RPSBLAST alignment for GI: 254781099 and conserved domain: PRK00141
>gnl|CDD|178896 PRK00141, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 473
Score = 148 bits (375), Expect = 3e-36
Identities = 132/468 (28%), Positives = 213/468 (45%), Gaps = 46/468 (9%)
Query: 1 MKLSSFRNHSIAVFGLGRSGLSAACALKDSGVHVIAWDDHPCAV-KQAKDMGIEVIDFRE 59
L + + V G G SG A L + G V+ DD+ A K + G+ I E
Sbjct: 8 SALPQELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAE 67
Query: 60 IPWSIISF--LVLSPGIALTGENAHW-----CVKLANQFNVEIIGDIELFVRERRFSSLQ 112
+ SF +V SPG W + A +E+IGD+EL R +
Sbjct: 68 ASDQLDSFSLVVTSPG---------WRPDSPLLVDAQSQGLEVIGDVELAWRLDQAGVFG 118
Query: 113 SP--FIAVTGTNGKSSTVALISHVLRKNGYDVQLGGNIGLPI---LNLEYFSPNR--FYV 165
P ++AVTGTNGK++T A+++ ++++ G+ Q GNIG+P+ L + R V
Sbjct: 119 EPRTWLAVTGTNGKTTTTAMLAAMMQEGGFAAQAVGNIGVPVSAALV----AQPRIDVLV 174
Query: 166 IECSSYQIELTPTIDPSIGVLLNISPDHLDRHHTLENYVNIKKKIVTMSKHAIICINDHQ 225
E SS+Q+ +PT+ P +GV+LN++ DH+D H ++ +Y K K++ A+I +D
Sbjct: 175 AELSSFQLHWSPTLTPDVGVVLNLAEDHIDWHGSMRDYAADKAKVLR-GPVAVIGADDEY 233
Query: 226 CEKIAYDM---NFIGHSISRISSQSLQSDSDLYIDESFLKCS--ATSEVIFDFSQETKKH 280
++ IG ++ ++ + +D +F + A++E I
Sbjct: 234 VVQLTSAADLSGLIGFTMGEPAAGQVGVRDGELVDNAFGQNVVLASAEGI----SPAGPA 289
Query: 281 NIQNLVTSAVVCMQLGLKVEEIKRALLSCGGLTHRLQTIARLGHVIFINDSKATNLHSVI 340
+ + + +A V G+ E I RAL S HR Q +A G V +I++SKATN H+
Sbjct: 290 GVLDALAAAAVARSQGVAPEAIARALSSFEVAGHRGQVVAEHGGVTWIDNSKATNPHAAD 349
Query: 341 HAFLNEKRRIYWIAGGLSKSDDFSTLFPFIS-KIAKAYFIGNS-----AMLFFHHFGGKI 394
A L + W+AGG K D L + +I A +G A L H +
Sbjct: 350 AA-LAGHESVVWVAGGQLKGADIDDLIRTHAPRIKAAVVLGVDRAEIVAALAEHAPDAPV 408
Query: 395 NSTLSKTLDQALKSVVRDVENVQLP-SIVLFSPGCASFDQYNNFRERG 441
T S ++A++ V ++ P VL +P AS D Y +RG
Sbjct: 409 TVTDSTDPEEAMEEAVSAAVSLAEPGDTVLLAPAAASLDMYTGMGQRG 456