RPSBLAST alignment for GI: 254781099 and conserved domain: PRK00683

>gnl|CDD|179086 PRK00683, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 418
 Score =  156 bits (396), Expect = 1e-38
 Identities = 126/462 (27%), Positives = 200/462 (43%), Gaps = 70/462 (15%)

Query: 8   NHSIAVFGLGRSGLSAACALKDSGVHVIAWDD-----HPCAVKQAKD-MGIEVIDFREIP 61
              + V GLG +G S A  L   GV+VI  D        C     +     E     E P
Sbjct: 3   LQRVVVLGLGVTGKSIARFLAQKGVYVIGVDKSLEALQSCPYIHERYLENAE-----EFP 57

Query: 62  WSIISFLVLSPGIALTGENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAVTGT 121
              +  +V SPGI    +  H  V+ A   ++ ++ DI+L  +   F+  + P + +TG+
Sbjct: 58  -EQVDLVVRSPGI----KKEHPWVQAAIASHIPVVTDIQLAFQTPEFT--RYPSLGITGS 110

Query: 122 NGKSSTVALISHVLRKNGYDVQLGGNIGLPILNLEYFSPNRFYVIECSSYQIELTPTIDP 181
            GK++T+  + H+L++ G      GNIG+PIL+       R  V+E SS+Q+       P
Sbjct: 111 TGKTTTILFLEHLLKRLGIPAFAMGNIGIPILDGMQQPGVR--VVEISSFQLADQEKSYP 168

Query: 182 --SIGVLLNISPDHLDRHHTLENYVNIKKKIVTMSKHAIICINDHQCEKIAYDMNFIGHS 239
             S G++LNIS +HLD H  L  Y   K+ I                             
Sbjct: 169 VLSGGMILNISDNHLDYHGNLSAYFQAKQNI----------------------------- 199

Query: 240 ISRISSQSLQSDSDLYIDE------SFLKCSATSEVIFDFSQETKK---HNIQNLVTSAV 290
                ++ L++  DL++ +      S+L+       + D     K    H+  N   +  
Sbjct: 200 -----AKCLRNPDDLWVGDERSYGHSYLEYVQEIMRLLDKGSALKPLYLHDRYNYCAAYA 254

Query: 291 VCMQLG-LKVEEIKRALLSCGGLTHRLQTIARLGHVIFINDSKATNLHSVIHAFLNEKRR 349
           +  ++  +  E    A+ +     HR++ +     V +INDSKAT + +V  A L    +
Sbjct: 255 LANEVFPISEESFLEAVATFEKPPHRMEYLGEKDGVHYINDSKATTVSAVEKALLAVGNQ 314

Query: 350 IYWIAGGLSKSDDFSTLFPFISKIAKAYF-IGNSAMLFFHHFGGKINSTLSKTLDQALKS 408
           +  I GG +K  DFS+L P + + AK    +G            K   T+ K L +A+ S
Sbjct: 315 VIVILGGRNKGCDFSSLLPVLRQTAKHVVAMGECRQEIAQALSEKFPLTVVKDLQEAV-S 373

Query: 409 VVRDVENVQLPSIVLFSPGCASFDQYNNFRERGFSFMSQVSE 450
             +  E  Q   ++L SPGCASFDQ+ +F ERG  F   V  
Sbjct: 374 CAQ--EIAQPGDVILLSPGCASFDQFRSFEERGAMFKQLVGM 413