HHsearch alignment for GI: 254781099 and conserved domain: cd05294
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=94.18 E-value=0.23 Score=28.53 Aligned_cols=70 Identities=16% Similarity=0.204 Sum_probs=44.5
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCC--EEEEEECCCHH--H----HHHHH----CC--CEEECCC-CCCCCCCCEEEECCC
Q ss_conf 7999836-8548999999998598--69998189647--8----89997----89--8996453-157225888998888
Q gi|254781099|r 10 SIAVFGL-GRSGLSAACALKDSGV--HVIAWDDHPCA--V----KQAKD----MG--IEVIDFR-EIPWSIISFLVLSPG 73 (468)
Q Consensus 10 ~v~i~G~-G~sG~s~A~~l~~~G~--~V~~~D~~~~~--~----~~l~~----~g--~~~~~~~-~~~~~~~d~vv~Spg 73 (468)
T Consensus 2 KV~IiGAaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~d~~~~~daDivVitAG 81 (309)
T cd05294 2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLSDVAGSDIVIITAG 81 (309)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEHHHHCCCCCCCCCCEEEECCCHHHHCCCCEEEECCC
T ss_conf 89999999769999999998379987599960556434231123554503433688767982798899689999998789
Q ss_pred CCCCCC
Q ss_conf 685675
Q gi|254781099|r 74 IALTGE 79 (468)
Q Consensus 74 i~~~~~ 79 (468)
T Consensus 82 ~~rk~g 87 (309)
T cd05294 82 VPRKEG 87 (309)
T ss_pred CCCCCC
T ss_conf 889959