HHsearch alignment for GI: 254781099 and conserved domain: TIGR03453
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=94.33 E-value=0.033 Score=34.33 Aligned_cols=36 Identities=36% Similarity=0.426 Sum_probs=31.5
Q ss_pred CCCCCEEEEE---CCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 5688689960---34575215789999998731000000
Q gi|254781099|r 110 SLQSPFIAVT---GTNGKSSTVALISHVLRKNGYDVQLG 145 (468)
Q Consensus 110 ~~~~~vI~VT---GT~GKTTt~~ll~~iL~~~g~~~~~~ 145 (468)
T Consensus 101 g~~~~VIav~N~KGGVGKTTtav~LA~~LA~~G~RVLvI 139 (387)
T TIGR03453 101 GEHLQVIAVTNFKGGSGKTTTSAHLAQYLALRGYRVLAI 139 (387)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 998808999788876569999999999999779988999