPIKDIK-TFIRAAAIVRKK-IPDAEGWVIGPTDED 336 (475) T ss_pred HCCCHHHCEECCCCCCHHHCCC--CCCC-CCCCCCCEEEEEEECCCCCCHH-HHHHHHHHHHHH-CCCEEEEEECCCCCC T ss_conf 1989999441179832988488--7656-6678998899997011166999-999999999986-898399997799888 Q ss_pred H---HHHHHHHHHC--CCCCCCCCCCCCCHHHHHCCCEEEECC----CCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH Q ss_conf 6---7765322100--111134544445144430044899725----420233345529604875335524898999899 Q gi|254781097|r 230 K---EKVQKQYDEL--GCKATLACFFKDIERYIVEANLLICRS----GALTVSEIAVIGRPAILVPYPHSVDQDQLHNAY 300 (369) Q Consensus 230 ~---~~~~~~~~~~--~~~~~v~~f~~~m~~~~~~aDlvIsra----G~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~ 300 (369) T Consensus 337 ~~y~~ec~~lv~~lgL~~~V~F~G~~-dv~~~l~~~Dv~vl~S~~Eg~plvllEAmA~G~PvVaTd----VGg~----~e 407 (475) T cd03813 337 PEYAEECRELVESLGLEDNVKFTGFQ-NVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATD----VGSC----RE 407 (475) T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCC-CHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCCCEEECC----CCCC----HH T ss_conf 58999999999982998727983878-989999857999965733467579999997699889726----9981----88 Q ss_pred HHHH------CCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC-HHHHHHHHH Q ss_conf 9998------89889980001998999999999861899999999999852783-279999999 Q gi|254781097|r 301 YLQE------GGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKP-QAVLMLSDL 357 (369) Q Consensus 301 ~l~~------~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~-~aa~~i~~~ 357 (369) T Consensus 408 ~v~~~~~~~~G~~G~lvp~~--d~~~LA~ai~~Ll~d~~~r~~~g~~ar~rv~~~f~~e~m~~~ 469 (475) T cd03813 408 LIEGADDEALGPAGEVVPPA--DPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDS 469 (475) T ss_pred HHCCCCCCCCCCCEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH T ss_conf 75386656778854896999--999999999999739999999999999999996899999999 |
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK10017 putative pyruvyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=6.7e-05 Score=53.78 Aligned_cols=258 Identities=10% Similarity=0.107 Sum_probs=134.1 Q ss_pred CCCEEEECCC-CC-------CHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHH-------CC----CCCCC-CC Q ss_conf 4442431265-32-------102478886234110122153200156778899999874-------13----43222-23 Q gi|254781097|r 93 KPNVVVGFGG-YH-------SISPLLAGMILRIPSMVHEQNVIMGKANRLLSWGVQIIA-------RG----LVSSQ-KK 152 (369) Q Consensus 93 kPDvVi~tGG-y~-------s~P~~iaA~~l~iP~vihEqN~v~G~~nk~l~~~a~~v~-------~~----~~~~~-~~ 152 (369) T Consensus 117 ~~D~vIs~GGs~~~D~yg~~~~~~~L~a~l~kKpv~~~aQgIGP-~~~~~~~~l~~~vl~~~d~ItvRD~~S~~~L~~lG 195 (426) T PRK10017 117 GYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP-FQDEQFNQLANYVFGHCDALILRESVSLDLMKRSN 195 (426) T ss_pred HCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCC-CCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCC T ss_conf 54789971776201476852168999999739968999044688-08788999999998419789976587899999859 Q ss_pred CCCCCCEEEECCCCHHHH-HH------HH-HHHHHHCC-CCCCEEEEE----ECC---CCC--CCHHHHHHHHHHHHHHH Q ss_conf 556673253044432456-54------33-34433114-478148986----304---322--21023334454432320 Q gi|254781097|r 153 VLLRKIIVTGNPIRSSLI-KM------KD-IPYQSSDL-DQPFHLLVF----GGS---QGA--KVFSDIVPKSIALIPEM 214 (369) Q Consensus 153 ~~~~k~~~~G~PvR~~~~-~~------~~-~~~~~~~~-~~~~~ILv~----GGS---~Ga--~~ln~~v~~~~~~l~~~ 214 (369) T Consensus 196 v~~~~i~~taDpA---F~l~~~~~~~~~~~~~~~~l~~~~~~~~VgisVr~~~~~~~~~~~~~~~y~~a~a~~~d~l~~~ 272 (426) T PRK10017 196 ITTAKVEHGVDTA---WLVDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDE 272 (426) T ss_pred CCCCCEEEECCCC---EECCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHC T ss_conf 9978628945821---1025654332212355641365666877999970366301124410899999999999999977 Q ss_pred CCCCCEEEEEECC-----CCHHHHHHHHHHC--CCCCCCCCC---CCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEE Q ss_conf 2466067762025-----5167765322100--111134544---44514443004489972542023334552960487 Q gi|254781097|r 215 QRKRLVIMQQVRE-----DDKEKVQKQYDEL--GCKATLACF---FKDIERYIVEANLLICRSGALTVSEIAVIGRPAIL 284 (369) Q Consensus 215 ~~~~~~v~~~~g~-----~~~~~~~~~~~~~--~~~~~v~~f---~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~Il 284 (369) T Consensus 273 G~~Vv~lp~~~~i~~~~~dD~~~~~~i~~~m~~~~~~~il~~~~~~~E~~~ii~~~dl~IG~RLHslI-fA~~~gvP~i~ 351 (426) T PRK10017 273 GYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAI-ISMNFATPAIA 351 (426) T ss_pred CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHH-HHHHCCCCEEE T ss_conf 98799960566877778025999999999726876369838999989999999739229988899999-99975999698 Q ss_pred EECCCCCCCHHHHHHHHHHHCCCE-EEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH Q ss_conf 533552489899989999988988-998000199899999999986189999999999985278327999999999999 Q gi|254781097|r 285 VPYPHSVDQDQLHNAYYLQEGGGA-KVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEKLA 362 (369) Q Consensus 285 IP~p~a~~~hQ~~NA~~l~~~G~a-~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~la 362 (369) T Consensus 352 IsY-------d~K~~g~~~~lGl~~~~~di~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (426) T PRK10017 352 INY-------EHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNARLAEAVSRERQTGMQMVQSVLERIG 423 (426) T ss_pred EEE-------CHHHHHHHHHCCCCHHEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 402-------287899999759930030377669278999999999769999999999999999999999999999852 |
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.5e-12 Score=104.66 Aligned_cols=192 Identities=17% Similarity=0.170 Sum_probs=121.4 Q ss_pred CCCCCEEEECCCCHHHHHHHH--HHHHHHCCCCCCEEEEEECCCCC----CCHHHHHHHHHHHHHHHCCCCCEEEEEECC Q ss_conf 566732530444324565433--34433114478148986304322----210233344544323202466067762025 Q gi|254781097|r 154 LLRKIIVTGNPIRSSLIKMKD--IPYQSSDLDQPFHLLVFGGSQGA----KVFSDIVPKSIALIPEMQRKRLVIMQQVRE 227 (369) Q Consensus 154 ~~~k~~~~G~PvR~~~~~~~~--~~~~~~~~~~~~~ILv~GGS~Ga----~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~ 227 (369) T Consensus 157 ~~~ki~vI~Ngid~~~f~p~~~~~~r~~~~~~~~~~vi~~~~-~~~~~~~Kg~-~~li~A~~~l~~~~~~~~~lvi~-G~ 233 (365) T cd03825 157 KGIPIEVIPNGIDTTIFRPRDKREARKRLGLPADKKIILFGA-VGGTDPRKGF-DELIEALKRLAERWKDDIELVVF-GA 233 (365) T ss_pred CCCCEEEECCCCCHHHCCCCCHHHHHHHHCCCCCCCEEEEEE-ECCCCCCCCH-HHHHHHHHHHHHCCCCCEEEEEE-CC T ss_conf 989789989973646449868899999839798885899953-0015643247-99999999876506898899993-79 Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCCC---CHHHHHCCCEEEECC----CCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH Q ss_conf 5167765322100111134544445---144430044899725----420233345529604875335524898999899 Q gi|254781097|r 228 DDKEKVQKQYDELGCKATLACFFKD---IERYIVEANLLICRS----GALTVSEIAVIGRPAILVPYPHSVDQDQLHNAY 300 (369) Q Consensus 228 ~~~~~~~~~~~~~~~~~~v~~f~~~---m~~~~~~aDlvIsra----G~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~ 300 (369) T Consensus 234 ~~~~-~~---~~l~~~v~flG~~~~~~~l~~~~~~aDi~v~pS~~Egfg~v~lEAma~G~PVVasd----~gg----~~e 301 (365) T cd03825 234 SDPE-IP---PDLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFD----VGG----IPD 301 (365) T ss_pred CCHH-HH---HHCCCCEEEECCCCCHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHCCCCEEECC----CCC----HHH T ss_conf 8588-89---66899799926879989999999727299516776888599999997199899738----998----599 Q ss_pred HHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHH Q ss_conf 99988988998000199899999999986189999999999985278-327999999999999 Q gi|254781097|r 301 YLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGK-PQAVLMLSDLVEKLA 362 (369) Q Consensus 301 ~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~-~~aa~~i~~~i~~la 362 (369) T Consensus 302 iv~~~~~G~lv~~~d--~~~la~ai~~ll~d~~~~~~~~~~ar~~~~~~fs~~~~~~~~~~lY 362 (365) T cd03825 302 IVDHGVTGYLAKPGD--PEDLAEGIEWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLY 362 (365) T ss_pred HHCCCCCEEEECCCC--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH T ss_conf 960798279979999--9999999999986999999999999999998689999999999998 |
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >KOG1192 consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.4e-11 Score=98.82 Aligned_cols=184 Identities=20% Similarity=0.196 Sum_probs=115.5 Q ss_pred CCCCEEEECCCCHHHHHHHH-HHHHHHC-CC--CCCEEEEEECCCCC-CCHHHHHHHHH-HHHHHHCCCCCEEEEEECCC Q ss_conf 66732530444324565433-3443311-44--78148986304322-21023334454-43232024660677620255 Q gi|254781097|r 155 LRKIIVTGNPIRSSLIKMKD-IPYQSSD-LD--QPFHLLVFGGSQGA-KVFSDIVPKSI-ALIPEMQRKRLVIMQQVRED 228 (369) Q Consensus 155 ~~k~~~~G~PvR~~~~~~~~-~~~~~~~-~~--~~~~ILv~GGS~Ga-~~ln~~v~~~~-~~l~~~~~~~~~v~~~~g~~ 228 (369) T Consensus 244 ~~~v~~IG-~l~~~~~~~~~~~~~~wl~~~~~~~~~vvyvSfGS~~~s~~lp~~~~~~l~~~l~~-~-~~~~FiW~~~~~ 320 (496) T KOG1192 244 LPKVIPIG-PLHVKDSKQKSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALES-L-QGVTFLWKYRPD 320 (496) T ss_pred CCCEEEEC-CEEECCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHC-C-CCCCEEEEEECC T ss_conf 79879988-65565655676437889962665679889998888766255999999999999854-7-896479999368 Q ss_pred CHHHHHHHHHH-CCCCCCCCCCCCCCHHH--HHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHC Q ss_conf 16776532210-01111345444451444--3004489972542023334552960487533552489899989999988 Q gi|254781097|r 229 DKEKVQKQYDE-LGCKATLACFFKDIERY--IVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEG 305 (369) Q Consensus 229 ~~~~~~~~~~~-~~~~~~v~~f~~~m~~~--~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~ 305 (369) T Consensus 321 ~~~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf----~DQ~~Na~~i~~~ 396 (496) T KOG1192 321 DSIYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLF----GDQPLNARLLVRH 396 (496) T ss_pred CCCHHHHCCCCCCCCCEEECCCCCCHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCEECCCCC----CCCHHHHHHHHHC T ss_conf 520222244434676184126658533535687417088518688899998659984347863----3538899999972 Q ss_pred CCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC Q ss_conf 9889980001998999999999861899999999999852 Q gi|254781097|r 306 GGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMK 345 (369) Q Consensus 306 G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~ 345 (369) T Consensus 397 g~~~v~~~~~~~~~~~~~~~~~il~~~~y~~~~~~l~~~~ 436 (496) T KOG1192 397 GGGGVLDKRDLVSEELLEAIKEILENEEYKEAAKRLSEIL 436 (496) T ss_pred CCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH T ss_conf 7548996212331256777776507699999999999985 |
|
| >pfam04007 DUF354 Protein of unknown function (DUF354) | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.4e-13 Score=114.54 Aligned_cols=295 Identities=18% Similarity=0.159 Sum_probs=161.2 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH-HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHH Q ss_conf 69998788525620799999999965983999957237-67624446875168752565653312332111000121101 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRA-RSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIA 84 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (369) T Consensus 2 kIwiDI~-~p~hvhfFk~iI~eL~k~GheV~iTaR~~~~~~~LL~~y~i~~~~i--G~-~g~s~~~Kl~~~---~~R~~~ 74 (335) T pfam04007 2 KVWIDIT-NAPHVHFFKPIISELEKEGYEVLLTCRKFGELPELLRSLGFQVKSI--GK-HGATLIKKLLSS---AERVYL 74 (335) T ss_pred EEEEECC-CCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCEEEE--CC-CCCCHHHHHHHH---HHHHHH T ss_conf 3999789-9508888999999998689889999961351999999769976997--58-888889999999---999999 Q ss_pred HHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCC--CCCC-CCC-CCCCC-E Q ss_conf 35554203444243126532102478886234110122153200156778899999874134--3222-235-56673-2 Q gi|254781097|r 85 SLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVIMGKANRLLSWGVQIIARGL--VSSQ-KKV-LLRKI-I 159 (369) Q Consensus 85 ~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~v~G~~nk~l~~~a~~v~~~~--~~~~-~~~-~~~k~-~ 159 (369) T Consensus 75 L~~~~~~~~PDv~is~~S---~~a~~va~~LgipsI~f~Dteha~~~~~Lt~Pf~~~i~~P~~~~~~~~~~~G~~~~i~~ 151 (335) T pfam04007 75 LTKLIPEKKPDVAIMKNS---MELPRVAFGLRIPSIIVLDNEHALAANKLTFPLADYILVPEIIDDEFLRFFGADNRIRT 151 (335) T ss_pred HHHHHHHHCCCEEEECCC---HHHHHHHHHCCCCEEEEECCHHHCCCCEEEEECCCEEECCCCCCHHHHHHHCCCCCEEE T ss_conf 999988629978994488---01999998829987999477554123302312386888124467789986087785676 Q ss_pred EEECC----CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH---HHHHHHHHHHHHHCCCCCEEEEEECCCCHHH Q ss_conf 53044----4324565433344331144781489863043222102---3334454432320246606776202551677 Q gi|254781097|r 160 VTGNP----IRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGAKVFS---DIVPKSIALIPEMQRKRLVIMQQVREDDKEK 232 (369) Q Consensus 160 ~~G~P----vR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~ln---~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~ 232 (369) T Consensus 152 y~g~~E~a~l~-~F-~Pd~~vl~~lgl~~~~yIvvR~~~~~A~y~~g~~~i~~~ii~~l~~~~~-~iv~~--pr~~~q~~ 226 (335) T pfam04007 152 YPGIKEIANIS-DY-VPDPEILKKLGLEFEEYIVMRPEPLASSYVNGHESILPEIIEMLTKEGV-NIIYF--PRNKEQRE 226 (335) T ss_pred ECCCCEEEECC-CC-CCCHHHHHHCCCCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHHHCCC-CEEEE--CCCCHHHH T ss_conf 66844143216-66-8986578764998798899961645560011442159999999987598-19997--58703667 Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEE Q ss_conf 65322100111134544445144430044899725420233345529604875335524898999899999889889980 Q gi|254781097|r 233 VQKQYDELGCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVIT 312 (369) Q Consensus 233 ~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~ 312 (369) T Consensus 227 ---~~~~--~~v~i~~~~vd~~~Lly~adl~Ig-~GgTMa~EAAlLGtPaIs~-~p~~~-~~---vd~~l~~~gl~~~~~ 295 (335) T pfam04007 227 ---IFRG--FDVIIPKKPVDTLSLLYYSDLVIG-AGGTMNREAALLGTPAVSC-YPGKL-LA---VDKYLIEKGEMYHST 295 (335) T ss_pred ---HHCC--CCEECCCCCCCHHHHHHHCCEEEC-CCHHHHHHHHHHCCCEEEE-CCCCC-CH---HHHHHHHCCCEEEEC T ss_conf ---7504--770367888777888865468972-7568999999828987984-38852-13---679998679879618 Q ss_pred HHCCCHHHHHHHHHHHHC Q ss_conf 001998999999999861 Q gi|254781097|r 313 ENFLSPERLAEELCSAMK 330 (369) Q Consensus 313 ~~~~~~~~l~~~i~~ll~ 330 (369) T Consensus 296 ----d~~~i~~~v~~~~~ 309 (335) T pfam04007 296 ----DPREIVNYVISNLK 309 (335) T ss_pred ----CHHHHHHHHHHHHH T ss_conf ----98999999999860 |
Members of this family are around 350 amino acids in length. They are found in archaebacteria and have no known function. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00076 Score=46.39 Aligned_cols=296 Identities=12% Similarity=0.090 Sum_probs=123.7 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCE--EEEEECHHHHHHHCCCCCCCEEEEECCCCCC--CCHHHHHHHHHHCCCC Q ss_conf 69998788525620799999999965983--9999572376762444687516875256565--3312332111000121 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRGYA--VYLITDRRARSFITDFPADSIYEIVSSQVRF--SNPFVFWNSLVILWKA 81 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~ 81 (369) T Consensus 2 rILiIr~~~lGDvilttP~l~~Lr~~~P~a~I~~lv~~~~~~l~~~~P~id--~vi~~~~~~~~k~~~~~~-----~~~~ 74 (322) T PRK10964 2 RVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQIPSWHSAVD--RVIPVAIRRWRKAWFSAP-----IKAE 74 (322) T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCCC--EEEECCCCHHHHCCCCHH-----HHHH T ss_conf 799991675689998999999999988998899997725788751098625--887424201221223115-----7999 Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHC-CCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCC-CCC---CCCCC Q ss_conf 1013555420344424312653210247888623-411012215320015677889999987413432-222---35566 Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGYHSISPLLAGMIL-RIPSMVHEQNVIMGKANRLLSWGVQIIARGLVS-SQK---KVLLR 156 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l-~iP~vihEqN~v~G~~nk~l~~~a~~v~~~~~~-~~~---~~~~~ 156 (369) T Consensus 75 ~~~~~~~lr~~~yD~vidlq~~~r-sa~l~~~~~~~~r~g~~~~~~r~~~~~-~~~~~--~~~~~~~~h~v~r~~~l~-- 148 (322) T PRK10964 75 RKAFRRALQAEQYDAVIDAQGLVK-SAALVTRLAHGVKHGMDWQSAREPLAS-LFYNR--KHHIAKQQHAVERTRELF-- 148 (322) T ss_pred HHHHHHHHHHCCCCEEEECCCCHH-HHHHHHHHCCCCEECCCCCCCCCCHHH-HHCCC--CCCCCCCCCHHHHHHHHH-- T ss_conf 999999987458979998853177-899999863686104664334440145-43035--306873103999999999-- Q ss_pred CCEEEECCCCH---HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH-HHHHHHHHHHHHHCCCCCEEEEEEC-CCCHH Q ss_conf 73253044432---4565433344331144781489863043222102-3334454432320246606776202-55167 Q gi|254781097|r 157 KIIVTGNPIRS---SLIKMKDIPYQSSDLDQPFHLLVFGGSQGAKVFS-DIVPKSIALIPEMQRKRLVIMQQVR-EDDKE 231 (369) Q Consensus 157 k~~~~G~PvR~---~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~ln-~~v~~~~~~l~~~~~~~~~v~~~~g-~~~~~ 231 (369) T Consensus 149 -~~~lg~~~p~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~s~~~K~Wp~e~f~~La~~L~~---~g~~v~l~~G~~~e~~ 224 (322) T PRK10964 149 -AKSLGYSKPQTQGDYAIAQHFLTNLPADAGPYLVFLHATTRDDKHWPEAHWRELIGLLAD---SGLRIKLPWGAPHEEA 224 (322) T ss_pred -HHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH---CCCEEEEECCCHHHHH T ss_conf -997499898750225665998741212569849997378741258998999999999996---7997999478989999 Q ss_pred HHHHHHHHCCCCCCCCCC--CCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEE--E---C---CCCCCCHHHHHHHH Q ss_conf 765322100111134544--445144430044899725420233345529604875--3---3---55248989998999 Q gi|254781097|r 232 KVQKQYDELGCKATLACF--FKDIERYIVEANLLICRSGALTVSEIAVIGRPAILV--P---Y---PHSVDQDQLHNAYY 301 (369) Q Consensus 232 ~~~~~~~~~~~~~~v~~f--~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlI--P---~---p~a~~~hQ~~NA~~ 301 (369) T Consensus 225 ~~~~i~~~~-~~v~~~g~~sL~elaall~~a~l~I~n-DSG~mHlAaAlg~P~v~LFGpT~P~~~gP~g--~~~----~~ 296 (322) T PRK10964 225 RAKRLAEGF-DYVEVLPKMSLEEVARVLAGAKAVVSV-DTGLSHLTAALDRPNITLYGPTDPGLIGGYG--KNQ----HA 296 (322) T ss_pred HHHHHHHCC-CCCEECCCCCHHHHHHHHHHCCEEEEC-CCHHHHHHHHCCCCEEEEECCCCCCCCCCCC--CCC----EE T ss_conf 999998069-961245899999999999709999966-9759999998399989998889940307888--882----48 Q ss_pred HHHCCCEEEEEHHCCCHHHHHHHHHHHHC Q ss_conf 99889889980001998999999999861 Q gi|254781097|r 302 LQEGGGAKVITENFLSPERLAEELCSAMK 330 (369) Q Consensus 302 l~~~G~a~~i~~~~~~~~~l~~~i~~ll~ 330 (369) T Consensus 297 ~~~~~~~~----~~~~~~~v~~~~~~~~~ 321 (322) T PRK10964 297 CRSEGKSM----ANLSAETVFQKLETLIS 321 (322) T ss_pred EECCCCCC----CCCCHHHHHHHHHHHHC T ss_conf 96899870----21999999999999745 |
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.51 Score=26.63 Aligned_cols=298 Identities=15% Similarity=0.142 Sum_probs=128.4 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCE--EEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCH Q ss_conf 69998788525620799999999965983--9999572376762444687516875256565331233211100012110 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRGYA--VYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFI 83 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (369) T Consensus 2 kILvi~~~~iGDvvlttP~l~aLr~~~P~a~I~~l~~~~~~~l~~~~P~id--~vi~~~~~-~~~~-~~-------~~~~ 70 (348) T PRK10916 2 KILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSRMPEVN--EAIPMPLG-HGAL-EI-------GERR 70 (348) T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCC--EEEECCCC-CCCH-HH-------HHHH T ss_conf 699988876469999999999999878998899997862699995099844--89974675-5400-06-------7999 Q ss_pred HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEE-CCCCCCHHHHH--------HHHHHHHHHHCCCCC----CC Q ss_conf 135554203444243126532102478886234110122-15320015677--------889999987413432----22 Q gi|254781097|r 84 ASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVH-EQNVIMGKANR--------LLSWGVQIIARGLVS----SQ 150 (369) Q Consensus 84 ~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vih-EqN~v~G~~nk--------~l~~~a~~v~~~~~~----~~ 150 (369) T Consensus 71 ~l~~~Lr~~~yD~~i~l~~--s~rsal~~~lag~~~riG~~~~~r~~l~~~~~~~~~~~~~~~v~~~~~l~~~~~~~~~~ 148 (348) T PRK10916 71 RLGHSLREKRYDRAYVLPN--SFKSALVPFFAGIPHRTGWRGEMRYGLLNDLRVLDKEAWPLMVERYVALAYDKGVMRTA 148 (348) T ss_pred HHHHHHHHHCCCEEEECCC--CHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCH T ss_conf 9999998738998999998--67999999863777212443023444316652367433407899999877540221110 Q ss_pred CCCCCCCCEEEECCC-CHHHHHH---HHHHHHHHCCC-CCCEEEEEECC-CC-CCCH-HHHHHHHHHHHHHHCCCCCEEE Q ss_conf 235566732530444-3245654---33344331144-78148986304-32-2210-2333445443232024660677 Q gi|254781097|r 151 KKVLLRKIIVTGNPI-RSSLIKM---KDIPYQSSDLD-QPFHLLVFGGS-QG-AKVF-SDIVPKSIALIPEMQRKRLVIM 222 (369) Q Consensus 151 ~~~~~~k~~~~G~Pv-R~~~~~~---~~~~~~~~~~~-~~~~ILv~GGS-~G-a~~l-n~~v~~~~~~l~~~~~~~~~v~ 222 (369) T Consensus 149 ~~~p--------~p~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~i~pGa~~~~~KrWp~e~fa~la~~L~~~---g~~vv 217 (348) T PRK10916 149 QDLP--------QPLLWPQLQVSEGEKSYTCNQFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAKQLIDE---GYQVV 217 (348) T ss_pred HCCC--------CCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC---CCEEE T ss_conf 0057--------544555667898999999986487779977998168766656779889999999999968---99799 Q ss_pred EEECCCCHHHHHHHHHHCCC--C---CCCCCC--CCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHH Q ss_conf 62025516776532210011--1---134544--4451444300448997254202333455296048753355248989 Q gi|254781097|r 223 QQVREDDKEKVQKQYDELGC--K---ATLACF--FKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQ 295 (369) Q Consensus 223 ~~~g~~~~~~~~~~~~~~~~--~---~~v~~f--~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ 295 (369) T Consensus 218 l~G~~~e~~~~~~i~~~l~~~~~~~~~nl~GktsL~el~ali~~a~l~I~nD-SGpmHlAaA~g~P~val-F--GpT~P~ 293 (348) T PRK10916 218 LFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVILIAACKAIVTND-SGLMHVAAALNRPLVAL-Y--GPSSPD 293 (348) T ss_pred EEECHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCEEEECC-CHHHHHHHHCCCCEEEE-E--CCCCCC T ss_conf 9817236999999998510331565141678899999999998559878448-82899999809988999-8--999933 Q ss_pred H-----HHHHHHH-HCCCEE----EEE------HHCCCHHHHHHHHHHHHCC Q ss_conf 9-----9899999-889889----980------0019989999999998618 Q gi|254781097|r 296 L-----HNAYYLQ-EGGGAK----VIT------ENFLSPERLAEELCSAMKK 331 (369) Q Consensus 296 ~-----~NA~~l~-~~G~a~----~i~------~~~~~~~~l~~~i~~ll~d 331 (369) T Consensus 294 ~~~P~~~~~~vi~~~~~~~~~~~~~c~~g~~~Cm~~i~p~~V~~~~~~lL~~ 345 (348) T PRK10916 294 FTPPLSHKARVIRLITGYHKVRKGDAAQGYHQSLIDITPQRVLEELNALLLQ 345 (348) T ss_pred CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH T ss_conf 1489999848998268768767889999854645409999999999999841 |
|
| >KOG3349 consensus | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.5e-10 Score=89.94 Aligned_cols=125 Identities=21% Similarity=0.223 Sum_probs=88.0 Q ss_pred CEEEEEECCCCCCCHHHHHHHH-----HHHHHHHCCCCCEEEEEECCCCH---HHHHHHHHHCCCCCCCCCCCCCCHHHH Q ss_conf 1489863043222102333445-----44323202466067762025516---776532210011113454444514443 Q gi|254781097|r 186 FHLLVFGGSQGAKVFSDIVPKS-----IALIPEMQRKRLVIMQQVREDDK---EKVQKQYDELGCKATLACFFKDIERYI 257 (369) Q Consensus 186 ~~ILv~GGS~Ga~~ln~~v~~~-----~~~l~~~~~~~~~v~~~~g~~~~---~~~~~~~~~~~~~~~v~~f~~~m~~~~ 257 (369) T Consensus 4 ~~vFVTVGt---T~Fd~LI~~Vl~~~~~~~L~k~G~--~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I 78 (170) T KOG3349 4 MTVFVTVGT---TSFDDLISCVLSEEFLQELQKRGF--TKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDI 78 (170) T ss_pred EEEEEEECC---CCHHHHHHHHCCHHHHHHHHHCCC--CEEEEEECCCCCCCCCHHHHHCCCCCEEEEEEECCCCHHHHH T ss_conf 379999566---538999999738999999997396--389987358864789877750124875898773384178887 Q ss_pred HCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHC Q ss_conf 0044899725420233345529604875335524898999899999889889980001 Q gi|254781097|r 258 VEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENF 315 (369) Q Consensus 258 ~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~ 315 (369) T Consensus 79 ~~AdlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C~ps~ 136 (170) T KOG3349 79 RSADLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYCTPST 136 (170) T ss_pred HHCCEEEECCCCCHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCC T ss_conf 5345887458742099999749977999275764448999999998659689960565 |
|
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.56 E-value=8.6e-07 Score=66.99 Aligned_cols=118 Identities=22% Similarity=0.241 Sum_probs=85.6 Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCC--CCCCHHHHHCCCEEEE Q ss_conf 89863043222102333445443232024660677620255167765322100111134544--4451444300448997 Q gi|254781097|r 188 LLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELGCKATLACF--FKDIERYIVEANLLIC 265 (369) Q Consensus 188 ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~v~~f--~~~m~~~~~~aDlvIs 265 (369) T Consensus 2 ifVTvGst-f~~f~rlv~k~e-~~el~~~i~e~lIvQyGn~d~kpv------ag--l~v~~F~~~~kiQsli~darIVIS 71 (161) T COG5017 2 IFVTVGST-FYPFNRLVLKIE-VLELTELIQEELIVQYGNGDIKPV------AG--LRVYGFDKEEKIQSLIHDARIVIS 71 (161) T ss_pred EEEEECCC-CCHHHHHHHHHH-HHHHHHHHHHHEEEEECCCCCCCC------CC--CEEEEECHHHHHHHHHHCCEEEEE T ss_conf 48994575-552888970498-999998755533655358874445------55--278730207889998523317875 Q ss_pred CCCCHHHHHHHHHCCCEEEEECCC----CCCCHHHHHHHHHHHCCCEEEEEHHC Q ss_conf 254202333455296048753355----24898999899999889889980001 Q gi|254781097|r 266 RSGALTVSEIAVIGRPAILVPYPH----SVDQDQLHNAYYLQEGGGAKVITENF 315 (369) Q Consensus 266 raG~~Ti~E~~~~g~P~IlIP~p~----a~~~hQ~~NA~~l~~~G~a~~i~~~~ 315 (369) T Consensus 72 HaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~spte 125 (161) T COG5017 72 HAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACSPTE 125 (161) T ss_pred CCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC T ss_conf 268641777762499489987716677764269999999997549638973771 |
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.1e-07 Score=69.27 Aligned_cols=114 Identities=16% Similarity=0.163 Sum_probs=76.2 Q ss_pred CCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCC--CHHHHHCCCEEEECC--C-CHHHHHHHHHCCCEEEEECCCCCC Q ss_conf 60677620255167765322100111134544445--144430044899725--4-202333455296048753355248 Q gi|254781097|r 218 RLVIMQQVREDDKEKVQKQYDELGCKATLACFFKD--IERYIVEANLLICRS--G-ALTVSEIAVIGRPAILVPYPHSVD 292 (369) Q Consensus 218 ~~~v~~~~g~~~~~~~~~~~~~~~~~~~v~~f~~~--m~~~~~~aDlvIsra--G-~~Ti~E~~~~g~P~IlIP~p~a~~ 292 (369) T Consensus 223 ~L~i~--G~g~~~~~l~~~~---~~~V~f~g~~~~~~~~~~~~~a~~~v~ps~E~FGi~~vEAma~G~PvIa~~~----g 293 (351) T cd03804 223 RLVVI--GDGPELDRLRAKA---GPNVTFLGRVSDEELRDLYARARAFLFPAEEDFGIVPVEAMASGTPVIAYGK----G 293 (351) T ss_pred CEEEE--ECCHHHHHHHHHC---CCCEEEEECCCHHHHHHHHHHCCEEEECCHHCCCCHHHHHHHCCCCEEEECC----C T ss_conf 78999--8473799999667---8987998038989999999838869951642079759999976998898289----9 Q ss_pred CHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHH-HHHHHHHCC Q ss_conf 989998999998898899800019989999999998618999999-999998527 Q gi|254781097|r 293 QDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQ-MAKQVSMKG 346 (369) Q Consensus 293 ~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~-m~~~~~~~~ 346 (369) T Consensus 294 G----~~e~v~~g~tG~l~~~~--~~~~la~ai~~~~~~~~~~~~~~r~~a~~Fs 342 (351) T cd03804 294 G----ALETVIDGVTGILFEEQ--TVESLAAAVERFEKNEDFDPQAIRAHAERFS 342 (351) T ss_pred C----CCCEECCCCCEEEECCC--CHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC T ss_conf 9----75501589978995989--9999999999998595015999999999679 |
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00062 Score=47.01 Aligned_cols=91 Identities=13% Similarity=0.122 Sum_probs=54.6 Q ss_pred CCCCCCCCC--CCCHHHHHCCCEEEE-----CCCCHHHHHHHHHCCCEEEE----ECCCCCCCHHHHHHHHHHHCCCEEE Q ss_conf 111345444--451444300448997-----25420233345529604875----3355248989998999998898899 Q gi|254781097|r 242 CKATLACFF--KDIERYIVEANLLIC-----RSGALTVSEIAVIGRPAILV----PYPHSVDQDQLHNAYYLQEGGGAKV 310 (369) Q Consensus 242 ~~~~v~~f~--~~m~~~~~~aDlvIs-----raG~~Ti~E~~~~g~P~IlI----P~p~a~~~hQ~~NA~~l~~~G~a~~ 310 (369) T Consensus 305 ~~V~f~~~~s~~e~~~lL~~a~~~l~T~~nEHFG-I~pVEaMaaG~pvvA~nSGGP~edIV~--------~~~~~~tGfL 375 (419) T cd03806 305 DKVEFVVNAPFEELLEELSTASIGLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGPLLDIVV--------PWDGGPTGFL 375 (419) T ss_pred CCEEEEECCCHHHHHHHHHHCEEEEECCCCCCCC-CHHHHHHHCCCCEEEECCCCCCCCEEE--------ECCCCCCCCC T ss_conf 8769981599899999997397988557325668-589999866995799788897530776--------0589985112 Q ss_pred EEHHCCCHHHHHHHHHHHHCCH-HHHHHHHHHHHHC Q ss_conf 8000199899999999986189-9999999999852 Q gi|254781097|r 311 ITENFLSPERLAEELCSAMKKP-SCLVQMAKQVSMK 345 (369) Q Consensus 311 i~~~~~~~~~l~~~i~~ll~d~-~~l~~m~~~~~~~ 345 (369) T Consensus 376 ~~----~~~e~a~a~~~~l~~~~~~~~~~~~~ar~~ 407 (419) T cd03806 376 AS----TAEEYAEAIEKILSLSEEERLRIRRAARSS 407 (419) T ss_pred CC----CHHHHHHHHHHHHCCCHHHHHHHHHHHHHH T ss_conf 79----879999999999819987899999999999 |
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >pfam04464 Glyphos_transf CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase | Back alignment and domain information |
|---|
Probab=97.98 E-value=8.9e-05 Score=52.90 Aligned_cols=110 Identities=13% Similarity=0.155 Sum_probs=73.9 Q ss_pred CCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH----HHHHCCCEEEEEHHCCC Q ss_conf 11134544445144430044899725420233345529604875335524898999899----99988988998000199 Q gi|254781097|r 242 CKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAY----YLQEGGGAKVITENFLS 317 (369) Q Consensus 242 ~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~----~l~~~G~a~~i~~~~~~ 317 (369) T Consensus 69 ~~~~~~~~~~di~~ll~~aDiLITDY-SSi~fD~lll~kPii~~~~----D~~~Y~~~rg~~~d~~~~~~g~~v~----~ 139 (186) T pfam04464 69 SDVIDVSDYSDIQDLFLASDILITDY-SSVFFDFALLDKPIIFYAP----DLEEYRELRGFYFDYEKEAPGPVVK----T 139 (186) T ss_pred CCEEECCCCCCHHHHHHHHCEEEEEH-HHHHHHHHHHCCCEEEEEC----CHHHHHHCCCCCCCHHHCCCCCEEC----C T ss_conf 76797889858999999843677646-8899999987997899818----7899975258610587807876259----8 Q ss_pred HHHHHHHHHHHHCCHH----HHHHHHHHHHHCCCCHHHHHHHHHHHH Q ss_conf 8999999999861899----999999999852783279999999999 Q gi|254781097|r 318 PERLAEELCSAMKKPS----CLVQMAKQVSMKGKPQAVLMLSDLVEK 360 (369) Q Consensus 318 ~~~l~~~i~~ll~d~~----~l~~m~~~~~~~~~~~aa~~i~~~i~~ 360 (369) T Consensus 140 ~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~DG~s~eRv~~~I~~ 186 (186) T pfam04464 140 FEELLDALKNYMENDEEYAEKRRAFRDKFFPYDDGKSSERVLNRIFK 186 (186) T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC T ss_conf 99999999998757767799999999982887588089999999839 |
Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.12 Score=30.93 Aligned_cols=110 Identities=13% Similarity=0.192 Sum_probs=68.0 Q ss_pred CCCCCCCCCC--CCHHHHHCCCEEEEC--C--CCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHC Q ss_conf 1113454444--514443004489972--5--420233345529604875335524898999899999889889980001 Q gi|254781097|r 242 CKATLACFFK--DIERYIVEANLLICR--S--GALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENF 315 (369) Q Consensus 242 ~~~~v~~f~~--~m~~~~~~aDlvIsr--a--G~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~ 315 (369) T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~--------~~~~~~~~~~~g~~~~~~- 327 (381) T COG0438 257 DNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVG--------GIPEVVEDGETGLLVPPG- 327 (381) T ss_pred CCEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCEEEECCCC--------CHHHHHCCCCEEEEECCC- T ss_conf 87899177898999999972809991786445588999999849869995899--------868843069706998899- Q ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHH Q ss_conf 998999999999861899999999999-8527832799999999999 Q gi|254781097|r 316 LSPERLAEELCSAMKKPSCLVQMAKQV-SMKGKPQAVLMLSDLVEKL 361 (369) Q Consensus 316 ~~~~~l~~~i~~ll~d~~~l~~m~~~~-~~~~~~~aa~~i~~~i~~l 361 (369) T Consensus 328 -~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (381) T COG0438 328 -DVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLEL 373 (381) T ss_pred -CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH T ss_conf -9999999999998697999999999999999866999999999999 |
|
| >pfam06925 MGDG_synth Monogalactosyldiacylglycerol (MGDG) synthase | Back alignment and domain information |
|---|
Probab=98.03 E-value=9e-07 Score=66.85 Aligned_cols=78 Identities=17% Similarity=0.210 Sum_probs=50.9 Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCHHHHHH-HHHC------CCCCE--EECCCCCCHHHHHHHHHHHHHHHCCCCCCCC- Q ss_conf 101355542034442431265321024788-8623------41101--2215320015677889999987413432222- Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGYHSISPLLA-GMIL------RIPSM--VHEQNVIMGKANRLLSWGVQIIARGLVSSQK- 151 (369) Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy~s~P~~ia-A~~l------~iP~v--ihEqN~v~G~~nk~l~~~a~~v~~~~~~~~~- 151 (369) T Consensus 78 ~~~l~~~i~~~~PD~IV~T---hp~~~~~~l~~lk~~~~~~~~p~~tViTD--~~-~~H~~W~~~~~D~y~Va~ee~~~~ 151 (169) T pfam06925 78 ARELAALLKEFQPDIIIST---HPLPAAVPLSVLKSKGLLKRVLVVTVVTD--FR-TCHPFWLHPEIDRYYVPSKEVKKE 151 (169) T ss_pred HHHHHHHHHHHCCCEEEEC---CHHHHHHHHHHHHHCCCCCCCCEEEEECC--CC-CCCCCCCCCCCCEEEECCHHHHHH T ss_conf 9999999998493999999---76266789999998387889978999898--86-665781689999899799999999 Q ss_pred ----CCCCCCCEEEECCC Q ss_conf ----35566732530444 Q gi|254781097|r 152 ----KVLLRKIIVTGNPI 165 (369) Q Consensus 152 ----~~~~~k~~~~G~Pv 165 (369) T Consensus 152 l~~~Gi~~~kI~vtGIPV 169 (169) T pfam06925 152 ALEKGIDPSNIKVTGIPV 169 (169) T ss_pred HHHCCCCHHHEEEECCCC T ss_conf 998599988978837459 |
This family represents a conserved region of approximately 180 residues within plant and bacterial monogalactosyldiacylglycerol (MGDG) synthase (EC:2.4.1.46). In Arabidopsis, there are two types of MGDG synthase which differ in their N-terminal portion: type A and type B. |
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0011 Score=45.33 Aligned_cols=104 Identities=15% Similarity=0.232 Sum_probs=72.3 Q ss_pred CCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH----CCCEEEEEHHCCCHHHHHHHHH Q ss_conf 451444300448997254202333455296048753355248989998999998----8988998000199899999999 Q gi|254781097|r 251 KDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQE----GGGAKVITENFLSPERLAEELC 326 (369) Q Consensus 251 ~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~----~G~a~~i~~~~~~~~~l~~~i~ 326 (369) T Consensus 303 qsfadiLH~adaalgmAGTAtE-QavGLGkPvi~fP--g~--GPQy-~pgFA~rQ~rLLG~sltlv~~~--aq~a~~~~q 374 (412) T COG4370 303 QSFADILHAADAALGMAGTATE-QAVGLGKPVIGFP--GQ--GPQY-NPGFAERQQRLLGASLTLVRPE--AQAAAQAVQ 374 (412) T ss_pred HHHHHHHHHHHHHHHHCCCHHH-HHHCCCCCEEECC--CC--CCCC-CHHHHHHHHHHHCCEEEECCCC--HHHHHHHHH T ss_conf 8899999889999875441677-7633698624368--98--9875-8179999999852534541775--456899999 Q ss_pred HHHCCHHHHHHHHHH-HHHCCCCHHHHHHHHHHHHHH Q ss_conf 986189999999999-985278327999999999999 Q gi|254781097|r 327 SAMKKPSCLVQMAKQ-VSMKGKPQAVLMLSDLVEKLA 362 (369) Q Consensus 327 ~ll~d~~~l~~m~~~-~~~~~~~~aa~~i~~~i~~la 362 (369) T Consensus 375 ~ll~dp~r~~air~nGqrRiGqaGaa~rIAe~l~e~a 411 (412) T COG4370 375 ELLGDPQRLTAIRHNGQRRIGQAGAARRIAEELGEMA 411 (412) T ss_pred HHHCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHC T ss_conf 9844817778887534433167623789999998743 |
|
| >COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.059 Score=33.19 Aligned_cols=103 Identities=15% Similarity=0.188 Sum_probs=71.2 Q ss_pred CCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH----HHHHCCCEEEEEHHCCCHHHHHHHH Q ss_conf 445144430044899725420233345529604875335524898999899----9998898899800019989999999 Q gi|254781097|r 250 FKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAY----YLQEGGGAKVITENFLSPERLAEEL 325 (369) Q Consensus 250 ~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~----~l~~~G~a~~i~~~~~~~~~l~~~i 325 (369) T Consensus 277 ~~di~dll~~sDiLITD-ySSv~fdf~~l~KPiif----y~~D~~~y~~~rg~~~d~~~~~Pg~~~~----~~~~li~ai 347 (388) T COG1887 277 NADINDLLLVSDILITD-YSSVIFDFMLLDKPIIF----YTYDLEQYDELRGFYLDYKFEAPGEVVE----TQEELIDAI 347 (388) T ss_pred CHHHHHHHHHCCEEEEC-CCCHHHHHHHHCCCEEE----EECCCHHHHHCCCHHHHHHHCCCCCHHC----CHHHHHHHH T ss_conf 34499998754888851-63004668865596799----9647047554011244577619951103----689999987 Q ss_pred HHHHCC----HHHHHHHHHHHHHCCCCHHHHHHHHHHHHH Q ss_conf 998618----999999999998527832799999999999 Q gi|254781097|r 326 CSAMKK----PSCLVQMAKQVSMKGKPQAVLMLSDLVEKL 361 (369) Q Consensus 326 ~~ll~d----~~~l~~m~~~~~~~~~~~aa~~i~~~i~~l 361 (369) T Consensus 348 ~~~~~~~~~~~~k~~~~~~~~~~~~dg~ss~ri~~~i~~~ 387 (388) T COG1887 348 KPYDEDGNYDLEKLRVFNDKFNSYEDGRSSERILKLIFKL 387 (388) T ss_pred HHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC T ss_conf 7531022156888987777751234730778999998503 |
|
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.18 Score=29.74 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=52.8 Q ss_pred CCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEHHCCCHHHHHHHHHHHHC Q ss_conf 514443004489972542023334552960487533552489899989999988988-9980001998999999999861 Q gi|254781097|r 252 DIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGA-KVITENFLSPERLAEELCSAMK 330 (369) Q Consensus 252 ~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a-~~i~~~~~~~~~l~~~i~~ll~ 330 (369) T Consensus 278 ~~~~~l~~~dl~Vg~R~HsaI-~al~~g~p~i~i~Y-------~~K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~~~ 349 (385) T COG2327 278 ELGGILAACDLIVGMRLHSAI-MALAFGVPAIAIAY-------DPKVRGLMQDLGLPGFAIDIDPLDAEILSAVVLERLT 349 (385) T ss_pred HHHHHHCCCCEEEEEHHHHHH-HHHHCCCCEEEEEE-------CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH T ss_conf 988775157459862168999-99865997589860-------5777899997299752224778756778999999973 Q ss_pred -CHHHHHH Q ss_conf -8999999 Q gi|254781097|r 331 -KPSCLVQ 337 (369) Q Consensus 331 -d~~~l~~ 337 (369) T Consensus 350 ~~~~~~~~ 357 (385) T COG2327 350 KLDELRER 357 (385) T ss_pred CCHHHHHH T ss_conf 45877765 |
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.19 Score=29.65 Aligned_cols=99 Identities=16% Similarity=0.138 Sum_probs=62.7 Q ss_pred CCHHHHHCCCEE--EEC-----CC---CHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHH Q ss_conf 514443004489--972-----54---20233345529604875335524898999899999889889980001998999 Q gi|254781097|r 252 DIERYIVEANLL--ICR-----SG---ALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERL 321 (369) Q Consensus 252 ~m~~~~~~aDlv--Isr-----aG---~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l 321 (369) T Consensus 250 ~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~---------~~e~~f~pgk~~iv~~---d~kdl 317 (373) T COG4641 250 GVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWK---------DLEKFFKPGKDIIVYQ---DSKDL 317 (373) T ss_pred HHHHCCCCCCEEEEECHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHH---------HHHHHCCCCHHEEEEC---CHHHH T ss_conf 00000355443564137888761478505688876158750154278---------8987259860258963---78999 Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHH Q ss_conf 999999861899999999999852--78327999999999999 Q gi|254781097|r 322 AEELCSAMKKPSCLVQMAKQVSMK--GKPQAVLMLSDLVEKLA 362 (369) Q Consensus 322 ~~~i~~ll~d~~~l~~m~~~~~~~--~~~~aa~~i~~~i~~la 362 (369) T Consensus 318 ~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~ 360 (373) T COG4641 318 KEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIA 360 (373) T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH T ss_conf 9999998448306899998669999874327888999999999 |
|
| >KOG0853 consensus | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.036 Score=34.67 Aligned_cols=102 Identities=14% Similarity=0.126 Sum_probs=61.2 Q ss_pred HHHCCCEEE-ECCC---CHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCC Q ss_conf 430044899-7254---202333455296048753355248989998999998898899800019989999999998618 Q gi|254781097|r 256 YIVEANLLI-CRSG---ALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKK 331 (369) Q Consensus 256 ~~~~aDlvI-sraG---~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d 331 (369) T Consensus 362 l~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~----~GG----P~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~ 433 (495) T KOG0853 362 LAADTKGVLYQPANEHFGIVPIEAMACGLPVVATN----NGG----PAEIVVHGVTGLLIDPGQEAVAELADALLKLRRD 433 (495) T ss_pred HHHHCCEEEECCCCCCCCCEEHHHHHCCCCEEEEC----CCC----CEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCC T ss_conf 98744357726888775633398785599889966----999----6578984885044577457789999999998139 Q ss_pred HHHHHHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHH Q ss_conf 9999999999985278-----327999999999999855 Q gi|254781097|r 332 PSCLVQMAKQVSMKGK-----PQAVLMLSDLVEKLAHVK 365 (369) Q Consensus 332 ~~~l~~m~~~~~~~~~-----~~aa~~i~~~i~~la~~k 365 (369) T Consensus 434 p~l~~~~~~~G~krV~e~fs~~~~~~ri~~~~~~~~~~~ 472 (495) T KOG0853 434 PELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYLQWE 472 (495) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 899999988788999998707779999999877507742 |
|
| >KOG1387 consensus | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.2 Score=29.44 Aligned_cols=78 Identities=17% Similarity=0.183 Sum_probs=47.4 Q ss_pred CCCHHHHHCCCEEEE-----CCCCHHHHHHHHHCCCEEE---------EECCCCCCCHHHHHHHHHHHCCCEEEEEHHCC Q ss_conf 451444300448997-----2542023334552960487---------53355248989998999998898899800019 Q gi|254781097|r 251 KDIERYIVEANLLIC-----RSGALTVSEIAVIGRPAIL---------VPYPHSVDQDQLHNAYYLQEGGGAKVITENFL 316 (369) Q Consensus 251 ~~m~~~~~~aDlvIs-----raG~~Ti~E~~~~g~P~Il---------IP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~ 316 (369) T Consensus 348 ~~lv~lL~~a~iGvh~MwNEHFG-IsVVEyMAAGlIpi~h~SgGP~lDIV~~--~~G~~t-----------GFla~---- 409 (465) T KOG1387 348 EKLVELLGKATIGVHTMWNEHFG-ISVVEYMAAGLIPIVHNSGGPLLDIVTP--WDGETT-----------GFLAP---- 409 (465) T ss_pred HHHHHHHCCCEEEHHHHHHHHCC-HHHHHHHHCCCEEEEECCCCCCEEEEEC--CCCCCC-----------EEECC---- T ss_conf 99999861155545244552035-5689987557268870789973236404--578601-----------01158---- Q ss_pred CHHHHHHHHHHHHC-CHHHHHHHHHHHHHCC Q ss_conf 98999999999861-8999999999998527 Q gi|254781097|r 317 SPERLAEELCSAMK-KPSCLVQMAKQVSMKG 346 (369) Q Consensus 317 ~~~~l~~~i~~ll~-d~~~l~~m~~~~~~~~ 346 (369) T Consensus 410 t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~ 440 (465) T KOG1387 410 TDEEYAEAILKIVKLNYDERNMMRRNARKSL 440 (465) T ss_pred CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH T ss_conf 7289999999999719888888899999999 |
|
| >PRK09814 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.086 Score=32.01 Aligned_cols=62 Identities=23% Similarity=0.198 Sum_probs=46.1 Q ss_pred HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC Q ss_conf 3345529604875335524898999899999889889980001998999999999861899999999999852783 Q gi|254781097|r 273 SEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKP 348 (369) Q Consensus 273 ~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~ 348 (369) T Consensus 258 SLYLaaGiPVI-VW-------~~aAla~fV~~n~lGi~V~----sL~ei~~~l~~i--t~~eY~~m~~Nv~~i~~k 319 (337) T PRK09814 258 SLYLAAGLPVI-VW-------SKAAIADFIVENNLGFVVD----SLEELPEKINNM--TEEEYNEMVENVKKIAQK 319 (337) T ss_pred HHHHHCCCCEE-EC-------CCHHHHHHHHHCCCEEEEC----CHHHHHHHHHHC--CHHHHHHHHHHHHHHHHH T ss_conf 89987499889-82-------7315678999769769987----899999999858--999999999999999999 |
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase; InterPro: IPR012819 Sucrose occupies a central position in the metabolic pathways of all plants and plays a variety of roles including transport sugar, storage reserve, compatible solute, and signal compound | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.031 Score=35.14 Aligned_cols=87 Identities=15% Similarity=0.121 Sum_probs=56.5 Q ss_pred CCCHHHHHCCCE----EE----ECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHH Q ss_conf 451444300448----99----7254202333455296048753355248989998999998898899800019989999 Q gi|254781097|r 251 KDIERYIVEANL----LI----CRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLA 322 (369) Q Consensus 251 ~~m~~~~~~aDl----vI----sraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~ 322 (369) T Consensus 563 sDVP~IYRLAAktKGVFINPA~~EPFGLTLIEAAa~GLP~VATK------NGGPVDI~~vL~NG--LLvDPHd--q~aIa 632 (1072) T TIGR02468 563 SDVPDIYRLAAKTKGVFINPALIEPFGLTLIEAAAYGLPMVATK------NGGPVDIHRVLDNG--LLVDPHD--QEAIA 632 (1072) T ss_pred CCCCHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHCCCCEEEEC------CCCCHHHHHHHHCC--CCCCCCC--HHHHH T ss_conf 88724889974279657523210456436899986399779835------86813388773178--7336776--68899 Q ss_pred HHHHHHHCCHHHHHHHHHHHHHCCC Q ss_conf 9999986189999999999985278 Q gi|254781097|r 323 EELCSAMKKPSCLVQMAKQVSMKGK 347 (369) Q Consensus 323 ~~i~~ll~d~~~l~~m~~~~~~~~~ 347 (369) T Consensus 633 ~ALLkLvadK~LW~~CR~NGLkNIH 657 (1072) T TIGR02468 633 DALLKLVADKQLWAKCRQNGLKNIH 657 (1072) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCC T ss_conf 9999986215778999736450245 |
This compound is produced by the combined action of two enzymes, sucrose-phosphate synthase (2.4.1.14 from EC) and sucrose-phosphate phosphatase (3.1.3.24 from EC), via the intermediate sucrose 6-phosphate. Several studies have shown a positive correlation between sucrose-phosphate synthase activity and plant growth rate and yield in agronomically important plants, though direct proof of a causal link is lacking. This entry represents sucrose-phosphate synthase from plants, which is known to exist in multigene families in several species of both monocots and dicots. The enzyme contains an N-terminal domain glucosyltransferase domain, a variable linker region, and a C-terminal domain similar to that of sucrose-phosphate phosphatase, the next and final enzyme of sucrose biosynthesis. The C-terminal domain is likely to serve a binding - not a catalytic - function, as sucrose-phosphate phosphatase is always encoded by a distinct protein. ; GO: 0046524 sucrose-phosphate synthase activity, 0005985 sucrose metabolic process. |
| >KOG4626 consensus | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.63 Score=25.98 Aligned_cols=84 Identities=14% Similarity=0.109 Sum_probs=60.6 Q ss_pred HHHCCCEEEEC---CCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCH Q ss_conf 43004489972---542023334552960487533552489899989999988988998000199899999999986189 Q gi|254781097|r 256 YIVEANLLICR---SGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKP 332 (369) Q Consensus 256 ~~~~aDlvIsr---aG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~ 332 (369) T Consensus 832 r~~LaDv~LDTplcnGhTTg~dvLw~GvPmVTmpge~lA---srVa~Sll~~~Gl~hliak---~~eEY~~iaV~Latd~ 905 (966) T KOG4626 832 RGQLADVCLDTPLCNGHTTGMDVLWAGVPMVTMPGETLA---SRVAASLLTALGLGHLIAK---NREEYVQIAVRLATDK 905 (966) T ss_pred HHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEECCCHHHH---HHHHHHHHHHCCCHHHHHH---HHHHHHHHHHHHHCCH T ss_conf 655665201576758866552331037742633508889---8989999998162888751---2899999999860577 Q ss_pred HHHHHHHHHHHHC Q ss_conf 9999999999852 Q gi|254781097|r 333 SCLVQMAKQVSMK 345 (369) Q Consensus 333 ~~l~~m~~~~~~~ 345 (369) T Consensus 906 ~~L~~lr~~l~~~ 918 (966) T KOG4626 906 EYLKKLRAKLRKA 918 (966) T ss_pred HHHHHHHHHHHHH T ss_conf 9999999999998 |
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.059 Score=33.15 Aligned_cols=203 Identities=14% Similarity=0.107 Sum_probs=90.0 Q ss_pred CCEEEECCCCC--------CH----HHHHHHHHCCCCCEEECCCCCC--HHHHHHHHH----HHHHHHCCCCCCCCCC-- Q ss_conf 44243126532--------10----2478886234110122153200--156778899----9998741343222235-- Q gi|254781097|r 94 PNVVVGFGGYH--------SI----SPLLAGMILRIPSMVHEQNVIM--GKANRLLSW----GVQIIARGLVSSQKKV-- 153 (369) Q Consensus 94 PDvVi~tGGy~--------s~----P~~iaA~~l~iP~vihEqN~v~--G~~nk~l~~----~a~~v~~~~~~~~~~~-- 153 (369) T Consensus 65 ~d~~I~GGG~llqD~ts~~s~~yy~~~~~la~~~gkpv~~~gqgiGP~~~~~~r~l~r~~l~~~~~i~vRD~~S~~~l~~ 144 (298) T TIGR03609 65 ADVVIWGGGSLLQDVTSFRSLLYYLGLMRLARLFGKPVILWGQGIGPLRRRLSRWLVRRVLRGCRAISVRDAASYRLLKR 144 (298) T ss_pred CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHH T ss_conf 79999858541458875434789999999999829988999426887678789999999984199999778888999997 Q ss_pred CCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCC-C-CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH Q ss_conf 566732530444324565433344331144781489863043-2-22102333445443232024660677620255167 Q gi|254781097|r 154 LLRKIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQ-G-AKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKE 231 (369) Q Consensus 154 ~~~k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~-G-a~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~ 231 (369) T Consensus 145 lGv~~~l~~D~a---f~-l~~~~~~~~~~~~~~~i~v~~r~~~~~~~~~~~~~~~~l~~l~~~~g~~V~~lp~~~~~D~~ 220 (298) T TIGR03609 145 LGIPAELAADPV---WL-LPPEPWPGGEPLPEPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLP 220 (298) T ss_pred CCCCEEEECCEE---EC-CCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHH T ss_conf 499848967713---20-57755444445679989999788887899999999999999998359869999688785499 Q ss_pred HHHHHHHHCCCCCCCCC--CCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCE Q ss_conf 76532210011113454--444514443004489972542023334552960487533552489899989999988988 Q gi|254781097|r 232 KVQKQYDELGCKATLAC--FFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGA 308 (369) Q Consensus 232 ~~~~~~~~~~~~~~v~~--f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a 308 (369) T Consensus 221 ~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~~RlH~~I-~A~~~gvP~i~isY-------~~Kv~~f~~~~G~p 291 (298) T TIGR03609 221 LARALRDQLLGPAEVLSPLDPEELLGLFASARLVIGMRLHALI-LAAAAGVPFVALSY-------DPKVRAFAADAGVP 291 (298) T ss_pred HHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCEEEEECCHHHH-HHHHCCCCEEEECC-------HHHHHHHHHHCCCC T ss_conf 9999997578863653789999999999609989980708999-99977999899530-------79999999976999 |
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.33 E-value=1.4 Score=23.46 Aligned_cols=192 Identities=12% Similarity=0.151 Sum_probs=87.7 Q ss_pred CCCCEEEE-CCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHH Q ss_conf 34442431-26532102478886234110122153200156778899999874134322223556673253044432456 Q gi|254781097|r 92 LKPNVVVG-FGGYHSISPLLAGMILRIPSMVHEQNVIMGKANRLLSWGVQIIARGLVSSQKKVLLRKIIVTGNPIRSSLI 170 (369) Q Consensus 92 ~kPDvVi~-tGGy~s~P~~iaA~~l~iP~vihEqN~v~G~~nk~l~~~a~~v~~~~~~~~~~~~~~k~~~~G~PvR~~~~ 170 (369) T Consensus 72 ~~~~gViaaSaGNHaQGvA~aa~~lGi~a~IvMP~~tp~--~Kv-----~a~---------r~~GaeVil~g~----~~d 131 (347) T COG1171 72 ERAAGVIAASAGNHAQGVAYAAKRLGIKATIVMPETTPK--IKV-----DAT---------RGYGAEVILHGD----NFD 131 (347) T ss_pred HHCCCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCH--HHH-----HHH---------HHCCCEEEEECC----CHH T ss_conf 104756996587379999999998099879995699829--999-----999---------856988999799----779 Q ss_pred HHHHHHHHHH---C------CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCC Q ss_conf 5433344331---1------447814898630432221023334454432320246606776202551677653221001 Q gi|254781097|r 171 KMKDIPYQSS---D------LDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDELG 241 (369) Q Consensus 171 ~~~~~~~~~~---~------~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~ 241 (369) T Consensus 132 da~~~a~~~a~~~G~~~i~pfD~p---~viAG-QGT-----i~lEileq~~~~--~d~v~vpvGGGGLisGia~~~k~~~ 200 (347) T COG1171 132 DAYAAAEELAEEEGLTFVPPFDDP---DVIAG-QGT-----IALEILEQLPDL--PDAVFVPVGGGGLISGIATALKALS 200 (347) T ss_pred HHHHHHHHHHHHCCCEEECCCCCC---CEEEC-CCH-----HHHHHHHHCCCC--CCEEEEECCCCHHHHHHHHHHHHHC T ss_conf 999999999997397885899994---52534-258-----999999846456--8989995386479999999999839 Q ss_pred CCCCCCCCC----CCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEHHCC Q ss_conf 111345444----451444300448997254202333455296048753355248989998999998898-899800019 Q gi|254781097|r 242 CKATLACFF----KDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGG-AKVITENFL 316 (369) Q Consensus 242 ~~~~v~~f~----~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~-a~~i~~~~~ 316 (369) T Consensus 201 p~~~vIGVEp~~a~~~~~Sl~~G~~~~~~~~~~tiaDG~av~~~g~-----------~tf--~i~~~~vd~~v~V----- 262 (347) T COG1171 201 PEIKVIGVEPEGAPSMYASLKAGKIVVVLPDVGTIADGLAVKRPGD-----------LTF--EILRELVDDIVLV----- 262 (347) T ss_pred CCCEEEEEEECCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCH-----------HHH--HHHHHCCCCEEEE----- T ss_conf 9972999814888589999975994353698780025420488877-----------789--9999709968998----- Q ss_pred CHHHHHHHHHHHHCCH Q ss_conf 9899999999986189 Q gi|254781097|r 317 SPERLAEELCSAMKKP 332 (369) Q Consensus 317 ~~~~l~~~i~~ll~d~ 332 (369) T Consensus 263 ~e~ei~~am~~l~~~~ 278 (347) T COG1171 263 DEDEICAAMRDLFERT 278 (347) T ss_pred CHHHHHHHHHHHHHCC T ss_conf 8899999999997327 |
|
| >PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.021 Score=36.31 Aligned_cols=89 Identities=13% Similarity=0.171 Sum_probs=45.2 Q ss_pred ECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEE--CCCCCCCCHHHHHHH---HHHCCCCCHH Q ss_conf 87885256207999999999659839999572376762444687516875--256565331233211---1000121101 Q gi|254781097|r 10 VAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIV--SSQVRFSNPFVFWNS---LVILWKAFIA 84 (369) Q Consensus 10 ~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---l~~~~~~~~~ 84 (369) T Consensus 58 tvGGt-GKTP~v~~la~~l~~~g~~~~IlSRGYg~~~~~----~~~v~~~~~~~~~vGDEpllla~~~~~~v~V~~~R~~ 132 (334) T PRK00652 58 TVGGN-GKTPVVIWLAEQLQARGVKVGVVSRGYGGKSKG----YPLVLPADTTAAEVGDEPVLIAQRTGAPVAVSPDRVK 132 (334) T ss_pred EECCC-CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC----CEEEECCCCCHHHCCCHHHHHHHCCCCCEEEECCHHH T ss_conf 87887-779999999999997699367873466765678----7276179998355186899985178983999566899 Q ss_pred HHHHHHHCCCCEEEECCCC Q ss_conf 3555420344424312653 Q gi|254781097|r 85 SLRLIKKLKPNVVVGFGGY 103 (369) Q Consensus 85 ~~~ii~~~kPDvVi~tGGy 103 (369) T Consensus 133 ~~~~l~~~~~dviIlDDGf 151 (334) T PRK00652 133 AIKALLALGADIIILDDGL 151 (334) T ss_pred HHHHHHHCCCCEEEECCCC T ss_conf 9999996599999974766 |
|
| >pfam02606 LpxK Tetraacyldisaccharide-1-P 4'-kinase | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.018 Score=36.85 Aligned_cols=87 Identities=17% Similarity=0.174 Sum_probs=46.1 Q ss_pred ECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECC-CC--CCCCHHHHHHHH-HHCCC--CCH Q ss_conf 8788525620799999999965983999957237676244468751687525-65--653312332111-00012--110 Q gi|254781097|r 10 VAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSS-QV--RFSNPFVFWNSL-VILWK--AFI 83 (369) Q Consensus 10 ~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~l-~~~~~--~~~ 83 (369) T Consensus 44 t~GGt-GKTP~v~~l~~~l~~~g~~~~ilSRGYg~~~~~------~~~v~~~~~~~~~GDEp~lla~~~~~~v~V~~~R~ 116 (318) T pfam02606 44 TVGGT-GKTPLVIALAELLRARGLRPGVLSRGYGGKSKG------PVLVDPGSSAAEVGDEPLLLARRTPVPVVVGPDRA 116 (318) T ss_pred EECCC-CHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC------CEEECCCCCHHHCCCHHHHHHHHCCCCEEECCCHH T ss_conf 45887-858999999999997699447832676765788------78971688946739699999875698599805289 Q ss_pred H-HHHHHHHCCCCEEEECCCC Q ss_conf 1-3555420344424312653 Q gi|254781097|r 84 A-SLRLIKKLKPNVVVGFGGY 103 (369) Q Consensus 84 ~-~~~ii~~~kPDvVi~tGGy 103 (369) T Consensus 117 ~a~~~l~~~~~~dviIlDDGf 137 (318) T pfam02606 117 AAARALLEAHGADVIILDDGF 137 (318) T ss_pred HHHHHHHHHCCCCEEEECCCC T ss_conf 999999984899799914866 |
This family consists of tetraacyldisaccharide-1-P 4'-kinase also known as Lipid-A 4'-kinase or Lipid A biosynthesis protein LpxK, EC:2.7.1.130. This enzyme catalyses the reaction: ATP + 2,3-bis(3-hydroxytetradecanoyl)-D -glucosaminyl-(beta-D-1,6)-2,3-bis(3-hydroxytetradecanoyl)-D-glu cosam inyl beta-phosphate <= ADP + 2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-D- glucosaminyl-1,6-beta-D-glucosamine 1,4'-bisphosphate. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS). The family contains a P-loop motif at the N terminus. |
| >COG1663 LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.039 Score=34.39 Aligned_cols=91 Identities=18% Similarity=0.170 Sum_probs=46.2 Q ss_pred ECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHH---HHHCCCCCHHHH Q ss_conf 87885256207999999999659839999572376762444687516875256565331233211---100012110135 Q gi|254781097|r 10 VAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNS---LVILWKAFIASL 86 (369) Q Consensus 10 ~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~ 86 (369) T Consensus 56 tvGGt-GKTP~vi~la~~l~~rG~~~gvvSRGYgg~~~~~~~~~~~~~--~a~~~GDEPlLlA~~t~~pv~v~~~R~~~~ 132 (336) T COG1663 56 TVGGT-GKTPVVIWLAEALQARGVRVGVVSRGYGGKLKVVPLVDNIHT--TAAEVGDEPLLLARRTGAPVAVSPDRKDAA 132 (336) T ss_pred EECCC-CCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCC--CHHHCCCHHHHHHHHCCCCEEEEHHHHHHH T ss_conf 77789-968899999999986697367980576888765410256767--867728468887553399689864298999 Q ss_pred HHHHH--CCCCEEEECCCC Q ss_conf 55420--344424312653 Q gi|254781097|r 87 RLIKK--LKPNVVVGFGGY 103 (369) Q Consensus 87 ~ii~~--~kPDvVi~tGGy 103 (369) T Consensus 133 ~~l~~~~~~~diIi~DDG~ 151 (336) T COG1663 133 KALLAAHLGCDIIVLDDGL 151 (336) T ss_pred HHHHHHCCCCCEEEECCCC T ss_conf 9998517898999976743 |
|
| >pfam01370 Epimerase NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.17 Score=29.96 Aligned_cols=77 Identities=25% Similarity=0.399 Sum_probs=39.4 Q ss_pred EEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHH Q ss_conf 99878852562079999999996598399995723767624446875168752565653312332111000121101355 Q gi|254781097|r 8 LLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLR 87 (369) Q Consensus 8 li~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 87 (369) T Consensus 1 ILItGas-Gfi--G~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~-~~~~~~d----------------l~~~~~~~~ 59 (235) T pfam01370 1 ILVTGGT-GFI--GSALVRRLLQEGYEVIVLGRRRRSESLNTG-RIR-FRFHEGD----------------LTDPDALER 59 (235) T ss_pred EEEECCC-CHH--HHHHHHHHHHCCCEEEEEECCCCHHHHHHC-CCC-CEEEEEE----------------CCCHHHHHH T ss_conf 7997289-799--999999999787989999899730122211-467-6599965----------------889999999 Q ss_pred HHHHCCCCEEEECCCCCC Q ss_conf 542034442431265321 Q gi|254781097|r 88 LIKKLKPNVVVGFGGYHS 105 (369) Q Consensus 88 ii~~~kPDvVi~tGGy~s 105 (369) T Consensus 60 ~~~~~~~D~VihlAa~~~ 77 (235) T pfam01370 60 LLAEVQPDAVIHLAAQSG 77 (235) T ss_pred HHHHCCCCEEEECCCCCC T ss_conf 985389989998977478 |
This family of proteins utilize NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase; InterPro: IPR011848 In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.04 Score=34.33 Aligned_cols=73 Identities=23% Similarity=0.320 Sum_probs=49.3 Q ss_pred EEEEECCCCH--------------HHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHH Q ss_conf 6999878852--------------56207999999999659839999572376762444687516875256565331233 Q gi|254781097|r 6 VILLVAGGTG--------------GHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVF 71 (369) Q Consensus 6 ~ili~~gGTG--------------GHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (369) T Consensus 2 k~LvTsGGTsE~ID~VRSITNHStG~L--GK~IaE~fL~~Gh~VtlvTTK~A~kP~~~-~~Lsi~Eie~~~-------~L 71 (253) T TIGR02114 2 KILVTSGGTSEPIDNVRSITNHSTGGL--GKIIAEKFLAAGHEVTLVTTKRALKPEPQ-LNLSIKEIETVK-------DL 71 (253) T ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCC--HHHHHHHHHHCCCEEEEEECCCCCCCCCC-CCCCEEEECCHH-------HH T ss_conf 368815886366666355123376872--17999999865878978753612188888-886248642778-------99 Q ss_pred HHHHHHCCCCCHHHHHHHHHCCCCEEE Q ss_conf 211100012110135554203444243 Q gi|254781097|r 72 WNSLVILWKAFIASLRLIKKLKPNVVV 98 (369) Q Consensus 72 ~~~l~~~~~~~~~~~~ii~~~kPDvVi 98 (369) T Consensus 72 ~~----------~L~~~v~~kq~d~li 88 (253) T TIGR02114 72 LT----------TLKELVAEKQHDILI 88 (253) T ss_pred HH----------HHHHHCCCCCCCEEE T ss_conf 99----------988750125543888 |
These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This entry describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of IPR005252 from INTERPRO, corresponding to phosphopantothenate--cysteine ligase activity .. |
| >pfam04321 RmlD_sub_bind RmlD substrate binding domain | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.28 Score=28.41 Aligned_cols=63 Identities=25% Similarity=0.409 Sum_probs=37.3 Q ss_pred EEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHH Q ss_conf 99878852562079999999996598399995723767624446875168752565653312332111000121101355 Q gi|254781097|r 8 LLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLR 87 (369) Q Consensus 8 li~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 87 (369) T Consensus 1 ILVtG~~G-fi--Gs~l~~~L~~~g~~v~~~~r~~------------------~---------D-------~~d~~~l~~ 43 (284) T pfam04321 1 ILVTGANG-QL--GRELTRLLAERGVEVVALDRPE------------------L---------D-------LTDPEAVAA 43 (284) T ss_pred EEEECCCC-HH--HHHHHHHHHHCCCEEEEECCCC------------------C---------C-------CCCHHHHHH T ss_conf 69964899-89--9999999986899899954862------------------5---------7-------889999999 Q ss_pred HHHHCCCCEEEECCCCCCHH Q ss_conf 54203444243126532102 Q gi|254781097|r 88 LIKKLKPNVVVGFGGYHSIS 107 (369) Q Consensus 88 ii~~~kPDvVi~tGGy~s~P 107 (369) T Consensus 44 ~~~~~~pd~VihlAa~~~~~ 63 (284) T pfam04321 44 LVREARPDVVVNAAAYTAVD 63 (284) T ss_pred HHHHCCCCEEEECCCCCCCH T ss_conf 99864997999724135556 |
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. |
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.58 Score=26.24 Aligned_cols=80 Identities=14% Similarity=0.207 Sum_probs=37.6 Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH--HH--HHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCC Q ss_conf 769998788525620799999999965983999957237--67--62444687516875256565331233211100012 Q gi|254781097|r 5 NVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRA--RS--FITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWK 80 (369) Q Consensus 5 ~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (369) T Consensus 2 KkILVTGg-~G-F--IGs~Lv~~Ll~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~D----------------i~ 61 (355) T PRK10217 2 RKILITGG-AG-F--IGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVD----------------IC 61 (355) T ss_pred CEEEECCC-CC-H--HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECC----------------CC T ss_conf 96999378-75-7--99999999997699889998289876525444454127871699800----------------58 Q ss_pred CCHHHHHHHHHCCCCEEEECCCCC Q ss_conf 110135554203444243126532 Q gi|254781097|r 81 AFIASLRLIKKLKPNVVVGFGGYH 104 (369) Q Consensus 81 ~~~~~~~ii~~~kPDvVi~tGGy~ 104 (369) T Consensus 62 d~~~l~~~~~~~~pD~ViHlAa~~ 85 (355) T PRK10217 62 DRAELARVFTEYQPDCVMHLAAES 85 (355) T ss_pred CHHHHHHHHHHCCCCEEEEECCCC T ss_conf 899999999861998899942422 |
|
| >PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.9 Score=24.90 Aligned_cols=82 Identities=23% Similarity=0.378 Sum_probs=43.1 Q ss_pred CCEEEEECCCC-----HH-HHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCC-CCCCEEEEECCCCCCCCHHHHHHHHH Q ss_conf 87699987885-----25-6207999999999659839999572376762444-68751687525656533123321110 Q gi|254781097|r 4 NNVILLVAGGT-----GG-HVFPAVALSHELKNRGYAVYLITDRRARSFITDF-PADSIYEIVSSQVRFSNPFVFWNSLV 76 (369) Q Consensus 4 ~~~ili~~gGT-----GG-Hi~palala~~L~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~ 76 (369) T Consensus 7 ikkvLviGsGp~~IGqa~EfDysg~qa~~al~e~g~~vilvN~NpaTv-~Td~~~ad~vY~ePl---------------- 69 (1063) T PRK05294 7 IKKILIIGSGPIVIGQACEFDYSGTQACKALREEGYRVVLVNSNPATI-MTDPEMADATYIEPI---------------- 69 (1063) T ss_pred CCEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH-CCCCCCCCEEEECCC---------------- T ss_conf 788999898825103723326569999999998699899987985441-078776643787279---------------- Q ss_pred HCCCCCHHHHHHHHHCCCCEEE-ECCCCCCH Q ss_conf 0012110135554203444243-12653210 Q gi|254781097|r 77 ILWKAFIASLRLIKKLKPNVVV-GFGGYHSI 106 (369) Q Consensus 77 ~~~~~~~~~~~ii~~~kPDvVi-~tGGy~s~ 106 (369) T Consensus 70 ----t~e~v~~Ii~~E~Pd~il~~~GGQtaL 96 (1063) T PRK05294 70 ----TPEFVEKIIEKERPDAILPTMGGQTAL 96 (1063) T ss_pred ----CHHHHHHHHHHHCCCEEEECCCCHHHH T ss_conf ----899999999975999788667780599 |
|
| >TIGR01137 cysta_beta cystathionine beta-synthase; InterPro: IPR005857 This model discriminates cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain from cysteine synthases | Back alignment and domain information |
|---|
Probab=91.58 E-value=0.66 Score=25.84 Aligned_cols=87 Identities=20% Similarity=0.248 Sum_probs=46.4 Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHH-HCCCEEEEEE-CHHHHHHHCC----CCCCCEEEEECCCCCCCCHHHHHHHHH Q ss_conf 887699987885256207999999999-6598399995-7237676244----468751687525656533123321110 Q gi|254781097|r 3 ENNVILLVAGGTGGHVFPAVALSHELK-NRGYAVYLIT-DRRARSFITD----FPADSIYEIVSSQVRFSNPFVFWNSLV 76 (369) Q Consensus 3 ~~~~ili~~gGTGGHi~palala~~L~-~~g~~v~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~ 76 (369) T Consensus 178 dk~~~~VAg~GTGGTIt---Gi~ryLK~~~~~~~~ivGaDP~GSila~pE~LN~t~~t~Y~VEGiGyDF~P-~vlDR~v~ 253 (527) T TIGR01137 178 DKLDMFVAGVGTGGTIT---GIARYLKDESNPKVRIVGADPEGSILAQPEELNKTGRTPYKVEGIGYDFIP-TVLDRKVV 253 (527) T ss_pred CCCCEEEECCCCCCHHH---HHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCCCCCCCEEEEEECCCCCC-CCCCCCCC T ss_conf 12117885057883155---455654321389338998769853321764655578983148762147768-52376525 Q ss_pred -HCC-----CCCHHHHHHHHHCC Q ss_conf -001-----21101355542034 Q gi|254781097|r 77 -ILW-----KAFIASLRLIKKLK 93 (369) Q Consensus 77 -~~~-----~~~~~~~~ii~~~k 93 (369) T Consensus 254 D~w~k~~D~~SF~maRrLi~eEG 276 (527) T TIGR01137 254 DEWIKTDDKESFKMARRLIKEEG 276 (527) T ss_pred CEEEEECCHHHHHHHHHHHHHCC T ss_conf 44688088168999999987447 |
Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid - the function of many of these enzymes is unproven.; GO: 0004122 cystathionine beta-synthase activity, 0019343 cysteine biosynthetic process via cystathionine, 0005737 cytoplasm. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=90.52 E-value=1.4 Score=23.57 Aligned_cols=78 Identities=17% Similarity=0.243 Sum_probs=37.5 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH-----HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCC Q ss_conf 69998788525620799999999965983999957237-----6762444687516875256565331233211100012 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRA-----RSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWK 80 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (369) T Consensus 2 kILVTG-g~G-FI--Gs~l~~~Ll~~~~~~v~~vd~~~~~~~~~~~-~~~~~~~~~~~~~~D----------------i~ 60 (352) T PRK10084 2 KILVTG-GAG-FI--GSAVVRHIINNTQDSVVNVDKLTYAGNLESL-ADVSDSERYVFEHAD----------------IC 60 (352) T ss_pred EEEEEC-CHH-HH--HHHHHHHHHHCCCCEEEEEECCCCCCCHHHH-HHHHCCCCCEEEECC----------------CC T ss_conf 799975-100-89--9999999997799889998479876778888-876308971799856----------------78 Q ss_pred CCHHHHHHHHHCCCCEEEECCCCC Q ss_conf 110135554203444243126532 Q gi|254781097|r 81 AFIASLRLIKKLKPNVVVGFGGYH 104 (369) Q Consensus 81 ~~~~~~~ii~~~kPDvVi~tGGy~ 104 (369) T Consensus 61 d~~~l~~~~~~~~~D~ViHlAA~~ 84 (352) T PRK10084 61 DRAELDRIFAQHQPDAVMHLAAES 84 (352) T ss_pred CHHHHHHHHHHHCCCEEEECCCCC T ss_conf 999999999973999999977346 |
|
| >PRK00313 lpxK tetraacyldisaccharide 4'-kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.071 Score=32.60 Aligned_cols=33 Identities=24% Similarity=0.332 Sum_probs=26.2 Q ss_pred ECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH Q ss_conf 8788525620799999999965983999957237 Q gi|254781097|r 10 VAGGTGGHVFPAVALSHELKNRGYAVYLITDRRA 43 (369) Q Consensus 10 ~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~ 43 (369) T Consensus 60 tvGGT-GKTP~v~~La~~L~~~G~~~~IiSRGYg 92 (332) T PRK00313 60 TVGGT-GKTPLILWLIEHCRRRGLRVGVVSRGYG 92 (332) T ss_pred EECCC-CHHHHHHHHHHHHHHCCCCEEEEECCCC T ss_conf 35887-7779999999999977996589864656 |
|
| >TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit; InterPro: IPR006275 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.026 Score=35.64 Aligned_cols=35 Identities=26% Similarity=0.543 Sum_probs=22.9 Q ss_pred CCEEEEECCCC---H-H--HHHHHHHHHHHHHHCCCEEEEE Q ss_conf 87699987885---2-5--6207999999999659839999 Q gi|254781097|r 4 NNVILLVAGGT---G-G--HVFPAVALSHELKNRGYAVYLI 38 (369) Q Consensus 4 ~~~ili~~gGT---G-G--Hi~palala~~L~~~g~~v~~~ 38 (369) T Consensus 573 Kk~~lvlGSGp~RIGqgvEFDYc~Vh~~~aLr~~Gye~Imi 613 (1089) T TIGR01369 573 KKKVLVLGSGPNRIGQGVEFDYCCVHAVLALREAGYETIMI 613 (1089) T ss_pred CCEEEEECCCCEECCCCEEEHHHHHHHHHHHHHCCCEEEEE T ss_conf 85689987845140663120567899999998729959999 |
CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates , . CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate . The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain . CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites . The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein . The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP . There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia . CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains . This entry represents glutamine-dependent CPSase (6.3.5.5 from EC) from prokaryotes and eukaryotes (CPSase II). ; GO: 0004086 carbamoyl-phosphate synthase activity, 0006807 nitrogen compound metabolic process. |
| >PRK07208 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.11 Score=31.15 Aligned_cols=32 Identities=25% Similarity=0.593 Sum_probs=26.5 Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEE Q ss_conf 8876999878852562079999999996598399995 Q gi|254781097|r 3 ENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLIT 39 (369) Q Consensus 3 ~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~ 39 (369) T Consensus 2 ~~kkv~IiGAG~~-----GL~aA~~L~~~g~~v~vlE 33 (474) T PRK07208 2 EKKSVVIIGAGPA-----GLTAAYELVKRGYPVTILE 33 (474) T ss_pred CCCEEEEECCCHH-----HHHHHHHHHHCCCCEEEEE T ss_conf 9875999897689-----9999999986899759997 |
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.45 E-value=0.21 Score=29.27 Aligned_cols=37 Identities=22% Similarity=0.431 Sum_probs=32.3 Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 9988769998788525620799999999965983999957 Q gi|254781097|r 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITD 40 (369) Q Consensus 1 M~~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~ 40 (369) T Consensus 1 M~~~~KValVTGgs~GI---G~aia~~la~~Ga~V~i~~~ 37 (259) T PRK12745 1 MKSTRPVALVTGGRRGI---GLGIALALAAGGFDLAINDR 37 (259) T ss_pred CCCCCCEEEEECCCCHH---HHHHHHHHHHCCCEEEEEEC T ss_conf 99999999996867899---99999999987998999979 |
|
| >PRK06847 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.16 Score=30.09 Aligned_cols=34 Identities=29% Similarity=0.559 Sum_probs=29.3 Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEE Q ss_conf 998876999878852562079999999996598399995 Q gi|254781097|r 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLIT 39 (369) Q Consensus 1 M~~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~ 39 (369) T Consensus 1 m~~~kkV~IVGaG~a-----GL~lA~~L~~~Gi~v~V~E 34 (375) T PRK06847 1 MGAVKKVLIVGGGIG-----GMSAAIALRKAGISVDLVE 34 (375) T ss_pred CCCCCEEEEECCCHH-----HHHHHHHHHHCCCCEEEEE T ss_conf 989987999996689-----9999999996799999990 |
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.45 Score=26.97 Aligned_cols=38 Identities=26% Similarity=0.482 Sum_probs=29.6 Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH Q ss_conf 9988769998788525620799999999965983999957237 Q gi|254781097|r 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRA 43 (369) Q Consensus 1 M~~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~ 43 (369) T Consensus 1 M~m~K~vlITGassG-I---G~alA~~la~~G~~V~~~-~R~~ 38 (277) T PRK05993 1 MDMKRSILITGCSSG-I---GAYCAHALQKRGWRVFAT-CRKP 38 (277) T ss_pred CCCCCEEEEECCCCH-H---HHHHHHHHHHCCCEEEEE-ECCH T ss_conf 999868999256869-9---999999999879999999-7999 |
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.62 E-value=0.31 Score=28.09 Aligned_cols=39 Identities=28% Similarity=0.442 Sum_probs=28.7 Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHH Q ss_conf 99887699987885256207999999999659839999572376 Q gi|254781097|r 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRAR 44 (369) Q Consensus 1 M~~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~ 44 (369) T Consensus 1 M~~~KvalITGass-GI---G~a~A~~la~~G~~V~~~-~r~~~ 39 (270) T PRK06179 1 MSNKKVALVTGASS-GI---GRATAEALARAGYRVFGT-SRNPA 39 (270) T ss_pred CCCCCEEEEECCCC-HH---HHHHHHHHHHCCCEEEEE-ECCHH T ss_conf 98995899907246-99---999999999879999999-68977 |
|
| >PRK07236 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.33 E-value=0.24 Score=28.92 Aligned_cols=33 Identities=24% Similarity=0.483 Sum_probs=27.0 Q ss_pred CCC--CCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEE Q ss_conf 998--87699987885256207999999999659839999 Q gi|254781097|r 1 MSE--NNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLI 38 (369) Q Consensus 1 M~~--~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~ 38 (369) T Consensus 1 ~~~~~~~kV~IVGaGiaG-----L~~A~~L~~~G~~v~v~ 35 (386) T PRK07236 1 MTHMSKPRAVVVGGSLGG-----LFAANLLRRAGWDVDVF 35 (386) T ss_pred CCCCCCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEE T ss_conf 998999968999936899-----99999998589998998 |
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.37 Score=27.61 Aligned_cols=38 Identities=24% Similarity=0.228 Sum_probs=29.4 Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH Q ss_conf 9988769998788525620799999999965983999957237 Q gi|254781097|r 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRA 43 (369) Q Consensus 1 M~~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~ 43 (369) T Consensus 1 M~~~KvvlITGass-GI---G~aiA~~l~~~G~~Vi~~~-R~~ 38 (277) T PRK06180 1 MASMKTWLITGVSS-GF---GRALAQAALAAGHRVVGTV-RSA 38 (277) T ss_pred CCCCCEEEECCCCC-HH---HHHHHHHHHHCCCEEEEEE-CCH T ss_conf 99998899917873-99---9999999998799999998-999 |
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=91.91 E-value=0.46 Score=26.94 Aligned_cols=39 Identities=18% Similarity=0.227 Sum_probs=31.2 Q ss_pred CCEEEEECCCCHHHHHH------------HHHHHHHHHHCCCEEEEEECHH Q ss_conf 87699987885256207------------9999999996598399995723 Q gi|254781097|r 4 NNVILLVAGGTGGHVFP------------AVALSHELKNRGYAVYLITDRR 42 (369) Q Consensus 4 ~~~ili~~gGTGGHi~p------------alala~~L~~~g~~v~~~~~~~ 42 (369) T Consensus 3 GkkVLITaG~T~E~IDpVR~ItN~SSGkmG~aiA~~a~~~GA~Vtli~g~~ 53 (229) T PRK09620 3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYF 53 (229) T ss_pred CCEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEEECCC T ss_conf 989999588875666884562776823999999999997799799994588 |
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.87 E-value=0.48 Score=26.78 Aligned_cols=37 Identities=22% Similarity=0.360 Sum_probs=28.2 Q ss_pred CCC-CCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 998-8769998788525620799999999965983999957 Q gi|254781097|r 1 MSE-NNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITD 40 (369) Q Consensus 1 M~~-~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~ 40 (369) T Consensus 1 m~~~~~KvalVTGa~~GI---G~aia~~la~~Ga~V~i~~~ 38 (252) T PRK06947 1 MTNSDRKVVLITGASRGI---GRATAVLAAARGWSVGINYA 38 (252) T ss_pred CCCCCCCEEEEECCCCHH---HHHHHHHHHHCCCEEEEEEC T ss_conf 999999089993883589---99999999987998999808 |
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=91.62 E-value=1.1 Score=24.27 Aligned_cols=30 Identities=20% Similarity=0.391 Sum_probs=21.0 Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEE Q ss_conf 6999878852562079999999996598399995 Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRGYAVYLIT 39 (369) Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g~~v~~~~ 39 (369) T Consensus 2 kvLVTG-g~G-FI--Gs~l~~~Ll~~g~~V~~~d 31 (338) T PRK10675 2 RVLVTG-GSG-YI--GSHTCVQLLQNGHDVVILD 31 (338) T ss_pred EEEEEC-CCC-HH--HHHHHHHHHHCCCEEEEEE T ss_conf 199989-876-79--9999999997849899998 |
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.41 E-value=0.47 Score=26.84 Aligned_cols=36 Identities=36% Similarity=0.542 Sum_probs=28.8 Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEE Q ss_conf 998876999878852562079999999996598399995 Q gi|254781097|r 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLIT 39 (369) Q Consensus 1 M~~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~ 39 (369) T Consensus 1 M~~~GKvalITGas~GI---G~aiA~~la~~Ga~V~i~~ 36 (235) T PRK07326 1 MSGNGKAALVTGGSKGI---GFAVAEALAAAGYRVAICA 36 (235) T ss_pred CCCCCCEEEEECCCCHH---HHHHHHHHHHCCCEEEEEE T ss_conf 99999899993826799---9999999998799999998 |
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.11 E-value=0.57 Score=26.28 Aligned_cols=37 Identities=27% Similarity=0.498 Sum_probs=29.8 Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 9988769998788525620799999999965983999957 Q gi|254781097|r 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITD 40 (369) Q Consensus 1 M~~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~ 40 (369) T Consensus 1 M~~sgK~alVTGgs~GI---G~aia~~la~~Ga~V~i~~~ 37 (245) T PRK12937 1 MTDSNKVAIVTGASRGI---GAAIARRLAADGFAVAVNYA 37 (245) T ss_pred CCCCCCEEEEECCCCHH---HHHHHHHHHHCCCEEEEECC T ss_conf 99999889994857789---99999999987999999769 |
|
| >PRK01906 tetraacyldisaccharide 4'-kinase; Provisional | Back alignment and domain information |
|---|
Probab=90.87 E-value=0.4 Score=27.35 Aligned_cols=34 Identities=24% Similarity=0.430 Sum_probs=26.2 Q ss_pred ECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHH Q ss_conf 87885256207999999999659839999572376 Q gi|254781097|r 10 VAGGTGGHVFPAVALSHELKNRGYAVYLITDRRAR 44 (369) Q Consensus 10 ~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~ 44 (369) T Consensus 65 tvGGT-GKTP~vi~L~~~L~~~G~k~~IlSRGYg~ 98 (339) T PRK01906 65 TVGGT-GKTPTVIALVDALRAAGFTPGVVSRGYGA 98 (339) T ss_pred EECCC-CHHHHHHHHHHHHHHCCCCEEEEECCCCC T ss_conf 76887-57799999999999769955998546455 |
|
| >PRK08163 salicylate hydroxylase; Provisional | Back alignment and domain information |
|---|
Probab=90.80 E-value=0.5 Score=26.68 Aligned_cols=34 Identities=32% Similarity=0.562 Sum_probs=29.9 Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEE Q ss_conf 998876999878852562079999999996598399995 Q gi|254781097|r 1 MSENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLIT 39 (369) Q Consensus 1 M~~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~ 39 (369) T Consensus 1 M~~~~~V~IVGaGia-----GL~lA~~L~r~Gi~v~V~E 34 (396) T PRK08163 1 MTHVTPVLIVGGGIG-----GLAAALALARQGIKVKLLE 34 (396) T ss_pred CCCCCEEEEECCCHH-----HHHHHHHHHHCCCCEEEEC T ss_conf 989984999897889-----9999999997899999991 |
|
| >pfam04127 DFP DNA / pantothenate metabolism flavoprotein | Back alignment and domain information |
|---|
Probab=90.66 E-value=0.48 Score=26.83 Aligned_cols=40 Identities=28% Similarity=0.428 Sum_probs=30.9 Q ss_pred CCCEEEEECCCCHHHHH------------HHHHHHHHHHHCCCEEEEEECHH Q ss_conf 88769998788525620------------79999999996598399995723 Q gi|254781097|r 3 ENNVILLVAGGTGGHVF------------PAVALSHELKNRGYAVYLITDRR 42 (369) Q Consensus 3 ~~~~ili~~gGTGGHi~------------palala~~L~~~g~~v~~~~~~~ 42 (369) T Consensus 1 kgk~vlITaG~T~E~ID~VR~ItN~SSGkmG~alA~~~~~~Ga~V~li~g~~ 52 (197) T pfam04127 1 KGRRVLVTSGGTREPIDPVRFISNFSSGKMGAAIAEEFLKRGADVTLIAGKG 52 (197) T ss_pred CCCEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEECCC T ss_conf 9989999368864443883153626955999999999997899389972356 |
The DNA/pantothenate metabolism flavoprotein (EC:4.1.1.36) affects synthesis of DNA, and pantothenate metabolism. |
| >pfam01075 Glyco_transf_9 Glycosyltransferase family 9 (heptosyltransferase) | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.29 Score=28.31 Aligned_cols=96 Identities=15% Similarity=0.182 Sum_probs=48.9 Q ss_pred CEEEEEECCCCC-CCHH-HHHHHHHHHHHHHCCCCCEEEEEECCCCHHH-HHHHH-HHCCCCC-CCCCC--CCCCHHHHH Q ss_conf 148986304322-2102-3334454432320246606776202551677-65322-1001111-34544--445144430 Q gi|254781097|r 186 FHLLVFGGSQGA-KVFS-DIVPKSIALIPEMQRKRLVIMQQVREDDKEK-VQKQY-DELGCKA-TLACF--FKDIERYIV 258 (369) Q Consensus 186 ~~ILv~GGS~Ga-~~ln-~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~-~~~~~-~~~~~~~-~v~~f--~~~m~~~~~ 258 (369) T Consensus 108 ~~i~i~pga~~~~K~Wp~e~f~~L~~~l~~~---~~~vvl~gg~~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali~ 184 (249) T pfam01075 108 PYIAFCPGASRPAKRWPAEHFAELAQALQER---GWQVVLFGGAEDREEEIAKRLAAGLRTPCVNLLGKTSLEQAAALLA 184 (249) T ss_pred CEEEEECCCCCCCCCCCHHHHHHHHHHHHHC---CCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH T ss_conf 9899973878856779999999999999966---9956997386789999999998638998686269999999999998 Q ss_pred CCCEEEECCCCHHHHHHHHHCCCEEEE Q ss_conf 044899725420233345529604875 Q gi|254781097|r 259 EANLLICRSGALTVSEIAVIGRPAILV 285 (369) Q Consensus 259 ~aDlvIsraG~~Ti~E~~~~g~P~IlI 285 (369) T Consensus 185 ~a~l~I~n-DSGp~HiAaA~g~Pti~i 210 (249) T pfam01075 185 GADLVVGN-DSGLMHLAAALDRPVIGL 210 (249) T ss_pred HCCEEEEC-CCHHHHHHHHCCCCEEEE T ss_conf 50668857-985999999839988999 |
Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core. |
| >KOG0832 consensus | Back alignment and domain information |
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Probab=94.90 E-value=0.039 Score=34.39 Aligned_cols=25 Identities=20% Similarity=0.347 Sum_probs=17.7 Q ss_pred CEEEE-CC--CCHHHHHHHHHCCCEEEE Q ss_conf 48997-25--420233345529604875 Q gi|254781097|r 261 NLLIC-RS--GALTVSEIAVIGRPAILV 285 (369) Q Consensus 261 DlvIs-ra--G~~Ti~E~~~~g~P~IlI 285 (369) T Consensus 175 D~vvvln~~e~~sAilEA~K~~IPTIgI 202 (251) T KOG0832 175 DLVVVLNPEENHSAILEAAKMAIPTIGI 202 (251) T ss_pred CEEEECCCCCCCHHHHHHHHHCCCEEEE T ss_conf 6267627544318999999707985888 |
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| >PRK05299 rpsB 30S ribosomal protein S2; Provisional | Back alignment and domain information |
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Probab=92.47 E-value=0.39 Score=27.44 Aligned_cols=17 Identities=24% Similarity=0.516 Sum_probs=13.3 Q ss_pred CHHHHHHHHHCCCEEEE Q ss_conf 20233345529604875 Q gi|254781097|r 269 ALTVSEIAVIGRPAILV 285 (369) Q Consensus 269 ~~Ti~E~~~~g~P~IlI 285 (369) T Consensus 170 ~~AV~EA~kl~IPvI~i 186 (255) T PRK05299 170 HIAVKEARKLGIPVVAI 186 (255) T ss_pred HHHHHHHHHCCCCEEEE T ss_conf 79999999759988876 |
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| >TIGR01011 rpsB_bact ribosomal protein S2; InterPro: IPR005706 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms | Back alignment and domain information |
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Probab=91.93 E-value=1 Score=24.58 Aligned_cols=14 Identities=29% Similarity=0.529 Sum_probs=8.7 Q ss_pred HHHHHHHHCCCEEE Q ss_conf 23334552960487 Q gi|254781097|r 271 TVSEIAVIGRPAIL 284 (369) Q Consensus 271 Ti~E~~~~g~P~Il 284 (369) T Consensus 172 Av~EA~kLgIPvvA 185 (227) T TIGR01011 172 AVAEARKLGIPVVA 185 (227) T ss_pred HHHHHHHCCCCEEE T ss_conf 99997337997898 |
The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites , . About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many of ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome , . This family describes the bacterial, mitochondrial and chloroplast forms of ribosomal protein S2.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0015935 small ribosomal subunit. |
| >cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit | Back alignment and domain information |
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