HHsearch alignment for GI: 254781097 and conserved domain: PRK00025

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed.
Probab=99.92  E-value=6.2e-22  Score=172.88  Aligned_cols=349  Identities=16%  Similarity=0.180  Sum_probs=223.0

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCH
Q ss_conf             87699987885256207999999999659839999572376762444687516875256565331233211100012110
Q gi|254781097|r    4 NNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFI   83 (369)
Q Consensus         4 ~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~   83 (369)
T Consensus         1 ~mkifi~aGE~SGD~~-ga~li~~Lk~~~~~~~~~GiGG~~M~~~G~--~~l~d~--~~l~vmG~~evl~~~~~~~~~~~   75 (382)
T PRK00025          1 PLRIAIVAGEVSGDLL-GAGLIRALKAQAPNLEFVGIGGPRMEAAGF--ESLFDM--EELAVMGLVEVLPRLPRLLKIRK   75 (382)
T ss_pred             CCEEEEEECCCCHHHH-HHHHHHHHHHHCCCCEEEEECCHHHHHCCC--CCCCCH--HHHHHCCHHHHHHHHHHHHHHHH
T ss_conf             9489999068418899-999999998319896799988299997699--544775--78313019999977999999999


Q ss_pred             HHHHHHHHCCCCEEEECCCCCCHHHHHHHHH--C--CCCCEEECC-CCC---CHHHHHHHHHHHHHHHCCCCCCCCCCC-
Q ss_conf             1355542034442431265321024788862--3--411012215-320---015677889999987413432222355-
Q gi|254781097|r   84 ASLRLIKKLKPNVVVGFGGYHSISPLLAGMI--L--RIPSMVHEQ-NVI---MGKANRLLSWGVQIIARGLVSSQKKVL-  154 (369)
Q Consensus        84 ~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~--l--~iP~vihEq-N~v---~G~~nk~l~~~a~~v~~~~~~~~~~~~-  154 (369)
T Consensus        76 ~~~~~i~~~~Pd~vi~I-D~pgFnlrlak~lkk~~~~ipvi~yv~PqvWAWr~~R~-k~~~~~~D~ll~ifPFE~~~f~~  153 (382)
T PRK00025         76 ELKRLLLAEPPDVFILI-DAPDFNLRLAKKLKKALPGIPIIHYVSPSVWAWRPGRA-KKIAKATDHVLAILPFEAAFYDK  153 (382)
T ss_pred             HHHHHHHHCCCCEEEEE-CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCHH-HHHHHHHHHHHCCCCCCHHHHHH
T ss_conf             99999986499999997-78306599999999716999889994715654064189-99999998761087656899986


Q ss_pred             -CCCCEEEECCCCHHHHHHH--HHHHHHHCC-CCCCEEEEEECCCCCCCHHHHHH---HHHHHHHHHCCCCCEEEEEE-C
Q ss_conf             -6673253044432456543--334433114-47814898630432221023334---45443232024660677620-2
Q gi|254781097|r  155 -LRKIIVTGNPIRSSLIKMK--DIPYQSSDL-DQPFHLLVFGGSQGAKVFSDIVP---KSIALIPEMQRKRLVIMQQV-R  226 (369)
Q Consensus       155 -~~k~~~~G~PvR~~~~~~~--~~~~~~~~~-~~~~~ILv~GGS~Ga~~ln~~v~---~~~~~l~~~~~~~~~v~~~~-g  226 (369)
T Consensus       154 ~g~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~i~lLPGSR~~EI-~~~lPi~l~a~~~l~~~-~p~~~fvip~~~  231 (382)
T PRK00025        154 LGVPVTYVGHPLADEIPLEPDRAAARAELGLDPDARVLALLPGSRGSEI-KRLLPTFLEAAQLLQQR-YPDLRFVVPLAN  231 (382)
T ss_pred             CCCCCEECCCCHHHHCCCCCCHHHHHHHCCCCCCCCEEEEECCCCHHHH-HHHHHHHHHHHHHHHHH-CCCEEEEEECCC
T ss_conf             5998135698156432235687999987399855661787058858999-99789999999999987-899399995588


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf             55167765322100111134544445144430044899725420233345529604875335524898999899999889
Q gi|254781097|r  227 EDDKEKVQKQYDELGCKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGG  306 (369)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G  306 (369)
T Consensus       232 ~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~l~~sd~ai~~SGTaTL-E~al~~~P~Vv~-Yk~~~l--t~~i~k~lvkv~  307 (382)
T PRK00025        232 PKRREQFEQLLAEYAPDLSVTLLDGQAREAMAAADAALAASGTVTL-EAALLGVPMVVG-YKVKPL--TFWIAKRLVKVP  307 (382)
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCEEEECCCHHHH-HHHHHCCCEEEE-EECCHH--HHHHHHHHHCCC
T ss_conf             7789999999984799983898268417788738887653777999-999971985899-807899--999999965699


Q ss_pred             CEEE------------EEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             8899------------80001998999999999861899999999999----852783279999999999998555
Q gi|254781097|r  307 GAKV------------ITENFLSPERLAEELCSAMKKPSCLVQMAKQV----SMKGKPQAVLMLSDLVEKLAHVKV  366 (369)
Q Consensus       307 ~a~~------------i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~----~~~~~~~aa~~i~~~i~~la~~k~  366 (369)
T Consensus       308 ~isL~Nii~~k~ivPEllQ~~~~~~~i~~~~~~ll~d~~~~~~~~~~~~~lr~~L-~~gas~raA~~Il~~l~~~~  382 (382)
T PRK00025        308 YISLPNLLAGEELVPELLQEEATPEKLARALLELLADGARRQALLEGFTELHQYL-RCGAAERAAQAVLELLKQRK  382 (382)
T ss_pred             EEEHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHCC
T ss_conf             7652487549976613405669999999999999669999999999999999985-78999999999999997369