HHsearch alignment for GI: 254781097 and conserved domain: cd03791
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=98.87 E-value=2e-06 Score=64.41 Aligned_cols=146 Identities=10% Similarity=0.105 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCHH-HHHHHHHHCCCCCCC-CCCCCCCH-HHHHCCCEEEEC----CCCHHHHHH
Q ss_conf 33445443232024660677620255167-765322100111134-54444514-443004489972----542023334
Q gi|254781097|r 203 IVPKSIALIPEMQRKRLVIMQQVREDDKE-KVQKQYDELGCKATL-ACFFKDIE-RYIVEANLLICR----SGALTVSEI 275 (369)
Q Consensus 203 ~v~~~~~~l~~~~~~~~~v~~~~g~~~~~-~~~~~~~~~~~~~~v-~~f~~~m~-~~~~~aDlvIsr----aG~~Ti~E~ 275 (369)
T Consensus 313 ll~~a~~~~~~~-~~~~v-i~G~G~~~~e~~~~~l~~~~~~~~~~~~~~~e~l~~~lya~aD~~l~PS~~EP~Gl~qleA 390 (476)
T cd03791 313 LLLEALPELLEL-GGQLV-ILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYA 390 (476)
T ss_pred HHHHHHHHHHHC-CCEEE-EEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCEEECCCCCCCCCHHHHHH
T ss_conf 999999999963-98899-9946977899999999976899599998068788999998499974255457854899999
Q ss_pred HHHCCCEEEEECCCCCCCHHH--HHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHH---CCHHHHHHHHHHHHHC--CCC
Q ss_conf 552960487533552489899--989999988988998000199899999999986---1899999999999852--783
Q gi|254781097|r 276 AVIGRPAILVPYPHSVDQDQL--HNAYYLQEGGGAKVITENFLSPERLAEELCSAM---KKPSCLVQMAKQVSMK--GKP 348 (369)
Q Consensus 276 ~~~g~P~IlIP~p~a~~~hQ~--~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll---~d~~~l~~m~~~~~~~--~~~ 348 (369)
T Consensus 391 m~~GtppIa~----~tGGL~dtV~d~~~~~~~~tGf~f~~~--~~~~l~~ai~~al~~~~~~~~~~~l~~~am~~~fsW~ 464 (476)
T cd03791 391 MRYGTVPIVR----ATGGLADTVIDYNEDTGEGTGFVFEGY--NADALLAALRRALALYRDPEAWRKLQRNAMAQDFSWD 464 (476)
T ss_pred HHCCCCEEEC----CCCCCCCEEECCCCCCCCCCEEEECCC--CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH
T ss_conf 8669975980----699986510036667777745886799--9999999999999985799999999998864289929
Q ss_pred HHHHHHHH
Q ss_conf 27999999
Q gi|254781097|r 349 QAVLMLSD 356 (369)
Q Consensus 349 ~aa~~i~~ 356 (369)
T Consensus 465 ~~A~~y~~ 472 (476)
T cd03791 465 RSAKEYLE 472 (476)
T ss_pred HHHHHHHH
T ss_conf 99999999