HHsearch alignment for GI: 254781097 and conserved domain: pfam04413
>pfam04413 Glycos_transf_N 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family.
Probab=93.70 E-value=0.6 Score=26.15 Aligned_cols=103 Identities=21% Similarity=0.209 Sum_probs=57.5
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCC--EEEEEE-CHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 76999878852562079999999996598--399995-723767624446875168752565653312332111000121
Q gi|254781097|r 5 NVILLVAGGTGGHVFPAVALSHELKNRGY--AVYLIT-DRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKA 81 (369)
Q Consensus 5 ~~ili~~gGTGGHi~palala~~L~~~g~--~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (369)
T Consensus 22 ~~IWiHaa-SvGE~~~~~~li~~l~~~~p~~~iliT~~T~sg~~~~~~~~~~~~~~~y-lP----------------~D~ 83 (186)
T pfam04413 22 PLIWLHAA-SVGEVLAALPLIEALKARYPGLRILVTTTTPTGAELARKLLPDRVIHQY-LP----------------LDL 83 (186)
T ss_pred CEEEEEEC-CHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCEEEE-CC----------------CCC
T ss_conf 88999839-8899999999999999868996299983581699999986789807997-77----------------677
Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCHHHH-HHHHHCCCCCEEECCCCCC
Q ss_conf 1013555420344424312653210247-8886234110122153200
Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGYHSISPL-LAGMILRIPSMVHEQNVIM 128 (369)
Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy~s~P~~-iaA~~l~iP~vihEqN~v~ 128 (369)
T Consensus 84 ~~~~~~fl~~~~P~~~i~~e~Ei-WPnli~~~~~~~ip~~li--nar~ 128 (186)
T pfam04413 84 PGAVRRFLKHWRPDLLVIVETEL-WPNLIAAAKKRGIPVVLV--NARL 128 (186)
T ss_pred HHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHCCCCEEEE--ECCC
T ss_conf 79999999985998899986132-099999999879999999--7776