HHsearch alignment for GI: 254781099 and conserved domain: PRK11579

Probab=93.65  E-value=0.42  Score=26.70  Aligned_cols=88  Identities=15%  Similarity=0.131  Sum_probs=51.9

Q ss_pred             CCCEEEEECCCHHHHH-HHHHHHH-CCCEEEE-EECCCHHHHHHHHCCCEEECCCCCC--CCCCCEEEECCCCCCCCCCC
Q ss_conf             8987999836854899-9999998-5986999-8189647889997898996453157--22588899888868567557
Q gi|254781099|r    7 RNHSIAVFGLGRSGLS-AACALKD-SGVHVIA-WDDHPCAVKQAKDMGIEVIDFREIP--WSIISFLVLSPGIALTGENA   81 (468)
Q Consensus         7 ~~k~v~i~G~G~sG~s-~A~~l~~-~G~~V~~-~D~~~~~~~~l~~~g~~~~~~~~~~--~~~~d~vv~Spgi~~~~~~~   81 (468)
T Consensus         3 ~~irvgiiG~G~~~~~~h~~~~~~~~~~~l~av~d~~~~~~-~a~~~~~~~~~~~~~ll~~~~id~V~i~t--p~--~~H   77 (346)
T PRK11579          3 DKIRVGLIGYGYASKTFHAPLIAGTPGLELAAVSSSDETKV-KADWPTVTVVSEPKHLFNDPNIDLIVIPT--PN--DTH   77 (346)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHH-HCCCCCCCEECCHHHHHCCCCCCEEEECC--CC--HHH
T ss_conf             88759999362999999999996299919999979899999-50258995389999994599999999979--96--789


Q ss_pred             CHHHHHHHHCCCEEEEEH
Q ss_conf             888999997698099830
Q gi|254781099|r   82 HWCVKLANQFNVEIIGDI   99 (468)
Q Consensus        82 ~~~~~~a~~~gi~v~s~~   99 (468)
T Consensus        78 ~~~~~~al~aGkhv~~EK   95 (346)
T PRK11579         78 FPLAKAALEAGKHVVVDK   95 (346)
T ss_pred             HHHHHHHHHCCCCEEECC
T ss_conf             999999998799489538