HHsearch alignment for GI: 254781099 and conserved domain: TIGR01081
>TIGR01081 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; InterPro: IPR005757 The tripeptide L-ananyl-gamma-D-glutamyl-meso-diaminopimelic acid is efficiently re-cycled during the formation of bacterial cell wall murein. UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase is an essential enzyme in this process which links the tripeptide to UDP-N-acetylmuramate.; GO: 0016874 ligase activity, 0007047 cell wall organization and biogenesis.
Probab=100.00 E-value=0 Score=348.82 Aligned_cols=404 Identities=19% Similarity=0.190 Sum_probs=286.1
Q ss_pred EEEEECCCHHHH-HHHHHHHHCCCEEEEEECC--CHHHHHHHHCCCEEECCCC-CCC-C-CCCEEEECCCCCCCCCCCCH
Q ss_conf 799983685489-9999999859869998189--6478899978989964531-572-2-58889988886856755788
Q gi|254781099|r 10 SIAVFGLGRSGL-SAACALKDSGVHVIAWDDH--PCAVKQAKDMGIEVIDFRE-IPW-S-IISFLVLSPGIALTGENAHW 83 (468)
Q Consensus 10 ~v~i~G~G~sG~-s~A~~l~~~G~~V~~~D~~--~~~~~~l~~~g~~~~~~~~-~~~-~-~~d~vv~Spgi~~~~~~~~~ 83 (468)
T Consensus 1 ~IHIlGIcGTFMGG~A~~A~~~G~~VtGsDa~vYPPMST~LE~~GIe~~~gfD~~QL~~~~pD~~vi----GNa~~RG~p 76 (459)
T TIGR01081 1 HIHILGICGTFMGGLAMLAKQLGHEVTGSDANVYPPMSTLLEAQGIEIIEGFDAAQLEPFKPDLVVI----GNAMKRGNP 76 (459)
T ss_pred CEEEEEECHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHCCCEEECCCCHHHCCCCCCCEEEE----CCCCCCCCH
T ss_conf 9589972513278999999874955701356558865688875573032277844400348887998----463316744
Q ss_pred HHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHC-CCC----CCCCCCCCC----
Q ss_conf 89999976980998303422334301568868996034575215789999998731000-000----012443221----
Q gi|254781099|r 84 CVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAVTGTNGKSSTVALISHVLRKNGYDV-QLG----GNIGLPILN---- 154 (468)
Q Consensus 84 ~~~~a~~~gi~v~s~~el~~~~~~~~~~~~~vI~VTGT~GKTTt~~ll~~iL~~~g~~~-~~~----GNiG~p~~~---- 154 (468)
T Consensus 77 ~VE~vL~~nl~Y~SGPQ---WL~d~~L~drWVlaV~GTHGKTTT~~M~~WvLE~~G~~pGFliGGv~gNFgvSArLg~~p 153 (459)
T TIGR01081 77 CVEAVLEKNLPYTSGPQ---WLHDFVLRDRWVLAVAGTHGKTTTASMLAWVLEQCGLKPGFLIGGVPGNFGVSARLGETP 153 (459)
T ss_pred HHHHHHHCCCCCCCCCC---HHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEECCCCC
T ss_conf 67898726895021751---056334213427895078860468899999998637988726734245342142068775
Q ss_pred -CCCCCCCCEEEEECCCC----CCCCCC--CCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEE---ECCCCCCCCCCH
Q ss_conf -10168883799921775----432122--33322101110021012221110000112210001---013443224786
Q gi|254781099|r 155 -LEYFSPNRFYVIECSSY----QIELTP--TIDPSIGVLLNISPDHLDRHHTLENYVNIKKKIVT---MSKHAIICINDH 224 (468)
Q Consensus 155 -~~~~~~~~~~V~E~SSf----QL~~~~--~~~PdiavITNI~~DHLd~~~s~e~y~~aK~~i~~---~~~~~iln~dd~ 224 (468)
T Consensus 154 r~dp~~~S~fFviEADEYD~AFFDKRSKFVHY~PRTlvlNNleFDHADIFddL~AI~~QFHhlvR~vP~~G~i~~~~~~~ 233 (459)
T TIGR01081 154 RQDPNSQSPFFVIEADEYDTAFFDKRSKFVHYRPRTLVLNNLEFDHADIFDDLKAIQRQFHHLVRTVPGEGLILAPERDQ 233 (459)
T ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCHHH
T ss_conf 66745468757995356565100254331202760014515554445578768998740306889646886484350146
Q ss_pred HHHH-HHHHCCCCCCEEECCCCCCCCCCCCEEECCCEEE-ECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCC
Q ss_conf 7899-9874012343011036443222341121241354-1467642123455885101110011012221022222110
Q gi|254781099|r 225 QCEK-IAYDMNFIGHSISRISSQSLQSDSDLYIDESFLK-CSATSEVIFDFSQETKKHNIQNLVTSAVVCMQLGLKVEEI 302 (468)
Q Consensus 225 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~G~HNi~NalaAia~a~~lGi~~~~i 302 (468)
T Consensus 234 ~l~~~l~~GCWs~~e~~G~~~~W--~-A~~~~~D~S~f~Vll~G~~vg~VkW~lvG~HN~~NaL~aIAAArHvGV~~~~A 310 (459)
T TIGR01081 234 SLKDTLAKGCWSEQEFLGEQGEW--Q-AEKITADASEFEVLLDGEKVGEVKWSLVGEHNMHNALMAIAAARHVGVAIEDA 310 (459)
T ss_pred HHHHHHHHCCCCCHHCCCCCCCH--H-HHHHCCCCHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHH
T ss_conf 89999860687201124677750--5-76540451000220178436776533304600135899998742167687899
Q ss_pred HHHCCCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCC------CCCEEEECCC---CC-CCCHHHHHHHHCC
Q ss_conf 000000013454433210034300000235567555555320133------3200120321---01-2206898998427
Q gi|254781099|r 303 KRALLSCGGLTHRLQTIARLGHVIFINDSKATNLHSVIHAFLNEK------RRIYWIAGGL---SK-SDDFSTLFPFISK 372 (468)
Q Consensus 303 ~~~L~~f~gv~~R~E~i~~~~gv~iIDDS~atnp~a~~~Al~~~~------~~i~lI~GG~---~K-~~d~~~L~~~~~~ 372 (468)
T Consensus 311 c~ALG~F~N~kRRlE~kG~~Ng~TVYDD-FAHHP~AI~~Tl~~LR~kVGG~~rIlAVLEPRSnTMKlG~~K~~la~sL~~ 389 (459)
T TIGR01081 311 CEALGSFVNAKRRLELKGEANGVTVYDD-FAHHPTAIEATLAALRDKVGGGARILAVLEPRSNTMKLGVHKDDLAPSLGR 389 (459)
T ss_pred HHHHCCCCCCCEEEEEEEEEEEEEEECC-CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf 9870320012001567211313787327-667868999999998752399706999877874410034325566676660
Q ss_pred CCEEEEEC-CCHHHHHHHHHC--CCCEEEECCHHHHHHHHHHHHHHCCCCCEEE-ECCC
Q ss_conf 86899988-998998886316--8988998799999999999998448985999-4522
Q gi|254781099|r 373 IAKAYFIG-NSAMLFFHHFGG--KINSTLSKTLDQALKSVVRDVENVQLPSIVL-FSPG 427 (468)
Q Consensus 373 ~~~~~liG-~~~~~i~~~~~~--~~~~~~~~~~~~a~~~i~~~~~~~~~gDiVL-lSPa 427 (468)
T Consensus 390 AD~Vf~~~p~~~~W~V~e~~~~~~~p~~~~~~~D~~v~~iv---k~A~~gD~ILVMSNG 445 (459)
T TIGR01081 390 ADEVFLLQPEQIPWEVAEVAEQCVQPANVSADLDELVAMIV---KEAQPGDHILVMSNG 445 (459)
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHCCCCCEEEEEECC
T ss_conf 03565316898870599999860240211010789999999---605888758997468