HHsearch alignment for GI: 254781097 and conserved domain: cd03816
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.54 E-value=1.9e-05 Score=57.52 Aligned_cols=329 Identities=17% Similarity=0.171 Sum_probs=156.0
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH--HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCC
Q ss_conf 88769998788525620799999999965983999957237--6762444687516875256565331233211100012
Q gi|254781097|r 3 ENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRA--RSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWK 80 (369)
Q Consensus 3 ~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (369)
T Consensus 2 ~~~~v~V~VLGDiGrSPRMqYHA~Sla~~g~~V~lvGy~~s~p~~~i~~~~~I~i~~l~~~p~~~~~l~~~l~~~~Kvl~ 81 (415)
T cd03816 2 KRKRVCVLVLGDIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEILSNPNITIHPLPPPPQRLNKLPFLLFAPLKVLW 81 (415)
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 96579999816778987889999999848987999987899988888519966999778888655545199999999999
Q ss_pred CCHHHHH-HHHHCCCCEEEECCCCCCHHHH----HHHHHCCCCCEE--ECCC-CCCH----HHH----------HHHHHH
Q ss_conf 1101355-5420344424312653210247----888623411012--2153-2001----567----------788999
Q gi|254781097|r 81 AFIASLR-LIKKLKPNVVVGFGGYHSISPL----LAGMILRIPSMV--HEQN-VIMG----KAN----------RLLSWG 138 (369)
Q Consensus 81 ~~~~~~~-ii~~~kPDvVi~tGGy~s~P~~----iaA~~l~iP~vi--hEqN-~v~G----~~n----------k~l~~~ 138 (369)
T Consensus 82 Q~~~L~~~L~~~~~~~~iLvQ-NPPsiPtl~v~~l~~~lr~~klIIDWHN~gyTIL~l~~g~~h~lV~~~k~~E~~fgr~ 160 (415)
T cd03816 82 QFFSLLWLLYKLRPADYILIQ-NPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEKLFGRL 160 (415)
T ss_pred HHHHHHHHHHHCCCCCEEEEE-CCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 999999999835787579841-8876436999999999828829999058775122057888873899999999875503
Q ss_pred HHHHHCCCCCCCCCCC-----CCCCEEE-EC------CCC-----HHHHHHHHHHH-------HHHCCCCCCEEEEEECC
Q ss_conf 9987413432222355-----6673253-04------443-----24565433344-------33114478148986304
Q gi|254781097|r 139 VQIIARGLVSSQKKVL-----LRKIIVT-GN------PIR-----SSLIKMKDIPY-------QSSDLDQPFHLLVFGGS 194 (369)
Q Consensus 139 a~~v~~~~~~~~~~~~-----~~k~~~~-G~------PvR-----~~~~~~~~~~~-------~~~~~~~~~~ILv~GGS 194 (369)
T Consensus 161 a~~~lcVT~AM~~~L~~~~~~~~~~~vlyDrP~~~F~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~llVSSTS 240 (415)
T cd03816 161 ADYNLCVTKAMKEDLQQFNNWKIRATVLYDRPPEQFRPLPLEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTS 240 (415)
T ss_pred CCEEECCCHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
T ss_conf 64605406899999986026688879982288897598867899999974355423233466531135777338995167
Q ss_pred C-CCCCHHHHHHHHHHHHHHHC-----CCCCEEEEEECCCC-HHHHHHHHHHCC-CCCCCC-CC--CCCCHHHHHCCCEE
Q ss_conf 3-22210233344544323202-----46606776202551-677653221001-111345-44--44514443004489
Q gi|254781097|r 195 Q-GAKVFSDIVPKSIALIPEMQ-----RKRLVIMQQVREDD-KEKVQKQYDELG-CKATLA-CF--FKDIERYIVEANLL 263 (369)
Q Consensus 195 ~-Ga~~ln~~v~~~~~~l~~~~-----~~~~~v~~~~g~~~-~~~~~~~~~~~~-~~~~v~-~f--~~~m~~~~~~aDlv 263 (369)
T Consensus 241 WTpDEDF~-iLl~AL~~Yd~~~~~~~~~p~l-l~iITGKGP~K~~y~~~I~~~~l~~V~i~t~wL~~eDYP~lL~~ADLG 318 (415)
T cd03816 241 WTPDEDFG-ILLDALVAYEKSAATGPKLPKL-LCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLG 318 (415)
T ss_pred CCCCCCHH-HHHHHHHHHHHHHHCCCCCCCE-EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCC
T ss_conf 77765567-8999999997653214789987-999968853089999999862888219972578878899987415347
Q ss_pred EEC----CCC---HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC-CEEEEEHHCCCHHHHHHHHHHHHCC---H
Q ss_conf 972----542---0233345529604875335524898999899999889-8899800019989999999998618---9
Q gi|254781097|r 264 ICR----SGA---LTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGG-GAKVITENFLSPERLAEELCSAMKK---P 332 (369)
Q Consensus 264 Isr----aG~---~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G-~a~~i~~~~~~~~~l~~~i~~ll~d---~ 332 (369)
T Consensus 319 VsLHtSSSGlDLPMKVVDMfG~GlPV~A~~f~~i---------~ELVk~~~NG~~F~----~~~eL~~~l~~l~~~~p~~ 385 (415)
T cd03816 319 VSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCI---------DELVKHGENGLVFG----DSEELAEQLIDLLSNFPNR 385 (415)
T ss_pred EEECCCCCCCCCCHHHHHHCCCCCCEEEECCCCH---------HHHHCCCCCCCEEC----CHHHHHHHHHHHHHCCCCH
T ss_conf 2421268766777021010268875798337517---------87722687876657----8999999999998559966
Q ss_pred HHHHHHHHHHHHCCC
Q ss_conf 999999999985278
Q gi|254781097|r 333 SCLVQMAKQVSMKGK 347 (369)
Q Consensus 333 ~~l~~m~~~~~~~~~ 347 (369)
T Consensus 386 ~~l~~lk~~a~~~~~ 400 (415)
T cd03816 386 GKLNSLKKGAQEESE 400 (415)
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 899999977777414