HHsearch alignment for GI: 254781097 and conserved domain: COG0763
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane].
Probab=99.75 E-value=8e-16 Score=130.16 Aligned_cols=345 Identities=15% Similarity=0.122 Sum_probs=208.5
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHH
Q ss_conf 76999878852562079999999996598399995723767624446875168752565653312332111000121101
Q gi|254781097|r 5 NVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIA 84 (369)
Q Consensus 5 ~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (369)
T Consensus 2 ~ki~i~AGE~SGDll-Ga~LikaLk~~~~~~efvGvgG~~m~aeG~--~sl~~--~~elsvmGf~EVL~~lp~llk~~~~ 76 (381)
T COG0763 2 LKIALSAGEASGDLL-GAGLIKALKARYPDVEFVGVGGEKMEAEGL--ESLFD--MEELSVMGFVEVLGRLPRLLKIRRE 76 (381)
T ss_pred CEEEEEECCCCHHHH-HHHHHHHHHHHCCCEEEEEECCHHHHHCCC--CCCCC--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 459999044431146-899999998638983899817678886557--65558--8998782299999988999999999
Q ss_pred HHHHHHHCCCCEEEECCCCCCHHHHHHHHH--CC--CCCEEECCCCC----CHHHHHHHHHHHHHHHCCCCCCCCCC--C
Q ss_conf 355542034442431265321024788862--34--11012215320----01567788999998741343222235--5
Q gi|254781097|r 85 SLRLIKKLKPNVVVGFGGYHSISPLLAGMI--LR--IPSMVHEQNVI----MGKANRLLSWGVQIIARGLVSSQKKV--L 154 (369)
Q Consensus 85 ~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~--l~--iP~vihEqN~v----~G~~nk~l~~~a~~v~~~~~~~~~~~--~ 154 (369)
T Consensus 77 ~~~~i~~~kpD~~i~ID-sPdFnl~vak~lrk~~p~i~iihYV~PsVWAWr~~Ra~-~i~~~~D~lLailPFE~~~y~k~ 154 (381)
T COG0763 77 LVRYILANKPDVLILID-SPDFNLRVAKKLRKAGPKIKIIHYVSPSVWAWRPKRAV-KIAKYVDHLLAILPFEPAFYDKF 154 (381)
T ss_pred HHHHHHHCCCCEEEEEC-CCCCCHHHHHHHHHHCCCCCEEEEECCCEEEECHHHHH-HHHHHHHHEEEECCCCHHHHHHC
T ss_conf 99999855998899967-89886499999997089998699978530565521689-99997617214367788999855
Q ss_pred CCCCEEEECCCCHHHH--HHHHHHHHHHCC-CCCCEEEEEECCCCCCC--HHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 6673253044432456--543334433114-47814898630432221--023334454432320246606776202551
Q gi|254781097|r 155 LRKIIVTGNPIRSSLI--KMKDIPYQSSDL-DQPFHLLVFGGSQGAKV--FSDIVPKSIALIPEMQRKRLVIMQQVREDD 229 (369)
Q Consensus 155 ~~k~~~~G~PvR~~~~--~~~~~~~~~~~~-~~~~~ILv~GGS~Ga~~--ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~ 229 (369)
T Consensus 155 g~~~~yVGHpl~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~-~~~~~~~vlp~~~~~ 233 (381)
T COG0763 155 GLPCTYVGHPLADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKA-RYPDLKFVLPLVNAK 233 (381)
T ss_pred CCCEEEECCHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH-HCCCCEEEEECCCHH
T ss_conf 9970896780564234434578999982899778769981688588999877899999999986-589965999568478
Q ss_pred HHHHHHHHHHCC---CCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 677653221001---11134544445144430044899725420233345529604875335524898999899999889
Q gi|254781097|r 230 KEKVQKQYDELG---CKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGG 306 (369)
Q Consensus 230 ~~~~~~~~~~~~---~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G 306 (369)
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~aD~al~aSGT~tL-E~aL~g~P~Vv~-Yk--~~~it~~iak~lvk~~ 307 (381)
T COG0763 234 YRRIIEEALKWEVAGLSLILID--GEKRKAFAAADAALAASGTATL-EAALAGTPMVVA-YK--VKPITYFIAKRLVKLP 307 (381)
T ss_pred HHHHHHHHHHCCCCCCEEEEEC--CHHHHHHHHHHHHHHHCCHHHH-HHHHHCCCEEEE-EE--CCHHHHHHHHHHCCCC
T ss_conf 8999999862334576078407--4578999984189984467999-999829997999-94--4588999999861677
Q ss_pred CEE---------EE---EHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC---CCCH-HHHHHHHHHHHHHH
Q ss_conf 889---------98---0001998999999999861899999999999852---7832-79999999999998
Q gi|254781097|r 307 GAK---------VI---TENFLSPERLAEELCSAMKKPSCLVQMAKQVSMK---GKPQ-AVLMLSDLVEKLAH 363 (369)
Q Consensus 307 ~a~---------~i---~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~---~~~~-aa~~i~~~i~~la~ 363 (369)
T Consensus 308 yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl~~~~ 380 (381)
T COG0763 308 YVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQAVLELLL 380 (381)
T ss_pred CCCCHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
T ss_conf 2443688618730467775316999999999998348676999999999999997589688999999998741