RPSBLAST alignment for GI: 254781099 and conserved domain: TIGR01087
>gnl|CDD|162197 TIGR01087, murD, UDP-N-acetylmuramoylalanine--D-glutamate ligase. Length = 433
Score = 309 bits (794), Expect = 8e-85
Identities = 141/453 (31%), Positives = 206/453 (45%), Gaps = 38/453 (8%)
Query: 11 IAVFGLGRSGLSAACALKDSGVHVIAWDDHP-----CAVKQAKDMGIEVIDFREIP--WS 63
I + GLG++G + A L G V D P ++ Q + V+ +
Sbjct: 2 ILILGLGKTGRAVARFLHKKGAEVTVTDLKPNEELEPSMGQLRLNEGSVLHTGLHLEDLN 61
Query: 64 IISFLVLSPGIALTGENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAVTGTNG 123
+V SPGI H V+ A + + ++GDIELF+R L P +A+TGTNG
Sbjct: 62 NADLVVKSPGIPP----DHPLVQAAAKRGIPVVGDIELFLR---LVPL--PVVAITGTNG 112
Query: 124 KSSTVALISHVLRKNGYDVQLGGNIGLPILNLEYFSPNRFYVIECSSYQIELTPTIDPSI 183
K++T +L+ H+L+ G LGGNIG P L + YV+E SS+Q+E T ++ P I
Sbjct: 113 KTTTTSLLYHLLKAAGLKAFLGGNIGTPALEVLDQEGAELYVLELSSFQLETTESLRPEI 172
Query: 184 GVLLNISPDHLDRHHTLENYVNIKKKIVT-MSKHAIICINDHQCEKIAYDMNFIGHSISR 242
++LNIS DHLD H + E+YV K KI ++ + +N I
Sbjct: 173 ALILNISEDHLDWHGSFEDYVAAKLKIFARQTEGDVAVLNADDPRFARLAQKSKAQVIWF 232
Query: 243 ISSQSLQSDSDLYIDESFLKCSATSEVIFDFSQETK---KHNIQNLVTSAVVCMQLGLKV 299
+ + + +LK E HN +N++ + + LGL +
Sbjct: 233 SVEKDAERGLCIRDGGLYLK---------PNDLEGSLLGLHNAENILAAIALAKSLGLNL 283
Query: 300 EEIKRALLSCGGLTHRLQTIARLGHVIFINDSKATNLHSVIHAFLNEKRRIYWIAGGLSK 359
E I AL S GL HRL+ + + V F NDSKATN+H+ + A + I GG K
Sbjct: 284 EAILEALRSFKGLPHRLEYVGQKNGVHFYNDSKATNVHATLAALSAFDNPVILIVGGDDK 343
Query: 360 SDDFSTLFPFISKIAK-AYFIGNSAMLF--FHHFGGKINSTLSKTLDQALKSVVRDVENV 416
DFS L P + K IG A + LS L ++L+ V+ V
Sbjct: 344 GADFSPLAPAAAGKVKAVLAIGEDAAKIAPLLK-----EAGLSVYLVESLEEAVQAAREV 398
Query: 417 -QLPSIVLFSPGCASFDQYNNFRERGFSFMSQV 448
+VL SP CASFDQ+ ++ ERG F V
Sbjct: 399 ASPGDVVLLSPACASFDQFKSYEERGEKFKELV 431