RPSBLAST alignment for GI: 254781099 and conserved domain: PRK01368

>gnl|CDD|179286 PRK01368, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 454
 Score =  269 bits (690), Expect = 1e-72
 Identities = 161/460 (35%), Positives = 239/460 (51%), Gaps = 37/460 (8%)

Query: 3   LSSFRNHSIAVFGLGRSGLSAACALKDSGVHVIAWDDHPCA----VKQAKDMGIEVIDFR 58
           ++S     I VFGLG++G+S    L+ +   VI +DD         +      I  +   
Sbjct: 1   MNSHTKQKIGVFGLGKTGISVYEELQ-NKYDVIVYDDLKANRDIFEELYSKNAIAALS-- 57

Query: 59  EIPWSIISFLVLSPGIALTGENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAV 118
           +  W  +  +VLSPGI LT    H  VK+A  FN+ I  DI+L   +    S    FIA+
Sbjct: 58  DSRWQNLDKIVLSPGIPLT----HEIVKIAKNFNIPITSDIDLLFEK----SKNLKFIAI 109

Query: 119 TGTNGKSSTVALISHVLRKNGYDVQLGGNIGLPILNLEYFSPNRFYVIECSSYQIELTPT 178
           TGTNGKS+T ALISH+L  NG D  + GNIG+P L  +  +    YV+E SS+Q++L  T
Sbjct: 110 TGTNGKSTTTALISHILNSNGLDYPVAGNIGVPALQAK--ASKDGYVLELSSFQLDLVKT 167

Query: 179 IDPSIGVLLNISPDHLDRHHTLENYVNIKKKIVT-MSK--HAIICINDHQCEKI------ 229
               I VLLNI+PDHLDRH  ++ Y+  K KI   M K  +A+I I++  C +I      
Sbjct: 168 FTAKIAVLLNITPDHLDRHQDMDGYIAAKSKIFDRMDKDSYAVINIDNDYCREIFIKLQQ 227

Query: 230 AYDMNFIGHSISRISSQSLQSDSDLYIDESFLKCSATSEVIFDFSQETKKHNIQNLVTSA 289
              +  I  S+++I    +    D   D  F     + ++ F+      KHN +N+  S 
Sbjct: 228 EQRIKLIPFSVTKILENGISVVDDKISDNFF--DDISFKLPFN-KNLQGKHNCENIAASY 284

Query: 290 VVCMQLGLKVEEIKRALLSCGGLTHRLQTIARLGHVIFINDSKATNLHSVIHAFLNEKRR 349
            V   +G++ ++I  ++ S   L HR+Q I  + ++ F NDSKATN  S + + +     
Sbjct: 285 AVAKIIGVEPKKILESISSFQSLPHRMQYIGSINNISFYNDSKATNAISAVQS-IKALDN 343

Query: 350 IYWIAGGLSKSDDFSTLFPFISKIAKAYFIGNSAMLFFHHFGG----KINSTLSKTLDQA 405
           IYW+AGG+ K      + P+ SKI KAYF G +  +F +         I   L +  D A
Sbjct: 344 IYWLAGGIPKEGGIEEIKPYFSKIKKAYFYGQAKEIFANTAKNIVDFVICDNLEQAFDLA 403

Query: 406 LKSVVRDVENVQLPSIVLFSPGCASFDQYNNFRERGFSFM 445
            K  V D  N ++ +I L +P C+S+DQ+ NF ERG  F+
Sbjct: 404 YKDAVGD--NAEVKNI-LLAPSCSSYDQFKNFEERGELFI 440