>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

Probab=97.05 E-value=0.018 Score=36.21 Aligned_cols=108 Identities=20% Similarity=0.255 Sum_probs=63.7 Q ss_pred HHHCCCEEEEECCCHHHHHHHHHHHHCCCEE-EEEECC----------CHHHHHHHHCCCEE-------ECCCCCCCCCC Q ss_conf 3218987999836854899999999859869-998189----------64788999789899-------64531572258 Q gi|254781099|r 4 SSFRNHSIAVFGLGRSGLSAACALKDSGVHV-IAWDDH----------PCAVKQAKDMGIEV-------IDFREIPWSII 65 (468) Q Consensus 4 ~~~~~k~v~i~G~G~sG~s~A~~l~~~G~~V-~~~D~~----------~~~~~~l~~~g~~~-------~~~~~~~~~~~ 65 (468) T Consensus 19 ~~l~g~~vaVqGfGnVG~~~a~~l~~~GakvvavsD~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (217) T cd05211 19 DSLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSARVKVQDYFPGEAILGLDV 98 (217) T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC T ss_conf 68579999998988999999999998599899998578717789998699999999818965366653059865003677 Q ss_pred CEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH Q ss_conf 889988886856755788899999769809983034223343015688689960345752157899999987310 Q gi|254781099|r 66 SFLVLSPGIALTGENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAVTGTNGKSSTVALISHVLRKNGY 140 (468) Q Consensus 66 d~vv~Spgi~~~~~~~~~~~~~a~~~gi~v~s~~el~~~~~~~~~~~~~vI~VTGT~GKTTt~~ll~~iL~~~g~ 140 (468) T Consensus 99 DIliPa-Al~~~I~-----~~~a~~--------------------i~ak~I-~EgAN~P~t~ea--~~iL~~rgI 144 (217) T cd05211 99 DIFAPC-ALGNVID-----LENAKK--------------------LKAKVV-AEGANNPTTDEA--LRILHERGI 144 (217) T ss_pred CEEEEC-CCCCCCC-----HHHHHH--------------------HCCEEE-ECCCCCCCCHHH--HHHHHHCCC T ss_conf 689642-4458879-----899987--------------------177289-506789989789--999997899

HHsearch alignment for GI: 254781099 and conserved domain: cd05211