HHsearch alignment for GI: 254781101 and conserved domain: PRK11929

>PRK11929 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; Provisional.
Probab=100.00  E-value=0  Score=839.08  Aligned_cols=431  Identities=29%  Similarity=0.410  Sum_probs=397.3

Q ss_pred             CCEEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHH
Q ss_conf             71474677402223789888971688747688899999869889998552124554469728995998999999999998
Q gi|254781101|r   24 QGFVNGISIDSRSIAPQEAFFAIKGPHYDGHDFILHAVQKGAGLVVVNTDMVASIGSLSIPVFGVDDVLGALNKLAVAAR  103 (472)
Q Consensus        24 ~~~i~~i~~dSr~v~~g~lFval~g~~~DGh~~i~~A~~~Ga~~~i~~~~~~~~~~~~~~~~i~v~d~~~al~~la~~~~  103 (472)
T Consensus       511 ~~~~~~isiDSR~v~~GdlFvAlkG~~~DGH~Fi~~Ai~~GA~~~vv~~~~----~~~~~p~I~V~Dt~~AL~~lA~~~r  586 (953)
T PRK11929        511 KEISGAVSTDSRSIGRGEIFVALKGENFDGHAYLPQAFSAGACAAVVAHQV----ADVALPQLVLGDTLAALGRMATAWR  586 (953)
T ss_pred             HHHCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCC----CCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf             876185674377368898899971487777999999998699799992566----6678897996898999999999999


Q ss_pred             HCCCCCEEEEECCCCCCHHHHHHHHHHHH----HHCCCCCHHHHHCCCCCCCHHCCCCCCCHHHHHCCCCCCCCCCCCCC
Q ss_conf             30699399983036542012334677775----20112221221101457410001232214443015664433211212
Q gi|254781101|r  104 LRSKATIIAITGSVGKTTTKEMLTIALSS----IKKTYACIGSYNNHIGVPLTLARMPVDVDFGIFELGMSHLGEIRFLT  179 (472)
Q Consensus       104 ~~~~~~vI~ITGTnGKTTt~~~l~~iL~~----~~~~~~t~gn~Nn~iGvpltll~~~~~~~~~V~E~g~~~~gei~~L~  179 (472)
T Consensus       587 ~~~~~~vIgITGSnGKTTTKeml~~iLs~~~~~~~~v~~t~gN~NN~iGvPltll~l~~~~~~aVlEmGms~~GEI~~L~  666 (953)
T PRK11929        587 SSFSLPVIAITGSNGKTTTKEMIAAILAQWQGDDGRVTATEGNFNNEIGVPLTLLRLRARHRAAVFELGMNHPGEIARLA  666 (953)
T ss_pred             HHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHCCCCCCHHHHHHHCCCCCCHHHHHH
T ss_conf             75799789996788507899999999985177784388556743786667178757996346578765289622699860


Q ss_pred             CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             23232202555312101234445788886543310376221012101342468998752012333332222222222222
Q gi|254781101|r  180 HLVRPHIAVITTIAPAHLSNFSGIEEIASAKAEIFEGLEKTGTIFLNYDDSFFELLKAKSHALGIKTIYSFGKSKNADFQ  259 (472)
Q Consensus       180 ~i~~P~iaiiTNI~~dHld~~~s~e~i~~~K~~i~~~l~~~g~~ViN~Dd~~~~~l~~~~~~~~~~~i~~~g~~~~ad~~  259 (472)
T Consensus       667 ~i~~PdiaVITNIg~aHLe~fgs~e~Ia~aK~eIf~~l~~~g~aIlN~DD~~~~~~~~~~~~~~i-~~fg~~~~~~adi~  745 (953)
T PRK11929        667 AIAAPTVALVTNAQREHQEFLHSVEAVARANGALINALPEDGIAVVNGDDPYAAIWAKLAGARRV-LRFGLSLQPGLDVY  745 (953)
T ss_pred             CCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCE-EEEEECCCCCCCEE
T ss_conf             62589778874456998766189999999999998315879799993886889999998457875-99985258987689


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCCE
Q ss_conf             34421134651001245654322122222222333322103567651012103455431147664433101000365311
Q gi|254781101|r  260 LRKWKQCSEQSWMEVQLQGKSMEVVHHGIGYHMAQNMLMTLGIVSILTADVDTAIKALSVFHPKEGRGKRYRCALNQGFF  339 (472)
Q Consensus       260 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~G~hnv~NalaAia~~~~lGi~~~~i~~~L~~~~~~~GR~~~~~~~~~~~~~  339 (472)
T Consensus       746 ~~~i~~~~~g~~~~~~~~~~~~~v~l~l~G~hnv~NaLaAiAva~~lGi~~~~i~~~L~~~~~~~gR~e~~~~---~~g~  822 (953)
T PRK11929        746 AEDIVTQAAGTLCFVVTPAGSAYVDLPVPGEHNLRNALAAIAIGLAAGAPLHQIIAALEGFQAVKGRMQRRQL---SDGT  822 (953)
T ss_pred             EEEEEECCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEE---CCCE
T ss_conf             9998986896499999789569999568979999999999999999399999999998669999998789995---7997


Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCC
Q ss_conf             33100025653210125777874111026871388512354171058999999999986499899998803898998511
Q gi|254781101|r  340 TLIDESYNANPASMKAAISVLSQISPHGEGRRIAVLGDMCEMGELSQSFHIDLAEVLSLYNISHVWLSGFHVLALKDALP  419 (472)
Q Consensus       340 ~iIDDsYNAnP~S~~aal~~l~~~~~~~~~r~i~VlG~m~ELG~~~~~~h~~i~~~~~~~~~d~v~~~G~~~~~~~~~~~  419 (472)
T Consensus       823 ~iIDDsYNANP~Sm~aAl~~L~~~~---~~~kiaVLGdM~ELG~~s~~~H~~ig~~~~~~~id~v~~vG~~~~~~~~~~~  899 (953)
T PRK11929        823 VIIDDTYNANPDSMRAAIDVLARLP---GPKRALVLGDMLELGDNGPAMHREVGDYAREHSIDALITLGEASRDAAHAFG  899 (953)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHCCC---CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCC
T ss_conf             9999784888999999999985287---9986999848500245789999999999997599999998657999986568


Q ss_pred             CCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             37979997898999999998447898999977132548999999998
Q gi|254781101|r  420 RSIHVHYSETMDGLFLFIQSSLVDGDVVVVKSSNSCGFYRLINLLLE  466 (472)
Q Consensus       420 ~~~~~~~~~~~e~a~~~l~~~~~~gdiVLiKGSr~~~le~iv~~L~~  466 (472)
T Consensus       900 ~~-~~~~~~~~~~l~~~L~~~l~~~d~VLVKGSR~m~lE~iV~~l~~  945 (953)
T PRK11929        900 KA-ARACFASVDEIIAALRGLLPSSDIVLIKGSRFMRLERVVTAFST  945 (953)
T ss_pred             CC-CEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf             46-57883999999999985589999999971560469999999972