RPSBLAST alignment for GI: 254781099 and conserved domain: PRK00683
>gnl|CDD|179086 PRK00683, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 418
Score = 156 bits (396), Expect = 1e-38
Identities = 126/462 (27%), Positives = 200/462 (43%), Gaps = 70/462 (15%)
Query: 8 NHSIAVFGLGRSGLSAACALKDSGVHVIAWDD-----HPCAVKQAKD-MGIEVIDFREIP 61
+ V GLG +G S A L GV+VI D C + E E P
Sbjct: 3 LQRVVVLGLGVTGKSIARFLAQKGVYVIGVDKSLEALQSCPYIHERYLENAE-----EFP 57
Query: 62 WSIISFLVLSPGIALTGENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAVTGT 121
+ +V SPGI + H V+ A ++ ++ DI+L + F+ + P + +TG+
Sbjct: 58 -EQVDLVVRSPGI----KKEHPWVQAAIASHIPVVTDIQLAFQTPEFT--RYPSLGITGS 110
Query: 122 NGKSSTVALISHVLRKNGYDVQLGGNIGLPILNLEYFSPNRFYVIECSSYQIELTPTIDP 181
GK++T+ + H+L++ G GNIG+PIL+ R V+E SS+Q+ P
Sbjct: 111 TGKTTTILFLEHLLKRLGIPAFAMGNIGIPILDGMQQPGVR--VVEISSFQLADQEKSYP 168
Query: 182 --SIGVLLNISPDHLDRHHTLENYVNIKKKIVTMSKHAIICINDHQCEKIAYDMNFIGHS 239
S G++LNIS +HLD H L Y K+ I
Sbjct: 169 VLSGGMILNISDNHLDYHGNLSAYFQAKQNI----------------------------- 199
Query: 240 ISRISSQSLQSDSDLYIDE------SFLKCSATSEVIFDFSQETKK---HNIQNLVTSAV 290
++ L++ DL++ + S+L+ + D K H+ N +
Sbjct: 200 -----AKCLRNPDDLWVGDERSYGHSYLEYVQEIMRLLDKGSALKPLYLHDRYNYCAAYA 254
Query: 291 VCMQLG-LKVEEIKRALLSCGGLTHRLQTIARLGHVIFINDSKATNLHSVIHAFLNEKRR 349
+ ++ + E A+ + HR++ + V +INDSKAT + +V A L +
Sbjct: 255 LANEVFPISEESFLEAVATFEKPPHRMEYLGEKDGVHYINDSKATTVSAVEKALLAVGNQ 314
Query: 350 IYWIAGGLSKSDDFSTLFPFISKIAKAYF-IGNSAMLFFHHFGGKINSTLSKTLDQALKS 408
+ I GG +K DFS+L P + + AK +G K T+ K L +A+ S
Sbjct: 315 VIVILGGRNKGCDFSSLLPVLRQTAKHVVAMGECRQEIAQALSEKFPLTVVKDLQEAV-S 373
Query: 409 VVRDVENVQLPSIVLFSPGCASFDQYNNFRERGFSFMSQVSE 450
+ E Q ++L SPGCASFDQ+ +F ERG F V
Sbjct: 374 CAQ--EIAQPGDVILLSPGCASFDQFRSFEERGAMFKQLVGM 413