HHsearch alignment for GI: 254781099 and conserved domain: TIGR01316
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. .
Probab=97.29 E-value=0.001 Score=44.75 Aligned_cols=92 Identities=26% Similarity=0.415 Sum_probs=60.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCEE-ECCCCCCCCCCCEEEECCCCCCCCCCCCHHHH
Q ss_conf 98799983685489999999985986999818964788999789899-64531572258889988886856755788899
Q gi|254781099|r 8 NHSIAVFGLGRSGLSAACALKDSGVHVIAWDDHPCAVKQAKDMGIEV-IDFREIPWSIISFLVLSPGIALTGENAHWCVK 86 (468)
Q Consensus 8 ~k~v~i~G~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~l~~~g~~~-~~~~~~~~~~~d~vv~Spgi~~~~~~~~~~~~ 86 (468)
T Consensus 142 ~~kVAViGaGPAGL~cA~elAk~Gh~VtvfEA-------LhKPGGV~~YGIPefRLpKe--i~------------~~E~k 200 (462)
T TIGR01316 142 KKKVAVIGAGPAGLACASELAKKGHEVTVFEA-------LHKPGGVLAYGIPEFRLPKE--IV------------ETEVK 200 (462)
T ss_pred CCEEEEECCCCHHHHHHHHHHHCCCEEEEEEE-------CCCCCCEEEECCCCCCCCHH--HH------------HHHHH
T ss_conf 87799984682146889999747986999971-------48998567536888548757--88------------98888
Q ss_pred HHHHCCCEEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHC-CC
Q ss_conf 99976980998303422334301568868996034575215789999998731000-00
Q gi|254781099|r 87 LANQFNVEIIGDIELFVRERRFSSLQSPFIAVTGTNGKSSTVALISHVLRKNGYDV-QL 144 (468)
Q Consensus 87 ~a~~~gi~v~s~~el~~~~~~~~~~~~~vI~VTGT~GKTTt~~ll~~iL~~~g~~~-~~ 144 (468)
T Consensus 201 ~LkklGv~fr~~~---------------lv------Gkt~T---L~eL~~~YGfDAVFI 235 (462)
T TIGR01316 201 KLKKLGVKFRTDY---------------LV------GKTVT---LEELLEKYGFDAVFI 235 (462)
T ss_pred HHHHCCEEEEECC---------------EE------CCCHH---HHHHHHHCCCCEEEE
T ss_conf 7632663799443---------------75------05112---888887519707999