HHsearch alignment for GI: 254781099 and conserved domain: TIGR01372
>TIGR01372 soxA sarcosine oxidase, alpha subunit family; InterPro: IPR006277 This set of sequences describe the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members share the same function. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate . Bacterial sarcosine oxidases have been isolated from over a dozen different organisms and fall into two major classes (1) monomeric form that contains only covalent flavin and (2) heterotetrameric (alpha, beta, gamma, delta) form that contain a covalent and noncovalent flavin, this entry represents the heterotetrameric form. ; GO: 0008115 sarcosine oxidase activity, 0046653 tetrahydrofolate metabolic process.
Probab=94.35 E-value=0.077 Score=31.81 Aligned_cols=31 Identities=39% Similarity=0.581 Sum_probs=29.2
Q ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 9998368548999999998598699981896
Q gi|254781099|r 11 IAVFGLGRSGLSAACALKDSGVHVIAWDDHP 41 (468)
Q Consensus 11 v~i~G~G~sG~s~A~~l~~~G~~V~~~D~~~ 41 (468)
T Consensus 179 VLVVGaGPAGLAAA~aAa~~GArViL~DE~~ 209 (1026)
T TIGR01372 179 VLVVGAGPAGLAAALAAARAGARVILVDEQA 209 (1026)
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 7887889679999999964798899970676