HHsearch alignment for GI: 254781097 and conserved domain: PRK01021

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed.
Probab=99.78  E-value=5e-16  Score=131.60  Aligned_cols=327  Identities=12%  Similarity=0.123  Sum_probs=193.0

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHH
Q ss_conf             76999878852562079999999996598399995723767624446875168752565653312332111000121101
Q gi|254781097|r    5 NVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIA   84 (369)
Q Consensus         5 ~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~   84 (369)
T Consensus       227 ~~~FI~AGE~SGD~l-Ga~Li~~Lk~~~P~i~F~GVGGp~M~~eGl--~slf~me--~lsVMG~~EVL~~lp~L~~~~~~  301 (607)
T PRK01021        227 TSCFLSAGEASGDTL-GGNLLKEIKALYPDIRCFGVGGPQMRQEGL--EPLFNME--EFQVSGFWEVLLSLFKLYYRYRK  301 (607)
T ss_pred             CCEEEEECCCCHHHH-HHHHHHHHHHHCCCCEEEECCHHHHHHCCC--CCCCCHH--HCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             875799268625577-999999998549898899637799987688--6124467--71011489999889999999999


Q ss_pred             HHHHHHHCCCCEEEECCCCCCHHHHHHHHHC--CC--CCEEECCCC----CCHHHHHHHHHHHHHHHCCCCCCCCCCC--
Q ss_conf             3555420344424312653210247888623--41--101221532----0015677889999987413432222355--
Q gi|254781097|r   85 SLRLIKKLKPNVVVGFGGYHSISPLLAGMIL--RI--PSMVHEQNV----IMGKANRLLSWGVQIIARGLVSSQKKVL--  154 (369)
Q Consensus        85 ~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l--~i--P~vihEqN~----v~G~~nk~l~~~a~~v~~~~~~~~~~~~--  154 (369)
T Consensus       302 l~~~i~~~~PD~~I~I-D~PdFNlrlak~lkk~gi~ik~vhYVsPsVWAWr~~R~-k~i~~~vD~~l~lfPFE~~~~~~~  379 (607)
T PRK01021        302 LYKTILKENPETVICI-DFPDFHFLLIKKLRKCGYKGKIIHYVCPSIWAWRPKRK-TILEKYLDLLLLILPFEQGLFKNS  379 (607)
T ss_pred             HHHHHHHCCCCEEEEE-CCCCCCHHHHHHHHHCCCCCCEEEEECCCEEEECCCHH-HHHHHHHHHHEECCCCCHHHHHCC
T ss_conf             9999986199999995-89987889999999728999868997883688662179-999998867305267788999507


Q ss_pred             CCCCEEEECCCCHHHHHHHHHHH--HHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH--HHCCCCCEEEEEECCCCH
Q ss_conf             66732530444324565433344--33114478148986304322210233344544323--202466067762025516
Q gi|254781097|r  155 LRKIIVTGNPIRSSLIKMKDIPY--QSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIP--EMQRKRLVIMQQVREDDK  230 (369)
Q Consensus       155 ~~k~~~~G~PvR~~~~~~~~~~~--~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~--~~~~~~~~v~~~~g~~~~  230 (369)
T Consensus       380 g~~~~yVGHPl~e~i~~~~~~~~~r~~l~~~~k~IIALLPGSR~SEI-~RlLPI~~~ai~~~~l~~~~~~lV~~a~p~~~  458 (607)
T PRK01021        380 PLRTVYLGHPLVETISNFQPCASWKEQLLPSDKPIVAAFPGSRRGDI-LRNLTIQVQAFLASSLAQTHQLLVSSANPKYD  458 (607)
T ss_pred             CCCCEEECCCCHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHH-HHHHHHHHHHHHHHHCCCCCEEEEECCCHHHH
T ss_conf             99837978960120223477456998617788988999089978999-98749999999987244676499956876688


Q ss_pred             HHHHHHHHHCC-CCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHC----
Q ss_conf             77653221001-1113454444514443004489972542023334552960487533552489899989999988----
Q gi|254781097|r  231 EKVQKQYDELG-CKATLACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEG----  305 (369)
Q Consensus       231 ~~~~~~~~~~~-~~~~v~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~----  305 (369)
T Consensus       459 ~~i~e~l~~~~~~~~~II~-~~~kyeam~aSDaALaASGTATL-E~ALagvPmVVa-YKl--npLTyfIAK~LvKI~lp~  533 (607)
T PRK01021        459 HLILDVLQQEGCLHSKIVP-SQFRYELMRECDCALAKCGTIVL-ETALNQTPTIVT-CQL--RPFDTFLAKYIFKILLPA  533 (607)
T ss_pred             HHHHHHHHHCCCCCCEECC-CHHHHHHHHHCCEEEECCCHHHH-HHHHHCCCEEEE-EEC--CHHHHHHHHHHHHHCCCC
T ss_conf             9999999864898845717-32589999858899888778999-999838898999-967--827999999999725751


Q ss_pred             -C-----CEE-E----E-EHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC
Q ss_conf             -9-----889-9----8-0001998999999999861899999999999852
Q gi|254781097|r  306 -G-----GAK-V----I-TENFLSPERLAEELCSAMKKPSCLVQMAKQVSMK  345 (369)
Q Consensus       306 -G-----~a~-~----i-~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~  345 (369)
T Consensus       534 vsLPNILagr~VVPElI~gQ~D~~PE~iAaAl-~lL~~p~~~ekq~~~c~~~  584 (607)
T PRK01021        534 YSLPNIILGSVIFPEFIGGKKDFHPEEVAAAL-DILKTSQSKEKQKEACRDL  584 (607)
T ss_pred             CCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHCHHHHHHHHHHHHHH
T ss_conf             21130116998666636776658989999999-9871915679999999999