HHsearch alignment for GI: 254781099 and conserved domain: COG0769
>COG0769 MurE UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=1e-41 Score=307.07 Aligned_cols=321 Identities=19% Similarity=0.212 Sum_probs=217.5
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC---------------------CCCCCCCCCCEEEEECC
Q ss_conf 688689960345752157899999987310000000124432---------------------21101688837999217
Q gi|254781099|r 111 LQSPFIAVTGTNGKSSTVALISHVLRKNGYDVQLGGNIGLPI---------------------LNLEYFSPNRFYVIECS 169 (468)
Q Consensus 111 ~~~~vI~VTGT~GKTTt~~ll~~iL~~~g~~~~~~GNiG~p~---------------------~~~~~~~~~~~~V~E~S 169 (468)
T Consensus 89 ~~l~vigvTGTNgKTt~t~~~~~~~~~~g~~~~~~gT~g~~~~~~~~~~~~~tTP~~~~l~~~~~~~~d~~~e~~vmEvs 168 (475)
T COG0769 89 GKLKVIGVTGTNGKTTTTSLLAQILKKLGKKTALIGTEGDELSPGILEPTGLTTPEALDLQNLLRDLLDRGAEIAVMEVS 168 (475)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 78518986387857999999999988629825899977663268863456678921789999999999738809998850
Q ss_pred CCCC--CCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEE---ECCCCCCCCCCHHHHHHHHHCCCCCCEEECCC
Q ss_conf 7543--212233322101110021012221110000112210001---01344322478678999874012343011036
Q gi|254781099|r 170 SYQI--ELTPTIDPSIGVLLNISPDHLDRHHTLENYVNIKKKIVT---MSKHAIICINDHQCEKIAYDMNFIGHSISRIS 244 (468)
Q Consensus 170 SfQL--~~~~~~~PdiavITNI~~DHLd~~~s~e~y~~aK~~i~~---~~~~~iln~dd~~~~~~~~~~~~~~~~~~~~~ 244 (468)
T Consensus 169 sh~l~~~Rv~~~~f~v~~ftnls~DHlD~h~t~e~Y~~aK~~lf~~~~~~~~~Vin~dd~~~~~~~~~~~~~~~~~~~~~ 248 (475)
T COG0769 169 SHGLVQGRVEGVTFDVGVFTNLSRDHLDYHGTMEYYGAAKAVLFESLPHSGEAVINPDDGHGLDYKERLKNALGDYITYG 248 (475)
T ss_pred HHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEC
T ss_conf 34797578656359886456656666523574999998898776405788747987788038889999985688789968
Q ss_pred CCCCCCC-----CCEEECCCEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHH
Q ss_conf 4432223-----41121241354146764212345588510111001101222102222211000000001345443321
Q gi|254781099|r 245 SQSLQSD-----SDLYIDESFLKCSATSEVIFDFSQETKKHNIQNLVTSAVVCMQLGLKVEEIKRALLSCGGLTHRLQTI 319 (468)
Q Consensus 245 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~G~HNi~NalaAia~a~~lGi~~~~i~~~L~~f~gv~~R~E~i 319 (468)
T Consensus 249 ~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~~L~G~fNv~NaLaA~a~~~~lG~~~e~i~~~l~~~~~v~GRmE~v 328 (475)
T COG0769 249 CDFKRPDLDYRGIEESSSGSDFVFEPSGGIGEYELPLPGLFNVYNALAAVAAALALGVDLEDILAGLETLKPVPGRMELV 328 (475)
T ss_pred CCCCCCCHHHCCCEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEE
T ss_conf 89963121222611421354058863787326860412277899999999999874999999999997468999860687
Q ss_pred CCCCCCEEECCCCCCCHHHHHHHHHCCC----CCCEEEEC-CCCCCCCHHHH-HHHHCCCCEEEEE------CCCHHHHH
Q ss_conf 0034300000235567555555320133----32001203-21012206898-9984278689998------89989988
Q gi|254781099|r 320 ARLGHVIFINDSKATNLHSVIHAFLNEK----RRIYWIAG-GLSKSDDFSTL-FPFISKIAKAYFI------GNSAMLFF 387 (468)
Q Consensus 320 ~~~~gv~iIDDS~atnp~a~~~Al~~~~----~~i~lI~G-G~~K~~d~~~L-~~~~~~~~~~~li------G~~~~~i~ 387 (468)
T Consensus 329 ~~-~~~~v~VD-yAHnPd~le~~L~~~~~~~~g~li~VfG~gGDrD~~kr~~mg~ia~~~ad~vivt~dnpR~edp~~i~ 406 (475)
T COG0769 329 NI-GGKLVIVD-YAHNPDGLEKALRAVRLHAAGRLIVVFGCGGDRDKSKRPDMGAIAEQLADIVIVTSDNPRSEDPAVIL 406 (475)
T ss_pred CC-CCCEEEEE-ECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHH
T ss_conf 38-99769999-53486999999999875349848999776688753430315999985599369918998876889999
Q ss_pred HHHHCCCCEEE-ECCHHHHHHHHHHHHHHCCCCCEEE-ECCCCCCCCC
Q ss_conf 86316898899-8799999999999998448985999-4522166313
Q gi|254781099|r 388 HHFGGKINSTL-SKTLDQALKSVVRDVENVQLPSIVL-FSPGCASFDQ 433 (468)
Q Consensus 388 ~~~~~~~~~~~-~~~~~~a~~~i~~~~~~~~~gDiVL-lSPa~aS~d~ 433 (468)
T Consensus 407 ~~i~~g~~~~~~~~~~~dr~~AI~~ai~~a~~~D~vliagkGhe~yq~ 454 (475)
T COG0769 407 ADILAGIEAPEKYEIIEDREEAIRKALDLAKEGDVVLIAGKGHETYQI 454 (475)
T ss_pred HHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHH
T ss_conf 999836476641430110999999999863248878996423513563