HHsearch alignment for GI: 254781101 and conserved domain: PRK05439

Probab=95.26  E-value=0.017  Score=35.82  Aligned_cols=27  Identities=48%  Similarity=0.594  Sum_probs=23.1

Q ss_pred             CCEEEEECC--CCCCHHHHHHHHHHHHHH
Q ss_conf             939998303--654201233467777520
Q gi|254781101|r  108 ATIIAITGS--VGKTTTKEMLTIALSSIK  134 (472)
Q Consensus       108 ~~vI~ITGT--nGKTTt~~~l~~iL~~~~  134 (472)
T Consensus        86 PfIIGIaGSVAVGKSTtARlLq~LL~r~~  114 (312)
T PRK05439         86 PFIIGIAGSVAVGKSTTARLLQALLSRWP  114 (312)
T ss_pred             CEEEEEEEEEECCHHHHHHHHHHHHHCCC
T ss_conf             98999762010262889999999995078