HHsearch alignment for GI: 254781097 and conserved domain: TIGR01137
>TIGR01137 cysta_beta cystathionine beta-synthase; InterPro: IPR005857 This model discriminates cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain from cysteine synthases. Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid - the function of many of these enzymes is unproven.; GO: 0004122 cystathionine beta-synthase activity, 0019343 cysteine biosynthetic process via cystathionine, 0005737 cytoplasm.
Probab=91.58 E-value=0.66 Score=25.84 Aligned_cols=87 Identities=20% Similarity=0.248 Sum_probs=46.4
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHH-HCCCEEEEEE-CHHHHHHHCC----CCCCCEEEEECCCCCCCCHHHHHHHHH
Q ss_conf 887699987885256207999999999-6598399995-7237676244----468751687525656533123321110
Q gi|254781097|r 3 ENNVILLVAGGTGGHVFPAVALSHELK-NRGYAVYLIT-DRRARSFITD----FPADSIYEIVSSQVRFSNPFVFWNSLV 76 (369)
Q Consensus 3 ~~~~ili~~gGTGGHi~palala~~L~-~~g~~v~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~ 76 (369)
T Consensus 178 dk~~~~VAg~GTGGTIt---Gi~ryLK~~~~~~~~ivGaDP~GSila~pE~LN~t~~t~Y~VEGiGyDF~P-~vlDR~v~ 253 (527)
T TIGR01137 178 DKLDMFVAGVGTGGTIT---GIARYLKDESNPKVRIVGADPEGSILAQPEELNKTGRTPYKVEGIGYDFIP-TVLDRKVV 253 (527)
T ss_pred CCCCEEEECCCCCCHHH---HHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCCCCCCCEEEEEECCCCCC-CCCCCCCC
T ss_conf 12117885057883155---455654321389338998769853321764655578983148762147768-52376525
Q ss_pred -HCC-----CCCHHHHHHHHHCC
Q ss_conf -001-----21101355542034
Q gi|254781097|r 77 -ILW-----KAFIASLRLIKKLK 93 (369)
Q Consensus 77 -~~~-----~~~~~~~~ii~~~k 93 (369)
T Consensus 254 D~w~k~~D~~SF~maRrLi~eEG 276 (527)
T TIGR01137 254 DEWIKTDDKESFKMARRLIKEEG 276 (527)
T ss_pred CEEEEECCHHHHHHHHHHHHHCC
T ss_conf 44688088168999999987447