HHsearch alignment for GI: 254781100 and conserved domain: cd06853
>cd06853 GT_WecA_like This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.
Probab=100.00 E-value=0 Score=352.83 Aligned_cols=237 Identities=32% Similarity=0.482 Sum_probs=192.0
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 11024657885125778777999999875356---789899988778999999987446787531356603688999999
Q gi|254781100|r 63 LPIHARKIDTPTMGGIIILMGLIGSSLLWADF---SSLHVSIILLLTLSFGLVGFYDDYIKITTGDAGGLSGKVRILIEF 139 (366)
Q Consensus 63 ~~~H~~K~~tP~~GGiai~~~~l~~~ll~~~~---~~~~~~~~l~~~l~~~liG~iDD~~ki~~~~~~GLs~~~Kl~~Q~ 139 (366)
T Consensus 1 Rk~H--~~~tP~~GGi~i~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~iG~~DD~~--------~l~~~~Rl~~q~ 70 (249)
T cd06853 1 RKVH--KGPIPRLGGLAIFLGFLLALLLALLFPFFLLPELLGLLAGATIIVLLGLLDDLF--------DLSPKVKLLGQI 70 (249)
T ss_pred CCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCHHHHHHHHH
T ss_conf 9999--999898119999999999999999863010489999999999999999999830--------598999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999864027766556666533775121100000001222202357889985987521111665798999999999
Q gi|254781100|r 140 IIAILAVCALLFYSNSTLLGIETKTSIVFPFFRDIILDMGLFFIPFAAFVIVATANAVNLTDGLDGLAIVPVMIASVAFS 219 (366)
Q Consensus 140 i~a~i~~~~l~~~~~~~~~~~~~~~~~~iPf~~~~~l~lg~l~i~~~~~~ivg~~NavNl~DGlDGLa~g~~~i~~~~l~ 219 (366)
T Consensus 71 ~~~~l~i~~~~~~~~-----------~~~~~~-~~~~~~~~~~~~~t~~~i~~~iNa~N~iDGidGLa~~~~~i~~~~~~ 138 (249)
T cd06853 71 LAALIVVFGGGVILS-----------LLGPFG-GGIILLGWLSIPLTVLWIVGIINAINLIDGLDGLAGGVALIASLALA 138 (249)
T ss_pred HHHHHHHHHHHHHHH-----------HCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999668876-----------235401-46653789999999999999999999862753024699999999999
Q ss_pred HHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-------
Q ss_conf 9764147534666641014788346789988867788898885567410016461088799999999999624-------
Q gi|254781100|r 220 FIAYVAGNILLSHYLQVNFVPGVGELVVVISALIGAGIGFLWFNISPAVIFMGDTGSLALGAFIGGIAVSTKH------- 292 (366)
Q Consensus 220 ii~~~~g~~~~~~~~~~~~~~~~~~l~i~~~~l~Ga~lgFL~fN~~PAkIFmGD~GS~~LG~~la~~ai~~~~------- 292 (366)
T Consensus 139 ~~~~~~~~~~---------------~~~~~~~l~~~ll~Fl~fN~~~akiFlGD~GS~~lG~~i~~~~i~~~~~~~~~~~ 203 (249)
T cd06853 139 ILALLNGQVL---------------VALLALALAGALLGFLPYNFHPARIFMGDAGSLFLGFLLAVLSILGTQKSSTAIS 203 (249)
T ss_pred HHHHHCCCHH---------------HHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 9999845588---------------9999999999999999870543202157732789999999999999723662688
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHCCC
Q ss_conf 5899999999999999999999999860887666--7812289996798
Q gi|254781100|r 293 EILLIIIGGLFVVETLSVIMQVGYFKMTKKRVFL--MAPIHHHFEKKGW 339 (366)
Q Consensus 293 ~~~l~ii~~i~i~~~~sviiq~~~~k~~~kr~f~--~~plHH~l~~~G~ 339 (366)
T Consensus 204 ~~~~~~~l~~p~~D~~~~~~~R~---~~~~~~~~~d~~H~hh~l~~~G~ 249 (249)
T cd06853 204 PVVPLLILAVPLFDTLFVIIRRL---LRGRSPFQADRDHLHHRLLRLGL 249 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCCCCHHHHHHHCCC
T ss_conf 99999999999999999999999---86999888998668999988769