RPSBLAST alignment for GI: 254781099 and conserved domain: PRK03806

>gnl|CDD|179651 PRK03806, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 438
 Score =  209 bits (533), Expect = 2e-54
 Identities = 141/472 (29%), Positives = 216/472 (45%), Gaps = 78/472 (16%)

Query: 6   FRNHSIAVFGLGRSGLSAACALKDSGVHVIAWDDHPCAVKQAKDMGIEVIDFREIP---- 61
           ++   + + GLG +GLS        GV                     VID R  P    
Sbjct: 4   YQGKKVVIIGLGLTGLSCVDFFLARGVTP------------------RVIDTRITPPGLD 45

Query: 62  ----------------WSIISFL-VLSPGIALTGENAHWCVKLANQFNVEIIGDIELFVR 104
                           W + + L V SPGIAL    AH  +  A    +EI+GDIELF R
Sbjct: 46  KLPENVERHTGSLNDEWLLAADLIVASPGIAL----AHPSLSAAADAGIEIVGDIELFCR 101

Query: 105 ERRFSSLQSPFIAVTGTNGKSSTVALISHVLRKNGYDVQLGGNIGLPILNLEYFSPNRFY 164
           E      Q+P +A+TG+NGKS+   L+  + +  G+ V +GGNIGLP L+L        Y
Sbjct: 102 E-----AQAPIVAITGSNGKSTVTTLVGEMAKAAGWKVGVGGNIGLPALSL-LDQECELY 155

Query: 165 VIECSSYQIELTPTIDPSIGVLLNISPDHLDRHHT-LENYVNIKKKIVTMSKHAIICIND 223
           V+E SS+Q+E T ++  +   +LN++ DH+DR+   L+ Y   K +I   +K  ++  +D
Sbjct: 156 VLELSSFQLETTSSLKAAAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADD 215

Query: 224 HQCEKIAYDMNFIGHSISRISSQSLQSDSDL--YIDESFLKCSATSEVIFDFSQE--TKK 279
                 A  M   G     +S      D  L     E++L+     E + +  +   + +
Sbjct: 216 ------ALTMPIRGADKRCVSFGVNMGDYHLNRQQGETWLR--VKGEKVLNTKEMKLSGQ 267

Query: 280 HNIQNLVTSAVVCMQLGLKVEEIKRALLSCGGLTHRLQTIARLGHVIFINDSKATNLHSV 339
           HN  N + +  +   +G+      +AL +  GL HR Q +     V +INDSKATN+ S 
Sbjct: 268 HNYTNALAALALADAVGIPRASSLKALTTFTGLPHRFQLVLEHNGVRWINDSKATNVGST 327

Query: 340 IHAF--LNEKRRIYWIAGGLSKSDDFSTLFPFISKIA-KAYFIG----NSAMLFFHHFGG 392
             A   L+    ++ + GG  KS DFS L  +++    + Y  G      A L       
Sbjct: 328 EAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNIRLYCFGRDGAQLAAL------R 381

Query: 393 KINSTLSKTLDQALKSVVRDVENVQLPSIVLFSPGCASFDQYNNFRERGFSF 444
              S L++T++QA++ +      VQ   +VL SP CAS DQ+ NF +RG  F
Sbjct: 382 PEVSQLTETMEQAMRLIAP---RVQPGDMVLLSPACASLDQFKNFEQRGNEF 430