RPSBLAST alignment for GI: 254781099 and conserved domain: PRK01368
>gnl|CDD|179286 PRK01368, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 454
Score = 269 bits (690), Expect = 1e-72
Identities = 161/460 (35%), Positives = 239/460 (51%), Gaps = 37/460 (8%)
Query: 3 LSSFRNHSIAVFGLGRSGLSAACALKDSGVHVIAWDDHPCA----VKQAKDMGIEVIDFR 58
++S I VFGLG++G+S L+ + VI +DD + I +
Sbjct: 1 MNSHTKQKIGVFGLGKTGISVYEELQ-NKYDVIVYDDLKANRDIFEELYSKNAIAALS-- 57
Query: 59 EIPWSIISFLVLSPGIALTGENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAV 118
+ W + +VLSPGI LT H VK+A FN+ I DI+L + S FIA+
Sbjct: 58 DSRWQNLDKIVLSPGIPLT----HEIVKIAKNFNIPITSDIDLLFEK----SKNLKFIAI 109
Query: 119 TGTNGKSSTVALISHVLRKNGYDVQLGGNIGLPILNLEYFSPNRFYVIECSSYQIELTPT 178
TGTNGKS+T ALISH+L NG D + GNIG+P L + + YV+E SS+Q++L T
Sbjct: 110 TGTNGKSTTTALISHILNSNGLDYPVAGNIGVPALQAK--ASKDGYVLELSSFQLDLVKT 167
Query: 179 IDPSIGVLLNISPDHLDRHHTLENYVNIKKKIVT-MSK--HAIICINDHQCEKI------ 229
I VLLNI+PDHLDRH ++ Y+ K KI M K +A+I I++ C +I
Sbjct: 168 FTAKIAVLLNITPDHLDRHQDMDGYIAAKSKIFDRMDKDSYAVINIDNDYCREIFIKLQQ 227
Query: 230 AYDMNFIGHSISRISSQSLQSDSDLYIDESFLKCSATSEVIFDFSQETKKHNIQNLVTSA 289
+ I S+++I + D D F + ++ F+ KHN +N+ S
Sbjct: 228 EQRIKLIPFSVTKILENGISVVDDKISDNFF--DDISFKLPFN-KNLQGKHNCENIAASY 284
Query: 290 VVCMQLGLKVEEIKRALLSCGGLTHRLQTIARLGHVIFINDSKATNLHSVIHAFLNEKRR 349
V +G++ ++I ++ S L HR+Q I + ++ F NDSKATN S + + +
Sbjct: 285 AVAKIIGVEPKKILESISSFQSLPHRMQYIGSINNISFYNDSKATNAISAVQS-IKALDN 343
Query: 350 IYWIAGGLSKSDDFSTLFPFISKIAKAYFIGNSAMLFFHHFGG----KINSTLSKTLDQA 405
IYW+AGG+ K + P+ SKI KAYF G + +F + I L + D A
Sbjct: 344 IYWLAGGIPKEGGIEEIKPYFSKIKKAYFYGQAKEIFANTAKNIVDFVICDNLEQAFDLA 403
Query: 406 LKSVVRDVENVQLPSIVLFSPGCASFDQYNNFRERGFSFM 445
K V D N ++ +I L +P C+S+DQ+ NF ERG F+
Sbjct: 404 YKDAVGD--NAEVKNI-LLAPSCSSYDQFKNFEERGELFI 440