HHsearch alignment for GI: 254781099 and conserved domain: cd05212
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.57 E-value=0.038 Score=33.96 Aligned_cols=108 Identities=19% Similarity=0.307 Sum_probs=63.3
Q ss_pred HHCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCHHHHH-HHHCCCEEEC-CCCC----CCCCCCEEEECCCCCCC
Q ss_conf 218987999836-854899999999859869998189647889-9978989964-5315----72258889988886856
Q gi|254781099|r 5 SFRNHSIAVFGL-GRSGLSAACALKDSGVHVIAWDDHPCAVKQ-AKDMGIEVID-FREI----PWSIISFLVLSPGIALT 77 (468)
Q Consensus 5 ~~~~k~v~i~G~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~-l~~~g~~~~~-~~~~----~~~~~d~vv~Spgi~~~ 77 (468)
T Consensus 25 ~l~Gk~vvVvGrS~~VG~Pla~lL~~~~atVt~~hs~t~~l~~~~~~ADIvI~a~G~p~~i~~~~vk~GavvIDvGi~~~ 104 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSKVHDADVVVVGSPKPEKVPTEWIKPGATVINCSPTKL 104 (140)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCEEEECCCCCCCCCHHHCCCCCEEEEECCCCC
T ss_conf 99999999999981249999999997889899946999598998523499998168767278977679988998037756
Q ss_pred CCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 7557888999997698099830342233430156886899603457521578999999873
Q gi|254781099|r 78 GENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAVTGTNGKSSTVALISHVLRKN 138 (468)
Q Consensus 78 ~~~~~~~~~~a~~~gi~v~s~~el~~~~~~~~~~~~~vI~VTGT~GKTTt~~ll~~iL~~~ 138 (468)
T Consensus 105 ~~~-------------------~v~----~~a~~---iTPVPGGVGP~Tva~L~~N~v~a~ 139 (140)
T cd05212 105 SGD-------------------DVK----ESASL---YVPMTGGVGKLTVAMRMQNMVRSV 139 (140)
T ss_pred CCH-------------------HHH----CEEEE---ECCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 772-------------------144----16528---778999546999999999999970