HHsearch alignment for GI: 254781099 and conserved domain: PRK02705
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=100.00 E-value=0 Score=809.83 Aligned_cols=430 Identities=32% Similarity=0.424 Sum_probs=364.7
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCH-----HHHHHHHCCCEEECCCC-------CCCCCCCEEEECCCCCCCC
Q ss_conf 99983685489999999985986999818964-----78899978989964531-------5722588899888868567
Q gi|254781099|r 11 IAVFGLGRSGLSAACALKDSGVHVIAWDDHPC-----AVKQAKDMGIEVIDFRE-------IPWSIISFLVLSPGIALTG 78 (468)
Q Consensus 11 v~i~G~G~sG~s~A~~l~~~G~~V~~~D~~~~-----~~~~l~~~g~~~~~~~~-------~~~~~~d~vv~Spgi~~~~ 78 (468)
T Consensus 3 a~V~GlG~sG~s~a~~L~~~G~~v~~~D~~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~~~~~d~vV~SPGI~~~- 81 (459)
T PRK02705 3 AHVIGLGRSGIAAARLLKAQGWEVVVSERNDSPELLERQQELEQEGITVELGKPLELESFQPWLDQPDLVVVSPGIPWD- 81 (459)
T ss_pred EEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCCEEEECCCCCCC-
T ss_conf 9999548999999999997899599998989923478999998759869816766643013311678889989964998-
Q ss_pred CCCCHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC--
Q ss_conf 557888999997698099830342233430156886899603457521578999999873100000001244322110--
Q gi|254781099|r 79 ENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAVTGTNGKSSTVALISHVLRKNGYDVQLGGNIGLPILNLE-- 156 (468)
Q Consensus 79 ~~~~~~~~~a~~~gi~v~s~~el~~~~~~~~~~~~~vI~VTGT~GKTTt~~ll~~iL~~~g~~~~~~GNiG~p~~~~~-- 156 (468)
T Consensus 82 ---~p~~~~a~~~gi~i~~eiel~~~~~----~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~~~~~~GNIG~p~~~~~l~ 154 (459)
T PRK02705 82 ---HPTLVELREKGIEVIGEMELAWRAL----KHIPWVGITGTNGKTTVTHLLAHILQAAGLNAPMCGNIGYAACELALL 154 (459)
T ss_pred ---CHHHHHHHHCCCCEECHHHHHHHHH----CCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHH
T ss_conf ---9999999987997214999999985----049757771789727899999999998399853640137620444421
Q ss_pred ---CCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHC
Q ss_conf ---16888379992177543212233322101110021012221110000112210001013443224786789998740
Q gi|254781099|r 157 ---YFSPNRFYVIECSSYQIELTPTIDPSIGVLLNISPDHLDRHHTLENYVNIKKKIVTMSKHAIICINDHQCEKIAYDM 233 (468)
Q Consensus 157 ---~~~~~~~~V~E~SSfQL~~~~~~~PdiavITNI~~DHLd~~~s~e~y~~aK~~i~~~~~~~iln~dd~~~~~~~~~~ 233 (468)
T Consensus 155 ~~~~~~~~d~~VlE~SSfQLe~~~~~~p~iavitNI~~DHLD~h~s~e~Y~~aK~~i~~~~~~~V~N~DD~~l~~~~~~~ 234 (459)
T PRK02705 155 RSGKAEKPDWIVAELSSYQIESSPELAPKIGIWTTFTPDHLERHGTLENYFAIKASLLERSEIRILNGDDPYLRQGRSSW 234 (459)
T ss_pred CCCCCCCCCEEEEECCHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHC
T ss_conf 34678876579997571331336677877899966887787664217789999997506598899938879999987643
Q ss_pred CCCCCEEECCCC-CCCCCCCCEEECCCEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCHHHCCCHHHH
Q ss_conf 123430110364-4322234112124135414676421234558851011100110122210222221100000000134
Q gi|254781099|r 234 NFIGHSISRISS-QSLQSDSDLYIDESFLKCSATSEVIFDFSQETKKHNIQNLVTSAVVCMQLGLKVEEIKRALLSCGGL 312 (468)
Q Consensus 234 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~HNi~NalaAia~a~~lGi~~~~i~~~L~~f~gv 312 (468)
T Consensus 235 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l~G~HN~~NalAAia~a~~lGi~~e~I~~aL~~F~Gl 313 (459)
T PRK02705 235 PKG-YWVSTQGKKSLLDQADFWIDQEGWVVERGEPLFPLEALKMPGAHNLQNLLLAVAAARLAGLSAEAIAKALRSFPGV 313 (459)
T ss_pred CCC-EEEECCCCCCCCCCCCEEECCCCEEEECCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
T ss_conf 774-7996556411211144488269879977805654042168767689999999999998588636678887508999
Q ss_pred HHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHC-CCCEEEEECCCHHHHHHHHH
Q ss_conf 54433210034300000235567555555320133320012032101220689899842-78689998899899888631
Q gi|254781099|r 313 THRLQTIARLGHVIFINDSKATNLHSVIHAFLNEKRRIYWIAGGLSKSDDFSTLFPFIS-KIAKAYFIGNSAMLFFHHFG 391 (468)
Q Consensus 313 ~~R~E~i~~~~gv~iIDDS~atnp~a~~~Al~~~~~~i~lI~GG~~K~~d~~~L~~~~~-~~~~~~liG~~~~~i~~~~~ 391 (468)
T Consensus 314 pHRlE~V~~~~gV~fiNDSKaTN~~a~~~Al~~~~~~iilI~GG~~K~~d~~~l~~~~~~~v~~v~~~G~~~~~i~~~l~ 393 (459)
T PRK02705 314 PHRLERIGTINGIDFINDSKATNYDAAEVGLKAVPGPIILIAGGEAKQGDDSAWLKQIKAKAAAVLLFGEAAPELAQLLQ 393 (459)
T ss_pred CCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHH
T ss_conf 98538987428878972787889899999998289986999567666787399999986406199998989999999997
Q ss_pred CC---CCEEEECCHHHHHHHHHHHHHHCCCCC--EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 68---988998799999999999998448985--99945221663134798999999999998637
Q gi|254781099|r 392 GK---INSTLSKTLDQALKSVVRDVENVQLPS--IVLFSPGCASFDQYNNFRERGFSFMSQVSEIP 452 (468)
Q Consensus 392 ~~---~~~~~~~~~~~a~~~i~~~~~~~~~gD--iVLlSPa~aS~d~f~~y~~RG~~F~~~v~~l~ 452 (468)
T Consensus 394 ~~~~~~~~~~~~~l~~Av~~a~~~a~---~~~~~~VLlSPacaSfD~f~nyeeRG~~F~~~V~~l~ 456 (459)
T PRK02705 394 ESGYTGEIEIVETLDEAVNRAFELAK---ELQAKSVLLSPACASFDQYQNFEERGDHFRQLIQELL 456 (459)
T ss_pred HCCCCCCEEECCCHHHHHHHHHHHHH---CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 36998776985999999999999876---5899989968744010132799999999999999986