HHsearch alignment for GI: 254781100 and conserved domain: COG0472
>COG0472 Rfe UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=0 Score=497.81 Aligned_cols=307 Identities=48% Similarity=0.720 Sum_probs=255.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC-CCH
Q ss_conf 9999999999999999999998899999998622069853887311024657885125778777999999875356-789
Q gi|254781100|r 19 KYVTFRSSAAFFSAMLIVFAFGPKVIDCLRSLQEFRGQPVRVPNLPIHARKIDTPTMGGIIILMGLIGSSLLWADF-SSL 97 (366)
Q Consensus 19 ~~~~fr~~~a~l~sf~i~~~~~~~~I~~l~~~~~~~g~~~r~~~~~~H~~K~~tP~~GGiai~~~~l~~~ll~~~~-~~~ 97 (366)
T Consensus 1 ~~~~~~~--~~i~a~~~s~~~~p~~~~~~~~~~~~--~-~~~~~~k~H~~--~tP~mGGl~I~~~~~~~~~l~~~~~~~~ 73 (319)
T COG0472 1 MYLTFRA--ALIISFVISLILTPILIKFLRKLGLG--D-IPEDGPKSHKK--GTPTMGGLAILLSILLASLLAANLLTNP 73 (319)
T ss_pred CHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCC--C-CCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 9389999--99999999999999999999982324--6-87767545799--9997644999999999999998721222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 8999887789999999874467875313566036889999999999-999986402776655666653377512110000
Q gi|254781100|r 98 HVSIILLLTLSFGLVGFYDDYIKITTGDAGGLSGKVRILIEFIIAI-LAVCALLFYSNSTLLGIETKTSIVFPFFRDIIL 176 (366)
Q Consensus 98 ~~~~~l~~~l~~~liG~iDD~~ki~~~~~~GLs~~~Kl~~Q~i~a~-i~~~~l~~~~~~~~~~~~~~~~~~iPf~~~~~l 176 (366)
T Consensus 74 ~~~~~ll~~~~~~~iG~lDD~~~l--------~~~~r~l~~~~~a~~~~~~~~~~~~~~~------~~~~~~~~~~~--- 136 (319)
T COG0472 74 YVWLVLLGLLGFGLIGFLDDRLKL--------SPKIRGLIQKLKALLLIIALGELPIKFL------DIPLGIPFFKL--- 136 (319)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCCCHHHH---
T ss_conf 899999999999999999727650--------3888679999999999999998878744------56433307887---
Q ss_pred CCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 000-1222202357889985987521111665798999999999976414753466664101478834678998886778
Q gi|254781100|r 177 DMG-LFFIPFAAFVIVATANAVNLTDGLDGLAIVPVMIASVAFSFIAYVAGNILLSHYLQVNFVPGVGELVVVISALIGA 255 (366)
Q Consensus 177 ~lg-~l~i~~~~~~ivg~~NavNl~DGlDGLa~g~~~i~~~~l~ii~~~~g~~~~~~~~~~~~~~~~~~l~i~~~~l~Ga 255 (366)
T Consensus 137 -~~~~~~~~~~~~~ivg~sNAvNl~DGlDGLa~g~~~i~~~~~~~i~~~~~~~---------------~~~~~~~al~ga 200 (319)
T COG0472 137 -PGPLLFILFAVFAIVGASNAVNLTDGLDGLAAGLSAIALLALALIALLQGLG---------------ELALICAALAGA 200 (319)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCH---------------HHHHHHHHHHHH
T ss_conf -8999999999999999978999862650278899999999999999983216---------------799999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHCCCCCC-CCCHHHH
Q ss_conf 8898885567410016461088799999999999624589999999--999999999999999986088766-6781228
Q gi|254781100|r 256 GIGFLWFNISPAVIFMGDTGSLALGAFIGGIAVSTKHEILLIIIGG--LFVVETLSVIMQVGYFKMTKKRVF-LMAPIHH 332 (366)
Q Consensus 256 ~lgFL~fN~~PAkIFmGD~GS~~LG~~la~~ai~~~~~~~l~ii~~--i~i~~~~sviiq~~~~k~~~kr~f-~~~plHH 332 (366)
T Consensus 201 ~LGFL~~N~~PAkIFmGDtGSl~LG~~la~iail~~~~~~l~~~~~~~v~v~et~~vil~r~~~~~-~~~~~~~~~~~HH 279 (319)
T COG0472 201 CLGFLWFNFYPAKIFMGDTGSLALGAALAAIALLLKQEILLAIIGPLGVPVIETLSVILRRLSFKL-KPIRLPDMAHLHH 279 (319)
T ss_pred HHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC-CCCCCCCCCCCCH
T ss_conf 887987507850504773656999999999999996058899996305687651313146555277-7777767788628
Q ss_pred HHHHCC---CCCCHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999679---8851589877899999999999862049
Q gi|254781100|r 333 HFEKKG---WTENQIVIRFWIISFIFAVIGLLTLKMR 366 (366)
Q Consensus 333 ~l~~~G---~s~~~iv~~~~~i~~~~~~~~i~~~k~~ 366 (366)
T Consensus 280 ~~~~~g~~~~~e~~vv~~~w~i~~i~~~i~l~~~~~~ 316 (319)
T COG0472 280 HLELKGLSEWSERQVVLRFWLISLILALIALLLLKSR 316 (319)
T ss_pred HHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9997476556665211678999999999999996243