HHsearch alignment for GI: 254781097 and conserved domain: cd03791

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=98.87  E-value=2e-06  Score=64.41  Aligned_cols=146  Identities=10%  Similarity=0.105  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHCCCCCEEEEEECCCCHH-HHHHHHHHCCCCCCC-CCCCCCCH-HHHHCCCEEEEC----CCCHHHHHH
Q ss_conf             33445443232024660677620255167-765322100111134-54444514-443004489972----542023334
Q gi|254781097|r  203 IVPKSIALIPEMQRKRLVIMQQVREDDKE-KVQKQYDELGCKATL-ACFFKDIE-RYIVEANLLICR----SGALTVSEI  275 (369)
Q Consensus       203 ~v~~~~~~l~~~~~~~~~v~~~~g~~~~~-~~~~~~~~~~~~~~v-~~f~~~m~-~~~~~aDlvIsr----aG~~Ti~E~  275 (369)
T Consensus       313 ll~~a~~~~~~~-~~~~v-i~G~G~~~~e~~~~~l~~~~~~~~~~~~~~~e~l~~~lya~aD~~l~PS~~EP~Gl~qleA  390 (476)
T cd03791         313 LLLEALPELLEL-GGQLV-ILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYA  390 (476)
T ss_pred             HHHHHHHHHHHC-CCEEE-EEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCEEECCCCCCCCCHHHHHH
T ss_conf             999999999963-98899-9946977899999999976899599998068788999998499974255457854899999


Q ss_pred             HHHCCCEEEEECCCCCCCHHH--HHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHH---CCHHHHHHHHHHHHHC--CCC
Q ss_conf             552960487533552489899--989999988988998000199899999999986---1899999999999852--783
Q gi|254781097|r  276 AVIGRPAILVPYPHSVDQDQL--HNAYYLQEGGGAKVITENFLSPERLAEELCSAM---KKPSCLVQMAKQVSMK--GKP  348 (369)
Q Consensus       276 ~~~g~P~IlIP~p~a~~~hQ~--~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll---~d~~~l~~m~~~~~~~--~~~  348 (369)
T Consensus       391 m~~GtppIa~----~tGGL~dtV~d~~~~~~~~tGf~f~~~--~~~~l~~ai~~al~~~~~~~~~~~l~~~am~~~fsW~  464 (476)
T cd03791         391 MRYGTVPIVR----ATGGLADTVIDYNEDTGEGTGFVFEGY--NADALLAALRRALALYRDPEAWRKLQRNAMAQDFSWD  464 (476)
T ss_pred             HHCCCCEEEC----CCCCCCCEEECCCCCCCCCCEEEECCC--CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH
T ss_conf             8669975980----699986510036667777745886799--9999999999999985799999999998864289929


Q ss_pred             HHHHHHHH
Q ss_conf             27999999
Q gi|254781097|r  349 QAVLMLSD  356 (369)
Q Consensus       349 ~aa~~i~~  356 (369)
T Consensus       465 ~~A~~y~~  472 (476)
T cd03791         465 RSAKEYLE  472 (476)
T ss_pred             HHHHHHHH
T ss_conf             99999999