RPSBLAST alignment for GI: 254781099 and conserved domain: PRK04690

>gnl|CDD|179872 PRK04690, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 468

 Score =  159 bits (405), Expect = 9e-40
 Identities = 124/494 (25%), Positives = 207/494 (41%), Gaps = 69/494 (13%)

Query: 1   MKLSSFRNHSIAVFGLGRSGLSAACALKDSGVHVIAWDDHPCAVKQAKDMGIEV------ 54
           M++S      +A++G GR G +A  AL+       A     C   +A+++G         
Sbjct: 1   MRISQLEGRRVALWGWGREGRAAYRALRAHLPAQ-ALTLF-CNAVEAREVGALADAALLV 58

Query: 55  ---IDFREIPWSIISFLVLSPGIALTGENAHWCVKLANQFNVEIIGDIELFVRERRFSSL 111
                 + +  +    +V SPGI+         +  A +     IG   L+  E      
Sbjct: 59  ETEASAQRL--AAFDVVVKSPGISPYRP---EALAAAAR-GTPFIGGTALWFAEHAARDG 112

Query: 112 QSPF-IAVTGTNGKSSTVALISHVLRKNGYDVQLGGNIGLPILNLEYFSPN-RFYVIECS 169
             P  + VTGT GKS+T AL++H+LR  G+   L GNIG+P+L +    P   ++ IE S
Sbjct: 113 VVPGTVCVTGTKGKSTTTALLAHLLRAAGHRTALVGNIGVPLLEVLAPQPAPEYWAIELS 172

Query: 170 SYQI-ELTPT-IDPSIGVLLNISPDHLDRHHTLENYVNIKKKIVTMSKHAIICINDHQCE 227
           SYQ  ++  +   P + V+LN+ P+HLD H     Y   K  +VT  +  I  +N     
Sbjct: 173 SYQTGDVARSGARPELAVVLNLFPEHLDWHGGEARYYRDKLSLVTEGRPRIALLN----- 227

Query: 228 KIAYDMNFIGHSISRISSQSLQSDSDL----YIDESFLKCSAT---SEVIFDFSQE--TK 278
             A D         R+++  L  DS++    + D   ++        + +FD +      
Sbjct: 228 --AAD--------PRLAALQL-PDSEVVWFNHPDGWHVRGDVVYRGEQALFDTALVPLPG 276

Query: 279 KHNIQNLVTSAVVCMQLGLKVEEIKRALLSCGGLTHRLQTIARLGHVIFINDSKATNLHS 338
           +HN  NL         LGL    +  A      L +RLQ +     + ++NDS +T  H+
Sbjct: 277 RHNRGNLCAVLAALEALGLDAVALAPAAAGFRPLPNRLQELGSRDGITYVNDSISTTPHA 336

Query: 339 VIHAF-LNEKRRIYWIAGGLSKSDDFSTLFPFISKIA-----KAYFIGNS-----AMLFF 387
            + A      RR+  + GG  +  D++    F + +A     +   +G +     A+L  
Sbjct: 337 SLAALDCFAGRRVALLVGGHDRGLDWT---DFAAHMAQRAPLEIVTMGANGPRIHALLAP 393

Query: 388 HHFGGKINSTLSKTLDQALKSVVRDVENVQLPSIVLFSPGCASFDQYNNFRERGFSF--- 444
               G+     +  L  A++ + R     Q   +VL SPG  SF  Y ++  RG  F   
Sbjct: 394 LAAAGRFGLHAADDLAHAVR-LARTALGAQ-GGVVLLSPGAPSFGAYRDYVARGRHFAQL 451

Query: 445 ----MSQVSEIPGI 454
                + +S I G+
Sbjct: 452 AGFDPAAISAIAGL 465