HHsearch alignment for GI: 254781099 and conserved domain: COG2403
>COG2403 Predicted GTPase [General function prediction only].
Probab=95.03 E-value=0.12 Score=30.49 Aligned_cols=131 Identities=20% Similarity=0.283 Sum_probs=71.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEE---------C-CCHH-HHHHHHCCCEEECCCCCC-------CCCCC
Q ss_conf 89879998368548999999998--598699981---------8-9647-889997898996453157-------22588
Q gi|254781099|r 7 RNHSIAVFGLGRSGLSAACALKD--SGVHVIAWD---------D-HPCA-VKQAKDMGIEVIDFREIP-------WSIIS 66 (468)
Q Consensus 7 ~~k~v~i~G~G~sG~s~A~~l~~--~G~~V~~~D---------~-~~~~-~~~l~~~g~~~~~~~~~~-------~~~~d 66 (468)
T Consensus 5 a~kRviiLgaggrdfhv~n~a~r~~~~yevvaf~aaqiiG~~er~yppsleg~~~p~Gvpi~~~k~~~~lek~ire~~VD 84 (449)
T COG2403 5 ARKRVIILGAGGRDFHVFNVALRDNPEYEVVAFTAAQIIGGTERIYPPSLEGVLYPLGVPILPEKDYDDLEKIIREKDVD 84 (449)
T ss_pred CCEEEEEEECCCCCCCHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 75269999506756622467860687524788899883277665389970113233783304664689999999870766
Q ss_pred EEEE--CCCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCEEEEECC---CCCCHHHHHHHHHHHHHHHH
Q ss_conf 8998--888685675578889999976980998303422334301568868996034---57521578999999873100
Q gi|254781099|r 67 FLVL--SPGIALTGENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAVTGT---NGKSSTVALISHVLRKNGYD 141 (468)
Q Consensus 67 ~vv~--Spgi~~~~~~~~~~~~~a~~~gi~v~s~~el~~~~~~~~~~~~~vI~VTGT---~GKTTt~~ll~~iL~~~g~~ 141 (468)
T Consensus 85 ~~VlaySD-vs~e~v--~~IaS~vLs~GA~f~---~~g-P~et~~~~ekPviaV~atrtg~GKsaVS~~v~r~l~ergyr 157 (449)
T COG2403 85 IVVLAYSD-VSYEHV--FRIASRVLSAGADFK---ELG-PKETMLKLEKPVIAVTATRTGVGKSAVSRYVARLLRERGYR 157 (449)
T ss_pred EEEEECCC-CCHHHH--HHHHHHHHHCCCEEE---EEC-CCHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 16877012-898998--789999974785368---727-52776651485599997236655678889999999866982
Q ss_pred CCC
Q ss_conf 000
Q gi|254781099|r 142 VQL 144 (468)
Q Consensus 142 ~~~ 144 (468)
T Consensus 158 v~v 160 (449)
T COG2403 158 VCV 160 (449)
T ss_pred EEE
T ss_conf 379