HHsearch alignment for GI: 254781097 and conserved domain: pfam00534
>pfam00534 Glycos_transf_1 Glycosyl transferases group 1. Mutations in this domain of subunit A of phosphatidylinositol N-acetylglucosaminyltransferase lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family.
Probab=99.17 E-value=1.1e-09 Score=87.29 Aligned_cols=160 Identities=16% Similarity=0.183 Sum_probs=107.7
Q ss_pred HHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH--CCCCCCCCCCCC-
Q ss_conf 34433114478148986304322210233344544323202466067762025516776532210--011113454444-
Q gi|254781097|r 175 IPYQSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKVQKQYDE--LGCKATLACFFK- 251 (369)
Q Consensus 175 ~~~~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~--~~~~~~v~~f~~- 251 (369)
T Consensus 4 ~~r~~~~i~~~~~vi~~~G~~~~~Kg~~~~i~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 83 (172)
T pfam00534 4 EERKKLGIPEDKPIILFVGRLVPEKGLDLLLEAFALLKEQLHPNLKLVIVGDGEEEKKLKKLALKLGLEDNVIFVGFVPR 83 (172)
T ss_pred HHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCH
T ss_conf 99998799999959999654855449899999899888740898599998378326789999998399986899578898
Q ss_pred -CCHHHHHCCCEEEEC----CCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHH
Q ss_conf -514443004489972----542023334552960487533552489899989999988988998000199899999999
Q gi|254781097|r 252 -DIERYIVEANLLICR----SGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELC 326 (369)
Q Consensus 252 -~m~~~~~~aDlvIsr----aG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~ 326 (369)
T Consensus 84 ~~~~~~l~~sdi~i~ps~~E~~~~~~~Eam~~G~pvI~s~~~~--------~~eii~~~~~G~~~~~~--~~~~l~~~i~ 153 (172)
T pfam00534 84 EDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIASDVGG--------PAEIVKDGETGLLVDPG--DAEALAEAIE 153 (172)
T ss_pred HHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHCCCEEEEECCCC--------HHHHHHCCCEEEEECCC--CHHHHHHHHH
T ss_conf 9999999972410477366515711899996797199956997--------29997189839997899--9999999999
Q ss_pred HHHCCHHHHHHHHHHHHH
Q ss_conf 986189999999999985
Q gi|254781097|r 327 SAMKKPSCLVQMAKQVSM 344 (369)
Q Consensus 327 ~ll~d~~~l~~m~~~~~~ 344 (369)
T Consensus 154 ~li~n~~~~~~m~~n~~~ 171 (172)
T pfam00534 154 KLLKDEELRERLGENARK 171 (172)
T ss_pred HHHCCHHHHHHHHHHHCC
T ss_conf 998799999999998448