HHsearch alignment for GI: 254781099 and conserved domain: cd01080
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.64 E-value=0.021 Score=35.69 Aligned_cols=120 Identities=16% Similarity=0.217 Sum_probs=75.6
Q ss_pred HHCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCHHHHH-HHHCCCEEEC-CCCC----CCCCCCEEEECCCCCCC
Q ss_conf 2189879998368-54899999999859869998189647889-9978989964-5315----72258889988886856
Q gi|254781099|r 5 SFRNHSIAVFGLG-RSGLSAACALKDSGVHVIAWDDHPCAVKQ-AKDMGIEVID-FREI----PWSIISFLVLSPGIALT 77 (468)
Q Consensus 5 ~~~~k~v~i~G~G-~sG~s~A~~l~~~G~~V~~~D~~~~~~~~-l~~~g~~~~~-~~~~----~~~~~d~vv~Spgi~~~ 77 (468)
T Consensus 41 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIsA~G~~~li~~~~vk~gavvIDvGin~~ 120 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINRV 120 (168)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCEEEEECCCCCCCCHHHCCCCCEEEECCCCCC
T ss_conf 87785699987873008999999984899799976898897997410453554158766378999589988996665423
Q ss_pred CCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 7557888999997698099830342233430156886899603457521578999999873
Q gi|254781099|r 78 GENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAVTGTNGKSSTVALISHVLRKN 138 (468)
Q Consensus 78 ~~~~~~~~~~a~~~gi~v~s~~el~~~~~~~~~~~~~vI~VTGT~GKTTt~~ll~~iL~~~ 138 (468)
T Consensus 121 ~~----------~~~~kl~GDvd~~~-v~~~a~~i---TPVPGGVGpmTva~L~~N~v~aa 167 (168)
T cd01080 121 PD----------KSGGKLVGDVDFES-AKEKASAI---TPVPGGVGPMTVAMLMKNTVEAA 167 (168)
T ss_pred CC----------CCCCEEECCCCHHH-HHHHCEEE---CCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 34----------88984637788899-98646386---89999608999999999999982