RPSBLAST alignment for GI: 254781099 and conserved domain: TIGR01087

>gnl|CDD|162197 TIGR01087, murD, UDP-N-acetylmuramoylalanine--D-glutamate ligase. Length = 433
 Score =  309 bits (794), Expect = 8e-85
 Identities = 141/453 (31%), Positives = 206/453 (45%), Gaps = 38/453 (8%)

Query: 11  IAVFGLGRSGLSAACALKDSGVHVIAWDDHP-----CAVKQAKDMGIEVIDFREIP--WS 63
           I + GLG++G + A  L   G  V   D  P      ++ Q +     V+         +
Sbjct: 2   ILILGLGKTGRAVARFLHKKGAEVTVTDLKPNEELEPSMGQLRLNEGSVLHTGLHLEDLN 61

Query: 64  IISFLVLSPGIALTGENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAVTGTNG 123
               +V SPGI       H  V+ A +  + ++GDIELF+R      L  P +A+TGTNG
Sbjct: 62  NADLVVKSPGIPP----DHPLVQAAAKRGIPVVGDIELFLR---LVPL--PVVAITGTNG 112

Query: 124 KSSTVALISHVLRKNGYDVQLGGNIGLPILNLEYFSPNRFYVIECSSYQIELTPTIDPSI 183
           K++T +L+ H+L+  G    LGGNIG P L +        YV+E SS+Q+E T ++ P I
Sbjct: 113 KTTTTSLLYHLLKAAGLKAFLGGNIGTPALEVLDQEGAELYVLELSSFQLETTESLRPEI 172

Query: 184 GVLLNISPDHLDRHHTLENYVNIKKKIVT-MSKHAIICINDHQCEKIAYDMNFIGHSISR 242
            ++LNIS DHLD H + E+YV  K KI    ++  +  +N                 I  
Sbjct: 173 ALILNISEDHLDWHGSFEDYVAAKLKIFARQTEGDVAVLNADDPRFARLAQKSKAQVIWF 232

Query: 243 ISSQSLQSDSDLYIDESFLKCSATSEVIFDFSQETK---KHNIQNLVTSAVVCMQLGLKV 299
              +  +    +     +LK             E      HN +N++ +  +   LGL +
Sbjct: 233 SVEKDAERGLCIRDGGLYLK---------PNDLEGSLLGLHNAENILAAIALAKSLGLNL 283

Query: 300 EEIKRALLSCGGLTHRLQTIARLGHVIFINDSKATNLHSVIHAFLNEKRRIYWIAGGLSK 359
           E I  AL S  GL HRL+ + +   V F NDSKATN+H+ + A       +  I GG  K
Sbjct: 284 EAILEALRSFKGLPHRLEYVGQKNGVHFYNDSKATNVHATLAALSAFDNPVILIVGGDDK 343

Query: 360 SDDFSTLFPFISKIAK-AYFIGNSAMLF--FHHFGGKINSTLSKTLDQALKSVVRDVENV 416
             DFS L P  +   K    IG  A              + LS  L ++L+  V+    V
Sbjct: 344 GADFSPLAPAAAGKVKAVLAIGEDAAKIAPLLK-----EAGLSVYLVESLEEAVQAAREV 398

Query: 417 -QLPSIVLFSPGCASFDQYNNFRERGFSFMSQV 448
                +VL SP CASFDQ+ ++ ERG  F   V
Sbjct: 399 ASPGDVVLLSPACASFDQFKSYEERGEKFKELV 431