HHsearch alignment for GI: 254781097 and conserved domain: PRK00025
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed.
Probab=99.92 E-value=6.2e-22 Score=172.88 Aligned_cols=349 Identities=16% Similarity=0.180 Sum_probs=223.0
Q ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCH
Q ss_conf 87699987885256207999999999659839999572376762444687516875256565331233211100012110
Q gi|254781097|r 4 NNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFI 83 (369)
Q Consensus 4 ~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (369)
T Consensus 1 ~mkifi~aGE~SGD~~-ga~li~~Lk~~~~~~~~~GiGG~~M~~~G~--~~l~d~--~~l~vmG~~evl~~~~~~~~~~~ 75 (382)
T PRK00025 1 PLRIAIVAGEVSGDLL-GAGLIRALKAQAPNLEFVGIGGPRMEAAGF--ESLFDM--EELAVMGLVEVLPRLPRLLKIRK 75 (382)
T ss_pred CCEEEEEECCCCHHHH-HHHHHHHHHHHCCCCEEEEECCHHHHHCCC--CCCCCH--HHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 9489999068418899-999999998319896799988299997699--544775--78313019999977999999999
Q ss_pred HHHHHHHHCCCCEEEECCCCCCHHHHHHHHH--C--CCCCEEECC-CCC---CHHHHHHHHHHHHHHHCCCCCCCCCCC-
Q ss_conf 1355542034442431265321024788862--3--411012215-320---015677889999987413432222355-
Q gi|254781097|r 84 ASLRLIKKLKPNVVVGFGGYHSISPLLAGMI--L--RIPSMVHEQ-NVI---MGKANRLLSWGVQIIARGLVSSQKKVL- 154 (369)
Q Consensus 84 ~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~--l--~iP~vihEq-N~v---~G~~nk~l~~~a~~v~~~~~~~~~~~~- 154 (369)
T Consensus 76 ~~~~~i~~~~Pd~vi~I-D~pgFnlrlak~lkk~~~~ipvi~yv~PqvWAWr~~R~-k~~~~~~D~ll~ifPFE~~~f~~ 153 (382)
T PRK00025 76 ELKRLLLAEPPDVFILI-DAPDFNLRLAKKLKKALPGIPIIHYVSPSVWAWRPGRA-KKIAKATDHVLAILPFEAAFYDK 153 (382)
T ss_pred HHHHHHHHCCCCEEEEE-CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCHH-HHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 99999986499999997-78306599999999716999889994715654064189-99999998761087656899986
Q ss_pred -CCCCEEEECCCCHHHHHHH--HHHHHHHCC-CCCCEEEEEECCCCCCCHHHHHH---HHHHHHHHHCCCCCEEEEEE-C
Q ss_conf -6673253044432456543--334433114-47814898630432221023334---45443232024660677620-2
Q gi|254781097|r 155 -LRKIIVTGNPIRSSLIKMK--DIPYQSSDL-DQPFHLLVFGGSQGAKVFSDIVP---KSIALIPEMQRKRLVIMQQV-R 226 (369)
Q Consensus 155 -~~k~~~~G~PvR~~~~~~~--~~~~~~~~~-~~~~~ILv~GGS~Ga~~ln~~v~---~~~~~l~~~~~~~~~v~~~~-g 226 (369)
T Consensus 154 ~g~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~i~lLPGSR~~EI-~~~lPi~l~a~~~l~~~-~p~~~fvip~~~ 231 (382)
T PRK00025 154 LGVPVTYVGHPLADEIPLEPDRAAARAELGLDPDARVLALLPGSRGSEI-KRLLPTFLEAAQLLQQR-YPDLRFVVPLAN 231 (382)
T ss_pred CCCCCEECCCCHHHHCCCCCCHHHHHHHCCCCCCCCEEEEECCCCHHHH-HHHHHHHHHHHHHHHHH-CCCEEEEEECCC
T ss_conf 5998135698156432235687999987399855661787058858999-99789999999999987-899399995588
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 55167765322100111134544445144430044899725420233345529604875335524898999899999889
Q gi|254781097|r 227 EDDKEKVQKQYDELGCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGG 306 (369)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G 306 (369)
T Consensus 232 ~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~l~~sd~ai~~SGTaTL-E~al~~~P~Vv~-Yk~~~l--t~~i~k~lvkv~ 307 (382)
T PRK00025 232 PKRREQFEQLLAEYAPDLSVTLLDGQAREAMAAADAALAASGTVTL-EAALLGVPMVVG-YKVKPL--TFWIAKRLVKVP 307 (382)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCEEEECCCHHHH-HHHHHCCCEEEE-EECCHH--HHHHHHHHHCCC
T ss_conf 7789999999984799983898268417788738887653777999-999971985899-807899--999999965699
Q ss_pred CEEE------------EEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8899------------80001998999999999861899999999999----852783279999999999998555
Q gi|254781097|r 307 GAKV------------ITENFLSPERLAEELCSAMKKPSCLVQMAKQV----SMKGKPQAVLMLSDLVEKLAHVKV 366 (369)
Q Consensus 307 ~a~~------------i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~----~~~~~~~aa~~i~~~i~~la~~k~ 366 (369)
T Consensus 308 ~isL~Nii~~k~ivPEllQ~~~~~~~i~~~~~~ll~d~~~~~~~~~~~~~lr~~L-~~gas~raA~~Il~~l~~~~ 382 (382)
T PRK00025 308 YISLPNLLAGEELVPELLQEEATPEKLARALLELLADGARRQALLEGFTELHQYL-RCGAAERAAQAVLELLKQRK 382 (382)
T ss_pred EEEHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHCC
T ss_conf 7652487549976613405669999999999999669999999999999999985-78999999999999997369