RPSBLAST alignment for GI: 254781099 and conserved domain: PRK03806
>gnl|CDD|179651 PRK03806, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 438
Score = 209 bits (533), Expect = 2e-54
Identities = 141/472 (29%), Positives = 216/472 (45%), Gaps = 78/472 (16%)
Query: 6 FRNHSIAVFGLGRSGLSAACALKDSGVHVIAWDDHPCAVKQAKDMGIEVIDFREIP---- 61
++ + + GLG +GLS GV VID R P
Sbjct: 4 YQGKKVVIIGLGLTGLSCVDFFLARGVTP------------------RVIDTRITPPGLD 45
Query: 62 ----------------WSIISFL-VLSPGIALTGENAHWCVKLANQFNVEIIGDIELFVR 104
W + + L V SPGIAL AH + A +EI+GDIELF R
Sbjct: 46 KLPENVERHTGSLNDEWLLAADLIVASPGIAL----AHPSLSAAADAGIEIVGDIELFCR 101
Query: 105 ERRFSSLQSPFIAVTGTNGKSSTVALISHVLRKNGYDVQLGGNIGLPILNLEYFSPNRFY 164
E Q+P +A+TG+NGKS+ L+ + + G+ V +GGNIGLP L+L Y
Sbjct: 102 E-----AQAPIVAITGSNGKSTVTTLVGEMAKAAGWKVGVGGNIGLPALSL-LDQECELY 155
Query: 165 VIECSSYQIELTPTIDPSIGVLLNISPDHLDRHHT-LENYVNIKKKIVTMSKHAIICIND 223
V+E SS+Q+E T ++ + +LN++ DH+DR+ L+ Y K +I +K ++ +D
Sbjct: 156 VLELSSFQLETTSSLKAAAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADD 215
Query: 224 HQCEKIAYDMNFIGHSISRISSQSLQSDSDL--YIDESFLKCSATSEVIFDFSQE--TKK 279
A M G +S D L E++L+ E + + + + +
Sbjct: 216 ------ALTMPIRGADKRCVSFGVNMGDYHLNRQQGETWLR--VKGEKVLNTKEMKLSGQ 267
Query: 280 HNIQNLVTSAVVCMQLGLKVEEIKRALLSCGGLTHRLQTIARLGHVIFINDSKATNLHSV 339
HN N + + + +G+ +AL + GL HR Q + V +INDSKATN+ S
Sbjct: 268 HNYTNALAALALADAVGIPRASSLKALTTFTGLPHRFQLVLEHNGVRWINDSKATNVGST 327
Query: 340 IHAF--LNEKRRIYWIAGGLSKSDDFSTLFPFISKIA-KAYFIG----NSAMLFFHHFGG 392
A L+ ++ + GG KS DFS L +++ + Y G A L
Sbjct: 328 EAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNIRLYCFGRDGAQLAAL------R 381
Query: 393 KINSTLSKTLDQALKSVVRDVENVQLPSIVLFSPGCASFDQYNNFRERGFSF 444
S L++T++QA++ + VQ +VL SP CAS DQ+ NF +RG F
Sbjct: 382 PEVSQLTETMEQAMRLIAP---RVQPGDMVLLSPACASLDQFKNFEQRGNEF 430