HHsearch alignment for GI: 254781099 and conserved domain: cd05290
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.33 E-value=0.077 Score=31.83 Aligned_cols=68 Identities=12% Similarity=0.117 Sum_probs=45.3
Q ss_pred EEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCHHH----HHHHH----CC---CEEECCCCCCCCCCCEEEECCCCCC
Q ss_conf 79998368548999999998598--699981896478----89997----89---8996453157225888998888685
Q gi|254781099|r 10 SIAVFGLGRSGLSAACALKDSGV--HVIAWDDHPCAV----KQAKD----MG---IEVIDFREIPWSIISFLVLSPGIAL 76 (468)
Q Consensus 10 ~v~i~G~G~sG~s~A~~l~~~G~--~V~~~D~~~~~~----~~l~~----~g---~~~~~~~~~~~~~~d~vv~Spgi~~ 76 (468)
T Consensus 1 KI~IIGaG~VG~~~A~~l~~~~~~~elvL~Di~~~~a~g~a~Dl~h~~~~~~~~~~~~~~~~y~~~~~aDiVVitaG~~~ 80 (307)
T cd05290 1 KLVVIGAGHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGPSI 80 (307)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHCCCCEEEECCCCCC
T ss_conf 98999969899999999985699887999928898237999987612035899865866799899469999998677765
Q ss_pred C
Q ss_conf 6
Q gi|254781099|r 77 T 77 (468)
Q Consensus 77 ~ 77 (468)
T Consensus 81 k 81 (307)
T cd05290 81 D 81 (307)
T ss_pred C
T ss_conf 8