HHsearch alignment for GI: 254781097 and conserved domain: TIGR02149
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family; InterPro: IPR011875 This entry describes Corynebacterium glutamicum GlgA and closely related proteins in other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related IPR011835 from INTERPRO, family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor ..
Probab=98.79 E-value=4.4e-07 Score=69.01 Aligned_cols=324 Identities=18% Similarity=0.205 Sum_probs=169.4
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCEEEEEECHHHHHHHCCCCCCCEEEEEC-CCCCCCCHHHHHHH-----HHHCCCCCHH
Q ss_conf 88525620799999999965-98399995723767624446875168752-56565331233211-----1000121101
Q gi|254781097|r 12 GGTGGHVFPAVALSHELKNR-GYAVYLITDRRARSFITDFPADSIYEIVS-SQVRFSNPFVFWNS-----LVILWKAFIA 84 (369)
Q Consensus 12 gGTGGHi~palala~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----l~~~~~~~~~ 84 (369)
T Consensus 16 GGAGVH---v~~L~~~L~~l~~vdVr~fG~~rteadiPaiPna--~~~~gsL~v~~Y~~~~~L~~GldPran~aL~tfSv 90 (416)
T TIGR02149 16 GGAGVH---VEELARELARLVDVDVRCFGDKRTEADIPAIPNA--FFSEGSLKVLGYRPWSELKEGLDPRANKALKTFSV 90 (416)
T ss_pred CCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCC--CCCCCCEEEEECCCCHHHCCCCCHHHHHHHCCHHH
T ss_conf 887411---8889999986534004643887442334566622--16898328874078743225677225754023115
Q ss_pred HHHHHHHCC-CCEEEECCCCCCHHHHHHHHHCCCCCEE--E--CCCCCC------H-------HHHHHHHHHHHHH-HCC
Q ss_conf 355542034-4424312653210247888623411012--2--153200------1-------5677889999987-413
Q gi|254781097|r 85 SLRLIKKLK-PNVVVGFGGYHSISPLLAGMILRIPSMV--H--EQNVIM------G-------KANRLLSWGVQII-ARG 145 (369)
Q Consensus 85 ~~~ii~~~k-PDvVi~tGGy~s~P~~iaA~~l~iP~vi--h--EqN~v~------G-------~~nk~l~~~a~~v-~~~ 145 (369)
T Consensus 91 DL~m~~d~~~~~vvHsHTWYa~LAG~LAk~Lyd~PlVvTaHSLEP-LRPWK~EQLGgGY~lSsW~EktA~~aAd~vIAVS 169 (416)
T TIGR02149 91 DLAMANDVEDADVVHSHTWYAALAGHLAKLLYDVPLVVTAHSLEP-LRPWKKEQLGGGYKLSSWAEKTAIEAADRVIAVS 169 (416)
T ss_pred HHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCC-CCCCHHHHCCCCCCCCHHHHHHHHHHCCCEEEHH
T ss_conf 788761100271553207888789999999669983997303788-8713175658974202478888998504065311
Q ss_pred C------CCCCCCCCCCCCEEEECCCCHHHHHH-----HHHHHHHHCCCCC-CEEEEEECCCCCCCHHH--HHHHHHHHH
Q ss_conf 4------32222355667325304443245654-----3334433114478-14898630432221023--334454432
Q gi|254781097|r 146 L------VSSQKKVLLRKIIVTGNPIRSSLIKM-----KDIPYQSSDLDQP-FHLLVFGGSQGAKVFSD--IVPKSIALI 211 (369)
Q Consensus 146 ~------~~~~~~~~~~k~~~~G~PvR~~~~~~-----~~~~~~~~~~~~~-~~ILv~GGS~Ga~~ln~--~v~~~~~~l 211 (369)
T Consensus 170 ~amr~DiL~~YP~lD~~kv~Vv~NGId~~~y~~~~~~~~~~v~~~~Gid~~rP~~lFVG------RItRQKGv~~L~~A~ 243 (416)
T TIGR02149 170 GAMREDILKVYPDLDPEKVHVVYNGIDTKEYKPAADDDGNKVLDRYGIDRSRPYVLFVG------RITRQKGVPHLLKAV 243 (416)
T ss_pred HHCHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEE------EEECCCCHHHHHHHH
T ss_conf 10335583158688846468886476457606888874113466326799888789852------020316558999999
Q ss_pred HHHCCCCCEEEEEECCCCH----HHHHHHHHHCCC---C-CCCCCC--CCCCHHHHHCCCEEEECCCC---HHH-HHHHH
Q ss_conf 3202466067762025516----776532210011---1-134544--44514443004489972542---023-33455
Q gi|254781097|r 212 PEMQRKRLVIMQQVREDDK----EKVQKQYDELGC---K-ATLACF--FKDIERYIVEANLLICRSGA---LTV-SEIAV 277 (369)
Q Consensus 212 ~~~~~~~~~v~~~~g~~~~----~~~~~~~~~~~~---~-~~v~~f--~~~m~~~~~~aDlvIsraG~---~Ti-~E~~~ 277 (369)
T Consensus 244 ~~-~~~dvqvVLCAgapDTPEv~~Ev~~~~a~l~~~R~gv~WI~~ml~~~~~~~L~~~A~vFvCPSvYEPLGIvNLEAMA 322 (416)
T TIGR02149 244 HL-ISKDVQVVLCAGAPDTPEVAEEVRQAVAKLDREREGVIWIEKMLPKEELVELLSNAEVFVCPSVYEPLGIVNLEAMA 322 (416)
T ss_pred HH-CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHH
T ss_conf 62-55203598706767872068999999998876169838635658878999998469478648442542055687885
Q ss_pred HCCCEEE-----EECCCCCCCHHHHHHHHHHHCCCEEEEEHHC------------CCHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 2960487-----5335524898999899999889889980001------------9989999999998618999999999
Q gi|254781097|r 278 IGRPAIL-----VPYPHSVDQDQLHNAYYLQEGGGAKVITENF------------LSPERLAEELCSAMKKPSCLVQMAK 340 (369)
Q Consensus 278 ~g~P~Il-----IP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~------------~~~~~l~~~i~~ll~d~~~l~~m~~ 340 (369)
T Consensus 323 C~tpVVAS~~GGIp--EV-----------V~dg~TG~LV~~~~lhdGtGtP~d~d~f~~~LA~ai~~ll~dp~~A~k~G~ 389 (416)
T TIGR02149 323 CGTPVVASAVGGIP--EV-----------VVDGETGFLVPIDDLHDGTGTPDDDDKFEADLAKAIDALLADPELAKKMGE 389 (416)
T ss_pred CCCCEEECCCCCCC--CE-----------EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCH
T ss_conf 07863440368955--26-----------833744312470145577888887405689999999997429578988344
Q ss_pred HHHHCCCC-HHHHHHHHHHHHH
Q ss_conf 99852783-2799999999999
Q gi|254781097|r 341 QVSMKGKP-QAVLMLSDLVEKL 361 (369)
Q Consensus 341 ~~~~~~~~-~aa~~i~~~i~~l 361 (369)
T Consensus 390 aGr~R~~~~FSW~~iA~kT~~~ 411 (416)
T TIGR02149 390 AGRKRAVEEFSWESIAKKTVEL 411 (416)
T ss_pred HHHHHHHHCCCHHHHHHHHHHH
T ss_conf 3465542125757899999999