HHsearch alignment for GI: 254781099 and conserved domain: PRK08040

Probab=93.19  E-value=0.25  Score=28.32  Aligned_cols=87  Identities=18%  Similarity=0.222  Sum_probs=55.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHHH--CCCEEECCCCCCCCCCCEEEECCCCCCCCCC
Q ss_conf             8987999836-8548999999998598---69998189647889997--8989964531572258889988886856755
Q gi|254781099|r    7 RNHSIAVFGL-GRSGLSAACALKDSGV---HVIAWDDHPCAVKQAKD--MGIEVIDFREIPWSIISFLVLSPGIALTGEN   80 (468)
Q Consensus         7 ~~k~v~i~G~-G~sG~s~A~~l~~~G~---~V~~~D~~~~~~~~l~~--~g~~~~~~~~~~~~~~d~vv~Spgi~~~~~~   80 (468)
T Consensus         3 ~~~~VaivGATG~VGq~~l~lL~e~~fp~~~l~~laS~~SaGk~i~~~~~~~~v~~~~~~~~~~~di~ff~a~~~~----   78 (337)
T PRK08040          3 EGWNIALLGATGAVGEALLETLAERQFPVGEIYALAREESAGETLRFGGKSITVQDAAEFDWTQAQLAFFVAGKEA----   78 (337)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCEEEECCCCHH----
T ss_conf             9987999888508899999999717998135999988888997777899188999777033246988999177178----


Q ss_pred             CCHHHHHHHHCCCEEEE
Q ss_conf             78889999976980998
Q gi|254781099|r   81 AHWCVKLANQFNVEIIG   97 (468)
Q Consensus        81 ~~~~~~~a~~~gi~v~s   97 (468)
T Consensus        79 s~~~~~~a~~aG~~VID   95 (337)
T PRK08040         79 SAAYAEEATNAGCLVID   95 (337)
T ss_pred             HHHHHHHHHHCCCEEEE
T ss_conf             88889999848959997